alignments/CPlasFal_156.align.Z


1.  Plasmodium falciparum NF54 (D.A.Fidock)
2. cbsPfHB3.1, Debopam Chakrabarti
3. czapPFDd2.1, Debopam Chakrabarti
4. gmbPfHB3.1, G. Roman Reddy
Library numbers are appended to the dbEST_ID with _# +/- indicates the orientation of each clone.

******************* Contig 156 ******************** . : . : . : . : . : . : 1200527_4+ TGTAGACATATTCCTTTTTGGATTAATATAATTGTATTAATCATCAATTAATGTATTATC 60 504282_4+ TTGTATTAATCATCACNTAATGTATTATC 29 ____________________________________________________________ consensus TGTAGACATATTCCTTTTTGGATTAATATAATTGTATTAATCATCAATTAATGTATTATC 60 . : . : . : . : . : . : 1200527_4+ ATTTTCCTCATACTTTTCACGATTATAATTTTTTATATAATCAAAAATTGT-ACAAATTT 119 504282_4+ ATTTTCCTCATACTTTTCATGATTATTATTTTTTATATAATCAAGAATCGNGA-AAATGG 88 ____________________________________________________________ consensus ATTTTCCTCATACTTTTCACGATTATAATTTTTTATATAATCAAAAATCGTGACAAATGG 120 . : . : . : . : . : . : 1200527_4+ TCAAAATGATTATCATCTGTTATATAAGTGTTTTCCACATTTTATTATTTTCATCAAAAT 179 504282_4+ NGAAAATAATTATCATCTGTTATATAAGTGTNTCCCACATTTTATTATTTCCATCAAAAT 148 ____________________________________________________________ consensus TCAAAATAATTATCATCTGTTATATAAGTGTTTCCCACATTTTATTATTTCCATCAAAAT 180 . : . : . : . : . : . : 1200527_4+ GTAAATCTATAGATATATTTGTG-AGTAAATTTTTTGTTTGAAAAATGTTATTGTTGTAA 238 504282_4+ GTNANTCTATAGATATATGNGGGGAGTAAATNTGGTGGGTGANAAATGTTATTGTTGGCA 208 ____________________________________________________________ consensus GTAAATCTATAGATATATGTGGGGAGTAAATTTGGTGGGTGAAAAATGTTATTGTTGGAA 240 . : . : . : . : . : . : 1200527_4+ TATCATTATATGA-GATATTTGTTGATCCGAGATTATCAAGAGGAATTTTGTCATTATCA 297 504282_4+ TATCATTATAT-ATGATATNTGNNGGN 267 ____________________________________________________________ consensus TATCATTATATGATGATATTTGTTGATCCGAGATTATCAAGAGGAATTTTGTCATTATCA 300 . : . : . : . : . : . : 1200527_4+ TCTTGATAATATATATTGTTTGTACTTATCATATTATATGTTTCATCATTAATTTTATGA 357 ____________________________________________________________ consensus TCTTGATAATATATATTGTTTGTACTTATCATATTATATGTTTCATCATTAATTTTATGA 360 . : . : . : . : . : . : 1200527_4+ ATATCATCAAGAGTTGATGGGGGTGTATATTCAATATATTTTCATTATGATCCATAGTCC 417 ____________________________________________________________ consensus ATATCATCAAGAGTTGATGGGGGTGTATATTCAATATATTTTCATTATGATCCATAGTCC 420 . : . : . : . : . : . : 1200527_4+ ATTCTTCATTCAATTTATTTAACATATGTTCGTTATGGTTCAACTTTTCACACATATCTC 477 ____________________________________________________________ consensus ATTCTTCATTCAATTTATTTAACATATGTTCGTTATGGTTCAACTTTTCACACATATCTC 480 . : . : . : . : . : . : 1200527_4+ TATGTCTGTCTATCCATTTATGAAATAGATTTAGTTGGTTCATTATAGGATCACTATGTG 537 ____________________________________________________________ consensus TATGTCTGTCTATCCATTTATGAAATAGATTTAGTTGGTTCATTATAGGATCACTATGTG 540 . : . : . : . : . : . : 1200527_4+ ATTGTTTGGCAAAACTATTAAAAGTCGTATTTTTAGTATTATTTGTTCCATATAATTCGT 597 ____________________________________________________________ consensus ATTGTTTGGCAAAACTATTAAAAGTCGTATTTTTAGTATTATTTGTTCCATATAATTCGT 600 . : . : . : . : . : . : 1200527_4+ TTTCTTTTAAGAACTTCATCATAAATATCAACATTATGGTTAGTACTTAGTGAAT 652 ____________________________________________________________ consensus TTTCTTTTAAGAACTTCATCATAAATATCAACATTATGGTTAGTACTTAGTGAAT 655

Date: 14:46:7 on Sun 17 Dec 117.