bioWidgets BlastView demo - TBLASTN

BlastView TBLASTN Demo

This page launches a Java(tm) applet which demonstrates CBIL's BlastView application displaying TBLASTN results. Here is the TBLASTN result in the standard text-based format.

Query Sequence: GTP binding protein

Target Database: DOTS (Database of Transcribed Sequences) consensus sequences.

Browser Compatibility

The bioWidgets Java software has been tested on:

UNIX: Netscape Communicator 4.06, 4.08 and 4.5
MS-Windows: Netscape Communicator 4.5; Internet Explorer 4.0
Macintosh: Not supported (Communicator 4.5 and IE 4.5 JVMs are inadequate).

JavaBeans(tm) Architecture

Here is a set of images showing the JavaBeans(tm) design of BlastView as created in the JavaStudio application builder tool.

BlastView is constructed from CBIL's Map Widget, Multi-Alignment Widget and a number of supporting JavaBeans(tm). All of its components communicate via the standard Beans event model.

Licensing

AnnotView, BlastView and all of the Java(tm) source code and executables that comprise them, with the exception of the executables provided by ORO Inc. (PerlTools for Java), are the property of and copyrighted by the Trustees of the University of Pennsylvania.

Unlicensed copying is prohibited.

To obtain a license (academic or commercial) for BlastView and/or its constituent parts, contact bioWidgets@pcbi.upenn.edu.

As of release 2.1.0, we will provide source code as well as executables to academic licensees.

Copyright, 1998 
Trustees of the University of Pennsylvania.  
All rights reserved

This work is funded by the U.S. National Institutes of Health, grant 5-1201-HG01450 and the U.S. Department of Energy, grant DEFOG02-94ER61923

All queries should be directed to bioWidgets@pcbi.upenn.edu
Contents by Brian Brunk, Jonathan Crabtree, Steve Fischer, Mark Gibson.