blastn_dbest_files/886509_blastn.Z


BLASTN 2.0a10MP-WashU [15-May-1997] [Build 16:56:41 May 19 1997]

Reference:  Gish, Warren (1994-1997).  unpublished.
Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J.
Lipman (1990).  Basic local alignment search tool.  J. Mol. Biol. 215:403-10.

Notice:  this program and its default parameter settings are optimized to find
nearly identical sequences rapidly.  To identify weak similarities encoded in
nucleic acid, use BLASTX, TBLASTN or TBLASTX.

Query=  886509
        (328 letters)

Database:  dbEST
           1,352,941 sequences; 500,351,318 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
  Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

A cbil|dbest|886509 AA247092 SW3ICA2194SK 5' Lib=282[Brugi...  1612  8.2e-67   1
A cbil|dbest|444799 N43314 SW3ICA861SK 5' Lib=282[Brugia_m...   789  1.2e-29   1
A cbil|dbest|470648 N64897 SW3ICA1362SK 5' Lib=282[Brugia_...   460  1.7e-29   2
A cbil|dbest|682580 AA056778 SWAMCA1509SK 5' Lib=281[Brugi...   592  6.4e-21   1
A cbil|dbest|1193882 AA547833 MB3D6V1F02T3 5' Lib=953[Brugi...   548  9.3e-19   1
A cbil|dbest|1404950 AA698366 HL04347.5prime 5prime Lib=105...   213  0.0036    1
A cbil|dbest|459876 N54340 yv35h02.s1 3' Lib=262[Homo_sapi...   196  0.010     1
A cbil|dbest|908759 AA267772 va18b11.r1 5' Lib=567[Mus_mus...   190  0.014     1
A cbil|dbest|1038121 AA396641 vb29d12.r1 5' Lib=567[Mus_mus...   190  0.014     1
A cbil|dbest|912738 AA271526 va83g09.r1 5' Lib=598[Mus_mus...   195  0.015     1
A cbil|dbest|912664 AA271451 va83b07.r1 5' Lib=598[Mus_mus...   195  0.017     1
A cbil|dbest|658848 AA043474 zk54e09.s1 3' Lib=474[Homo_sa...   186  0.021     1
A cbil|dbest|894901 AA253978 va09h09.r1 5' Lib=567[Mus_mus...   190  0.024     1
A cbil|dbest|1124337 AA479302 zv21f08.s1 3' Lib=589[Homo_sa...   186  0.035     1
A cbil|dbest|824766 AA185729 JM00M135.QM3 5' Lib=554[Schis...   170  0.14      1
A cbil|dbest|448823 D80755 HUM102C11A 3' Lib=394[Homo_sapi...   168  0.16      1
A cbil|dbest|487321 N80982 za12e07.r1 5' Lib=262[Homo_sapi...   160  0.36      1
A cbil|dbest|447798 D79693 HUM308B07B 5' Lib=395[Homo_sapi...   155  0.53      1
A cbil|dbest|32451 T12014 A827F  Lib=88[Homo_sap...   158  0.62      1
A cbil|dbest|706152 AA072469 SWAMCA1575SK 5' Lib=281[Brugi...   153  0.72      1
A cbil|dbest|453714 N48185 yz03d10.s1 3' Lib=390[Homo_sapi...   176  0.91      1
A cbil|dbest|1009063 AA367735 EST78886  Lib=740[Ho...   145  0.92      1
A cbil|dbest|1353404 AA649784 ns48b05.s1  Lib=881[...   163  0.94      1
A cbil|dbest|813315 AA174343 ms74g05.r1 5' Lib=553[Mus_mus...   175  0.94      1
A cbil|dbest|1303718 AA606017 fa14f04.s1 3' Lib=944[Danio_r...   172  0.98      1
A cbil|dbest|1155155 AA510515 vh54d09.r1 5' Lib=868[Mus_mus...   171  0.995     1
A cbil|dbest|922377 AA281459 zs96d03.s1 3' Lib=595[Homo_sa...   168  0.998     1
A cbil|dbest|444150 N42568 yy18f09.r1 5' Lib=367[Homo_sapi...   169  0.9994    1
A cbil|dbest|75483 D41410 RICS3891A  Lib=193[Ory...   137  0.9998    1
A cbil|dbest|1046574 AA405239 zt06e12.s1 3' Lib=595[Homo_sa...   145  0.99993   1



>cbil|dbest|886509 AA247092 SW3ICA2194SK 5' Lib=282[Brugia_malayi|||||]
            Length=377
            Length = 377

  Plus Strand HSPs:

 Score = 1612 (241.9 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 324/328 (98%), Positives = 324/328 (98%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTGATCAGTTTT 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTGATCAGTTTT 60

Query:    61 TATTCAACTAATTTACTTCCTTTCAAGAAAAACTAGCATATAAGACAATTGTTTTTACGG 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    61 TATTCAACTAATTTACTTCCTTTCAAGAAAAACTAGCATATAAGACAATTGTTTTTACGG 120

Query:   121 TAAATTTTTTCCGGATTTATCAATCGGATTTTGAANGCAGTAACGAAATTATTNTTTATA 180
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct:   121 TAAATTTTTTCCGGATTTATCAATCGGATTTTGAANGCAGTAACGAAATTATTNTTTATA 180

Query:   181 ACGAAATATATCATTTCGGCGTGCGGATTGCCGGATGGCGATGCCGCCGACATCCGCACC 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   181 ACGAAATATATCATTTCGGCGTGCGGATTGCCGGATGGCGATGCCGCCGACATCCGCACC 240

Query:   241 CGGGAAAATTCGATCATGATTCTTCCAGTGTTGATACTATAAATTTACGAATGATCTTAT 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   241 CGGGAAAATTCGATCATGATTCTTCCAGTGTTGATACTATAAATTTACGAATGATCTTAT 300

Query:   301 GATGGAAAGACAAAGAATTCCATTANNT 328
             |||||||||||||||||||||||||  |
Sbjct:   301 GATGGAAAGACAAAGAATTCCATTANNT 328


>cbil|dbest|444799 N43314 SW3ICA861SK 5' Lib=282[Brugia_malayi|||||] Length=400
            Length = 400

  Plus Strand HSPs:

 Score = 789 (118.4 bits), Expect = 1.2e-29, P = 1.2e-29
 Identities = 201/269 (74%), Positives = 201/269 (74%), Strand = Plus / Plus

Query:    56 GTTTTTATTCAACTAATTTACTTCCTTTCAAGAAAAACTAGCATATAAGACAATTGTTTT 115
             GTTT  ATTCAACTAATT ACTTCC    AAGAAAAACTA  ATATAA ACAATTGTT  
Sbjct:     1 GTTTCAATTCAACTAATTNACTTCCNAANAAGAAAAACTANTATATAANACAATTGTTGG 60

Query:   116 TACGGTAAATTTTTTCCGGATTTATCAATCGGATTTTGAANGCAGTAACGAAATTATTNT 175
              ACGGTAA T    TCC GAT  ATCAATCGG     GA  G AG AACGA ATTATT T
Sbjct:    61 GACGGTAANTNNCNTCCNGATNAATCAATCGGGNGNGGANAGNAGNAACGANATTATTAT 120

Query:   176 TTATAACGAAATATATCATTTCGGCGTGCGGATTGCCGGATGGCGATGCCGCCGACATCC 235
             TTATAACG   T TATCAT  CGG GTG GG T G CGGATGGCGA GCCG CG CATCC
Sbjct:   121 TTATAACGNNTTNTATCATGNCGGGGTGNGGNTNGNCGGATGGCGANGCCGNCGNCATCC 180

Query:   236 GCACCCGGGAAAATTCGATCATGATTCTTCCAGTGTTGATACTATAAATTTACGAATGAT 295
             GCA  CG  A A T CGATCA     CT CCAGTGT GATACTATAAAT TACGA TG T
Sbjct:   181 GCAGNCGN-ANANTCCGATCANNNNNCTGCCAGTGTNGATACTATAAATATACGATTGNT 239

Query:   296 CTTA-TGA-TGGAAAGACAAA-GAATTCCA 322
             CT A TGA TGGAAA ACAAA GAATT CA
Sbjct:   240 CTNAGTGAGTGGAAAAACAAACGAATTTCA 269


>cbil|dbest|470648 N64897 SW3ICA1362SK 5' Lib=282[Brugia_malayi|||||]
            Length=421
            Length = 421

  Plus Strand HSPs:

 Score = 460 (69.0 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
 Identities = 110/131 (83%), Positives = 110/131 (83%), Strand = Plus / Plus

Query:   198 GGCGTGCGGATTGCCGGATGGCGATGCCGCCGACATCCGCACCCGGGAAAATTCGATCAT 257
             GG GTG GGATTG CGGATGG GATGCCG CGACATCCGCA  CGG AAAAT CGATCAT
Sbjct:    97 GGNGTGNGGATTGNCGGATGGNGATGCCGNCGACATCCGCAGNCGG-AAAATNCGATCAT 155

Query:   258 GATTCTTCCAGTGTTGATACTATAAATTTACGAATGATCTTA-TGA-TGGAAAGACAAA- 314
             GAT CT CCAG GTTGATACTATAAAT TACGA TG TCTTA  GA TGGAAA ACAAA 
Sbjct:   156 GATNCTNCCAGNGTTGATACTATAAATNTACGATTGNTCTTAGNGAGTGGAAANACAAAA 215

Query:   315 GAATTCCA-TTA 325
             GAATT CA TTA
Sbjct:   216 GAATTTCAATTA 227

 Score = 361 (54.2 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
 Identities = 77/84 (91%), Positives = 77/84 (91%), Strand = Plus / Plus

Query:     4 AATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTGATCAGTTTTTAT 63
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||   |
Sbjct:    13 AACCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTGATCAGTTTCNNT 72

Query:    64 TCAACTAATTTACTTCCTTTCAAG 87
             ||||||||||||||||||  || |
Sbjct:    73 TCAACTAATTTACTTCCTAGCAGG 96

 Score = 141 (21.2 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
 Identities = 35/42 (83%), Positives = 35/42 (83%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAAT 42
             A CAATCAATC ATCA TCAATCAATCGATCA T A TCA T
Sbjct:    26 ATCAATCAATCGATCATTCAATCAATCGATCAGTGA-TCAGT 66


>cbil|dbest|682580 AA056778 SWAMCA1509SK 5' Lib=281[Brugia_malayi|||||]
            Length=569
            Length = 569

  Plus Strand HSPs:

 Score = 592 (88.8 bits), Expect = 6.4e-21, P = 6.4e-21
 Identities = 166/198 (83%), Positives = 166/198 (83%), Strand = Plus / Plus

Query:   139 ATCAATCGGATT-TTGAANGCAGTA-A-C-GAAATTATTNTTTAT--AACGAAAT-ATAT 191
             ATCAATCG AT  TT AA  CA T  A C G  AT A T TTTAT  AAC AA T A  T
Sbjct:    30 ATCAATCG-ATCATTCAAT-CAATCGATCAGTGATCAGTTTTTATTCAACTAATTTACTT 87

Query:   192 CATTTC---GGCGTGCGGATTGCCGGATGGCGATGCCGCCGACATCCGCACCCGGGAAAA 248
             C TTTC   GGCGTGCGGATTGCCGGATGGCGATGCCGCCGACATCCGCA CCGG AAAA
Sbjct:    88 CCTTTCAAGGGCGTGCGGATTGCCGGATGGCGATGCCGCCGACATCCGCAGCCGG-AAAA 146

Query:   249 TTCGATCATGATTCTTCCAGTGTTGATACTATAAATTTACGAATGATCTTA-TGA-TGGA 306
             TTCGATCATGATTCTTCCAGTGTTGATACTATAAATTTACGA TGATCTTA TGA TGGA
Sbjct:   147 TTCGATCATGATTCTTCCAGTGTTGATACTATAAATTTACGATTGATCTTAGTGAGTGGA 206

Query:   307 AAGACAAA-GAATTCCA-TTA 325
             AAGACAAA GAATT CA TTA
Sbjct:   207 AAGACAAAAGAATTTCAATTA 227

 Score = 588 (88.2 bits), Expect = 9.7e-21, P = 9.7e-21
 Identities = 162/198 (81%), Positives = 162/198 (81%), Strand = Plus / Plus

Query:   139 ATCAATCGGATTTTGAANGCAGTAA-C-GAAATTATTNTTTAT--AACGAAAT-ATATCA 193
             ATCAATCG    TT AA   A   A C G  AT A T TTTAT  AAC AA T A  TC 
Sbjct:    30 ATCAATCGATCATTCAATCAATCGATCAGTGATCAGTTTTTATTCAACTAATTTACTTCC 89

Query:   194 TTTC--GG-CGTGCGGATTGCCGGATGGCGATGCCGCCGACATCCGCACCCGGGAAAATT 250
             TTTC  GG CGTGCGGATTGCCGGATGGCGATGCCGCCGACATCCGCA CCGG AAAATT
Sbjct:    90 TTTCAAGGGCGTGCGGATTGCCGGATGGCGATGCCGCCGACATCCGCAGCCGG-AAAATT 148

Query:   251 CGATCATGATTCTTCCAGTGTTGATACTATAAATTTACGAATGATCTTA-TGA-TGGAAA 308
             CGATCATGATTCTTCCAGTGTTGATACTATAAATTTACGA TGATCTTA TGA TGGAAA
Sbjct:   149 CGATCATGATTCTTCCAGTGTTGATACTATAAATTTACGATTGATCTTAGTGAGTGGAAA 208

Query:   309 GACAAA-GAATTCCA-TTA 325
             GACAAA GAATT CA TTA
Sbjct:   209 GACAAAAGAATTTCAATTA 227

 Score = 388 (58.2 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 80/84 (95%), Positives = 80/84 (95%), Strand = Plus / Plus

Query:     4 AATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTGATCAGTTTTTAT 63
             || || ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    13 AACCATTCANTCANTCAATCAATCGATCATTCAATCAATCGATCAGTGATCAGTTTTTAT 72

Query:    64 TCAACTAATTTACTTCCTTTCAAG 87
             ||||||||||||||||||||||||
Sbjct:    73 TCAACTAATTTACTTCCTTTCAAG 96


>cbil|dbest|1193882 AA547833 MB3D6V1F02T3 5'
            Lib=953[Brugia_malayi|||||third_stage_larvae,_six_days_after_infect
            ion] Length=382
            Length = 382

  Plus Strand HSPs:

 Score = 548 (82.2 bits), Expect = 9.3e-19, P = 9.3e-19
 Identities = 126/138 (91%), Positives = 126/138 (91%), Strand = Plus / Plus

Query:   191 TCATTTCGGCGTGCGGATTGCCGGATGGCGATGCCGCCGACATCCGCACCCGGGAAAATT 250
             TCATTTCGGCGTGCGGATTGCCGGA GGCGATGCCGCCGACATCCGCA CCGG AAAATT
Sbjct:     1 TCATTTCGGCGTGCGGATTGCCGGACGGCGATGCCGCCGACATCCGCAGCCGG-AAAATT 59

Query:   251 CGATCATGATTCTTCCAGTGTTGATACTATAAATTTACGAATGATCTTA-TGA-TGGAAA 308
              GATCATGATTCTTCC  TGTTGATACTATAAATTTACGA TGATCTTA TGA TGGAAA
Sbjct:    60 TGATCATGATTCTTCCGATGTTGATACTATAAATTTACGATTGATCTTAGTGAGTGGAAA 119

Query:   309 GAC-AAAGAATTCCA-TTA 325
              AC AAAGAATT CA TTA
Sbjct:   120 AACTAAAGAATTTCAATTA 138


>cbil|dbest|1404950 AA698366 HL04347.5prime 5prime
            Lib=1056[Drosophila_melanogaster|head--brain_&_sensory_organ||||adu
            lt] Length=729
            Length = 729

  Plus Strand HSPs:

 Score = 213 (32.0 bits), Expect = 0.0036, P = 0.0036
 Identities = 83/124 (66%), Positives = 83/124 (66%), Strand = Plus / Plus

Query:     7 CAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTGATCAGTTTTTATTCA 66
             CAATCAATCAATCAA CAATC ATCA TCAATCAATC AT  GT  TCA TT  T  T A
Sbjct:   217 CAATCAATCAATCAACCAATCAATCAATCAATCAATCAATGGGTTCTCATTTGGTGGTTA 276

Query:    67 ACTAATTTACTTC-CTTTCAAGAAAAACTAGCATATAAGACAATTGTTTTTACGGTAA-A 124
             A TA T  A TTC C TTCA      A   G  T T AG    TTGT TTT C  TAA A
Sbjct:   277 ATTATTGCA-TTCGCATTCATTTCCTAGCGGTGTGTGAGTTGCTTGTATTT-CA-TAATA 333

Query:   125 TTTTTT 130
             TTTTTT
Sbjct:   334 TTTTTT 339

 Score = 192 (28.8 bits), Expect = 0.035, P = 0.034
 Identities = 96/149 (64%), Positives = 96/149 (64%), Strand = Plus / Plus

Query:     2 ACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGAT---CAGT-GATCAGT 57
             ACAATCAATCAATCAA CAATCAATC ATCA TCAATCAAT G T   CA T G T  GT
Sbjct:   216 ACAATCAATCAATCAACCAATCAATCAATCAATCAATCAATGGGTTCTCATTTGGTG-GT 274

Query:    58 TT-TTATT-CAA-CTAATTTACTTCCTTTCAA-GAAAAACTAGCATATAAGACA--ATTG 111
             T  TTATT CA  C  ATT A TTCCT  C   G    A T GC T TA   CA  AT  
Sbjct:   275 TAATTATTGCATTCGCATTCATTTCCTAGCGGTGTGTGAGTTGCTTGTATTTCATAATAT 334

Query:   112 TTTTTACGGTAA-ATTTTTTCCGGATTTAT 140
             TTTTTA   T   A TTT T  GG TTT T
Sbjct:   335 TTTTTATTCTTTGAGTTTCTGTGGCTTTGT 364


>cbil|dbest|459876 N54340 yv35h02.s1 3'
            Lib=262[Homo_sapiens|Liver_and_Spleen||||20_week-post_conception_fe
            tus] Length=446 Author_cmt: contains element L1 repetitive element
            ;
            Length = 446

  Plus Strand HSPs:

 Score = 196 (29.4 bits), Expect = 0.010, P = 0.010
 Identities = 58/76 (76%), Positives = 58/76 (76%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTGATCAGTTTT 60
             A CAATCA TCAATCAATCAATCAATC A CA  CAA CAA C A CAG GA  AGTTT 
Sbjct:   151 ATCAATCAGTCAATCAATCAATCAATCAAGCAAGCAAGCAAGCAAACAGAGAGAAGTTTA 210

Query:    61 -TATTCAA-CTAATTTA 75
              TAT CAA CT ATT A
Sbjct:   211 CTAT-CAAGCTTATTCA 226

 Score = 187 (28.1 bits), Expect = 0.029, P = 0.029
 Identities = 97/142 (68%), Positives = 97/142 (68%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTGATCAGTTTT 60
             A CAATCA TCAATCAATCAATCAATC A CA  CAA CAA C A CAG GA  AGTTT 
Sbjct:   151 ATCAATCAGTCAATCAATCAATCAATCAAGCAAGCAAGCAAGCAAACAGAGAGAAGTTT- 209

Query:    61 TATTCAACTAATTTACTTCCTTTCAAGAA--AAACTAGCATATAAGACAATTGTTTTTAC 118
              A T A C AA    CTT   TTCAAGA   AAACT GC T T AGA AA  GT   T  
Sbjct:   210 -ACT-ATC-AAG---CTTA--TTCAAGATTGAAACTGGCCTGTTAGAGAAA-GTGGCT-- 258

Query:   119 GGTAAATT-TTT-TCCGGATTTATCA 142
             G T A TT TTT TCC  ATTT TCA
Sbjct:   259 G-TCACTTCTTTCTCCTAATTTCTCA 283


>cbil|dbest|908759 AA267772 va18b11.r1 5'
            Lib=567[Mus_musculus|lymph_node|lymph_node|||4_weeks] Length=401
            Length = 401

  Minus Strand HSPs:

 Score = 190 (28.5 bits), Expect = 0.014, P = 0.014
 Identities = 66/93 (70%), Positives = 66/93 (70%), Strand = Minus / Plus

Query:    93 GTTT-TTCTTGAAAG-GAAGTAAATTAGTTGAATAAAAACTGATCACTGATCGATTGATT 36
             GTTT TTCT  A    G AG  A TTA  T   TA AAA T  T   T A  GATTGATT
Sbjct:     7 GTTTCTTCTGTATTTTGGAGCGATTTATATATCTAGAAAATAGTTTTTAA--GATTGATT 64

Query:    35 GAATGATCGATTGATTGATTGATTGATTGATTGTT 1
             GA TGAT GATTGATTGATTGATTGATTGATT TT
Sbjct:    65 GATTGATTGATTGATTGATTGATTGATTGATTTTT 99

 Score = 187 (28.1 bits), Expect = 0.021, P = 0.020
 Identities = 67/97 (69%), Positives = 67/97 (69%), Strand = Minus / Plus

Query:    98 TGCTAGTTTTTCTTGAAAGGAAGTAAATTAGTTGAATAAAAACTGATCACTGATCGATTG 39
             T CT  T T T TTG A  GA  TA AT   T GAA  AA A T  T A  GAT GATTG
Sbjct:     9 TTCTTCTGTATTTTGGAGCGATTTATATATCTAGAA--AATAGTTTTTAA-GATTGATTG 65

Query:    38 ATTGAATGATCGATTGATTGATTGATTGATTGAT-TGT 2
             ATTGA TGAT GATTGATTGATTGATTGATT  T TGT
Sbjct:    66 ATTGATTGATTGATTGATTGATTGATTGATTTTTATGT 103

 Score = 176 (26.4 bits), Expect = 1.4, P = 0.77
 Identities = 68/97 (70%), Positives = 68/97 (70%), Strand = Minus / Plus

Query:    98 TGCTAGTTTTTCTTGAAAGGAAGTAAATTAGTTGAATAAAAACTGATCACTGATCGATTG 39
             T CT  T T T TTG A  GA  TA AT   T GAA AA A  T  T A  GAT GATTG
Sbjct:     9 TTCTTCTGTATTTTGGAGCGATTTATATATCTAGAA-AATAGTTTTTAA--GATTGATTG 65

Query:    38 ATTGAATGATCGATTGATTGATTGATTGATTG--AT-TGT 2
             ATTGA TGAT GATTGATTGATTGATTGATT   AT TGT
Sbjct:    66 ATTGATTGATTGATTGATTGATTGATTGATTTTTATGTGT 105


>cbil|dbest|1038121 AA396641 vb29d12.r1 5'
            Lib=567[Mus_musculus|lymph_node|lymph_node|||4_weeks] Length=374
            Length = 374

  Minus Strand HSPs:

 Score = 190 (28.5 bits), Expect = 0.014, P = 0.014
 Identities = 66/93 (70%), Positives = 66/93 (70%), Strand = Minus / Plus

Query:    93 GTTT-TTCTTGAAAG-GAAGTAAATTAGTTGAATAAAAACTGATCACTGATCGATTGATT 36
             GTTT TTCT  A    G AG  A TTA  T   TA AAA T  T   T A  GATTGATT
Sbjct:     7 GTTTCTTCTGTATTTTGGAGCGATTTATATCTCTAGAAAATAGTTTTTAA--GATTGATT 64

Query:    35 GAATGATCGATTGATTGATTGATTGATTGATTGTT 1
             GA TGAT GATTGATTGATTGATTGATTGATT TT
Sbjct:    65 GATTGATTGATTGATTGATTGATTGATTGATTTTT 99

 Score = 187 (28.1 bits), Expect = 0.019, P = 0.019
 Identities = 67/97 (69%), Positives = 67/97 (69%), Strand = Minus / Plus

Query:    98 TGCTAGTTTTTCTTGAAAGGAAGTAAATTAGTTGAATAAAAACTGATCACTGATCGATTG 39
             T CT  T T T TTG A  GA  TA AT   T GAA  AA A T  T A  GAT GATTG
Sbjct:     9 TTCTTCTGTATTTTGGAGCGATTTATATCTCTAGAA--AATAGTTTTTAA-GATTGATTG 65

Query:    38 ATTGAATGATCGATTGATTGATTGATTGATTGAT-TGT 2
             ATTGA TGAT GATTGATTGATTGATTGATT  T TGT
Sbjct:    66 ATTGATTGATTGATTGATTGATTGATTGATTTTTATGT 103

 Score = 176 (26.4 bits), Expect = 1.1, P = 0.67
 Identities = 68/97 (70%), Positives = 68/97 (70%), Strand = Minus / Plus

Query:    98 TGCTAGTTTTTCTTGAAAGGAAGTAAATTAGTTGAATAAAAACTGATCACTGATCGATTG 39
             T CT  T T T TTG A  GA  TA AT   T GAA AA A  T  T A  GAT GATTG
Sbjct:     9 TTCTTCTGTATTTTGGAGCGATTTATATCTCTAGAA-AATAGTTTTTAA--GATTGATTG 65

Query:    38 ATTGAATGATCGATTGATTGATTGATTGATTG--AT-TGT 2
             ATTGA TGAT GATTGATTGATTGATTGATT   AT TGT
Sbjct:    66 ATTGATTGATTGATTGATTGATTGATTGATTTTTATGTGT 105


>cbil|dbest|912738 AA271526 va83g09.r1 5' Lib=598[Mus_musculus||Liver|||]
            Length=507 Author_cmt: gb:X13588 Murine crp gene for C-reactive
            protein (MOUSE);
            Length = 507

  Plus Strand HSPs:

 Score = 195 (29.3 bits), Expect = 0.016, P = 0.015
 Identities = 97/154 (62%), Positives = 97/154 (62%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTG-ATCAGTTT 59
             A CAATCAATCAATCAATC ATC ATC ATC  TC ATC ATC ATC  T  ATC  T T
Sbjct:   104 ATCAATCAATCAATCAATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT 163

Query:    60 TTAT-TCAACTAATTTA-CTTCCTTTCAAGAAAAA-CTAGCATA-TAAG-ACAATT-GTT 113
              T T TC AC  AT TA C TC  TTCA  A   A C A C TA T A  ACA TT GT 
Sbjct:   164 ATCTATCTACCTATCTATCATCTATTCATCAGTCATCCATCTTACTGATTACATTTAGTG 223

Query:   114 TTTACGGTAAATTTTTTCCGGATTTATCAATCGGAT 149
              TT   GTA  TTT TT   GA T   CA T GGAT
Sbjct:   224 CTTCTTGTAT-TTTGTTGAAGACTGGACACT-GGAT 257

 Score = 194 (29.1 bits), Expect = 0.018, P = 0.017
 Identities = 64/86 (74%), Positives = 64/86 (74%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTG-ATCAGTTT 59
             A CAATCAATCAATCAATCAATCAATC ATC  TC ATC ATC ATC  T  ATC  T T
Sbjct:    96 ATCAATCAATCAATCAATCAATCAATCTATCTATCTATCTATCTATCTATCTATC--TAT 153

Query:    60 TTATTCAACTAATTTA-CTTCCTTTCAA 86
              TAT  A CTA T TA CT CCT TC A
Sbjct:   154 CTATCTATCTA-TCTATCTACCTATCTA 180

 Score = 190 (28.5 bits), Expect = 0.028, P = 0.027
 Identities = 64/88 (72%), Positives = 64/88 (72%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTG-ATCAGTTT 59
             A CAATCAATCAATCAATCAATCAATC ATC  TC ATC ATC ATC  T  ATC  T T
Sbjct:    96 ATCAATCAATCAATCAATCAATCAATCTATCTATCTATCTATCTATCTATCTATCTATCT 155

Query:    60 TTAT-TCAA-CTAATTTACTTC-CTTTCA 85
              T T TC A CTA T TAC T  CT TCA
Sbjct:   156 ATCTATCTATCTA-TCTACCTATCTATCA 183


>cbil|dbest|912664 AA271451 va83b07.r1 5' Lib=598[Mus_musculus||Liver|||]
            Length=535 Author_cmt: gb:X13588 Murine crp gene for C-reactive
            protein (MOUSE);
            Length = 535

  Plus Strand HSPs:

 Score = 195 (29.3 bits), Expect = 0.017, P = 0.017
 Identities = 97/154 (62%), Positives = 97/154 (62%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTG-ATCAGTTT 59
             A CAATCAATCAATCAATC ATC ATC ATC  TC ATC ATC ATC  T  ATC  T T
Sbjct:   163 ATCAATCAATCAATCAATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT 222

Query:    60 TTAT-TCAACTAATTTA-CTTCCTTTCAAGAAAAA-CTAGCATA-TAAG-ACAATT-GTT 113
              T T TC AC  AT TA C TC  TTCA  A   A C A C TA T A  ACA TT GT 
Sbjct:   223 ATCTATCTACCTATCTATCATCTATTCATCAGTCATCCATCTTACTGATTACATTTAGTG 282

Query:   114 TTTACGGTAAATTTTTTCCGGATTTATCAATCGGAT 149
              TT   GTA  TTT TT   GA T   CA T GGAT
Sbjct:   283 CTTCTTGTAT-TTTGTTGAAGACTGGACACT-GGAT 316

 Score = 194 (29.1 bits), Expect = 0.019, P = 0.019
 Identities = 64/86 (74%), Positives = 64/86 (74%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTG-ATCAGTTT 59
             A CAATCAATCAATCAATCAATCAATC ATC  TC ATC ATC ATC  T  ATC  T T
Sbjct:   155 ATCAATCAATCAATCAATCAATCAATCTATCTATCTATCTATCTATCTATCTATC--TAT 212

Query:    60 TTATTCAACTAATTTA-CTTCCTTTCAA 86
              TAT  A CTA T TA CT CCT TC A
Sbjct:   213 CTATCTATCTA-TCTATCTACCTATCTA 239

 Score = 190 (28.5 bits), Expect = 0.030, P = 0.030
 Identities = 64/88 (72%), Positives = 64/88 (72%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTG-ATCAGTTT 59
             A CAATCAATCAATCAATCAATCAATC ATC  TC ATC ATC ATC  T  ATC  T T
Sbjct:   155 ATCAATCAATCAATCAATCAATCAATCTATCTATCTATCTATCTATCTATCTATCTATCT 214

Query:    60 TTAT-TCAA-CTAATTTACTTC-CTTTCA 85
              T T TC A CTA T TAC T  CT TCA
Sbjct:   215 ATCTATCTATCTA-TCTACCTATCTATCA 242


>cbil|dbest|658848 AA043474 zk54e09.s1 3' Lib=474[Homo_sapiens|uterus||||adult]
            Length=381
            Length = 381

  Minus Strand HSPs:

 Score = 186 (27.9 bits), Expect = 0.021, P = 0.021
 Identities = 60/80 (75%), Positives = 60/80 (75%), Strand = Minus / Plus

Query:    81 AGGAAGTAAATTAGTTG-AATAAAAACTGATCACTGATCGATTGATTGAATG-A-TC-GA 26
             AG  A TA A TA TT  AA  A AA   ATCAC G T GATTGATTGAATG A T  GA
Sbjct:   248 AGTTACTATAGTATTTCTAAGCATAATCAATCACAGCT-GATTGATTGAATGCAATGTGA 306

Query:    25 TTGATTGATTGATTGATTGAT 5
             TTGATTGATTGATTGATTGAT
Sbjct:   307 TTGATTGATTGATTGATTGAT 327


>cbil|dbest|894901 AA253978 va09h09.r1 5'
            Lib=567[Mus_musculus|lymph_node|lymph_node|||4_weeks] Length=214
            Length = 214

  Minus Strand HSPs:

 Score = 190 (28.5 bits), Expect = 0.025, P = 0.024
 Identities = 66/93 (70%), Positives = 66/93 (70%), Strand = Minus / Plus

Query:    93 GTTT-TTCTTGAAAG-GAAGTAAATTAGTTGAATAAAAACTGATCACTGATCGATTGATT 36
             GTTT TTCT  A    G AG  A TTA  T   TA AAA T  T   T A  GATTGATT
Sbjct:     7 GTTTCTTCTGTATTTTGGAGCGATTTATATATCTAGAAAATAGTTTTTAA--GATTGATT 64

Query:    35 GAATGATCGATTGATTGATTGATTGATTGATTGTT 1
             GA TGAT GATTGATTGATTGATTGATTGATT TT
Sbjct:    65 GATTGATTGATTGATTGATTGATTGATTGATTTTT 99

 Score = 187 (28.1 bits), Expect = 0.033, P = 0.033
 Identities = 67/97 (69%), Positives = 67/97 (69%), Strand = Minus / Plus

Query:    98 TGCTAGTTTTTCTTGAAAGGAAGTAAATTAGTTGAATAAAAACTGATCACTGATCGATTG 39
             T CT  T T T TTG A  GA  TA AT   T GAA  AA A T  T A  GAT GATTG
Sbjct:     9 TTCTTCTGTATTTTGGAGCGATTTATATATCTAGAA--AATAGTTTTTAA-GATTGATTG 65

Query:    38 ATTGAATGATCGATTGATTGATTGATTGATTGAT-TGT 2
             ATTGA TGAT GATTGATTGATTGATTGATT  T TGT
Sbjct:    66 ATTGATTGATTGATTGATTGATTGATTGATTTTTATGT 103

 Score = 176 (26.4 bits), Expect = 0.11, P = 0.10
 Identities = 68/97 (70%), Positives = 68/97 (70%), Strand = Minus / Plus

Query:    98 TGCTAGTTTTTCTTGAAAGGAAGTAAATTAGTTGAATAAAAACTGATCACTGATCGATTG 39
             T CT  T T T TTG A  GA  TA AT   T GAA AA A  T  T A  GAT GATTG
Sbjct:     9 TTCTTCTGTATTTTGGAGCGATTTATATATCTAGAA-AATAGTTTTTAA--GATTGATTG 65

Query:    38 ATTGAATGATCGATTGATTGATTGATTGATTG--AT-TGT 2
             ATTGA TGAT GATTGATTGATTGATTGATT   AT TGT
Sbjct:    66 ATTGATTGATTGATTGATTGATTGATTGATTTTTATGTGT 105

 Score = 153 (23.0 bits), Expect = 1.1, P = 0.68
 Identities = 55/73 (75%), Positives = 55/73 (75%), Strand = Minus / Plus

Query:    74 AAATTAGTTGAATAAAAACTGATCACTGATCGATTGATTGAATGATCGATTGATTGATTG 15
             AAA TAGTT   TAA A  TGAT   TGAT GATTGATTGA TGAT GATTGATTGATT 
Sbjct:    43 AAAATAGTTTT-TAAGAT-TGAT---TGATTGATTGATTGATTGATTGATTGATTGATTT 97

Query:    14 AT-TGATTGAT-TGT 2
              T TG  TG T TGT
Sbjct:    98 TTATGTGTGCTATGT 112

 Score = 149 (22.4 bits), Expect = 1.7, P = 0.82
 Identities = 37/46 (80%), Positives = 37/46 (80%), Strand = Minus / Plus

Query:    46 ATCGATTGATTGAATGATCGATTGATTGATTGATTGATTGATTGTT 1
             || | ||    || |||| ||||||||||||||||||||||||| |
Sbjct:    46 ATAGTTTTTAAGATTGATTGATTGATTGATTGATTGATTGATTGAT 91


>cbil|dbest|1124337 AA479302 zv21f08.s1 3'
            Lib=589[Homo_sapiens|mixed_(see_below)|Pooled_human_melanocyte,_fet
            al_heart,_and_pregnant_uterus|||] Length=462
            Length = 462

  Minus Strand HSPs:

 Score = 186 (27.9 bits), Expect = 0.036, P = 0.035
 Identities = 60/80 (75%), Positives = 60/80 (75%), Strand = Minus / Plus

Query:    81 AGGAAGTAAATTAGTTG-AATAAAAACTGATCACTGATCGATTGATTGAATG-A-TC-GA 26
             AG  A TA A TA TT  AA  A AA   ATCAC G T GATTGATTGAATG A T  GA
Sbjct:   248 AGTTACTATAGTATTTCTAAGCATAATCAATCACAGCT-GATTGATTGAATGCAATGTGA 306

Query:    25 TTGATTGATTGATTGATTGAT 5
             TTGATTGATTGATTGATTGAT
Sbjct:   307 TTGATTGATTGATTGATTGAT 327


>cbil|dbest|824766 AA185729 JM00M135.QM3 5'
            Lib=554[Schistosoma_japonicum||Whole_organism|||Miracidium]
            Length=282
            Length = 282

  Plus Strand HSPs:

 Score = 170 (25.5 bits), Expect = 0.15, P = 0.14
 Identities = 104/178 (58%), Positives = 104/178 (58%), Strand = Plus / Plus

Query:     4 AATCAATCAATCAATCAATCAATCGATCATT--CAATCAATCGATCAGTGATCAGTTTTT 61
             A T AATCAATCAATCAATCAATC AT ATT  CAATCA T  A  A TGA  A TTT  
Sbjct:    72 ATTGAATCAATCAATCAATCAATCAATAATTAGCAATCATTTCAA-ATTGAATAATTTCA 130

Query:    62 ATTCAACTAA-TTTACTTCCTTTCAAGAAAAACTAGCATATAAGACAATTGTTTTTACGG 120
             AT  AA  AA TTT  TT  T   AA     A TA   TA AA A  A   TTT T    
Sbjct:   131 ATAAAAAAAAATTTNATTA-TACAAATTNCTAATAATTTAAAATAGTANCATTTATTTTA 189

Query:   121 TAAATTTTTTCCGGATTTATCAATCGGATTTTGAANGCAGTA-ACGAAATTATTNTTTAT 179
             TAAA   T T     T  A  AATC  ATTT GAA   A  A A G AAT ATT TT  T
Sbjct:   190 TAAAANCTATAAACNTAAAA-AATCCTATTT-GAATNGAACAGATGGAATAATT-TTNGT 246

Query:   180 AA 181
             AA
Sbjct:   247 AA 248

 Score = 164 (24.6 bits), Expect = 0.28, P = 0.24
 Identities = 102/179 (56%), Positives = 102/179 (56%), Strand = Plus / Plus

Query:     4 AATCAATCAATCAATCAATCAATCGATCATT--CAATCAATCGATCAGTGATCAGTTTTT 61
             A T AATCAATCAATCAATCAATC AT ATT  CAATCA T  A  A TGA  A TTT  
Sbjct:    72 ATTGAATCAATCAATCAATCAATCAATAATTAGCAATCATTTCAA-ATTGAATAATTTCA 130

Query:    62 ATTCAACTAA-TTTACTTCCTTTCAAGAAAAACTAGCATATAAGACAATTGTTTTTACGG 120
             AT  AA  AA TTT  TT  T   AA     A TA   TA AA A  A   TTT T    
Sbjct:   131 ATAAAAAAAAATTTNATTA-TACAAATTNCTAATAATTTAAAATAGTANCATTTATTTTA 189

Query:   121 TAAATTTTTTCCGGATTTATCAATCGGATTTTGAANGCAGTAACGAAATTATTNTT-TAT 179
             TAAA   T T     T  A  AATC  ATTT  A  G A   A G AAT ATT T  TA 
Sbjct:   190 TAAAANCTATAAACNTAAAA-AATCCTATTTGAATNGAACAGATGGAATAATTTTNGTAA 248

Query:   180 AA 181
             AA
Sbjct:   249 AA 250


>cbil|dbest|448823 D80755 HUM102C11A 3' Lib=394[Homo_sapiens|brain||||fetal]
            Length=293
            Length = 293

  Plus Strand HSPs:

 Score = 168 (25.2 bits), Expect = 0.18, P = 0.16
 Identities = 95/151 (62%), Positives = 96/151 (63%), Strand = Plus / Plus

Query:    55 AGTTTTTATTCAACTAATTTACT-TCCTTTCAAGAAAAACTAGCATATAAGACAATTGTT 113
             AGTTTTT TTCAA   ATT A T TC TTTC A    AA T  C TATA G    TT TT
Sbjct:    68 AGTTTTTTTTCAAAACATTAAATCTCTTTTCCATGTCAA-TGTC-TATA-GTTT-TT-TT 122

Query:   114 TTTACGGTAAATTTTTTCCGGATTTATCAATCGGATTT--TGAANGCAGTAA-CGAAATT 170
             TT AC  TAAATTTTTTCCG ATTT    AT  GAT    TGAA  CA T   C AAAT 
Sbjct:   123 TTAACATTAAATTTTTTCCGCATTTCAGTATTAGATACACTGAATACATTTTTCTAAATG 182

Query:   171 ATTNTTTATAACGA-AATA-TAT-CATTTCGGCGTG 203
              TT T+  TA  GA AA A T T C TTT  GC TG
Sbjct:   183 TTTTTYCCTAGAGATAAAAGTTTTCCTTTTTGCCTG 218


>cbil|dbest|487321 N80982 za12e07.r1 5'
            Lib=262[Homo_sapiens|Liver_and_Spleen||||20_week-post_conception_fe
            tus] Length=264
            Length = 264

  Minus Strand HSPs:

 Score = 160 (24.0 bits), Expect = 0.45, P = 0.36
 Identities = 54/72 (75%), Positives = 54/72 (75%), Strand = Minus / Plus

Query:    87 CTTGAAAGGAAGTAAATTAG-TTGA-ATAAAAACTGATCACTGATCGATTGATTGAATGA 30
             CTT A AG AA TAAA  A  TTG  AT     CTGA C CTGAT GATTGATTGA TGA
Sbjct:     9 CTT-ACAGTAACTAAAACAAATTGGGATTTTG-CTGA-CTCTGATTGATTGATTGATTGA 65

Query:    29 TCGATTGATTGATT 16
             T GATTGATTGATT
Sbjct:    66 TTGATTGATTGATT 79

 Score = 152 (22.8 bits), Expect = 1.0, P = 0.64
 Identities = 36/40 (90%), Positives = 36/40 (90%), Strand = Minus / Plus

Query:    49 CTGA-TC-GATTGATTGAATGATCGATTGATTGATTGATT 12
             CTGA TC GATTGATTGA TGAT GATTGATTGATTGATT
Sbjct:    40 CTGACTCTGATTGATTGATTGATTGATTGATTGATTGATT 79


>cbil|dbest|447798 D79693 HUM308B07B 5' Lib=395[Homo_sapiens||aorta|||]
            Length=266
            Length = 266

  Minus Strand HSPs:

 Score = 155 (23.3 bits), Expect = 0.75, P = 0.53
 Identities = 92/143 (64%), Positives = 93/143 (65%), Strand = Minus / Plus

Query:   197 GAAATGATATATTTCGTTATAAANAATAATTTCGTTAC-TGCNTTCAAAATC-CGATTGA 140
             GAAA   T TAT TC T    AA AA A TTT G  A  TG  TTCA   T  C A T  
Sbjct:    63 GAAAACTTTTATCTC-TAGGGAAAAACA-TTTAGAAAAATGTATTCAGTGTATCTAATAC 120

Query:   139 T-AAATCCGGAAAAAATTTACCGTAAAAACAATTGTCTTATATGCTAGTTTTTCTTG-AA 82
             T AAAT CGGAAAAAATTTA  GTAAAAA AA    CTTA A  C A TT + C TG AA
Sbjct:   121 TGAAATGCGGAAAAAATTTAATGTAAAAAAAA----CTTAGA--C-A-TTGMACATGGAA 172

Query:    81 AGGA-AGTAAATTAGTTGAATAAAAACT 55
             A GA A T AAT   TTGAA AAAAACT
Sbjct:   173 AAGAGATTTAATGTTTTGAAAAAAAACT 200


>cbil|dbest|32451 T12014 A827F  Lib=88[Homo_sapiens|||||] Length=151
            Author_cmt: Alu repetitive element
            Length = 151

  Plus Strand HSPs:

 Score = 158 (23.7 bits), Expect = 0.97, P = 0.62
 Identities = 38/46 (82%), Positives = 38/46 (82%), Strand = Plus / Plus

Query:     2 ACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATC 47
             ||||||||||| ||| ||| |||||| |||| ||| || ||| |||
Sbjct:   106 ACAATCAATCAGTCAGTCAGTCAATCAATCAGTCATTCGATCAATC 151


>cbil|dbest|706152 AA072469 SWAMCA1575SK 5' Lib=281[Brugia_malayi|||||]
            Length=193
            Length = 193

  Minus Strand HSPs:

 Score = 153 (23.0 bits), Expect = 1.3, P = 0.72
 Identities = 33/36 (91%), Positives = 33/36 (91%), Strand = Minus / Plus

Query:    43 GATTGATTGAATGATCGATTGATTGATTGATTGATT 8
             |||||||||| ||||||||||||||||||  |||||
Sbjct:    34 GATTGATTGATTGATCGATTGATTGATTGGATGATT 69

 Score = 140 (21.0 bits), Expect = 6.0, P = 1.0
 Identities = 32/37 (86%), Positives = 32/37 (86%), Strand = Minus / Plus

Query:    40 TGATTGAATGATCGATTGATTGATTGATTGATTGATT 4
             ||||||| |||| ||| |||||||||||||  |||||
Sbjct:    33 TGATTGATTGATTGATCGATTGATTGATTGGATGATT 69

 Score = 138 (20.7 bits), Expect = 7.7, P = 1.0
 Identities = 44/59 (74%), Positives = 44/59 (74%), Strand = Minus / Plus

Query:    58 AACTGATCACTGATCGATTGATTGAATGA-TC-GATTGATTGATTGATTGATTGATTGTT 1
             AACTG T A TG  CGA    T  AATG  TC GATTGATTGATTGAT GATTGATTG T
Sbjct:     2 AACTGCTGAATGC-CGAAGTCTAAAATGTGTCTGATTGATTGATTGATCGATTGATTGAT 60


>cbil|dbest|453714 N48185 yz03d10.s1 3'
            Lib=390[Homo_sapiens||multiple_sclerosis_lesions|||Age_46]
            Length=502
            Length = 502

  Minus Strand HSPs:

 Score = 176 (26.4 bits), Expect = 2.4, P = 0.91
 Identities = 58/77 (75%), Positives = 58/77 (75%), Strand = Minus / Plus

Query:    81 AGGAAGTAAATTAGTTG-AATAAAAACTGATCACTGATCGATTGATTGAATGATCGAT-T 24
             AG  A TA A TA TT  AA  A AA   ATCAC G T GATTGATTGAATG  C AT T
Sbjct:   246 AGTTACTATAGTATTTCTAAGCATAATCAATCACAGCT-GATTGATTGAATG--CAATGT 302

Query:    23 GATTGATTGATTGATTGAT 5
             GATTGATTGATTGATTGAT
Sbjct:   303 GATTGATTGATTGATTGAT 321


>cbil|dbest|1009063 AA367735 EST78886 
            Lib=740[Homo_sapiens|placenta|placenta|||fetus] Length=240
            Length = 240

  Plus Strand HSPs:

 Score = 145 (21.8 bits), Expect = 2.6, P = 0.92
 Identities = 33/38 (86%), Positives = 33/38 (86%), Strand = Plus / Plus

Query:     2 ACAATCAATCAATCAATCAATCAATCGATCATTCAATC 39
             |||||||||||||||||||||||||| ||  || || |
Sbjct:   110 ACAATCAATCAATCAATCAATCAATCAATGTTTTAAGC 147

 Score = 139 (20.9 bits), Expect = 5.5, P = 1.0
 Identities = 47/64 (73%), Positives = 47/64 (73%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCAT--T-CAATCAATCG-ATCA-GTGATCA 55
             A CAATCAATCAATCAATCAATCAAT   T A     CAAT  AT G AT A GTGA CA
Sbjct:   113 ATCAATCAATCAATCAATCAATCAATGTTTTAAGCNGCAATTGATGGGATTATGTGACCA 172

Query:    56 GTTT 59
             GTTT
Sbjct:   173 GTTT 176


>cbil|dbest|1353404 AA649784 ns48b05.s1 
            Lib=881[Homo_sapiens||alveolar_rhabdomyosarcoma|||] Length=299
            Author_cmt: contains Alu repetitive element;contains element TAR1
            repetitive element ;
            Length = 299

  Plus Strand HSPs:

 Score = 163 (24.5 bits), Expect = 2.9, P = 0.94
 Identities = 35/38 (92%), Positives = 35/38 (92%), Strand = Plus / Plus

Query:     2 ACAATCAATCAATCAATCAATCAATCGATCATTCAATC 39
             | |||||||||||||||||||||||| |||| ||||||
Sbjct:   130 AAAATCAATCAATCAATCAATCAATCAATCAATCAATC 167

 Score = 162 (24.3 bits), Expect = 3.8, P = 0.98
 Identities = 34/36 (94%), Positives = 34/36 (94%), Strand = Plus / Plus

Query:     8 AATCAATCAATCAATCAATCGATCATTCAATCAATC 43
             |||||||||||||||||||| |||| ||||||||||
Sbjct:   132 AATCAATCAATCAATCAATCAATCAATCAATCAATC 167


>cbil|dbest|813315 AA174343 ms74g05.r1 5'
            Lib=553[Mus_musculus||Spleen|||4_weeks] Length=494
            Length = 494

  Plus Strand HSPs:

 Score = 175 (26.3 bits), Expect = 2.9, P = 0.94
 Identities = 57/84 (67%), Positives = 57/84 (67%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGTGATCAGTTTT 60
             A CAATCAATCAATCAATCAATCAATC  TC TTC  TC  TC  TC  T  TC  TTTT
Sbjct:   121 ACCAATCAATCAATCAATCAATCAATCTCTCGTTCTCTCTCTCTCTCTCTC-TCTCTTTT 179

Query:    61 TATTCAACTAATTTACTTCCTTTC 84
             T TT   CT A  T CT  CT TC
Sbjct:   180 TTTTTTNCTCACATTCTCTCTNTC 203


>cbil|dbest|1303718 AA606017 fa14f04.s1 3'
            Lib=944[Danio_rerio||pooled_15-19_hour_zebrafish_embryos|||]
            Length=425
            Length = 425

  Plus Strand HSPs:

 Score = 172 (25.8 bits), Expect = 3.8, P = 0.98
 Identities = 40/47 (85%), Positives = 40/47 (85%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATC 47
             | || || ||||||||||||||||| ||| || |||||||||| |||
Sbjct:   374 ACCAGTCGATCAATCAATCAATCAACCGACCAGTCAATCAATCAATC 420


>cbil|dbest|1155155 AA510515 vh54d09.r1 5'
            Lib=868[Mus_musculus|mammary_gland|mammary_gland|||4_weeks]
            Length=453
            Length = 453

  Plus Strand HSPs:

 Score = 171 (25.7 bits), Expect = 5.3, P = 1.0
 Identities = 41/48 (85%), Positives = 41/48 (85%), Strand = Plus / Plus

Query:     3 CAATCAATCAATCAATCAATCAATCGATCATTCAATCAATCGATCAGT 50
             CAATCAATCAATCAATCAATCAATC  TC  TCAATCA TC  TCAGT
Sbjct:   406 CAATCAATCAATCAATCAATCAATCT-TCTCTCAATCAGTCAGTCAGT 452


>cbil|dbest|922377 AA281459 zs96d03.s1 3'
            Lib=595[Homo_sapiens||germinal_center_B_cell|||] Length=390
            Length = 390

  Minus Strand HSPs:

 Score = 168 (25.2 bits), Expect = 6.3, P = 1.0
 Identities = 50/61 (81%), Positives = 50/61 (81%), Strand = Minus / Plus

Query:    65 GAATAAAAACTGA-TCACTGATCGATTGATTGAATGATCGAT-TGATTGATTGATTGATT 8
             G ATAA  A T A TCAC G T GATTGATTGAATG  C AT TGATTGATTGATTGATT
Sbjct:   274 GCATAATCAATCAATCACAGCT-GATTGATTGAATG--CAATGTGATTGATTGATTGATT 330

Query:     7 GAT 5
             GAT
Sbjct:   331 GAT 333


>cbil|dbest|444150 N42568 yy18f09.r1 5' Lib=367[Homo_sapiens||melanocyte|||]
            Length=445 Author_cmt: gb:M18533 DYSTROPHIN (HUMAN);
            Length = 445

  Minus Strand HSPs:

 Score = 169 (25.4 bits), Expect = 7.4, P = 1.0
 Identities = 67/95 (70%), Positives = 67/95 (70%), Strand = Minus / Plus

Query:    95 TAGTTTTTCTTGAAAGGAAGTAAATTAGTTGAATAAAAACTGATCACTGATCG-ATT-GA 38
             T G TTTT TT AAAGG A  A AT  GT GAAT AA AC  A  ACT AT   AT  GA
Sbjct:    19 TGGATTTTTTT-AAAGGGA--ACAT--GT-GAATGAATACACAGGACTTATTATATCAGA 72

Query:    37 TTGAATGATCGATTGATTGATTGATTGATTGATTGTT 1
              TGA T ATCG TTG TTG TTGATTGATTGATTG T
Sbjct:    73 GTGAGTAATCGGTTGNTTGGTTGATTGATTGATTGAT 109


>cbil|dbest|75483 D41410 RICS3891A  Lib=193[Oryza_sativa|||||]
            Length=202
            Length = 202

  Minus Strand HSPs:

 Score = 137 (20.6 bits), Expect = 8.3, P = 1.0
 Identities = 29/31 (93%), Positives = 29/31 (93%), Strand = Minus / Plus

Query:    45 TCGATTGATTGAATGATCGATTGATTGATTG 15
             |||||| ||||| ||||||||||||||||||
Sbjct:   109 TCGATTCATTGATTGATCGATTGATTGATTG 139


>cbil|dbest|1046574 AA405239 zt06e12.s1 3'
            Lib=595[Homo_sapiens||germinal_center_B_cell|||] Length=256
            Author_cmt: gb:M21121 T-CELL SPECIFIC RANTES PROTEIN PRECURSOR
            (HUMAN);contains Alu repetitive element;
            Length = 256

  Plus Strand HSPs:

 Score = 145 (21.8 bits), Expect = 9.6, P = 1.0
 Identities = 51/69 (73%), Positives = 51/69 (73%), Strand = Plus / Plus

Query:     1 AACAATCAATCAATCAATCAATCAATCGATCATTCA-ATCAATCGATC-AGTGATCAGTT 58
             A CAATCAATCAATCAATCAATCAATC ATC T C  ATC A C  TC A T  TC  TT
Sbjct:    65 ATCAATCAATCAATCAATCAATCAATCAATC-TCCTTATCCAACTCTCTATTTCTCCCTT 123

Query:    59 TTTATTC-AAC 68
             T   TTC AAC
Sbjct:   124 TCC-TTCTAAC 133


Parameters:
  P=6
  V=250
  B=250

  ctxfactor=2.00
  E=10

  Query                        -----  As Used  -----    -----  Computed  ----
  Strand MatID Matrix name     Lambda    K       H      Lambda    K       H
   +1      0   +5,-4           0.192   0.173   0.357    same    same    same
               q=10  r=10      0.104  0.0151  0.0600
   -1      0   +5,-4           0.192   0.173   0.357    same    same    same
               q=10  r=10      0.104  0.0151  0.0600

  Query
  Strand MatID  Length  Eff.Length   E     S  W   T  X     E2  S2
   +1      0      328       324      10. 117 11 N/A 73   0.022 76
                                                  82   0.022 108
   -1      0      328       324      10. 117 11 N/A 73   0.022 76
                                                  82   0.022 108


Statistics:

  Database:  /usr/local/db/others/blast/dbEST
    Title:  dbEST
    Release date:  unknown
    Posted date:  9:10 AM EST Dec 21, 1997
    Format:  BLAST
  # of letters in database:  500,351,318
  # of sequences in database:  1,352,941
  # of database sequences satisfying E:  30
  No. of states in DFA:  176 (176 KB)
  Total size of DFA:  184 KB (192 KB)
  Time to generate neighborhood:  0.00u 0.01s 0.01t  Elapsed: 00:00:00
  No. of processors used:  6
  Search cpu time:  14.63u 0.95s 15.58t  Elapsed: 00:00:03
  Total cpu time:  14.66u 1.00s 15.66t  Elapsed: 00:00:03
  Start:  Thu Feb  5 21:27:27 1998   End:  Thu Feb  5 21:27:30 1998

Date: 14:53:33 on Sun 17 Dec 117.