Notice: The information contained on this page is obsolete, and may reference projects which have been discontinued.
Some or all functionality may not behave properly.
Caveat Lector!

CBIL bioWidgets Demo: BlastView demos

BlastView Demos

Click on one of the following links to launch a BlastView demo.

A BLAST query using your own sequence.
Alert: the example links below invoke a large Java applet.
Example 1:
- BLASTX
- Query Sequence: Lipoxygenase 5' EST
- Target Database: NRDB (GenBank Non-redundant Protein Database)
Example 2:
- BLASTN
- Query Sequence: Lipoxygenase 5' EST
- Target Database: dbEST
Example 3:
- BLASTP
- Query Sequence: Lipoxygenase protein
- Target Database: NRDB.
Example 4:
- TBLASTN
- Query Sequence: Lipoxygenase protein
- Target Database: dbEST
Example 5:
- BLASTX
- Query Sequence: Genomic globin locus (with five genes)
- Target Database: SwissProt
Example 6:
- BLASTX
- Query Sequence: DOTS (Database of Transcribed Sequences) consensus sequence releated to a GTP binding protein.
- Target Database: Genbank NRDB (Non-redundant protein database).
Example 7:
- BLASTN
- Query Sequence: Lipoxygenase 5' EST
- Target Database: DOTS (Database of Transcribed Sequences) consensus sequences
Example 8:
- TBLASTN
- Query Sequence: Lipoxygenase protein
- Target Database: DOTS consensus sequences.
Example 9:
- TBLASTN
- Query Sequence: GTP binding protein
- Target Database: DOTS consensus sequences.
Example 10:
- BLASTX
- Query Sequence: Novel cDNA differentially expressed in fetal erythroblast
- Target Database: EpoDB.

All queries should be directed to bioWidgets@pcbi.upenn.edu
Contents by Brian Brunk, Jonathan Crabtree, Steve Fischer, Mark Gibson.