CBIL bioWidgets for Java<sup><font size=-2>TM</font></sup> JavaStudioTM Design for BlastView_inferred CBIL Home Page

BlastView_inferred: Computes a multiple alignment based on pairwise BLAST alignments.


A subcomponent of the BlastView_align composite bean. It implements the first alignment method provided by BlastView, an "inferred" multiple alignment computed solely using the pairwise alignments reported by BLAST. The MultiAlignWidgetFrame is used to display the alignment and if the user decides to follow up with a full ClustalW alignment, it notifies the SequenceListExporter to output the list of sequences for this purpose.


All queries should be directed to bioWidgets@www.cbil.upenn.edu
Contents by Brian Brunk, Jonathan Crabtree, Steve Fischer, Mark Gibson, Michael Sargent.