CHIP ELEMENT_ID NAME PID TILE_TYPE EPCR_CLASS CONTROL_TYPE CONTROL_NAME GENOMIC_LOCATION_MM8 TILE_STRAND PRIMARY_REFSEQ PRIMARY_STRAND PRIMARY_DISTANCE_TO_TSS PRIMARY_REFSEQ_TSS GENEID SYMBOL SYNONYMS DESCRIPTION MGI_ID UG CHROMOSOME MAP_LOCATION HUMAN_SYMBOL HUMAN_GENEID SECONDARY_REFSEQ SECONDARY_STRAND SECONDARY_DISTANCE_TO_TSS SECONDARY_REFSEQ_TSS SECONDARY_GENEID SECONDARY_SYMBOL PCR_STATUS FORWARD_PRIMER REVERSE_PRIMER BLOCK COL ROW FEATURE_LOCATION BCBC-5A-0 14092761 P100204 Ganab ProximalPromoter P100204 ProximalPromoter Duplication Tile chr19:8963902-8964849 (+) NM_008060 + 306 8965155 14376 Ganab AU042638|G2an|GluII|MGC144011|MGC144012|mKIAA0088 alpha glucosidase 2 alpha neutral subunit MGI:1097667 Mm.3196 19 19 A GANAB 23193 NM_176843 + 3853 8960049 109077 Ints5 0 ttgttggacattaaccggagg gcatccacccttctgtagcac 1 1 1 1.1.1.1.1.1 BCBC-5A-0 14092780 P101044 ProximalPromoter P101044 ProximalPromoter No Hits Tile 0 ggccataaactcccaagatcc ctcgctctcattggctctgtt 1 1 2 1.1.1.1.2.1 BCBC-5A-0 14092799 P101794 Rps23 ProximalPromoter P101794 ProximalPromoter Unique Tile chr13:91396135-91397203 (+) NM_024175 + 198 91397401 66475 Rps23 2410044J15Rik ribosomal protein S23 MGI:1913725 Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421; Mm.306302; Mm.389421 13 13 C3 RPS23 6228 0 caacaaccacatgaaggctca tttcaggcaaatgacaaggct 1 1 3 1.1.1.1.3.1 BCBC-5A-0 14092818 P102927 Lipg ProximalPromoter P102927 ProximalPromoter Unique Tile chr18:75086440-75087509 (-) NM_010720 - 31 75086471 16891 Lipg 3110013K01Rik|EL|mEDL lipase, endothelial MGI:1341803 Mm.299647 18 18 E2 LIPG 9388 NM_001002239 + 38343 75125852 319195 Rpl17 0 taaagagagggaggaaaggatgg ccagagactagaagtggacaggc 1 1 4 1.1.1.1.4.1 BCBC-5A-0 14092837 P103677 Elac2 ProximalPromoter P103677 ProximalPromoter Unique Tile chr11:64793999-64794964 (+) NM_023479 + 327 64795291 68626 Elac2 1110017O07Rik|D11Wsu80e|Hpc2 elaC homolog 2 (E. coli) MGI:1890496 Mm.157711 11 - ELAC2 60528 0 tcagacatctgacagtctccctg ttcaggttcatcgtcttctgtca 1 1 5 1.1.1.1.5.1 BCBC-5A-0 14092856 P104421 Lypla1 DistalPromoter P104421 DistalPromoter Unique Tile chr1:4795033-4796844 (+) NM_008866 + 1098 4797942 18777 Lypla1 Pla1a lysophospholipase 1 MGI:1344588 Mm.299955 1 1 A1 LYPLA1 10434 NM_025300 - 19242 4775791 27395 Mrpl15 0 ccttggaactcacagtgaaagga ctcaaaatctccagttcctgcaa 1 1 6 1.1.1.1.6.1 BCBC-5A-0 14092875 P104967 Abcf2 DistalPromoter P104967 DistalPromoter Unique Tile chr5:24093345-24095407 (-) NM_013853 - 5921 24087424 27407 Abcf2 0710005O05Rik|D13Ertd614e|E430001O06 ATP-binding cassette, sub-family F (GCN20), member 2 MGI:1351657 Mm.21629 5 5 A3 ABCF2 10061 NM_025891 - 16559 24111966 66993 Smarcd3 1 ggggttaccagtctctaggcaga ttcccatcggttaggctacattt 1 1 7 1.1.1.1.7.1 BCBC-5A-0 14092894 P105333 Plscr3 DistalPromoter P105333 DistalPromoter Unique Tile chr11:69660204-69662237 (+) NM_023564 + 633 69662870 70310 Plscr3 2210403O21Rik|2610037N06Rik|ESTM3|X83310 phospholipid scramblase 3 MGI:1917560 Mm.28874 11 11 B3|11 43.0 cM PLSCR3 57048 NM_026982 + 5485 69654719 69186 1810027O10Rik 1 acacacacacacacacacactgg aaggagaggcaagaggagagtca 1 1 8 1.1.1.1.8.1 BCBC-5A-0 14092913 P106506 Slc2a9 DistalPromoter P106506 DistalPromoter Unique Tile chr5:38791347-38793458 (-) NM_001012363;NM_145559; - 946 38790401 117591 Slc2a9 Glut9 solute carrier family 2 (facilitated glucose transporter), member 9 MGI:2152844 Mm.260137 5 5 B3 SLC2A9 56606 0 taagactgactcacccctctccc gacggttagaagagccgagagat 1 1 9 1.1.1.1.9.1 BCBC-5A-0 14092932 P203584 Hipk2 ProximalPromoter P203584 ProximalPromoter Unique Tile chr6:38805489-38806575 (-) NM_010433 - 41 38805530 15258 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 MGI:1314872 Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962 6 6 B HIPK2 28996 NM_011539 + 42017 38848592 21391 Tbxas1 0 ttttcgtaagttggaggcaaaag ctcagcctcagtgggaatctg 1 1 10 1.1.1.1.10.1 BCBC-5A-0 14092951 P202789 Neto1 ProximalPromoter P202789 ProximalPromoter Unique Tile chr18:86527860-86528912 (+) NM_144946 + 232 86529144 246317 Neto1 Btcl1|C130005O10Rik neuropilin (NRP) and tolloid (TLL)-like 1 MGI:2180216 Mm.329578 18 18 E4 NETO1 81832 0 gcttgaatttcagtgttgatccc tagaaatgactgtcttccgtccc 1 1 11 1.1.1.1.11.1 BCBC-5A-0 14092970 P203827 6330503K22Rik ProximalPromoter P203827 ProximalPromoter Unique Tile chr7:118502580-118503520 (+) NM_182995 + 239 118503759 101565 6330503K22Rik AA415922|AI427129|AW557948 RIKEN cDNA 6330503K22 gene MGI:2141942 Mm.23279 7 7 F2 CP110 9738 NM_019580 - 5693 118496887 56209 Mir16 0 agtgggacagatctcacctcttg accatagaaagtctcctcagggc 1 1 12 1.1.1.1.12.1 BCBC-5A-0 14092989 P201282 9830169C18Rik ProximalPromoter P201282 ProximalPromoter Unique Tile chr12:85251705-85252747 (-) NM_172581 - 136 85251569 217705 9830169C18Rik 9330169D17 RIKEN cDNA 9830169C18 gene MGI:2443027 Mm.259468 12 12 D1 C14orf44 145483 NM_172582 + 89 85251794 217707 Coq6 0 cattcctttacaggccaaaagtg ggctaaaaccacacaaggttgac 1 1 13 1.1.1.1.13.1 BCBC-5A-0 14093008 P205337 Dlx1 ProximalPromoter P205337 ProximalPromoter Unique Tile chr2:71328746-71329684 (+) NM_010053 + 599 71330283 13390 Dlx1 Dlx|Dlx-1 distal-less homeobox 1 MGI:94901 Mm.425087; Mm.4543; Mm.425087; Mm.4543; Mm.425087; Mm.4543; Mm.425087; Mm.4543; Mm.425087; Mm.4543; Mm.425087; Mm.4543 2 2 C2|2 44.0 cM DLX1 1745 NM_025633 + 16732 71312014 66559 Metapl1 2 gcctcatgcctttaatcagaaga agagtacttggggtttgggagtc 1 1 14 1.1.1.1.14.1 BCBC-5A-0 14093027 P201614 Cd200r3 ProximalPromoter P201614 ProximalPromoter Unique Tile chr16:44862061-44863052 (+) NM_029018 + 11 44863063 74603 Cd200r3 4733401I18Rik|4833409J19Rik|AI505817|BB106877|MGC123954|mCD200RLb CD200 receptor 3 MGI:1921853 Mm.297337 16 16 B4 0 tgttcatttccatcacctgtttg gactccagcttggtcaactttgt 1 1 15 1.1.1.1.15.1 BCBC-5A-0 14093046 P206069 Ubl3 ProximalPromoter P206069 ProximalPromoter Unique Tile chr5:148863080-148864101 (-) NM_011908 - 58 148863138 24109 Ubl3 AW108023|HCG ubiquitin-like 3 MGI:1344373 Mm.21846 5 5 G2-3 UBL3 5412 0 aatcatccttaacagcacccaga ctcctccacttctcaatcccac 1 1 16 1.1.1.1.16.1 BCBC-5A-0 14093065 P200208 1700092C17Rik ProximalPromoter P200208 ProximalPromoter Unique Tile chr2:22606395-22607428 (+) NM_183102 + 202 22607630 74295 1700092C17Rik - RIKEN cDNA 1700092C17 gene MGI:1921545 Mm.250828 2 2 A3 NM_019456 + 18650 22626078 54519 Apbb1ip 0 tcagttggaagccactccataat tggttagcttgttcccttatcca 1 1 17 1.1.1.1.17.1 BCBC-5A-0 14093084 P210679 Parp12 ProximalPromoter P210679 ProximalPromoter Unique Tile chr6:39047774-39048691 (-) NM_172893 - 182 39047956 243771 Parp12 9930021O16|AA409132|AA536654|PARP-12|Zc3hdc1 poly (ADP-ribose) polymerase family, member 12 MGI:2143990 Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775; Mm.268462; Mm.394775 6 6 B1 PARP12 64761 1 tgtttccagtactccgtcctctc ggactgaggcttagcacggac 1 1 18 1.1.1.1.18.1 BCBC-5A-0 14093103 P207939 2310002J15Rik ProximalPromoter P207939 ProximalPromoter Unique Tile chr2:25061691-25062677 (-) NM_026415 - 215 25061906 67859 2310002J15Rik AV023762 RIKEN cDNA 2310002J15 gene MGI:1915109 Mm.46431 2 2 A3 MGC59937 375791 NM_176834 + 2269 25064946 68846 1110061N23Rik 0 tcttgtctcgacctgactgactg agaaatgctccaggatgtagctg 1 1 19 1.1.1.1.19.1 BCBC-5A-0 14092762 P100228 Gpi1 ProximalPromoter P100228 ProximalPromoter Unique Tile chr7:33939176-33940263 (-) NM_008155 - 133 33939043 14751 Gpi1 Amf|Gpi-1|Gpi-1r|Gpi-1s|Gpi-1t|Gpi1-r|Gpi1-s|Gpi1-t|Gpi1s|MGC113776|Org glucose phosphate isomerase 1 MGI:95797 Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589; Mm.426213; Mm.589 7 7 B1|7 11.0 cM GPI 2821 NM_026549 - 33769 33905407 68079 Pdcd2l 0 gtggacttgttcagtggctcc cctctgctggcctctctgtaa 1 2 1 1.1.1.1.1.2 BCBC-5A-0 14092781 P100978 Rpl10a ProximalPromoter P100978 ProximalPromoter Unique Tile chr17:28054761-28055662 (+) NM_011287 + 525 28056187 19896 Rpl10a CsA-19|Nedd6 ribosomal protein L10A MGI:1343877 Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532; Mm.336955; Mm.380532 17 17 A3.3 RPL10A 4736 NM_011566 - 22073 28077735 21678 Tead3 0 agcaaaggtttggactgggat ccagtctatcctggccatctg 1 2 2 1.1.1.1.2.2 BCBC-5A-0 14092800 P101818 Emid2 ProximalPromoter P101818 ProximalPromoter Unique Tile chr5:137168412-137169366 (-) NM_024474 - 664 137167748 140709 Emid2 9430032K24Rik|BC002218|Col26a|Col26a1|Emu2|MGC7475 EMI domain containing 2 MGI:2155345 Mm.295020 5 5 G1 EMID2 136227 NM_026073 + 23410 137192776 67286 Rabl5 0 cactttgctgggaggattctg aaggctccacatgctgattgt 1 2 3 1.1.1.1.3.2 BCBC-5A-0 14092819 P102951 Nck2 ProximalPromoter P102951 ProximalPromoter Unique Tile chr1:43452712-43453793 (+) NM_010879 + 24302 43478095 17974 Nck2 Grb4|NCKbeta non-catalytic region of tyrosine kinase adaptor protein 2 MGI:1306821 Mm.233951 1 1 C1 NCK2 8440 0 cagcctgctatggactaaatgct aaacggtaggaaagcttccagag 1 2 4 1.1.1.1.4.2 BCBC-5A-0 14092838 P103701 Retnlb ProximalPromoter P103701 ProximalPromoter Unique Tile chr16:48735768-48736758 (+) NM_023881 + 146 48736612 57263 Retnlb 9030012B21Rik|Fizz2|RELMbeta|Relmb|Xcp3 resistin like beta MGI:1888505 Mm.21123 16 16 B5|16 33.0 cM RETNLB 84666 NM_020509 + 25419 48762177 57262 Retnla 0 caaacacagaagtggatgctcac agcagagaggacgatgtgtaagg 1 2 5 1.1.1.1.5.2 BCBC-5A-0 14092857 P104535 Tk1 DistalPromoter P104535 DistalPromoter Unique Tile chr11:117643726-117645662 (-) NM_009387 - 1683 117642043 21877 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 MGI:98763 Mm.2661; Mm.425550; Mm.2661; Mm.425550; Mm.2661; Mm.425550; Mm.2661; Mm.425550; Mm.2661; Mm.425550; Mm.2661; Mm.425550; Mm.2661; Mm.425550; Mm.2661; Mm.425550; Mm.2661; Mm.425550; Mm.2661; Mm.425550 11 11 E1-E2|11 78.0 cM TK1 7083 NM_027827 + 1697 117642029 71562 Afmid 0 acacatgtgcagttctctgtgga ttcttcctgcttacctctgtccc 1 2 6 1.1.1.1.6.2 BCBC-5A-0 14092876 P104991 Pcdhga12 DistalPromoter P104991 DistalPromoter Unique Tile chr18:37888677-37890798 (+) NM_033595 + 755 37891553 93724 Pcdhga12 Pcdh13|pc2c protocadherin gamma subfamily A, 12 MGI:1935229 Mm.247203 18 18 C PCDHGA12 26025 NM_033580 + 825 37887852 93705 Pcdhgb8 0 cgcagaagtcacctactccttca acatggtagaaacacagacccga 1 2 7 1.1.1.1.7.2 BCBC-5A-0 14092895 P105357 Crip2 DistalPromoter P105357 DistalPromoter Unique Tile chr12:113585080-113586974 (+) NM_024223 + 1380 113588354 68337 Crip2 0610010I23Rik|AW743261|C77570|CRP2|Crp|ESP1|Hlp cysteine rich protein 2 MGI:1915587 Mm.133825 12 12 F1|12 58.7 cM CRIP2 1397 NM_007763 + 12845 113599819 12925 Crip1 0 ctgctccaatacccagaataccc cttcccatttaggagtcctgtgg 1 2 8 1.1.1.1.8.2 BCBC-5A-0 14092914 P106528 Tcfap2d DistalPromoter P106528 DistalPromoter Unique Tile chr1:19084910-19086751 (+) NM_153154 + 1484 19088235 226896 Tcfap2d Tfap2d transcription factor AP-2, delta MGI:2153466 Mm.244858 1 1 A3 TFAP2D 83741 0 tccttctcaggaggtgtcaactg gcatgctcacacaaggtacacaa 1 2 9 1.1.1.1.9.2 BCBC-5A-0 14092933 P203518 ProximalPromoter P203518 ProximalPromoter No Hits Tile 0 gttcacaaccatccgataaggag caaagagattaggggaagaggga 1 2 10 1.1.1.1.10.2 BCBC-5A-0 14092952 P202813 Per1 ProximalPromoter P202813 ProximalPromoter Unique Tile chr11:68910618-68911644 (+) NM_011065 + 3499 68915143 18626 Per1 MGC102121|Per|m-rigui|mPer1 period homolog 1 (Drosophila) MGI:1098283 Mm.7373 11 11 B PER1 5187 NM_009497 + 5896 68904722 22318 Vamp2 0 ttatggtgtcagagacctgggtt ttctccacaaccattaggcattt 1 2 11 1.1.1.1.11.2 BCBC-5A-0 14092971 P203851 Pcdhga8 ProximalPromoter P203851 ProximalPromoter Unique Tile chr18:37850616-37851667 (+) NM_033591 + 12 37851679 93716 Pcdhga8 KIAA4054|mKIAA4054 protocadherin gamma subfamily A, 8 MGI:1935221 Mm.247203 18 18 B3 PCDHGA8 9708 NM_033576 + 4089 37846527 93701 Pcdhgb4 0 ccatttccatggtggctttaata gcatctctctcccagtaggtgaa 1 2 12 1.1.1.1.12.2 BCBC-5A-0 14092990 P201306 Mbl1 ProximalPromoter P201306 ProximalPromoter Unique Tile chr14:40059277-40060222 (+) NM_010775 + 8 40060214 17194 Mbl1 MBL-A|MBP-A|S-MBP mannose binding lectin (A) MGI:96923 Mm.281805 14 14 B|14 15.0 cM NM_023134 + 18777 40040500 20387 Sftpa1 0 cggtcaagattgctttgagaact tctggtagtatcctccccaatga 1 2 13 1.1.1.1.13.2 BCBC-5A-0 14093009 P205745 Prg1 ProximalPromoter P205745 ProximalPromoter Unique Tile chr10:61903346-61904332 (-) NM_011157 - 234 61903112 19073 Prg1 Prg|Sgc proteoglycan 1, secretory granule MGI:97756 Mm.338790 10 10 B4 PRG1 23574 NM_133672 - 21237 61882109 30930 Vps26a 0 cagaggagagaaatcccaacaga gccatctgtcatttgcatgttta 1 2 14 1.1.1.1.14.2 BCBC-5A-0 14093028 P201638 Jarid1b ProximalPromoter P201638 ProximalPromoter Unique Tile chr1:136375311-136376364 (+) NM_152895 + 241 136376605 75605 Jarid1b 2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|KIAA4034|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034 jumonji, AT rich interactive domain 1B (Rbp2 like) MGI:1922855 Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994; Mm.28995; Mm.391994 1 1 E4|1 72.0 cM JARID1B 10765 NM_183292 - 9218 136366093 71001 4931440L10Rik 1 tatgtagagagttccaggccagc cacgtcatatattttggcacgaa 1 2 15 1.1.1.1.15.2 BCBC-5A-0 14093047 P206093 Psma5 ProximalPromoter P206093 ProximalPromoter Unique Tile chr3:108384345-108385278 (+) NM_011967 + 27 108385251 26442 Psma5 MGC102091|MGC118067|ZETA proteasome (prosome, macropain) subunit, alpha type 5 MGI:1347009 Mm.208883 3 3 F3 PSMA5 5686 NM_019972 + 26909 108412187 20661 Sort1 0 gggatttgaactcaggaccttct attgaaagcagcaccctaatcaa 1 2 16 1.1.1.1.16.2 BCBC-5A-0 14093066 P200232 Pole3 ProximalPromoter P200232 ProximalPromoter Unique Tile chr4:62011669-62012712 (-) NM_021498 - 294 62011375 59001 Pole3 1810034K18Rik|YBL1 polymerase (DNA directed), epsilon 3 (p17 subunit) MGI:1933378 Mm.27444 4 4 C1 POLE3 54107 NM_177607 + 60 62011729 214106 4933430I17Rik 0 aagtgcagagttctttccaccag tttgactctctgaggtttccgtc 1 2 17 1.1.1.1.17.2 BCBC-5A-0 14093085 P210612 Klhl4 ProximalPromoter P210612 ProximalPromoter Unique Tile chrX:110590241-110591265 (+) NM_172781 + 198 110591463 237010 Klhl4 B130014A11|C130018J01Rik kelch-like 4 (Drosophila) MGI:2442829 Mm.132583 X X E1 KLHL4 56062 2 tagtcattctgaaccagatgcca aagtgctgagagagcaagcagtt 1 2 18 1.1.1.1.18.2 BCBC-5A-0 14093104 P207964 Tubb6 ProximalPromoter P207964 ProximalPromoter Unique Tile chr18:67514938-67515849 (+) NM_026473 + 250 67516099 67951 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 MGI:1915201 Mm.181860 18 18 E1 TUBB6 84617 NM_007702 + 45833 67469105 12683 Cidea 0 tccaggacaagcctttcatttta cttctgcaccacggtactgttag 1 2 19 1.1.1.1.19.2 BCBC-5A-0 14092763 P100252 Hcls1 ProximalPromoter P100252 ProximalPromoter Unique Tile chr16:36853249-36854325 (+) NM_008225 + 72 36854253 15163 Hcls1 AW213261|HS1 hematopoietic cell specific Lyn substrate 1 MGI:104568 Mm.4091 16 16 B HCLS1 3059 NM_001037321 - 44050 36898375 207215 Fbxo40 0 tgactgggataaggagagcca cagagcacccacctttactgg 1 3 1 1.1.1.1.1.3 BCBC-5A-0 14092782 P101002 Serf2 ProximalPromoter P101002 ProximalPromoter Unique Tile chr2:121140600-121141596 (+) NM_011354 + 771 121140825 378702 Serf2 C80083|Msmac1l|m4F5rel small EDRK-rich factor 2 MGI:1337041 Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283; Mm.262252; Mm.383283 2 2 E5 SERF2 10169 NM_145973 - 6558 121134042 269344 Ell3 1 ccggcctagtttctacaggct cacccctttctctaacccagg 1 3 2 1.1.1.1.2.3 BCBC-5A-0 14092801 P102135 Aldh3a1 ProximalPromoter P102135 ProximalPromoter Unique Tile chr11:61023772-61024791 (+) NM_007436 + 148 61024939 11670 Aldh3a1 Ahd-4|Ahd4|Aldh|Aldh3 aldehyde dehydrogenase family 3, subfamily A1 MGI:1353451 Mm.4257 11 11 B2|11 34.25 cM ALDH3A1 218 NM_001004143 - 32518 60991254 216825 Usp22 0 tctcctctcctttccttgtgatg ggttttgaagattgtgtcttggg 1 3 3 1.1.1.1.3.3 BCBC-5A-0 14092820 P102975 Rpsa ProximalPromoter P102975 ProximalPromoter Unique Tile chr9:119975574-119976467 (+) NM_011029 + 18 119976485 16785 Rpsa 67kDa|AL022858|Lamr|Lamr1|Lamrl1|MGC117921|MGC118614|MLR|P40|P40-3|P40-8 ribosomal protein SA MGI:105381 Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071; Mm.311972; Mm.391708; Mm.4071 9 9 F4|9 71.0 cM RPSA 3921 NM_001024730 - 8560 119985027 546166 LOC546166 0 agaactgaagaaacccagagcct acgtccttaaataacccacagcc 1 3 4 1.1.1.1.4.3 BCBC-5A-0 14092839 P103725 Fabp4 ProximalPromoter P103725 ProximalPromoter Unique Tile chr3:10191192-10192223 (-) NM_024406 - 101 10191091 11770 Fabp4 ALBP/Ap2|Ap2|Lbpl fatty acid binding protein 4, adipocyte MGI:88038 Mm.582 3 3 A1|3 13.9 cM FABP4 2167 NM_011598 - 11438 10179754 21884 Fabp9 0 aacatctcccatcattctgctgt tccttcatgaccagaccctgtat 1 3 5 1.1.1.1.5.3 BCBC-5A-0 14092858 P104559 Uros DistalPromoter P104559 DistalPromoter Unique Tile chr7:133548447-133550192 (-) NM_009479 - 809 133547638 22276 Uros AI415298|Uros3 uroporphyrinogen III synthase MGI:98917 Mm.3160 7 7 F3|7 63.0 cM UROS 7390 NM_025392 + 764 133547683 66165 Bccip 1 cctacacagaggctcacaagcat gaatcctgggattgctcagactt 1 3 6 1.1.1.1.6.3 BCBC-5A-0 14092877 P104925 Grcc10 DistalPromoter P104925 DistalPromoter Unique Tile chr6:124707713-124709541 (-) NM_013535 - 1015 124706698 14790 Grcc10 2310033H05Rik|C10 gene rich cluster, C10 gene MGI:1315201 Mm.333380 6 6 F2|6 60.22 cM C12orf57 113246 NM_013545 - 8990 124698723 15170 Ptpn6 0 tggtgacaccttcctcttctctg agatttgcttatgcttgctgtgc 1 3 7 1.1.1.1.7.3 BCBC-5A-0 14092896 P105381 Sdhc DistalPromoter P105381 DistalPromoter Unique Tile chr1:172988767-172990803 (-) NM_025321 - 1490 172987277 66052 Sdhc 0610010E03Rik|AI316496|AU019277|MGC103103 succinate dehydrogenase complex, subunit C, integral membrane protein MGI:1913302 Mm.198138 1 1 H3 SDHC 6391 NM_008623 + 1380 172987387 17528 Mpz 0 gtagaagccagaagaggggatca acatcgctccaaccctctctaac 1 3 8 1.1.1.1.8.3 BCBC-5A-0 14092915 P106550 Tcfe3 DistalPromoter P106550 DistalPromoter Unique Tile chrX:6917027-6918976 (+) NM_172472 + 655 6919631 209446 Tcfe3 AI851540|F830016E06Rik|Tfe-3|Tfe3 transcription factor E3 MGI:98511 Mm.249142 X X A2 TFE3 7030 NM_207202 - 18744 6898283 54648 Ccdc120 1 aatcagggctacacagagaaccc gatgaatgagtggacggatggta 1 3 9 1.1.1.1.9.3 BCBC-5A-0 14092934 P203542 Card14 ProximalPromoter P203542 ProximalPromoter Unique Tile chr11:119129731-119130769 (+) NM_130886 + 107 119130876 170720 Card14 Bimp2|CARMA2 caspase recruitment domain family, member 14 MGI:2386258 Mm.130832 11 11 E2 CARD14 79092 NM_138669 - 13598 119116133 192170 Ddx48 1 ccagcctcaaattcacagagact agaccgagttcagaaactgatgc 1 3 10 1.1.1.1.10.3 BCBC-5A-0 14092953 P201469 Parp9 ProximalPromoter P201469 ProximalPromoter Unique Tile chr16:35857666-35858730 (+) NM_030253 + 56 35858786 80285 Parp9 AW214463|BC003281|Bagl|Bal|MGC7868 poly (ADP-ribose) polymerase family, member 9 MGI:1933117 Mm.49074 16 16 B3 PARP9 83666 NM_001013371 - 63 35858667 209200 Dtx3l 0 atagttaaatggtgaaacccccg tcgaaactgaaactttgcctctc 1 3 11 1.1.1.1.11.3 BCBC-5A-0 14092972 P203875 Tgfb1i1 ProximalPromoter P203875 ProximalPromoter Unique Tile chr7:128036816-128037864 (+) NM_009365 + 154 128038018 21804 Tgfb1i1 ARA55|Hic5|TSC-5|hic-5 transforming growth factor beta 1 induced transcript 1 MGI:102784 Mm.3248 7 7 F1-F3 TGFB1I1 7041 NM_146205 + 7553 128029263 233912 Armc5 0 ggaaacctgctatgttcgtatgg aagctgaaaccaagtcagagtgg 1 3 12 1.1.1.1.12.3 BCBC-5A-0 14092991 P201330 AI173486 ProximalPromoter P201330 ProximalPromoter Unique Tile chr18:61911823-61912748 (-) NM_178928 - 208 61912031 106877 AI173486 - expressed sequence AI173486 MGI:2147199 Mm.26632 18 18 E1 FLJ36748 134265 2 ttccagtagttcacagccctagc cacctgtgttcaagtgtttagcg 1 3 13 1.1.1.1.13.3 BCBC-5A-0 14093010 P205769 Ptpn1 ProximalPromoter P205769 ProximalPromoter Unique Tile chr2:167622773-167623727 (+) NM_011201 + 114 167623613 19246 Ptpn1 PTP-1B|PTP1B protein tyrosine phosphatase, non-receptor type 1 MGI:97805 Mm.277916 2 2 H3 PTPN1 5770 1 cgggctatagagtgattcgttgt atctcctcgaactccttctccat 1 3 14 1.1.1.1.14.3 BCBC-5A-0 14093029 P201572 Nckap1l ProximalPromoter P201572 ProximalPromoter End Repeat Tile chr15:103280599-103281693 (+) NM_153505 + 167 103281860 105855 Nckap1l 4930568P13Rik|AI463083|Hemp1 NCK associated protein 1 like MGI:1926063 Mm.30805 15 15 F3 NCKAP1L 3071 NM_177631 - 4106 103276493 223927 BC048502 1 acacacacacacacacacacaca cttcctctttctggttgtgcagt 1 3 15 1.1.1.1.15.3 BCBC-5A-0 14093048 P206117 Tpsg1 ProximalPromoter P206117 ProximalPromoter End Repeat Tile chr17:25095885-25096795 (+) NM_012034 + 1388 25098183 26945 Tpsg1 Prss31|TMT tryptase gamma 1 MGI:1349391 Mm.180108 17 17 A3.3|17 10.38 cM TPSG1 25823 NM_010781 + 1736 25094149 17229 Mcpt6 0 ctccagtcatgcagtggtacatc ctgaatggccttatcagagtgct 1 3 16 1.1.1.1.16.3 BCBC-5A-0 14093067 P200256 Imp4 ProximalPromoter P200256 ProximalPromoter Unique Tile chr1:34383349-34384283 (+) NM_178601 + 162 34384445 27993 Imp4 AA409888|AV031295|D1Wsu40e IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) MGI:106572 Mm.291745 1 1 B|1 17.0 cM IMP4 92856 NM_027159 - 65 34384218 69668 Ccdc115 0 ttgtctttagcgctgagtaaggg attaattacccggatttgggatg 1 3 17 1.1.1.1.17.3 BCBC-5A-0 14093086 P210636 BC060677 ProximalPromoter P210636 ProximalPromoter Unique Tile chr18:61833053-61834082 (-) NM_172832 - 49 61833004 240334 BC060677 C630049M13 cDNA sequence BC060677 MGI:3606062 Mm.234457 18 18 E1 MGC3265 78991 NM_021296 - 17618 61851700 17714 Grpel2 0 agcacataagaggacgtgacaca ctggctggtctcagtctttcatt 1 3 18 1.1.1.1.18.3 BCBC-5A-0 14093105 P207982 2900009I07Rik ProximalPromoter P207982 ProximalPromoter Unique Tile chr19:24544695-24545730 (-) NM_026520 - 124 24544571 68034 2900009I07Rik 2410124L17Rik RIKEN cDNA 2900009I07 gene MGI:1915284 Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538 19 19 C1 FAM122A 116224 0 tttttctttccttgttcttcccc tgttcgtttcttccgcaaatagt 1 3 19 1.1.1.1.19.3 BCBC-5A-0 14092764 P100276 Hspe1 ProximalPromoter P100276 ProximalPromoter Unique Tile chr1:55031988-55033043 (+) NM_008303 + 110 55032933 15528 Hspe1 10kDa|MGC117526|mt-cpn10 heat shock protein 1 (chaperonin 10) MGI:104680 Mm.215667 1 1 C1 HSPE1 3336 NM_010477 - 375 55032363 15510 Hspd1 1 ccgagcaaggtcaaagtgaac tcctattagtcccaaagcgca 1 4 1 1.1.1.1.1.4 BCBC-5A-0 14092783 P101026 Sdc4 ProximalPromoter P101026 ProximalPromoter Unique Tile chr2:164134630-164135707 (-) NM_011521 - 239 164134391 20971 Sdc4 AA959608|AW108331|Synd4|ryudocan|syndecan-4 syndecan 4 MGI:1349164 Mm.130721; Mm.3815; Mm.130721; Mm.3815; Mm.130721; Mm.3815; Mm.130721; Mm.3815; Mm.130721; Mm.3815; Mm.130721; Mm.3815; Mm.130721; Mm.3815; Mm.130721; Mm.3815; Mm.130721; Mm.3815; Mm.130721; Mm.3815 2 2 H3|2 94.0 cM SDC4 6385 NM_025575 + 16493 164152200 66460 2610042O14Rik 0 cccacggtcagtattggaaaa cgatctactgcgaggcagtct 1 4 2 1.1.1.1.2.4 BCBC-5A-0 14092802 P102159 Ccdc70 ProximalPromoter P102159 ProximalPromoter Unique Tile chr8:23464287-23465285 (-) NM_026459 + 29145 23436140 67929 Ccdc70 1700112P19Rik coiled-coil domain containing 70 MGI:1915179 Mm.60688 8 8 A3 CCDC70 83446 0 tgtcactttgaggtgtctttcca gaagctgtccttcctttttgtca 1 4 3 1.1.1.1.3.4 BCBC-5A-0 14092821 P102909 Kcnj11 ProximalPromoter P102909 ProximalPromoter Unique Tile chr7:45968471-45969418 (-) NM_010602 - 192 45968279 16514 Kcnj11 AI842722|AW491124|Kir6.2|mBIR potassium inwardly rectifying channel, subfamily J, member 11 MGI:107501 Mm.333863 7 7 B3|7 41.0 cM KCNJ11 3767 NM_153057 + 45844 45922627 211548 Nomo1 1 aaccctcttaaaactcagggacg tccttctctagcccttgtcctct 1 4 4 1.1.1.1.4.4 BCBC-5A-0 14092840 P103749 ProximalPromoter P103749 ProximalPromoter No Hits Tile 0 tgagcctttgtgtcccatatctt gctatcggatgcaagaaggtaga 1 4 5 1.1.1.1.5.4 BCBC-5A-0 14092859 P104583 Tomm40 DistalPromoter P104583 DistalPromoter Unique Tile chr7:18857856-18860023 (-) NM_016871 + 189 18859834 53333 Tomm40 AW539759|MGC118268|Mom35|Tom40 translocase of outer mitochondrial membrane 40 homolog (yeast) MGI:1858259 Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870 7 7 A3 TOMM40 10452 NM_009696 - 302 18857554 11816 Apoe 0 gctgtacacaggctcagaaagga aagaaaagagctggcagcctaaa 1 4 6 1.1.1.1.6.4 BCBC-5A-0 14092878 P104949 Tcf4 DistalPromoter P104949 DistalPromoter Unique Tile chr18:69466554-69468471 (+) NM_013685 + 1418 69469889 21413 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|Hnf-4|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4 transcription factor 4 MGI:98506 Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269 18 - TCF4 6925 0 gcttcccagtgctagagatcaca tttgccataaaatgcagaggcta 1 4 7 1.1.1.1.7.4 BCBC-5A-0 14092897 P105495 3632451O06Rik DistalPromoter P105495 DistalPromoter Unique Tile chr14:48706697-48708605 (-) NM_026142 - 1394 48705303 67419 3632451O06Rik AU067705 RIKEN cDNA 3632451O06 gene MGI:1914669 Mm.318710 14 14 C1 0 acagagccaagagttgaccagtg ctcttgccatgacactccaaagt 1 4 8 1.1.1.1.8.4 BCBC-5A-0 14092916 P000792 Blank P000792 Buffer Control Negative Blank 1 4 9 1.1.1.1.9.4 BCBC-5A-0 14092935 P203566 Efemp1 ProximalPromoter P203566 ProximalPromoter Unique Tile chr11:28766658-28767617 (+) NM_146015 + 155 28767772 216616 Efemp1 MGC37612 epidermal growth factor-containing fibulin-like extracellular matrix protein 1 MGI:1339998 Mm.44176 11 11 A4 EFEMP1 2202 1 acatagcatggccaaggttctaa cagagggtggagtgtggtatagg 1 4 10 1.1.1.1.10.4 BCBC-5A-0 14092954 P201494 2810403A07Rik ProximalPromoter P201494 ProximalPromoter Unique Tile chr3:88770417-88771474 (+) NM_028814 + 268 88771742 74200 2810403A07Rik A430106P18Rik|AI256352|AI451678 RIKEN cDNA 2810403A07 gene MGI:1921450 Mm.251800; Mm.431112; Mm.251800; Mm.431112; Mm.251800; Mm.431112; Mm.251800; Mm.431112; Mm.251800; Mm.431112; Mm.251800; Mm.431112; Mm.251800; Mm.431112; Mm.251800; Mm.431112; Mm.251800; Mm.431112; Mm.251800; Mm.431112; Mm.251800; Mm.431112; Mm.251800; Mm.431112; Mm.251800; Mm.431112 3 3 F1 KIAA0907 22889 NM_009069 + 31316 88802790 19769 Rit1 2 cctaaaagatcaagggagcacct agacaagtcagaaaatgaagccg 1 4 11 1.1.1.1.11.4 BCBC-5A-0 14092973 P203808 Mrpl32 ProximalPromoter P203808 ProximalPromoter Unique Tile chr13:14404992-14405969 (-) NM_029271 - 171 14405163 75398 Mrpl32 0610033O15Rik mitochondrial ribosomal protein L32 MGI:2137226 Mm.36511 13 13 A2 MRPL32 64983 NM_008944 + 400 14405392 19166 Psma2 0 aaaaacttgacaggaaatcagcg tttccacgaactctctccttacg 1 4 12 1.1.1.1.12.4 BCBC-5A-0 14092992 P201354 2510003E04Rik ProximalPromoter P201354 ProximalPromoter Unique Tile chr10:61973929-61974891 (-) NM_028197 - 115 61973814 72320 2510003E04Rik 0710007C18Rik|MGC107132|mKIAA1279 RIKEN cDNA 2510003E04 gene MGI:1919570 Mm.258955 10 10 B4 KIAA1279 26128 NM_019553 - 22724 61997615 56200 Ddx21 0 actctctccaatgctcaacaagg aacgaagctgtcagggaatacag 1 4 13 1.1.1.1.13.4 BCBC-5A-0 14093011 P205793 Pitpnm2 ProximalPromoter P205793 ProximalPromoter Unique Tile chr5:124450244-124451145 (-) NM_011256 - 2444 124447800 19679 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 MGI:1336192 Mm.44261 5 5 F|5 68.0 cM PITPNM2 57605 0 tatttgtggcgctgaacactcta tctcagggaaccaaacagatagc 1 4 14 1.1.1.1.14.4 BCBC-5A-0 14093030 P201596 Ints10 ProximalPromoter P201596 ProximalPromoter Unique Tile chr8:71721826-71722892 (+) NM_027590 + 50 71722942 70885 Ints10 4921521J11Rik|AI462004 integrator complex subunit 10 MGI:1918135 Mm.252421 8 8 C1 INTS10 55174 0 acaaagcttcatccaagaactgc tatggaaactacggagacctgga 1 4 15 1.1.1.1.15.4 BCBC-5A-0 14093049 P200985 Hist1h2be ProximalPromoter P200985 ProximalPromoter Unique Tile chr13:23628448-23629514 (-) NM_178194 - 141 23628589 319179 Hist1h2be - histone 1, H2be MGI:2448380 Mm.170587 13 13 A2-A3 HIST1H2BE 8344 NM_015787 - 509 23630023 50709 Hist1h1e 0 gcaccaagaagactccaaagaaa tgtttgttgatggcagcttctaa 1 4 16 1.1.1.1.16.4 BCBC-5A-0 14093068 P200281 2300006N05Rik ProximalPromoter P200281 ProximalPromoter Unique Tile chr11:99631690-99632609 (-) NM_027087 - 5708 99625982 69464 2300006N05Rik - RIKEN cDNA 2300006N05 gene MGI:1916714 Mm.158279 11 11 D NM_001013823 - 35086 99667695 435285 LOC435285 0 aaaagcatctaggctttatgggc catggtgttagaggtggaggttc 1 4 17 1.1.1.1.17.4 BCBC-5A-0 14093087 P210660 1110029E03Rik ProximalPromoter P210660 ProximalPromoter Unique Tile chr4:43598961-43600035 (+) NM_172866 + 7 43600028 242406 1110029E03Rik AI527196|F730001J03|mKIAA0258 RIKEN cDNA 1110029E03 gene MGI:1915956 Mm.259311 4 4 B1 KIAA0258 9827 NM_172692 - 386 43599649 230101 Gba2 0 ctcaaaaactgcagggctaaaga ttcctttgtcacatttcagggtt 1 4 18 1.1.1.1.18.4 BCBC-5A-0 14093106 P208006 B230118H07Rik ProximalPromoter P208006 ProximalPromoter Unique Tile chr2:101429861-101430832 (-) NM_026592 - 32 101429829 68170 B230118H07Rik NWC RIKEN cDNA B230118H07 gene MGI:1915420 Mm.31263 2 2 E2|2 56.0 cM C11orf74 119710 NM_009020 + 4275 101425586 19374 Rag2 0 acggtatcgtttctggcaataga acggattcctgggaaatgtagtt 1 4 19 1.1.1.1.19.4 BCBC-5A-0 14092765 P100210 Gata4 ProximalPromoter P100210 ProximalPromoter Unique Tile chr14:62199991-62201017 (-) NM_008092 - 621 62199370 14463 Gata4 Gata-4 GATA binding protein 4 MGI:95664 Mm.247669 14 14 D1|14 28.0 cM GATA4 2626 0 cagaggagatgttgtgggagg cgacacttcttcccactcctg 1 5 1 1.1.1.1.1.5 BCBC-5A-0 14092784 P101050 ProximalPromoter P101050 ProximalPromoter Unique Tile chr1:81621963-81622880 (-) 0 gccatctctctcacacccatc gagcctcagtttgcttgctgt 1 5 2 1.1.1.1.2.5 BCBC-5A-0 14092803 P102183 Canx ProximalPromoter P102183 ProximalPromoter Unique Tile chr11:50155678-50156736 (-) NM_007597 - 13336 50169014 12330 Canx 1110069N15Rik|AI988026|CNX|D11Ertd153e calnexin MGI:88261 Mm.248827 11 11 B1.3|11 30.0 cM CANX 821 NM_175334 - 45387 50110291 103806 Maml1 0 ctgaagtgaatgaggattttggg aaaggcctgtctgaactgtgaag 1 5 3 1.1.1.1.3.5 BCBC-5A-0 14092822 P102933 Mafg ProximalPromoter P102933 ProximalPromoter Unique Tile chr11:120445905-120446875 (-) NM_010756 - 3583 120449488 17134 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) MGI:96911 Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664; Mm.268010; Mm.292957; Mm.393664 11 11 E2|11 75.0 cM MAFG 4097 NM_153056 - 4845 120441060 209011 Sirt7 0 gtaggagggacctgttttgcttt cacctttaaggccttgtttcctt 1 5 4 1.1.1.1.4.5 BCBC-5A-0 14092841 P104055 C1s ProximalPromoter P104055 ProximalPromoter Unique Tile chr6:124507733-124508675 (-) NM_144938 - 167 124507900 50908 C1s AA959438|AI255193|AI327365|C1sa|MGC132830|MGC37773 complement component 1, s subcomponent MGI:1355312 Mm.219527 6 6 F2 NM_023143 + 29436 124478297 50909 C1r 0 cttacaggcattaaccaccttgc ctacatgtgagaacccgtgtctg 1 5 5 1.1.1.1.5.5 BCBC-5A-0 14092860 P104607 Casp6 DistalPromoter P104607 DistalPromoter Unique Tile chr3:129894148-129895992 (+) NM_009811 + 2507 129893485 12368 Casp6 Mch2|mCASP-6 caspase 6 MGI:1312921 Mm.281379 3 3 H1 CASP6 839 NM_183423;NM_023196; + 20943 129873205 66350 Pla2g12a 0 ttggacacacagggtctagtggt gccagtgagtgttagaaggctga 1 5 6 1.1.1.1.6.5 BCBC-5A-0 14092879 P104973 Sfrp1 DistalPromoter P104973 DistalPromoter Unique Tile chr8:24873596-24875402 (+) NM_013834 + 1660 24877062 20377 Sfrp1 2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1 secreted frizzled-related sequence protein 1 MGI:892014 Mm.281691 8 8 A2|8 9.5 cM SFRP1 6422 0 cttcttggagtaggtgtggcctt attctttccaagttcgcgtcttc 1 5 7 1.1.1.1.7.5 BCBC-5A-0 14092898 P105519 2510049I19Rik DistalPromoter P105519 DistalPromoter Unique Tile chr8:75145493-75147660 (+) NM_026455 + 1058 75148718 67922 2510049I19Rik AW822030 RIKEN cDNA 2510049I19 gene MGI:1915172 Mm.28327 8 8 B3.3 FAM32A 26017 NM_007456 + 21460 75169120 11767 Ap1m1 0 agagagagagaagcaggagcagg gctatgctgttgtgaattcaggg 1 5 8 1.1.1.1.8.5 BCBC-5A-0 14092917 P106514 Eif4g1 DistalPromoter P106514 DistalPromoter Unique Tile chr16:20593770-20595749 (+) NM_001005331;NM_145941; + 9387 20586362 208643 Eif4g1 E030015G23Rik|MGC37551|MGC90776|eIF4GI eukaryotic translation initiation factor 4, gamma 1 MGI:2384784 Mm.260256 16 16 B1 EIF4G1 1981 NM_133778 + 12819 20608568 78408 2900046G09Rik 0 ggcattgtggcctagtgtgttag cacagagaagttgggctctgaaa 1 5 9 1.1.1.1.9.5 BCBC-5A-0 14092936 P203590 Vtcn1 ProximalPromoter P203590 ProximalPromoter Unique Tile chr3:100953257-100954313 (+) NM_178594 + 256 100954569 242122 Vtcn1 B7-H4|B7S1|B7h4|B7x|BC032925|MGC41287 V-set domain containing T cell activation inhibitor 1 MGI:3039619 Mm.137467 3 3 F2.2 VTCN1 79679 0 aataattgtgtggttggggtcag aaggccacaaggaggatctaaac 1 5 10 1.1.1.1.10.5 BCBC-5A-0 14092955 P201518 ProximalPromoter P201518 ProximalPromoter Unique Tile chrX:108716627-108717639 (+) 1 tttcttcttccgcttcttcctct ctacatgctgaggttgcattacg 1 5 11 1.1.1.1.11.5 BCBC-5A-0 14092974 P203833 Frmd6 ProximalPromoter P203833 ProximalPromoter Unique Tile chr12:71743238-71744308 (+) NM_028127 + 190 71744118 319710 Frmd6 2610019M19Rik|4930488L10Rik|AW212977 FERM domain containing 6 MGI:2442579 Mm.2962 12 12 C3 FRMD6 122786 1 cgactaccaaaaggagcaaagaa agaaagaagaaagacgccgagag 1 5 12 1.1.1.1.12.5 BCBC-5A-0 14092993 P204482 Grin2a ProximalPromoter P204482 ProximalPromoter Unique Tile chr16:9908010-9908655 (-) NM_008170 - 1899 9906111 14811 Grin2a NMDAR2A|NR2A glutamate receptor, ionotropic, NMDA2A (epsilon 1) MGI:95820 Mm.2953 16 16 A1|16 3.4 cM GRIN2A 2903 1 acacacacactcacacactcacg tgataaccagagctcctttcagg 1 5 13 1.1.1.1.13.5 BCBC-5A-0 14093012 P205818 Ccl1 ProximalPromoter P205818 ProximalPromoter Unique Tile chr11:81996165-81997218 (-) NM_011329 - 158 81996007 20290 Ccl1 BF534335|I-309|Scya1|Tca-3 chemokine (C-C motif) ligand 1 MGI:98258 Mm.1283 11 11 C|11 47.32 cM CCL1 6346 0 ctgagtgaagggtgttcctctgt gaggtatgtttgggtgcctagtg 1 5 14 1.1.1.1.14.5 BCBC-5A-0 14093031 P201620 Galm ProximalPromoter P201620 ProximalPromoter Unique Tile chr17:80034917-80035822 (+) NM_176963 + 26 80035796 319625 Galm A530057M15Rik|AU015645|AU020959 galactose mutarotase MGI:2442420 Mm.29098 17 17 E3 GALM 130589 0 ctgctgcaagctctttttctttc ccagttgagtttgctggtctttt 1 5 15 1.1.1.1.15.5 BCBC-5A-0 14093050 P201009 Wiz ProximalPromoter P201009 ProximalPromoter Unique Tile chr17:32135565-32136654 (-) NM_011717;NM_212438; - 14472 32121093 22404 Wiz - widely-interspaced zinc finger motifs MGI:1332638 Mm.274948 17 17 B2 WIZ 58525 NM_021319 - 15132 32151786 57757 Pglyrp2 0 tgtcacatgcttggttctcaact gaacatcttggataaatgctggc 1 5 16 1.1.1.1.16.5 BCBC-5A-0 14093069 P200214 Zfp535 ProximalPromoter P200214 ProximalPromoter Unique Tile chr11:65622170-65623098 (+) NM_026107 + 340 65623438 52712 Zfp535 1700128E15Rik|D11Ertd714e|KOX11 zinc finger protein 535 MGI:1289293 Mm.340052 11 11 B3|11 33.0 cM ZNF18 7566 NM_009157 - 17678 65604492 26398 Map2k4 0 ccagagcattgcatgtgtagttc cctgtccaaatccaggtattcag 1 5 17 1.1.1.1.17.5 BCBC-5A-0 14093088 P210685 4933405O20Rik ProximalPromoter P210685 ProximalPromoter Unique Tile chr7:50466238-50467315 (+) NM_172901 + 84 50467231 243996 4933405O20Rik AV046776 RIKEN cDNA 4933405O20 gene MGI:2142174 Mm.383528 7 7 B4 0 tctgtgcctctgtaattgttgga actacctccctagaatggccaag 1 5 18 1.1.1.1.18.5 BCBC-5A-0 14093107 P208030 Trmt12 ProximalPromoter P208030 ProximalPromoter Unique Tile chr15:58701679-58702763 (+) NM_026642 + 7 58702756 68260 Trmt12 4632406N01Rik|AI449275 tRNA methyltranferase 12 homolog (S. cerevisiae) MGI:1915510 Mm.278805 15 15 D1 TRMT12 55039 NM_175226 + 16609 58719372 75841 Rnf139 0 agggattactgggtaggtggaaa tacaaccggaagagctaaactcg 1 5 19 1.1.1.1.19.5 BCBC-5A-0 14092766 P100234 Gsta1 ProximalPromoter P100234 ProximalPromoter Duplication Tile chr9:78016981-78017894 (+) NM_008181 + 1525 78016369 14857 Gsta1 Gst2-1 glutathione S-transferase, alpha 1 (Ya) MGI:1095417 Mm.197422 9 9 E1|9 43.0 cM NM_010357 + 39266 77977715 14860 Gsta4 0 ccaaacccacagagaacttgc tgaaaaggcagagaggtcagc 1 6 1 1.1.1.1.1.6 BCBC-5A-0 14092785 P101356 Sec61a1 ProximalPromoter P101356 ProximalPromoter Unique Tile chr6:88484806-88485789 (-) NM_016906 - 365 88484441 53421 Sec61a1 AA408394|AA410007|Sec61a Sec61 alpha 1 subunit (S. cerevisiae) MGI:1858417 Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111; Mm.28375; Mm.401111 6 6 D1 SEC61a1 29927 0 tcgcttgcttttcttccagag gcagtgtgctgaatcctaccc 1 6 2 1.1.1.1.2.6 BCBC-5A-0 14092804 P102207 Col12a1 ProximalPromoter P102207 ProximalPromoter Unique Tile chr9:79504024-79505010 (-) NM_007730 - 338 79504362 12816 Col12a1 AW743884 procollagen, type XII, alpha 1 MGI:88448 Mm.3819 9 9 E1|9 43.0 cM COL12A1 1303 NM_009945 - 40362 79545372 12866 Cox7a2 1 aatcgaagcctcccatctctatc agaagccactttccccagttatc 1 6 3 1.1.1.1.3.6 BCBC-5A-0 14092823 P102957 Nfkbib ProximalPromoter P102957 ProximalPromoter Unique Tile chr7:28475307-28476170 (-) NM_010908 - 23 28475284 18036 Nfkbib IKB-beta|IkB|IkBb|MGC36057 nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, beta MGI:104752 Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654 7 7 A3-B3 NFKBIB 4793 NM_022432 + 235 28475542 64383 Sirt2 0 tggactgaaggaaggtttcagag gttttaaatagctacaccccgcc 1 6 4 1.1.1.1.4.6 BCBC-5A-0 14092842 P104079 Col6a2 ProximalPromoter P104079 ProximalPromoter Unique Tile chr10:76066960-76067946 (-) NM_146007 - 70 76067030 12834 Col6a2 Col6a-2|MGC36205 procollagen, type VI, alpha 2 MGI:88460 Mm.1949 10 10 41.1 cM COL6A2 1292 NM_080845 + 47559 76019401 14317 Ftcd 1 agaacacagagtgggactggaag agcttacctggcttggagaagat 1 6 5 1.1.1.1.5.6 BCBC-5A-0 14092861 P104541 Tpp2 DistalPromoter P104541 DistalPromoter Unique Tile chr1:43875767-43877648 (+) NM_009418 + 904 43878552 22019 Tpp2 TppII tripeptidyl peptidase II MGI:102724 Mm.234139 1 1 C1.1|1 27.0 cM TPP2 7174 0 actagaaagtcccagatgccagg cccattgacaaactcaagacacc 1 6 6 1.1.1.1.6.6 BCBC-5A-0 14092880 P104997 Hist1h1c DistalPromoter P104997 DistalPromoter Unique Tile chr13:23742716-23744612 (+) NM_015786 + 1659 23746271 50708 Hist1h1c 0610008C09Rik|H1.2|H1c|H1f2|H1var1|His1a|MGC107646 histone 1, H1c MGI:1931526 Mm.193539 13 13 A2-A3 HIST1H1C 3006 NM_175653 - 8374 23752986 319148 Hist1h3c 0 ccacaaaacaaccatgtgtgaga tcaagcaccttcgtcataccaat 1 6 7 1.1.1.1.7.6 BCBC-5A-0 14092899 P105543 Ivns1abp DistalPromoter P105543 DistalPromoter Unique Tile chr1:153103216-153105236 (+) NM_001039512;NM_054102;NM_001039511; + 1479 153106715 117198 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein MGI:2152389 Mm.33764 1 1 G2 IVNS1ABP 10625 0 aatggtttgcttcattctggtga gcattttggccttcagtatttcc 1 6 8 1.1.1.1.8.6 BCBC-5A-0 14092918 P106536 Eif2c3 DistalPromoter P106536 DistalPromoter Unique Tile chr4:125933175-125935365 (-) NM_153402 - 1477 125931698 214150 Eif2c3 AW048688|Ago3|C130014L07Rik eukaryotic translation initiation factor 2C, 3 MGI:2446634 Mm.208174 4 4 D2.2 EIF2C3 192669 NM_153403 - 35360 125970725 236511 Eif2c1 0 gcctagaactctgcattgggatt tttcaaatgtgtgtggtggtgtc 1 6 9 1.1.1.1.9.6 BCBC-5A-0 14092937 P207013 Pdcd1lg2 ProximalPromoter P207013 ProximalPromoter Unique Tile chr19:29475849-29476934 (+) NM_021396 + 22 29476956 58205 Pdcd1lg2 B7-DC|Btdc|F730015O22Rik|MGC124039|MGC124040|PD-L2 programmed cell death 1 ligand 2 MGI:1930125 Mm.116737 19 19 C2-C3 PDCD1LG2 80380 NM_021893 + 42398 29433451 60533 Cd274 0 gcaaaagcagagagcaagaaaag gaacaaaaatgatgtggtcacga 1 6 10 1.1.1.1.10.6 BCBC-5A-0 14092956 P201542 Sema4g ProximalPromoter P201542 ProximalPromoter Unique Tile chr19:45041476-45042471 (+) NM_011976 + 183 45042654 26456 Sema4g AI507908|AW554132 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G MGI:1347047 Mm.34404 19 19 C3 SEMA4G 57715 NM_053164 - 17273 45059744 94067 Mrpl43 0 aggctctcatcagtttcatacgc aatagacccgatttgtgggagat 1 6 11 1.1.1.1.11.6 BCBC-5A-0 14092975 P203857 BC055111 ProximalPromoter P203857 ProximalPromoter Unique Tile chr4:106115316-106116217 (-) NM_183182 - 146 106115170 242602 BC055111 MGC58608 cDNA sequence BC055111 MGI:2681853 Mm.235591 4 4 C7 C1orf177 163747 NM_177667 + 4163 106120380 230576 Ttc22 0 tcgctctatcagctgtgactctg cactttatattcccaatgctgcc 1 6 12 1.1.1.1.12.6 BCBC-5A-0 14092994 P204506 Has1 ProximalPromoter P204506 ProximalPromoter End Repeat Tile chr17:17559717-17560616 (-) NM_008215 - 89 17559806 15116 Has1 HAS hyaluronan synthase1 MGI:106590 Mm.255701 17 17 A3.2|17 10.0 cM HAS1 3036 NM_029205 + 24036 17535681 75202 4930546H06Rik 1 ggatcactagtcttctggcctca cacacacacacacacacacacac 1 6 13 1.1.1.1.13.6 BCBC-5A-0 14093013 P205751 Prlpc1 ProximalPromoter P205751 ProximalPromoter Unique Tile chr13:27446040-27447021 (-) NM_011167 - 22 27446062 19112 Prlpc1 PLP-Ca|Prlpc prolactin-like protein C 1 MGI:1332225 Mm.142728 13 13 A3.1|13 14.0 cM NM_025532 - 47729 27398311 66392 Prlpk 2 atcgtggagcatgtgtccttatt aatagcagtgccatcgttaggag 1 6 14 1.1.1.1.14.6 BCBC-5A-0 14093032 P201644 Pilra ProximalPromoter P201644 ProximalPromoter Unique Tile chr5:138065968-138066929 (-) NM_153510 - 15 138065953 231805 Pilra AV021745|FDF03 paired immunoglobin-like type 2 receptor alpha MGI:2450529 Mm.379385 5 5 G2 PILRA 29992 NM_133209 - 20857 138087786 170741 Pilrb 0 gcccacttagtccaaagaaggtt agggtaaagtgagacagatcccc 1 6 15 1.1.1.1.15.6 BCBC-5A-0 14093051 P201033 Zfp160 ProximalPromoter P201033 ProximalPromoter Unique Tile chr17:20712379-20713423 (+) NM_145483 + 247 20713670 224585 Zfp160 6720480D16Rik|F11|HKr18|HZF5|KR18|mKIAA1611|mszf47 zinc finger protein 160 MGI:108187 Mm.296036 17 17 A3.2|17 10.2 cM NM_134202 - 12996 20699383 171236 V1rf5 0 aggacatttgcagagaggatgtc agaggacctgaatgctgagaatg 1 6 16 1.1.1.1.16.6 BCBC-5A-0 14093070 P200238 ProximalPromoter P200238 ProximalPromoter Unique Tile chr14:118142130-118143086 (-) 0 cacaatacaggatccgtcctagc cttcttgtcacactttcccgtct 1 6 17 1.1.1.1.17.6 BCBC-5A-0 14093089 P210799 2700007P21Rik ProximalPromoter P210799 ProximalPromoter Unique Tile chr2:106775268-106776283 (-) NM_173750;NM_001025102; - 32 106775236 212772 2700007P21Rik 4930448O08Rik RIKEN cDNA 2700007P21 gene MGI:1926020 Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813; Mm.268092; Mm.381231; Mm.430813 2 2 E3 C11orf46 120534 0 attagacttcctcctctttgcgg cttgtaccatggagaggaaccag 1 6 18 1.1.1.1.18.6 BCBC-5A-0 14093108 P208054 Etfb ProximalPromoter P208054 ProximalPromoter Unique Tile chr7:43310838-43311842 (+) NM_026695 + 202 43312044 110826 Etfb 0610009I16Rik|2810441H06Rik electron transferring flavoprotein, beta polypeptide MGI:106098 Mm.30200 7 7 B2|7 23.0 cM ETFB 2109 NM_024253 + 5779 43305059 72310 Nkg7 0 ctcctggtcctactttttcggat gagtgaagtttgctgagggctta 1 6 19 1.1.1.1.19.6 BCBC-5A-0 14092767 P100258 ProximalPromoter P100258 ProximalPromoter Unique Tile chr12:49435931-49436901 (-) 0 agattgccatccccttcaact cggaccctagaatgcaagatg 1 7 1 1.1.1.1.1.7 BCBC-5A-0 14092786 P101380 Snx3 ProximalPromoter P101380 ProximalPromoter Unique Tile chr10:42189310-42190335 (+) NM_017472 + 110 42190445 54198 Snx3 MGC151262|MGC151266|SDP3 sorting nexin 3 MGI:1860188 Mm.277870 10 10 B2|10 25.5 cM SNX3 8724 NM_145743 - 22480 42166830 215951 Lace1 0 cctgagtctttccctggtcct tttctgacccagcttctctgc 1 7 2 1.1.1.1.2.7 BCBC-5A-0 14092805 P102141 Apoa4 ProximalPromoter P102141 ProximalPromoter Unique Tile chr9:45990866-45991897 (+) NM_007468 + 59 45991838 11808 Apoa4 Apoa-4 apolipoprotein A-IV MGI:88051 Mm.4533 9 9 A5.2|9 27.0 cM APOA4 337 NM_023114 - 4574 45986292 11814 Apoc3 0 gctgtcatttcacaaatgctgtc cagagggaagcagtcttcttgag 1 7 3 1.1.1.1.3.7 BCBC-5A-0 14092824 P102981 Pck1 ProximalPromoter P102981 ProximalPromoter Unique Tile chr2:172795096-172796125 (+) NM_011044 + 98 172796027 18534 Pck1 AI265463|PEPCK|Pck-1 phosphoenolpyruvate carboxykinase 1, cytosolic MGI:97501 Mm.266867 2 2 C1-qter|2 103.0 cM PCK1 5105 0 ctccaagggtgatggtgtctaac aatgaccctgcctacctttcttc 1 7 4 1.1.1.1.4.7 BCBC-5A-0 14092843 P104103 Pde5a ProximalPromoter P104103 ProximalPromoter Unique Tile chr3:122765316-122766406 (+) NM_153422 + 45198 122721208 242202 Pde5a CGB-PDE|CN5N|PDE5A1|Pde5 phosphodiesterase 5A, cGMP-specific MGI:2651499 Mm.134911 3 3 G1 PDE5A 8654 0 taaaccagacatgcttgacctga atttcctagagcccaaacctcac 1 7 5 1.1.1.1.5.7 BCBC-5A-0 14092862 P104565 Map3k12 DistalPromoter P104565 DistalPromoter Unique Tile chr15:102334677-102336542 (-) NM_009582 - 1075 102333602 26404 Map3k12 DLK|MUK|Zpk mitogen activated protein kinase kinase kinase 12 MGI:1346881 Mm.172897 15 15 F3 MAP3K12 7786 NM_009319 + 9950 102346492 21357 Tarbp2 0 catactcctctgtgacaccccac tcttggctgtgcagttgtcatta 1 7 6 1.1.1.1.6.7 BCBC-5A-0 14092881 P105111 Gas6 DistalPromoter P105111 DistalPromoter Unique Tile chr8:13495953-13497752 (-) NM_019521 - 1470 13494483 14456 Gas6 Gas-6 growth arrest specific 6 MGI:95660 Mm.3982 8 8 A1.1|8 5.0 cM GAS6 2621 0 tgatcgacaagcagtcaatgaaa caaccgagtcatcaacacaaaca 1 7 7 1.1.1.1.7.7 BCBC-5A-0 14092900 P000772 Blank P000772 Buffer Control Negative Blank 1 7 8 1.1.1.1.8.7 BCBC-5A-0 14092919 P106558 C1sb DistalPromoter P106558 DistalPromoter Unique Tile chr6:124602725-124604740 (-) NM_173864 - 1021 124601704 317677 C1sb - complement component C1SB Mm.391511 6 6 F2 NM_145130 + 24006 124628746 14792 Mboat5 0 tggaacttgctatgtagaccgga gggctgggagatcacaatctagt 1 7 9 1.1.1.1.9.7 BCBC-5A-0 14092938 P207040 Trim54 ProximalPromoter P207040 ProximalPromoter Unique Tile chr5:31392388-31393331 (+) NM_021447 + 39 31393292 58522 Trim54 4930486E09Rik|4930566I02Rik|MGC130201|MGC130202|MURF|MURF-3|Rnf30 tripartite motif-containing 54 MGI:1889623 Mm.143796; Mm.402047; Mm.143796; Mm.402047; Mm.143796; Mm.402047; Mm.143796; Mm.402047; Mm.143796; Mm.402047 5 5 B1 TRIM54 57159 NM_177677 + 7467 31384921 231098 Dnajc5g 0 ggggttgtttctctgtaaaggct cacccctgtctatttccagacac 1 7 10 1.1.1.1.10.7 BCBC-5A-0 14092957 P201475 A130050O07Rik ProximalPromoter P201475 ProximalPromoter Unique Tile chr1:139743426-139744357 (+) NM_177080 + 223 139744580 320138 A130050O07Rik - RIKEN cDNA A130050O07 gene MGI:2443458 Mm.207552 1 1 E4 0 ccttgctttcgtttatgttaccg tgatgaccaaagggaagagagag 1 7 11 1.1.1.1.11.7 BCBC-5A-0 14092976 P203881 Cacna2d2 ProximalPromoter P203881 ProximalPromoter Unique Tile chr9:107257011-107258076 (+) NM_020263 + 96 107257980 56808 Cacna2d2 Cacna2d|du|mKIAA0558|td|torpid calcium channel, voltage-dependent, alpha 2/delta subunit 2 MGI:1929813 Mm.273084 9 9 F1|9 60.0 cM CACNA2D2 9254 0 cgaaactgtgagtgcttctgcta cctcttctccacctccttctcc 1 7 12 1.1.1.1.12.7 BCBC-5A-0 14092995 P204530 ProximalPromoter P204530 ProximalPromoter Unique Tile chr6:114444041-114445099 (+) 0 aactcctgacaccaaattcctga accatggacaaaccagagaaaaa 1 7 13 1.1.1.1.13.7 BCBC-5A-0 14093014 P205775 Ptprr ProximalPromoter P205775 ProximalPromoter Unique Tile chr10:115421141-115422141 (+) NM_011217 + 367 115422508 19279 Ptprr Gmcp1|PTP-SL|PTPBR7|mPTP213 protein tyrosine phosphatase, receptor type, R MGI:109559 Mm.336316 10 10 A2 PTPRR 5801 0 cgaaccgtttgagagagagagag ctgaccagtttcccagtatgtcc 1 7 14 1.1.1.1.14.7 BCBC-5A-0 14093033 P206525 Oat ProximalPromoter P206525 ProximalPromoter Unique Tile chr7:132414911-132415856 (-) NM_016978 - 237 132414674 18242 Oat AI194874 ornithine aminotransferase MGI:97394 Mm.13694 7 7 F3|7 63.0 cM OAT 4942 NM_009123 - 22124 132437980 20231 Nkx1-2 0 ctctttcccatcccactttcttt tggagcagttcgctttcttttac 1 7 15 1.1.1.1.15.7 BCBC-5A-0 14093052 P201058 ProximalPromoter P201058 ProximalPromoter Unique Tile chr3:39199846-39200941 (+) 0 ggtacaaatggagttgaagcacc atctcatctggaccctgactctg 1 7 16 1.1.1.1.16.7 BCBC-5A-0 14093071 P200262 ProximalPromoter P200262 ProximalPromoter Intra Repeat: LINE Tile chr10:23194989-23195966 (+) 0 gaatcaccatgcctgacctaaag tagtggagcatgtgtccttctca 1 7 17 1.1.1.1.17.7 BCBC-5A-0 14093090 P210823 A930002I21Rik ProximalPromoter P210823 ProximalPromoter Unique Tile chr3:107217876-107218867 (+) NM_175410 + 68 107218935 109226 A930002I21Rik - RIKEN cDNA A930002I21 gene MGI:1924480 Mm.133826 3 3 F2.3 NM_008417 + 10755 107229622 16490 Kcna2 0 tcttaggaaggctgaggatgttg gcagaagcaaaggagatgaaaaa 1 7 18 1.1.1.1.18.7 BCBC-5A-0 14093109 P207988 Atp5s ProximalPromoter P207988 ProximalPromoter Unique Tile chr12:70642679-70643644 (+) NM_026536 + 48 70643596 68055 Atp5s 1110015E18Rik|ATPW|facyor B ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s MGI:1915305 Mm.27844 12 12 C3 NM_145443 - 221 70643423 217666 L2hgdh 2 cattcgcatggtctaccttgtct cttcgccctagctcctcttactc 1 7 19 1.1.1.1.19.7 BCBC-5A-0 14092768 P100282 Cd79b ProximalPromoter P100282 ProximalPromoter Unique Tile chr11:106130584-106131528 (-) NM_008339 - 35 106130619 15985 Cd79b B29|Ig-beta|Igb|Igbeta CD79B antigen MGI:96431 Mm.2987 11 11 E1|11 65.0 cM CD79B 974 NM_008117 - 12684 106117900 14599 Gh 0 tgtagccctgcctatcctgaa tctgtctctgagcccaaggag 1 8 1 1.1.1.1.1.8 BCBC-5A-0 14092787 P101404 Ptf1a ProximalPromoter P101404 ProximalPromoter Unique Tile chr2:19361955-19362939 (+) NM_018809 + 477 19363416 19213 Ptf1a PTF1-p48|PTF1p48 pancreas specific transcription factor, 1a MGI:1328312 Mm.69647 2 2 A2 PTF1A 256297 0 atcagagggagcctaaccagc ctggactaggtttggggttcc 1 8 2 1.1.1.1.2.8 BCBC-5A-0 14092806 P102165 Barx1 ProximalPromoter P102165 ProximalPromoter Unique Tile chr13:48674545-48675369 (+) NM_007526 + 138 48675231 12022 Barx1 - BarH-like homeobox 1 MGI:103124 Mm.42241 13 13 A5|13 21.0 cM BARX1 56033 NM_207232 - 37035 48637510 218232 AW456874 1 cagactttttcacgcctctcatt gggagaaagaggatgaattacgg 1 8 3 1.1.1.1.3.8 BCBC-5A-0 14092825 P103287 ProximalPromoter P103287 ProximalPromoter Unique Tile chr8:38082802-38083769 (-) 0 ttgcttcccagtctgtagtctcc gcggaggttaaagatagatcgct 1 8 4 1.1.1.1.4.8 BCBC-5A-0 14092844 P104127 Aqp6 ProximalPromoter P104127 ProximalPromoter Unique Tile chr15:99428385-99429301 (+) NM_175087 + 132 99429433 11831 Aqp6 AI790337 aquaporin 6 MGI:1341204 Mm.202309 15 15 F1|15 56.9 cM AQP6 363 NM_009701 + 9570 99418815 11830 Aqp5 0 ggaaaggggtcaaagacacttct acactgctggccttagaaacaag 1 8 5 1.1.1.1.5.8 BCBC-5A-0 14092863 P104589 B2m DistalPromoter P104589 DistalPromoter Unique Tile chr2:121836240-121838408 (+) NM_009735 + 719 121839127 12010 B2m Ly-m11|beta2-m beta-2 microglobulin MGI:88127 Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473 2 2 F1-F3|2 69.0 cM B2M 567 NM_080510 + 13732 121852140 70928 Rnf36 0 agtgttcaccccaacaattcctt attcccttggggtttctgcttat 1 8 6 1.1.1.1.6.8 BCBC-5A-0 14092882 P105135 Ruvbl1 DistalPromoter P105135 DistalPromoter Unique Tile chr6:88427897-88429885 (+) NM_019685 + 1212 88431097 56505 Ruvbl1 2510009G06Rik|Pontin52|Tip49a RuvB-like protein 1 MGI:1928760 Mm.42195 6 6 D1 RUVBL1 8607 NM_023060 - 15717 88412180 65967 Eefsec 0 ggctggcttacagttcaaaggtt actggcctcaaactcagaaatcc 1 8 7 1.1.1.1.7.8 BCBC-5A-0 14092901 P105501 Uqcrb DistalPromoter P105501 DistalPromoter Unique Tile chr13:67341803-67343994 (-) NM_026219 - 704 67341099 67530 Uqcrb 2210415M14Rik|MGC107639|MGC35665|QP-C|QPC|UQBC|UQBP|UQPC ubiquinol-cytochrome c reductase binding protein MGI:1914780 Mm.379136 13 13 B3 UQCRB 7381 NM_008959 + 24584 67368578 19210 Ptdss1 1 agtagggctctggtctctgctgt ggcattgaaattgggtagagtcc 1 8 8 1.1.1.1.8.8 BCBC-5A-0 14092920 P000798 Blank P000798 Buffer Control Negative Blank 1 8 9 1.1.1.1.9.8 BCBC-5A-0 14092939 P207064 Treh ProximalPromoter P207064 ProximalPromoter Unique Tile chr9:44423032-44424057 (+) NM_021481 + 175 44424232 58866 Treh 2210412M19Rik trehalase (brush-border membrane glycoprotein) MGI:1926230 Mm.45380 9 9 A5.2 TREH 11181 0 tacctgctcgagacctctgattc tcagccactttcttccatttctc 1 8 10 1.1.1.1.10.8 BCBC-5A-0 14092958 P201500 Ric3 ProximalPromoter P201500 ProximalPromoter Unique Tile chr7:108874704-108875623 (-) NM_178780;NM_001038624; - 203 108874501 320360 Ric3 E130307J04Rik resistance to inhibitors of cholinesterase 3 homolog (C. elegans) MGI:2443887 Mm.71007 7 7 E3 RIC3 79608 0 gcaaagacaaattcaggtgttcc gcagttttgcacttctctccatt 1 8 11 1.1.1.1.11.8 BCBC-5A-0 14092977 P204290 Crygb ProximalPromoter P204290 ProximalPromoter Unique Tile chr1:65016500-65017460 (-) NM_144761 - 43 65016543 12965 Crygb Cryg-3|DGcry-3|Nop crystallin, gamma B MGI:88522 Mm.425031 1 1 C2|1 32.0 cM CRYGB 1419 NM_007775 - 8713 65007787 12966 Crygc 0 gcagaagggagatttaggctctc aaggtcagggttccaggacttac 1 8 12 1.1.1.1.12.8 BCBC-5A-0 14092996 P204554 Ifit3 ProximalPromoter P204554 ProximalPromoter Unique Tile chr19:34634944-34636014 (+) NM_010501 + 13513 34649527 15959 Ifit3 Ifi49|MGC107331 interferon-induced protein with tetratricopeptide repeats 3 MGI:1101055 Mm.426079 19 19 C3 IFIT3 3437 NM_008332 + 18002 34616942 15958 Ifit2 0 cgccagagattgtatagtcccac atagctcatcctctatcctcggg 1 8 13 1.1.1.1.13.8 BCBC-5A-0 14093015 P205800 Xpr1 ProximalPromoter P205800 ProximalPromoter Unique Tile chr1:157179875-157180916 (-) NM_011273 - 213 157179662 19775 Xpr1 Rmc-1|Rmc1|Sxv|Syg1|XR xenotropic and polytropic retrovirus receptor 1 MGI:97932 Mm.266215 1 1 G3|1 81.6 cM XPR1 9213 0 atccccagagttggagttagagg ctggagcaacaataatccacaca 1 8 14 1.1.1.1.14.8 BCBC-5A-0 14093034 P206549 Sept1 ProximalPromoter P206549 ProximalPromoter Unique Tile chr7:127009832-127010876 (-) NM_017461 - 231 127009601 54204 Sept1 Diff6|PNUTL3 septin 1 MGI:1858916 Mm.18 7 7 F4 SEPT1 1731 NM_016754 + 6961 127002871 17907 Mylpf 0 agatggcctattggttaacagca gagctgagtttgggtcctctgta 1 8 15 1.1.1.1.15.8 BCBC-5A-0 14093053 P200991 Mical2 ProximalPromoter P200991 ProximalPromoter Unique Tile chr7:112016267-112017170 (+) NM_177282 + 100 112017070 320878 Mical2 5330438E18Rik|9530064J02|KIAA0750|mKIAA0750 microtubule associated monoxygenase, calponin and LIM domain containing 2 MGI:2444947 Mm.52312 7 7 E3 MICAL2 9645 2 acatttatggactctgcattggg aacacctgcctttcttgtcctct 1 8 16 1.1.1.1.16.8 BCBC-5A-0 14093072 P200288 2310007F04Rik ProximalPromoter P200288 ProximalPromoter Unique Tile chr3:93017461-93018412 (+) NM_025501 + 24 93018388 66344 2310007F04Rik MGC144697 RIKEN cDNA 2310007F04 gene MGI:1913594 Mm.197669 3 3 F1 NM_001039594 - 5828 93011633 545548 LOC545548 0 tgtgtatatcacccatcacctgc gacagaagtccgtgtctgaggat 1 8 17 1.1.1.1.17.8 BCBC-5A-0 14093091 P001343 Blank P001343 Buffer Control Negative Blank 1 8 18 1.1.1.1.18.8 BCBC-5A-0 14093110 P208012 Mtap1b ProximalPromoter P208012 ProximalPromoter Unique Tile chr13:100604797-100605782 (-) NM_008634 - 11900 100616697 17755 Mtap1b A230055D22|AI843217|LC1|MAP1B|MAP5|Mtap-5|Mtap5 microtubule-associated protein 1 B MGI:1306778 Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787; Mm.4173; Mm.430787 13 13 D1|13 51.0 cM MAP1B 4131 0 tcatcctatgagactgaggagcc ttttcctttggggaatctctctc 1 8 19 1.1.1.1.19.8 BCBC-5A-0 14092769 P100588 Tnfaip2 ProximalPromoter P100588 ProximalPromoter Unique Tile chr12:111891905-111892852 (+) NM_009396 + 83 111892769 21928 Tnfaip2 Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 MGI:104960 Mm.255332 12 12 F1|12 56.0 cM TNFAIP2 7127 NM_028807 + 26509 111865396 74190 1200009I06Rik 0 aaagccagtcctttgagggag gatgtagagcgtggcttttgg 1 9 1 1.1.1.1.1.9 BCBC-5A-0 14092788 P101428 Lmna ProximalPromoter P101428 ProximalPromoter Unique Tile chr3:88579300-88580340 (-) NM_001002011;NM_019390; - 61 88579239 16905 Lmna - lamin A MGI:96794 Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683; Mm.243014; Mm.428683 3 3 F1|3 42.6 cM LMNA 4000 NM_013658 - 37694 88541606 20351 Sema4a 0 tacctgccttgcccacttcta tgcaaccctctacctggctaa 1 9 2 1.1.1.1.2.9 BCBC-5A-0 14092807 P102189 Ccnd1 ProximalPromoter P102189 ProximalPromoter Unique Tile chr7:144749591-144750527 (-) NM_007631 - 371 144749220 12443 Ccnd1 AI327039|Cyl-1|PRAD1|bcl-1 cyclin D1 MGI:88313 Mm.273049 7 7 F5|7 72.3 cM CCND1 595 NM_028184 + 25008 144724583 72284 Oraov1 1 aagtattccgtgggaaatgtgtg aaggaagaatgtatggaagggga 1 9 3 1.1.1.1.3.9 BCBC-5A-0 14092826 P103311 Scly ProximalPromoter P103311 ProximalPromoter Unique Tile chr1:93127509-93128608 (+) NM_016717 + 135 93128743 50880 Scly 9830169H08|SCL|Scly1|Scly2 selenocysteine lyase MGI:1355310 Mm.25724 1 1 D SCLY 51540 NM_001033292 + 23872 93152480 227357 Gm556 0 gtatgacagatggagcatcatgg agactaccttagtagggccaccg 1 9 4 1.1.1.1.4.9 BCBC-5A-0 14092845 P104061 Eif2b1 ProximalPromoter P104061 ProximalPromoter Unique Tile chr5:124840105-124841187 (-) NM_145371 - 430 124839675 209354 Eif2b1 26kDa|D5Ertd406e|EIF2B|EIF2BA|MGC6458 eukaryotic translation initiation factor 2B, subunit 1 (alpha) MGI:2384802 Mm.28839 5 5 F|5 68.0 cM EIF2B1 1967 NM_181410 + 317 124839788 209357 Gtf2h3 0 atggctattgctgctactcttgc gccctaatttttaggcagatgct 1 9 5 1.1.1.1.5.9 BCBC-5A-0 14092864 P104613 DistalPromoter P104613 DistalPromoter No Hits Tile 0 ccggcaacttgatttgtagactg tagcagtcctgcttcaacttcca 1 9 6 1.1.1.1.6.9 BCBC-5A-0 14092883 P105159 DistalPromoter P105159 DistalPromoter No Hits Tile 0 atttgagtggctgtggtcagaaa gaagtgggtgtaagggggatatg 1 9 7 1.1.1.1.7.9 BCBC-5A-0 14092902 P105525 2700060E02Rik DistalPromoter P105525 DistalPromoter Unique Tile chr14:18615985-18618101 (-) NM_026528 - 1466 18614519 68045 2700060E02Rik - RIKEN cDNA 2700060E02 gene MGI:1915295 Mm.21932 14 14 A3 C14orf166 51637 0 acttgttttgctcacgttttgga ggatttaagacccttcccattcc 1 9 8 1.1.1.1.8.9 BCBC-5A-0 14092921 P000876 Blank P000876 Buffer Control Negative Blank 1 9 9 1.1.1.1.9.9 BCBC-5A-0 14092940 P207088 Pxmp4 ProximalPromoter P207088 ProximalPromoter Unique Tile chr2:154295184-154296214 (-) NM_021534 - 70 154295114 59038 Pxmp4 3010018P03Rik|Pmp24 peroxisomal membrane protein 4 MGI:1891701 Mm.24673 2 2 H2 PXMP4 11264 NM_199304 + 8594 154304808 228807 Zfp341 0 ttctgcccatctttcttgtcttc tgagtctgccgtcaatcatagaa 1 9 10 1.1.1.1.10.9 BCBC-5A-0 14092959 P201524 A230091H23Rik ProximalPromoter P201524 ProximalPromoter Unique Tile chr18:62673142-62674233 (+) NM_177829 + 46 62674279 328971 A230091H23Rik - RIKEN cDNA A230091H23 gene MGI:3584533 Mm.312675 18 18 E1 NM_134136 - 150 62674083 107035 Fbxo38 0 aggatggacgacactgtacaaca agaaataccacgcttatcatggc 1 9 11 1.1.1.1.11.9 BCBC-5A-0 14092978 P204314 Dcn ProximalPromoter P204314 ProximalPromoter Unique Tile chr10:96908418-96909485 (+) NM_007833 + 2569 96912054 13179 Dcn DC|DSPG2|PG40|PGII|PGS2|SLRR1B|mDcn decorin MGI:94872 Mm.56769 10 10 C3|10 55.0 cM DCN 1634 0 cagaaaaatgcgagtcagaacct agccataccttttaatccgggta 1 9 12 1.1.1.1.12.9 BCBC-5A-0 14092997 P204488 Gspt2 ProximalPromoter P204488 ProximalPromoter Unique Tile chrX:90887523-90888564 (+) NM_008179 + 223 90888787 14853 Gspt2 MGC143748|MGC143749 G1 to S phase transition 2 MGI:1316727 Mm.20826 X X B1 GSPT2 23708 0 aacgttgtcctagggtcacaaaa tgacagaatgatttgaccacgtt 1 9 13 1.1.1.1.13.9 BCBC-5A-0 14093016 P205824 Selp ProximalPromoter P205824 ProximalPromoter Unique Tile chr1:165951129-165952068 (+) NM_011347 + 8308 165960376 20344 Selp CD62P|Grmp|MGC129336|MGC129337|P-selectin|PADGEM selectin, platelet MGI:98280 Mm.3337 1 1 H2.2|1 86.6 cM SELP 6403 NM_007976 + 36564 165988632 14067 F5 0 atggccaactgtatgaggtgagt ttaccatgtcctctctgatccgt 1 9 14 1.1.1.1.14.9 BCBC-5A-0 14093035 P206574 Sult1c1 ProximalPromoter P206574 ProximalPromoter Unique Tile chr17:53455499-53456553 (-) NM_018751 - 61 53455560 20888 Sult1c1 (PST)G|P-SULT|Stp2|Sult1a2|mOLFST sulfotransferase family, cytosolic, 1C, member 1 MGI:102928 Mm.10108 17 17 C|17 34.0 cM 2 actcagaaattcacctgcctctg tgttgaccgttgatgacttcact 1 9 15 1.1.1.1.15.9 BCBC-5A-0 14093054 P201015 1700123O20Rik ProximalPromoter P201015 ProximalPromoter Unique Tile chr14:53639120-53640150 (+) NM_021437 + 270 53640420 58248 1700123O20Rik MNCb-2990 RIKEN cDNA 1700123O20 gene MGI:1920893 Mm.197509 14 14 C2 C14orf119 55017 NM_023190;NM_019567; - 986 53641136 56215 Acin1 0 tgcttctgatgacaaggaaaaca ttatagggaatcgagcagcagtc 1 9 16 1.1.1.1.16.9 BCBC-5A-0 14093073 P207788 Snrpd3 ProximalPromoter P207788 ProximalPromoter Unique Tile chr10:74960688-74961711 (+) NM_026095 + 46 74961757 67332 Snrpd3 1700043E15Rik|2310009E13Rik|AW046420|SMD3 small nuclear ribonucleoprotein D3 MGI:1914582 Mm.392843; Mm.45151; Mm.392843; Mm.45151; Mm.392843; Mm.45151; Mm.392843; Mm.45151; Mm.392843; Mm.45151; Mm.392843; Mm.45151 10 10 C1 SNRPD3 6634 NM_198860 - 42335 75004046 192734 AI646023 0 cctaagtggaggacaggagatga tcctttaagcctacttgcccttc 1 9 17 1.1.1.1.17.9 BCBC-5A-0 14093092 P001367 Blank P001367 Buffer Control Negative Blank 1 9 18 1.1.1.1.18.9 BCBC-5A-0 14093111 P208036 4930547C10Rik ProximalPromoter P208036 ProximalPromoter Unique Tile chr4:52627070-52628061 (+) NM_026652 + 10688 52617373 68274 4930547C10Rik - RIKEN cDNA 4930547C10 gene MGI:1915524 Mm.85045 4 4 B2 0 tctaagtagggctggtggtgtgt tggaatgcagtctttcttgatga 1 9 19 1.1.1.1.19.9 BCBC-5A-0 14092770 P100612 Ube2h ProximalPromoter P100612 ProximalPromoter Unique Tile chr6:30254960-30256003 (-) NM_009459 - 605 30254355 22214 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|N28148|Ubc8 ubiquitin-conjugating enzyme E2H MGI:104632 Mm.332967; Mm.391754; Mm.391800; Mm.332967; Mm.391754; Mm.391800; Mm.332967; Mm.391754; Mm.391800; Mm.332967; Mm.391754; Mm.391800; Mm.332967; Mm.391754; Mm.391800; Mm.332967; Mm.391754; Mm.391800; Mm.332967; Mm.391754; Mm.391800; Mm.332967; Mm.391754; Mm.391800; Mm.332967; Mm.391754; Mm.391800; Mm.332967; Mm.391754; Mm.391800 6 6 A3.3|6 6.5 cM UBE2H 7328 2 tctaggaaagctggtaggggc acagtaaggcttccccagagc 1 10 1 1.1.1.1.1.10 BCBC-5A-0 14092789 P101362 Pkd2l2 ProximalPromoter P101362 ProximalPromoter Unique Tile chr18:34532938-34533854 (+) NM_016927 + 369 34534223 53871 Pkd2l2 TRPP5 polycystic kidney disease 2-like 2 MGI:1858231 Mm.226899 18 18 C PKD2L2 27039 NM_007874 - 34808 34498130 13476 Reep5 0 agcatgctgacagaagaaggc agggtccggatttagaggaca 1 10 2 1.1.1.1.2.10 BCBC-5A-0 14092808 P102213 Col9a1 ProximalPromoter P102213 ProximalPromoter Unique Tile chr1:24130919-24131961 (+) NM_007740 + 13 24131974 12839 Col9a1 Col9a-1 procollagen, type IX, alpha 1 MGI:88465 Mm.154662 1 1 A5|1 15.0 cM COL9A1 1297 0 ctccgacatttgtatcctccaag gcatgcaataaccctttaagctg 1 10 3 1.1.1.1.3.10 BCBC-5A-0 14092827 P103335 Exoc7 ProximalPromoter P103335 ProximalPromoter Unique Tile chr11:116122704-116123741 (-) NM_016857 - 59 116122763 53413 Exoc7 70kDa|Exo70|mKIAA1067|sec70 exocyst complex component 7 MGI:1859270 Mm.22530 11 11 E2 EXOC7 23265 NM_010254 + 25633 116097071 14428 Galr2 0 cctcagtcagcgcttttatccta ctgcttcagtttgtcctcgatct 1 10 4 1.1.1.1.4.10 BCBC-5A-0 14092846 P104085 C8a ProximalPromoter P104085 ProximalPromoter Unique Tile chr4:104374667-104375753 (-) NM_146148 - 352 104374315 230558 C8a MGC29381 complement component 8, alpha polypeptide MGI:2668347 Mm.197638 4 4 C6 C8A 731 0 tctgttccccatgaaggaatcta aggcataaggctcatttggtaca 1 10 5 1.1.1.1.5.10 BCBC-5A-0 14092865 P107007 DistalPromoter P107007 DistalPromoter No Hits Tile 1 cattttgtgcacagctttcactg agcaaccccctctgtgtcactat 1 10 6 1.1.1.1.6.10 BCBC-5A-0 14092884 P105183 Ltbp1 DistalPromoter P105183 DistalPromoter Unique Tile chr17:74907444-74909404 (+) NM_019919;NM_206958; + 1184 74910588 268977 Ltbp1 9430031G15Rik|9830146M04|LTBP-1S|Ltbp-1|Tgfb latent transforming growth factor beta binding protein 1 MGI:109151 Mm.269747 17 17 E3 LTBP1 4052 0 ggatggggtgaacattcattttt aatactggtgagcgtttgctctg 1 10 7 1.1.1.1.7.10 BCBC-5A-0 14092903 P105549 Cttnbp2nl DistalPromoter P105549 DistalPromoter Unique Tile chr3:105168343-105170513 (-) NM_030249 - 12628 105180971 80281 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|MGC7720|mKIAA1433 CTTNBP2 N-terminal like MGI:1933137 Mm.200327 3 3 F2.2 CTTNBP2NL 55917 0 caccagcacacttggctaaaaac cccacagtttacacccagacact 1 10 8 1.1.1.1.8.10 BCBC-5A-0 14092922 P000972 Blank P000972 Buffer Control Negative Blank 1 10 9 1.1.1.1.9.10 BCBC-5A-0 14092941 P207021 4631427C17Rik ProximalPromoter P207021 ProximalPromoter Unique Tile chr6:29717098-29718184 (+) NM_021414 + 358 29718542 74340 4631427C17Rik AI227036|KIAA0828|mKIAA0828 RIKEN cDNA 4631427C17 gene MGI:1921590 Mm.210899 6 6 A3.3 KIAA0828 23382 NM_176996 + 31111 29685987 319757 Smo 2 tgatgttgttatatgccccttcc tccggaaagtagtttttgatgga 1 10 10 1.1.1.1.10.10 BCBC-5A-0 14092960 P201548 Tmem16d ProximalPromoter P201548 ProximalPromoter Unique Tile chr10:88687477-88688524 (-) NM_178773 - 112 88687589 320091 Tmem16d A330096O15Rik transmembrane protein 16D (eight membrane-spanning domains) MGI:2443344 Mm.236464; Mm.417681; Mm.236464; Mm.417681; Mm.236464; Mm.417681; Mm.236464; Mm.417681; Mm.236464; Mm.417681; Mm.236464; Mm.417681; Mm.236464; Mm.417681 10 10 C1 TMEM16D 121601 0 gtttccttctgacctcgcactaa caccacagtctcagagcatcact 1 10 11 1.1.1.1.11.10 BCBC-5A-0 14092979 P204338 Slc26a2 ProximalPromoter P204338 ProximalPromoter Unique Tile chr18:61337079-61338000 (-) NM_007885 - 228 61336851 13521 Slc26a2 Dtd|ST-OB solute carrier family 26 (sulfate transporter), member 2 MGI:892977 Mm.24803 18 18 D3 SLC26A2 1836 NM_146086 + 7867 61345867 225600 Pde6a 0 tcactcattgcttacaggactgc attggctgttctggactacaagc 1 10 12 1.1.1.1.12.10 BCBC-5A-0 14092998 P204512 Hcls1 ProximalPromoter P204512 ProximalPromoter Unique Tile chr16:36852994-36854088 (+) NM_008225 + 163 36854251 15163 Hcls1 AW213261|HS1 hematopoietic cell specific Lyn substrate 1 MGI:104568 Mm.4091 16 16 B HCLS1 3059 NM_001037321 - 44287 36898375 207215 Fbxo40 0 tctatggttctgtgcattgctgt tttttcaggtcacgggaaagtta 1 10 13 1.1.1.1.13.10 BCBC-5A-0 14093017 P205452 Grb7 ProximalPromoter P205452 ProximalPromoter Unique Tile chr11:98261971-98262914 (+) NM_010346 + 66 98262980 14786 Grb7 KIAA4028|MGC78181|mKIAA4028 growth factor receptor bound protein 7 MGI:102683 Mm.276702 11 11 D|11 57.0 cM GRB7 2886 NM_025559 - 6893 98255078 103742 1810046J19Rik 0 cttaaaggtcagtctccccgact gtttggaggctgtttgttaaacg 1 10 14 1.1.1.1.14.10 BCBC-5A-0 14093036 P206598 Syt10 ProximalPromoter P206598 ProximalPromoter Unique Tile chr15:89669838-89670781 (-) NM_018803 - 302 89669536 54526 Syt10 - synaptotagmin X MGI:1859546 Mm.261601 15 15 F1 SYT10 341359 0 ggagtacctccaggggttagaga cccgtcacactcttttcatttct 1 10 15 1.1.1.1.15.10 BCBC-5A-0 14093055 P201040 Ntn2l ProximalPromoter P201040 ProximalPromoter Unique Tile chr17:23937368-23938462 (-) NM_010947 - 381 23936987 18209 Ntn2l Ntn3 netrin 2-like (chicken) MGI:1341188 Mm.259542 17 17 A3.3 NTN2L 4917 NM_173186 - 4253 23933115 224617 Tbc1d24 2 actctagcatgggcttgatgttc gaagcttgaagtcttggatgctc 1 10 16 1.1.1.1.16.10 BCBC-5A-0 14093074 P207812 Srpr ProximalPromoter P207812 ProximalPromoter Unique Tile chr9:34959771-34960766 (+) NM_026130 + 107 34960873 67398 Srpr 1300011P19Rik signal recognition particle receptor ('docking protein') MGI:1914648 Mm.284688 9 9 A5.3 SRPR 6734 NM_172291 - 170 34960596 235169 Foxred1 0 catatttctttccaggcaggatg gactcaagcctgaccaatagcac 1 10 17 1.1.1.1.17.10 BCBC-5A-0 14093093 P210805 Gimap4 ProximalPromoter P210805 ProximalPromoter Unique Tile chr6:48612294-48614055 (+) NM_174990;NM_175048; + 108 48614163 107526 Gimap4 AU019574|E430007K16Rik|IMAP4|Ian1|MGC11734|mIAN1 GTPase, IMAP family member 4 MGI:1349656 Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917; Mm.333048; Mm.395917 6 6 B2.3 GIMAP4 55303 NM_174960 + 6550 48605744 317758 Gimap9 1 gaaaggagactgtcccaagttga ttctgcagtcctcttgttctgtg 1 10 18 1.1.1.1.18.10 BCBC-5A-0 14093112 P208060 Sycn ProximalPromoter P208060 ProximalPromoter Unique Tile chr7:28248423-28249512 (+) NM_026716 + 132 28249644 68416 Sycn 0910001K16Rik|1810038B08Rik|SYL syncollin MGI:1915666 Mm.25210 7 7 A3 SYCN 342898 NM_177396 + 16828 28231595 338374 Il28 0 aagctcatctcttcgtccatttg ctgagcagtgtggaaaacatcac 1 10 19 1.1.1.1.19.10 BCBC-5A-0 14092771 P100636 Dnajc2 ProximalPromoter P100636 ProximalPromoter Unique Tile chr5:21297100-21298041 (-) NM_009584 - 84 21297016 22791 Dnajc2 AU020218|MIDA1|Zrf1|Zrf2 DnaJ (Hsp40) homolog, subfamily C, member 2 MGI:99470 Mm.266312 5 5 A3|5 12.0 cM NM_011188 + 6 21297106 19181 Psmc2 1 acaaatgccaataaacggacg tgactctaaaccgaccggaga 1 11 1 1.1.1.1.1.11 BCBC-5A-0 14092790 P101386 Azin1 ProximalPromoter P101386 ProximalPromoter Unique Tile chr15:38446645-38447627 (-) NM_018745 - 456 38446189 54375 Azin1 1700085L02Rik|AI414949|Oazi|Oazin antizyme inhibitor 1 MGI:1859169 Mm.250214 15 15 C AZIN1 51582 0 agcctcctgggatctgtcatt aatcccagcactcctagcaca 1 11 2 1.1.1.1.2.11 BCBC-5A-0 14092809 P102519 Ppox ProximalPromoter P102519 ProximalPromoter Unique Tile chr1:173117752-173118674 (-) NM_008911 - 63 173117815 19044 Ppox Ppo protoporphyrinogen oxidase MGI:104968 Mm.266888; Mm.391664; Mm.266888; Mm.391664; Mm.266888; Mm.391664; Mm.266888; Mm.391664; Mm.266888; Mm.391664; Mm.266888; Mm.391664; Mm.266888; Mm.391664; Mm.266888; Mm.391664; Mm.266888; Mm.391664 1 - PPOX 5498 NM_013919 - 5930 173124604 30941 Usp21 0 ccagaacctctgcaatctcactt ccagaattctacagcactcggtt 1 11 3 1.1.1.1.3.11 BCBC-5A-0 14092828 P103359 Tmod3 ProximalPromoter P103359 ProximalPromoter Unique Tile chr9:75345895-75346931 (-) NM_016963 - 329 75345566 50875 Tmod3 U-Tmod|UTMOD tropomodulin 3 MGI:1355315 Mm.38445 9 9 D|9 38.0 cM TMOD3 29766 NM_001038710;NM_016711; - 36629 75383560 50876 Tmod2 0 gtagaacacaaagttggaacggg ctaatgggagagcgtgataatgg 1 11 4 1.1.1.1.4.11 BCBC-5A-0 14092847 P104109 Prkag3 ProximalPromoter P104109 ProximalPromoter Unique Tile chr1:74682347-74683367 (-) NM_153745;NM_153744; - 278 74682069 241113 Prkag3 AMKg3L|AMKg3S|AMPKg3|AMPKg3L|AMPKg3S protein kinase, AMP-activated, gamma 3 non-catatlytic subunit MGI:1891343 Mm.166501 1 1 C3 PRKAG3 53632 NM_024264 + 17214 74665133 104086 Cyp27a1 0 cagtgatcttcctgcttccactt tcgaggatagagaagggtaaggg 1 11 5 1.1.1.1.5.11 BCBC-5A-0 14092866 P107029 Ubr1 DistalPromoter P107029 DistalPromoter Unique Tile chr2:120663266-120665089 (-) NM_009461 - 1110 120662156 22222 Ubr1 AI504731 ubiquitin protein ligase E3 component n-recognin 1 MGI:1277977 Mm.389330 2 2 E5|2 67.4 cM UBR1 197131 NM_175285 + 3413 120668502 96957 Tmem62 0 ggctctgctcaaggttcaatttt gctgtttatgcctggtgtaatgg 1 11 6 1.1.1.1.6.11 BCBC-5A-0 14092885 P105117 Tmem45a DistalPromoter P105117 DistalPromoter Unique Tile chr16:56811847-56813917 (-) NM_019631 - 730 56811117 56277 Tmem45a C630002M10Rik|M32486|p19.5 transmembrane protein 45a MGI:1913122 Mm.262328 16 16 C1.1 TMEM45A 55076 0 caggaaatccaggacacaatgag tcctgtggtgagctttcagaatc 1 11 7 1.1.1.1.7.11 BCBC-5A-0 14092904 P000781 Blank P000781 Buffer Control Negative Blank 1 11 8 1.1.1.1.8.11 BCBC-5A-0 14092923 P001068 Blank P001068 Buffer Control Negative Blank 1 11 9 1.1.1.1.9.11 BCBC-5A-0 14092942 P207046 Fbxo16 ProximalPromoter P207046 ProximalPromoter Unique Tile chr14:64216685-64217689 (-) NM_015795 + 3121 64220810 50759 Fbxo16 4932435C24Rik|Fbx16|MGC144594 F-box protein 16 MGI:1354706 Mm.65308 14 14 D1 FBXO16 157574 NM_021458 - 9145 64207540 14365 Fzd3 2 ctctctgtacacctatgggccag aggtgatagtgacgtcttgagcg 1 11 10 1.1.1.1.10.11 BCBC-5A-0 14092961 P202057 Tbc1d7 ProximalPromoter P202057 ProximalPromoter Unique Tile chr13:43182279-43183373 (-) NM_025935 - 52 43182331 67046 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 MGI:1914296 Mm.269213 13 13 A4 TBC1D7 51256 NM_198419;NM_001005740;NM_001005748; + 48469 43133810 218194 Phactr1 2 aatcagtagtccgtcccagacag acctcgagtagagcaaacacacc 1 11 11 1.1.1.1.11.11 BCBC-5A-0 14092980 P204362 Epc1 ProximalPromoter P204362 ProximalPromoter Unique Tile chr18:6515962-6516924 (-) NM_007935;NM_027497; - 123 6516085 13831 Epc1 2400007E14Rik|5730566F07Rik|A930032N02Rik enhancer of polycomb homolog 1 (Drosophila) MGI:1278322 Mm.312133 18 18 A1 EPC1 80314 2 tctgccaagttaggtgaaagacc acggatcttcaaacatcctgaaa 1 11 12 1.1.1.1.12.11 BCBC-5A-0 14092999 P204536 Hsp90ab1 ProximalPromoter P204536 ProximalPromoter Unique Tile chr17:45036767-45037831 (-) NM_008302 - 69 45036836 15516 Hsp90ab1 90kDa|AL022974|C81438|Hsp84|Hsp84-1|Hsp90|Hspcb|MGC115780 heat shock protein 90kDa alpha (cytosolic), class B member 1 MGI:96247 Mm.2180 17 17 B3|17 15.0 cM HSP90AB1 3326 NM_028662 + 9035 45027732 73836 Slc35b2 2 gttcactagaaggtgtccgcagt agtagtacagagcagggtggtgg 1 11 13 1.1.1.1.13.11 BCBC-5A-0 14093018 P205476 Hck ProximalPromoter P205476 ProximalPromoter Unique Tile chr2:152798891-152799840 (+) NM_010407 + 108 152799948 15162 Hck AI849071|Bmk|Hck-1|MGC18625 hemopoietic cell kinase MGI:96052 Mm.715 2 2 H1|2 86.0 cM HCK 3055 NM_145536 + 41496 152757395 228788 BC020535 0 tattcagcccagaataaggcaaa ctcctgctctaaattcacctcca 1 11 14 1.1.1.1.14.11 BCBC-5A-0 14093037 P206531 Hpxn ProximalPromoter P206531 ProximalPromoter Unique Tile chr7:105473869-105474825 (-) NM_017371 - 48 105473917 15458 Hpxn hx hemopexin MGI:105112 Mm.3485 7 7 F1 HPX 3263 NM_009685 - 18513 105455356 11785 Apbb1 0 cggattttggtagggtgatgtaa ccagcaacaccaggatatttagc 1 11 15 1.1.1.1.15.11 BCBC-5A-0 14093056 P201064 Plin ProximalPromoter P201064 ProximalPromoter Unique Tile chr7:79605532-79606529 (-) NM_175640 - 152 79605684 103968 Plin 6030432J05Rik|perilipin A|perilipin B perilipin MGI:1890505 Mm.254917 7 7 D2 PLIN 5346 NM_011068 - 9982 79616511 18631 Pex11a 2 acttctctgggctctgacaaatg cctgactcttcctctctgctcac 1 11 16 1.1.1.1.16.11 BCBC-5A-0 14093075 P207837 1700028P14Rik ProximalPromoter P207837 ProximalPromoter Unique Tile chr19:23720162-23721222 (-) NM_026188 - 253 23719909 67483 1700028P14Rik AV209940 RIKEN cDNA 1700028P14 gene MGI:1914733 Mm.391173 19 19 B C9orf135 138255 0 cgaaagggaaaggctgaaatagt tacggagaaatagtactgcccca 1 11 17 1.1.1.1.17.11 BCBC-5A-0 14093094 P210829 Aard ProximalPromoter P210829 ProximalPromoter Unique Tile chr15:51868918-51869917 (+) NM_175503 + 263 51870180 239435 Aard A5D3|AV328152|MGC107188 alanine and arginine rich domain containing protein MGI:2181621 Mm.24204 15 15 C LOC441376 441376 NM_009009 - 47282 51821636 19357 Rad21 2 ctgaacttggcgattatacccag ggtttcgacacaaaactttccag 1 11 18 1.1.1.1.18.11 BCBC-5A-0 14093113 P001619 Blank P001619 Buffer Control Negative Blank 1 11 19 1.1.1.1.19.11 BCBC-5A-0 14092772 P100660 Apoa1 ProximalPromoter P100660 ProximalPromoter Unique Tile chr9:45978640-45979554 (+) NM_009692 + 150 45979704 11806 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|MGC102525|Sep-1|Sep-2|Sep2 apolipoprotein A-I MGI:88049 Mm.26743 9 9 A2-A4|9 27.0 cM APOA1 335 NM_023114 - 6722 45986276 11814 Apoc3 0 cttccaagtgcaaaaactggc aaacagagtgggcaaacagga 1 12 1 1.1.1.1.1.12 BCBC-5A-0 14092791 P101410 Brp44l ProximalPromoter P101410 ProximalPromoter Unique Tile chr17:8120549-8121563 (+) NM_018819 + 420 8121983 55951 Brp44l 0610006G08Rik|3830411I18Rik|MGC117549 brain protein 44-like MGI:1915240 Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510 17 17 A1|17 7.8 cM BRP44L 51660 NM_134114 + 27712 8149275 106489 5630401J11Rik 0 tcatattccccagtggcattc agtctccagaagtgtggctgc 1 12 2 1.1.1.1.2.12 BCBC-5A-0 14092810 P102543 Rab11b ProximalPromoter P102543 ProximalPromoter Unique Tile chr17:33367396-33368354 (-) NM_008997 - 216 33367180 19326 Rab11b - RAB11B, member RAS oncogene family MGI:99425 Mm.387587 17 17 B1|17 18.3 cM RAB11B 9230 NM_020581 - 20032 33388386 57875 Angptl4 0 ttccttctaggctcccagttacc attcagcagcctatcaaaagcag 1 12 3 1.1.1.1.3.12 BCBC-5A-0 14092829 P103293 ProximalPromoter P103293 ProximalPromoter No Hits Tile 0 ccagtatggtaactggtgggaaa cttaccttcataggtcccgcttt 1 12 4 1.1.1.1.4.12 BCBC-5A-0 14092848 P104133 Pck1 ProximalPromoter P104133 ProximalPromoter Unique Tile chr2:172795529-172796471 (+) NM_011044 + 444 172796027 18534 Pck1 AI265463|PEPCK|Pck-1 phosphoenolpyruvate carboxykinase 1, cytosolic MGI:97501 Mm.266867 2 2 C1-qter|2 103.0 cM PCK1 5105 0 agtctcatggctcagagctgaat gccatcgcagatgtggatatact 1 12 5 1.1.1.1.5.12 BCBC-5A-0 14092867 P107051 Ywhae DistalPromoter P107051 DistalPromoter Unique Tile chr11:75546148-75548075 (+) NM_009536 + 1047 75549122 22627 Ywhae AU019196 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide MGI:894689 Mm.234700 11 11 B2|11 44.17 cM YWHAE 7531 0 acagaccagttgtgagcaggaag tctgtgaacggacaggaattgtt 1 12 6 1.1.1.1.6.12 BCBC-5A-0 14092886 P105141 Arl2 DistalPromoter P105141 DistalPromoter Unique Tile chr19:6142507-6144318 (-) NM_019722 - 1370 6141137 56327 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 MGI:1928393 Mm.21071 19 19 A ARL2 402 NM_026912 - 14292 6128215 69024 Snx15 0 gccttaggaactcagccgtatgt gtttttgctttttccgagacagg 1 12 7 1.1.1.1.7.12 BCBC-5A-0 14092905 P106161 DistalPromoter P106161 DistalPromoter No Hits Tile 2 aaaaacaaaggaaggaagggagg ctgggatttgaactctggacctt 1 12 8 1.1.1.1.8.12 BCBC-5A-0 14092924 P001164 Blank P001164 Buffer Control Negative Blank 1 12 9 1.1.1.1.9.12 BCBC-5A-0 14092943 P207070 Pias4 ProximalPromoter P207070 ProximalPromoter Unique Tile chr10:80571129-80572138 (-) NM_021501 - 77 80571052 59004 Pias4 PIASY|Pias-gamma|Piasg protein inhibitor of activated STAT 4 MGI:2136940 Mm.34428 10 10 C1 PIAS4 51588 NM_007907 + 7649 80579787 13629 Eef2 2 gagcaggaagcacatacaccttt taaagaaatagcagcacttcccg 1 12 10 1.1.1.1.10.12 BCBC-5A-0 14092962 P202081 BC038925 ProximalPromoter P202081 ProximalPromoter Unique Tile chr5:138422974-138423975 (+) NM_177878 + 126 138424101 330216 BC038925 MGC49416 cDNA sequence BC038925 MGI:2679717 Mm.19719 5 5 G2 LOC255374 255374 NM_178612 + 5617 138417357 66455 2610019P18Rik 2 gtcaatagtggtgtgagctgtgg cccccttaggcttatagtcggta 1 12 11 1.1.1.1.11.12 BCBC-5A-0 14092981 P204296 Csnk ProximalPromoter P204296 ProximalPromoter Unique Tile chr5:88999211-89000188 (+) NM_007786 + 0 89000188 12994 Csnk AW208918|CSN10|Csn3 casein kappa MGI:107461 Mm.296303 5 5 E1|5 45.2 cM CSN3 1448 NM_027128 + 37168 88962043 69592 Odam 0 agacgtgtaatggttcccagaaa gctgcagagaagacccaagataa 1 12 12 1.1.1.1.12.12 BCBC-5A-0 14093000 P204560 Il12rb2 ProximalPromoter P204560 ProximalPromoter Unique Tile chr6:67305870-67306785 (-) NM_008354 - 155 67305715 16162 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 MGI:1270861 Mm.188337 6 6 C1|6 30.1 cM IL12RB2 3595 0 tgtcctttcaactaaccagaggc gcttagtgcggttctgagaaaaa 1 12 13 1.1.1.1.13.12 BCBC-5A-0 14093019 P205501 Hoxb7 ProximalPromoter P205501 ProximalPromoter Unique Tile chr11:96101759-96102800 (+) NM_010460 + 65 96102735 15415 Hoxb7 AI325018|Hox-2.3 homeo box B7 MGI:96188 Mm.390366 11 11 D|11 56.02 cM HOXB7 3217 NM_010461 + 3765 96097994 15416 Hoxb8 1 tctctttgtttccgtgtgtgtgt tgtagtcggggacgttttagtgt 1 12 14 1.1.1.1.14.12 BCBC-5A-0 14093038 P206556 Rdh7 ProximalPromoter P206556 ProximalPromoter Unique Tile chr10:127291613-127292626 (-) NM_017473 - 5 127291608 54150 Rdh7 AI194929|CRAD2 retinol dehydrogenase 7 MGI:1860517 Mm.6696 10 10 D3 NM_027301 + 8857 127301483 70061 Sdro 0 cctgtggagttcttaacccctct gcctctgcttacacaggaaggta 1 12 15 1.1.1.1.15.12 BCBC-5A-0 14093057 P200500 Scpep1 ProximalPromoter P200500 ProximalPromoter Unique Tile chr11:88771388-88772469 (-) NM_029023 - 88 88771476 74617 Scpep1 2410018F01Rik|4833411K15Rik|AI957256|Risc serine carboxypeptidase 1 MGI:1921867 Mm.34126 11 11 C SCPEP1 59342 NM_001025564 - 10538 88783007 217066 LOC217066 0 gagttctgaatctgtacgccacc gctgaagcccagtaagaacgata 1 12 16 1.1.1.1.16.12 BCBC-5A-0 14093076 P207861 Mrpl49 ProximalPromoter P207861 ProximalPromoter Unique Tile chr19:6057561-6058557 (-) NM_026246 - 180 6057741 18120 Mrpl49 4833419D18Rik|Nof1 mitochondrial ribosomal protein L49 MGI:108180 Mm.181290 19 19 A|19 3.0 cM MRPL49 740 NM_007990 + 387 6057948 14109 Fau 0 ctgctacttccagagtggtcagg catagcaaatctaaggcctcgtg 1 12 17 1.1.1.1.17.12 BCBC-5A-0 14093095 P001349 Blank P001349 Buffer Control Negative Blank 1 12 18 1.1.1.1.18.12 BCBC-5A-0 14093114 P001715 Blank P001715 Buffer Control Negative Blank 1 12 19 1.1.1.1.19.12 BCBC-5A-0 14092773 P100594 Tpp2 ProximalPromoter P100594 ProximalPromoter Unique Tile chr1:43877657-43878624 (+) NM_009418 + 11 43878613 22019 Tpp2 TppII tripeptidyl peptidase II MGI:102724 Mm.234139 1 1 C1.1|1 27.0 cM TPP2 7174 0 gattactctgggcgccttctt tggaggacagacgaggaagag 1 13 1 1.1.1.1.1.13 BCBC-5A-0 14092792 P101434 Omg ProximalPromoter P101434 ProximalPromoter Unique Tile chr11:79320319-79321413 (-) NM_019409 - 105 79320214 18377 Omg - oligodendrocyte myelin glycoprotein MGI:106586 Mm.93335 11 11 B5|11 46.07 cM OMG 4974 NM_146023 - 18476 79339889 216984 Evi2b 0 gcttcaattcctggccttctt gtgcatacgcaacaaaatgga 1 13 2 1.1.1.1.2.13 BCBC-5A-0 14092811 P102567 Lnx2 ProximalPromoter P102567 ProximalPromoter Unique Tile chr5:147386590-147387541 (+) NM_080795 - 285 147386875 140887 Lnx2 9630046H24|AW209022 ligand of numb-protein X 2 MGI:2155959 Mm.272203 5 5 G2 LNX2 222484 NM_009087;NM_181730; + 348 147387889 20018 Rpo1-3 1 ccaaacctccatgtcttgaaaag gcagagatgactctcctgacgat 1 13 3 1.1.1.1.3.13 BCBC-5A-0 14092830 P103317 Ccnc ProximalPromoter P103317 ProximalPromoter Unique Tile chr4:21817225-21818228 (+) NM_016746 + 332 21818560 51813 Ccnc AI451004|AU020987|CG1C cyclin C MGI:1858199 Mm.278584 4 4 A3 CCNC 892 NM_152825 + 48904 21867132 77593 Usp45 0 agagctcgcttgagtcatgttct ccctagggctgaaaggagaaata 1 13 4 1.1.1.1.4.13 BCBC-5A-0 14092849 P104343 Kcnk1 DistalPromoter P104343 DistalPromoter Unique Tile chr8:128878119-128880104 (+) NM_008430 + 1155 128881259 16525 Kcnk1 AI788889|TWIK-1 potassium channel, subfamily K, member 1 MGI:109322 Mm.10800 8 8 E2 KCNK1 3775 0 gggtcttgaaaatggaaatcagg atcaatgtctccaatgaactccg 1 13 5 1.1.1.1.5.13 BCBC-5A-0 14092868 P107072 Apoc2 DistalPromoter P107072 DistalPromoter Unique Tile chr7:18832864-18835022 (-) NM_009695 - 3599 18836463 11813 Apoc2 MGC117889 apolipoprotein C-II MGI:88054 Mm.28394 7 7 A3|7 4.0 cM APOC2 344 NM_007385 - 4916 18839938 11425 Apoc4 2 ccagcccaggttagtcttgaact acagggtttctctgtagccttgg 1 13 6 1.1.1.1.6.13 BCBC-5A-0 14092887 P105165 Tmem59 DistalPromoter P105165 DistalPromoter Unique Tile chr4:106673251-106675314 (+) NM_029565 + 1309 106676623 56374 Tmem59 1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18 transmembrane protein 59 MGI:1929278 Mm.291192 4 4 51.8 cM TMEM59 9528 NM_025617 - 922 106676236 66526 2210012G02Rik 0 gcacccaggaaaagaacatctct ccaattctggctttagggtatgg 1 13 7 1.1.1.1.7.13 BCBC-5A-0 14092906 P106182 DistalPromoter P106182 DistalPromoter Unique Tile chr12:35023679-35025697 (-) 0 ggttgctgtctgccaaacaatag aagacaacaggtctttgggaagc 1 13 8 1.1.1.1.8.13 BCBC-5A-0 14092925 P000888 Blank P000888 Buffer Control Negative Blank 1 13 9 1.1.1.1.9.13 BCBC-5A-0 14092944 P207094 Stard3 ProximalPromoter P207094 ProximalPromoter Unique Tile chr11:98173354-98174271 (+) NM_021547 + 202 98174473 59045 Stard3 Mln64|es64 START domain containing 3 MGI:1929618 Mm.265546 11 11 D STARD3 10948 NM_144828 + 8275 98165079 19049 Ppp1r1b 0 attcttctatttacccggtggga atacaggcctgacactgtggagt 1 13 10 1.1.1.1.10.13 BCBC-5A-0 14092963 P202107 Msra ProximalPromoter P202107 ProximalPromoter Unique Tile chr14:63395157-63396079 (-) NM_026322 - 62 63395095 110265 Msra 2310045J23Rik|6530413P12Rik|MGC101976|MSR-A methionine sulfoxide reductase A MGI:106916 Mm.26713 14 14 D1|14 25.5 cM MSRA 4482 0 ttttcttgcatgacccttgttct gggaaatcaatgtgtgtgcataa 1 13 11 1.1.1.1.11.13 BCBC-5A-0 14092982 P204320 Twist2 ProximalPromoter P204320 ProximalPromoter Unique Tile chr1:93630786-93631843 (+) NM_007855 + 39 93631882 13345 Twist2 Dermo1 twist homolog 2 (Drosophila) MGI:104685 Mm.9474 1 1 D TWIST2 117581 0 aataggttcaaaggcaaggaagc gctaaatagctgtcaggagcgag 1 13 12 1.1.1.1.12.13 BCBC-5A-0 14093001 P205257 Cd22 ProximalPromoter P205257 ProximalPromoter Unique Tile chr7:30589109-30590184 (-) NM_009845 - 82 30589027 12483 Cd22 A530093D23|Lyb-8|Lyb8 CD22 antigen MGI:88322 Mm.260994 7 7 B1|7 9.0 cM CD22 933 NM_194057 - 18879 30570230 233081 Ffar1 0 ccacaggttgtcctctgatctct agaccagcagatatggtgtggat 1 13 13 1.1.1.1.13.13 BCBC-5A-0 14093020 P205525 Ikbkg ProximalPromoter P205525 ProximalPromoter Unique Tile chrX:70681222-70682180 (+) NM_178590;NM_010547; + 243 70682423 16151 Ikbkg 1110037D23Rik|AI848108|AI851264|AW124339|IKK[g]|NEMO inhibitor of kappaB kinase gamma MGI:1338074 Mm.12967 X X A7.3 IKBKG 8517 NM_008062 - 299 70681881 14381 G6pdx 2 aaatctggttacggcatcacact tcgaactcagagatctacctgcc 1 13 14 1.1.1.1.14.13 BCBC-5A-0 14093039 P206580 Scap2 ProximalPromoter P206580 ProximalPromoter Unique Tile chr6:51941913-51942998 (-) NM_018773 - 219 51942132 54353 Scap2 2610021A10Rik|AA960083|BB137539|RA70|SKAP-HOM|Saps|mSKAP55R src family associated phosphoprotein 2 MGI:1889206 Mm.221479; Mm.392558; Mm.221479; Mm.392558; Mm.221479; Mm.392558; Mm.221479; Mm.392558; Mm.221479; Mm.392558; Mm.221479; Mm.392558; Mm.221479; Mm.392558; Mm.221479; Mm.392558; Mm.221479; Mm.392558 6 6 B3 SCAP2 8935 0 aaaggttgatggcacttgaatgt tttacctgccaacaggttcctaa 1 13 15 1.1.1.1.15.13 BCBC-5A-0 14093058 P200525 4933434M16Rik ProximalPromoter P200525 ProximalPromoter Unique Tile chr11:112640397-112641441 (+) NM_027720 + 173 112641268 71203 4933434M16Rik 4930468F18Rik RIKEN cDNA 4933434M16 gene MGI:1918453 Mm.158615 11 11 E2 NM_011448 + 42026 112598371 20682 Sox9 0 agacagcccatctgtacacacaa acagcacagcacaattgtaagga 1 13 16 1.1.1.1.16.13 BCBC-5A-0 14093077 P207794 Herc4 ProximalPromoter P207794 ProximalPromoter Unique Tile chr10:62638385-62639444 (+) NM_026101 + 103 62639341 67345 Herc4 1700056O17Rik|4921531D01Rik|mKIAA1593 hect domain and RLD 4 MGI:1914595 Mm.234437 10 10 B4 HERC4 26091 2 cttgttccaacaaattgtcctcc cccaagaccttcctccttcag 1 13 17 1.1.1.1.17.13 BCBC-5A-0 14093096 P001373 Blank P001373 Buffer Control Negative Blank 1 13 18 1.1.1.1.18.13 BCBC-5A-0 14093115 P001811 Blank P001811 Buffer Control Negative Blank 1 13 19 1.1.1.1.19.13 BCBC-5A-0 14092774 P100618 Vamp2 ProximalPromoter P100618 ProximalPromoter Unique Tile chr11:68903587-68904508 (+) NM_009497 + 214 68904722 22318 Vamp2 Syb-2|Syb2 vesicle-associated membrane protein 2 MGI:1313277 Mm.28643 11 11 B3 VAMP2 6844 NM_011065 + 10635 68915143 18626 Per1 0 cctaaaatgcctccttcaccc cccccaatacatcctccctta 1 14 1 1.1.1.1.1.14 BCBC-5A-0 14092793 P101740 Slc30a7 ProximalPromoter P101740 ProximalPromoter Unique Tile chr3:115999692-116000619 (-) NM_023214 - 309 115999383 66500 Slc30a7 1810059J10Rik|ZnT-7|ZnT7|Zntl2 solute carrier family 30 (zinc transporter), member 7 MGI:1913750 Mm.37586 3 3 G2 SLC30A7 148867 NM_021388 + 47 115999739 58193 Extl2 0 caagaacgagggcaaaacaag ctaaaggacctcaaatccccg 1 14 2 1.1.1.1.2.14 BCBC-5A-0 14092812 P102591 Serpina1a ProximalPromoter P102591 ProximalPromoter Unique Tile chr12:104259116-104260175 (-) NM_009243 - 10 104259106 20700 Serpina1a Aat-2|Aat2|Dom1|MGC117839|PI1|Spi1-1|Spi1-3 serine (or cysteine) peptidase inhibitor, clade A, member 1a MGI:891971 Mm.312593 12 12 E|12 51.0 cM NM_009245 - 4418 104264593 20702 Serpina1c 0 gccattctcttctagagcaccaa acagaaagagatgcaaggtcagg 1 14 3 1.1.1.1.3.14 BCBC-5A-0 14092831 P103341 Tomm40 ProximalPromoter P103341 ProximalPromoter Unique Tile chr7:18874121-18875159 (-) NM_016871 - 182 18873939 53333 Tomm40 AW539759|MGC118268|Mom35|Tom40 translocase of outer mitochondrial membrane 40 homolog (yeast) MGI:1858259 Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870; Mm.214803; Mm.416870 7 7 A3 TOMM40 10452 NM_009696 - 16567 18857554 11816 Apoe 0 gaagtgagtggggtacaatgagg agtgcagcttcctctaccttcct 1 14 4 1.1.1.1.4.14 BCBC-5A-0 14092850 P104367 Mmp2 DistalPromoter P104367 DistalPromoter Unique Tile chr8:95713212-95715296 (+) NM_008610 + 1159 95716455 17390 Mmp2 Clg4a|GelA|MMP-2 matrix metallopeptidase 2 MGI:97009 Mm.29564 8 8 C5|8 44.0 cM MMP2 4313 NM_173014 + 29181 95744477 270084 Aytl1 0 ttttcaggccgatggtgttacta tgtggatagtcagagagccaagc 1 14 5 1.1.1.1.5.14 BCBC-5A-0 14092869 P107015 Klhdc3 DistalPromoter P107015 DistalPromoter Unique Tile chr17:46148868-46150790 (-) NM_027910 - 4773 46144095 71765 Klhdc3 1300011D16Rik|Peas kelch domain containing 3 MGI:2651568 Mm.254784 17 17 C|17 24.31 cM KLHDC3 116138 NM_010787 + 4528 46144340 17256 Mea1 0 ccagtgctgtgtcctctttgact gtcccacaatcacctgtgaagac 1 14 6 1.1.1.1.6.14 BCBC-5A-0 14092888 P105189 Sec11l1 DistalPromoter P105189 DistalPromoter Unique Tile chr7:80822089-80823912 (-) NM_019951 - 1026 80821063 56529 Sec11l1 1810012E07Rik|18kDa|Sid2895p|Spc18|sid2895 Sec11-like 1 (S. cerevisiae) MGI:1929464 Mm.391831; Mm.43760; Mm.391831; Mm.43760; Mm.391831; Mm.43760; Mm.391831; Mm.43760; Mm.391831; Mm.43760; Mm.391831; Mm.43760; Mm.391831; Mm.43760 7 7 D3 SEC11L1 23478 NM_178707 + 43284 80867196 233410 Zfp592 0 ctgtggcatgtacaagctcctct cagcttccgtgacagtaccagat 1 14 7 1.1.1.1.7.14 BCBC-5A-0 14092907 P106203 Cyp4f18 DistalPromoter P106203 DistalPromoter Unique Tile chr8:74939516-74941439 (-) NM_024444 - 910 74938606 72054 Cyp4f18 1810054N16Rik|Cypf18 cytochrome P450, family 4, subfamily f, polypeptide 18 MGI:1919304 Mm.160020 8 8 C1 CYP4F3 4051 NM_146539;NM_207555; + 45231 74986670 258532; 404315 Olfr373; Olfr372 0 ggtctgacacccttttctggagt ccaaacacttgagaggctgagaa 1 14 8 1.1.1.1.8.14 BCBC-5A-0 14092926 P000984 Blank P000984 Buffer Control Negative Blank 1 14 9 1.1.1.1.9.14 BCBC-5A-0 14092945 P202734 1300018I05Rik ProximalPromoter P202734 ProximalPromoter Unique Tile chr17:29386515-29387464 (+) NM_028791 + 148 29387612 74157 1300018I05Rik AI451264|mKIAA0082 RIKEN cDNA 1300018I05 gene MGI:1921407 Mm.390979 17 17 A3.3 KIAA0082 23070 NM_021419 + 44673 29341842 58230 Rnf8 2 tgtcctatggaacaggaacaggt ataacccttgtctactctcgccc 1 14 10 1.1.1.1.10.14 BCBC-5A-0 14092964 P202131 A030007L17Rik ProximalPromoter P202131 ProximalPromoter Unique Tile chr6:54922355-54923314 (-) NM_026637 - 70 54922425 68252 A030007L17Rik AA673177 RIKEN cDNA A030007L17 gene MGI:1915502 Mm.294708 6 6 B3 C7orf24 79017 NM_172729 - 20366 54901989 107607 Card4 2 gtttccagtcgttctgctcctta aagtacaggaatgtctccccctc 1 14 11 1.1.1.1.11.14 BCBC-5A-0 14092983 P204344 Ednrb ProximalPromoter P204344 ProximalPromoter Unique Tile chr14:102729644-102730696 (-) NM_007904 - 269 102729375 13618 Ednrb AU022549|ET-B|ET>B<|ETb|Sox10m1|s endothelin receptor type B MGI:102720 Mm.229532 14 14 E2.3|14 51.0 cM EDNRB 1910 0 agacagaagccaagaatgacagg tgacttcaaacactcgccttaca 1 14 12 1.1.1.1.12.14 BCBC-5A-0 14093002 P205281 Cldn4 ProximalPromoter P205281 ProximalPromoter Unique Tile chr5:135231734-135232676 (-) NM_009903 - 201 135231533 12740 Cldn4 CEP-R|Cpetr|Cpetr1 claudin 4 MGI:1313314 Mm.7339 5 5 G2|5 75.0 cM CLDN4 1364 NM_024479 + 14714 135217020 79565 Wbscr27 0 ggaagcacaccatctctcttcat aagaaactatcatctcccccagc 1 14 13 1.1.1.1.13.14 BCBC-5A-0 14093021 P205458 Gsta4 ProximalPromoter P205458 ProximalPromoter Unique Tile chr9:77976585-77977486 (+) NM_010357 + 217 77977703 14860 Gsta4 5.7|GST|GST 5.7|mGsta4 glutathione S-transferase, alpha 4 MGI:1309515 Mm.2662 9 9 E1 GSTA4 2941 NM_008181 + 38883 78016369 14857 Gsta1 0 ggagtgtcccttttctttgaggt tgtttacattctctacgggggaa 1 14 14 1.1.1.1.14.14 BCBC-5A-0 14093040 P206604 Chm ProximalPromoter P206604 ProximalPromoter Unique Tile chrX:109302512-109303605 (-) NM_018818 - 53 109302459 12662 Chm Rep-1 choroidermia MGI:892979 Mm.257316; Mm.393010; Mm.257316; Mm.393010; Mm.257316; Mm.393010; Mm.257316; Mm.393010; Mm.257316; Mm.393010; Mm.257316; Mm.393010; Mm.257316; Mm.393010; Mm.257316; Mm.393010; Mm.257316; Mm.393010; Mm.257316; Mm.393010; Mm.257316; Mm.393010 X X E1 CHM 1121 2 tgtggaggtcacagagattgaga aaaaacagtgcattctgggtgtt 1 14 15 1.1.1.1.15.14 BCBC-5A-0 14093059 P200549 Rbmy1a1 ProximalPromoter P200549 ProximalPromoter Duplication Tile chrY:2114590-2115489 (+) NM_011253 + 79 2115568 19657 Rbmy1a1 RBM|Rbm1 RNA binding motif protein, Y chromosome, family 1, member A1 MGI:104732 Mm.4711 Y Y C3 RBMY1A1 5940 1 ggttaacaagccctgagattcct gcaaaggaagtagggatgatgtg 1 14 16 1.1.1.1.16.14 BCBC-5A-0 14093078 P207818 3230401I01Rik ProximalPromoter P207818 ProximalPromoter Unique Tile chr7:121858475-121859495 (-) NM_026140 - 264 121858211 67417 3230401I01Rik AL024049|mKIAA1970 RIKEN cDNA 3230401I01 gene MGI:1914667 Mm.45171 7 7 F2 NM_138589 + 124 121858351 28018 D7Wsu128e 0 gtctgctgaaaataaatccgtgg ggtctccatagaaacctccacct 1 14 17 1.1.1.1.17.14 BCBC-5A-0 14093097 P207885 Tceb2 ProximalPromoter P207885 ProximalPromoter Unique Tile chr17:23556996-23557916 (-) NM_026305 - 265 23556731 67673 Tceb2 0610040H15Rik transcription elongation factor B (SIII), polypeptide 2 MGI:1914923 Mm.153758 17 17 A3.3 TCEB2 6923 NM_027644 - 13862 23571778 71003 4931440B09Rik 1 gtccttgcatcagacgaggtagt catgcatatctgccatgaacaat 1 14 18 1.1.1.1.18.14 BCBC-5A-0 14093116 P001907 Blank P001907 Buffer Control Negative Blank 1 14 19 1.1.1.1.19.14 BCBC-5A-0 14092775 P100642 Akt1 ProximalPromoter P100642 ProximalPromoter Unique Tile chr12:113122624-113123526 (-) NM_009652 - 540 113122084 11651 Akt1 Akt|PKB|PKB/Akt|PKBalpha thymoma viral proto-oncogene 1 MGI:87986 Mm.6645 12 12 F1-F2|12 57.0 cM AKT1 207 NM_013929 + 29905 113092719 30954 Siva 0 gcggaccttactcaccttgtg tatggtgtcccggaattgaag 1 15 1 1.1.1.1.1.15 BCBC-5A-0 14092794 P101764 Ssna1 ProximalPromoter P101764 ProximalPromoter Unique Tile chr2:25094636-25095674 (-) NM_023464 - 218 25094418 68475 Ssna1 1110003H09Rik|1190004J23Rik|AA934184|N14|NA14 Sjogren's syndrome nuclear autoantigen 1 MGI:1915725 Mm.21444 2 2 A3 SSNA1 8636 NM_175300 + 129 25094507 99152 Anapc2 0 ccctggttacaagtatgggca gcctggaatactgtgagcacc 1 15 2 1.1.1.1.2.15 BCBC-5A-0 14092813 P102525 Prkg2 ProximalPromoter P102525 ProximalPromoter Unique Tile chr5:99277663-99278566 (-) NM_008926 - 282 99277381 19092 Prkg2 AW212535|CGKII|MGC130517|Prkgr2 protein kinase, cGMP-dependent, type II MGI:108173 Mm.263002; Mm.394460; Mm.263002; Mm.394460; Mm.263002; Mm.394460; Mm.263002; Mm.394460; Mm.263002; Mm.394460; Mm.263002; Mm.394460; Mm.263002; Mm.394460; Mm.263002; Mm.394460; Mm.263002; Mm.394460 5 5 E3|5 53.0 cM PRKG2 5593 0 tcgtcctctgaggcttaatgaac acagtctgcactttataccccga 1 15 3 1.1.1.1.3.15 BCBC-5A-0 14092832 P103365 Lyzs ProximalPromoter P103365 ProximalPromoter Unique Tile chr10:116686235-116687260 (-) NM_017372 - 139 116686374 17105 Lyzs AI326280|Lys|Lzm|Lzm-s1|Lzp lysozyme MGI:96897 Mm.45436 10 10 D2|10 66.0 cM NM_013590 - 9718 116696978 17110 Lzp-s 0 cataggggatgcacagacataca catagtagccagccattccattc 1 15 4 1.1.1.1.4.15 BCBC-5A-0 14092851 P104391 Notch1 DistalPromoter P104391 DistalPromoter Unique Tile chr2:26327210-26329307 (-) NM_008714 - 1564 26325646 18128 Notch1 9930111A19Rik|Mis6|Tan1|lin-12 Notch gene homolog 1 (Drosophila) MGI:97363 Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411; Mm.290610; Mm.392411 2 2 A3|2 15.0 cM NOTCH1 4851 0 caagtgactcctcaagagaccca gccttatccttctggagtctgga 1 15 5 1.1.1.1.5.15 BCBC-5A-0 14092870 P107037 Dpysl3 DistalPromoter P107037 DistalPromoter Unique Tile chr18:43519941-43521946 (-) NM_009468 - 1279 43518662 22240 Dpysl3 CRMP-4|TUC4|Ulip|Ulip1 dihydropyrimidinase-like 3 MGI:1349762 Mm.391902; Mm.428551; Mm.8180; Mm.391902; Mm.428551; Mm.8180; Mm.391902; Mm.428551; Mm.8180; Mm.391902; Mm.428551; Mm.8180; Mm.391902; Mm.428551; Mm.8180; Mm.391902; Mm.428551; Mm.8180; Mm.391902; Mm.428551; Mm.8180; Mm.391902; Mm.428551; Mm.8180; Mm.391902; Mm.428551; Mm.8180; Mm.391902; Mm.428551; Mm.8180; Mm.391902; Mm.428551; Mm.8180; Mm.391902; Mm.428551; Mm.8180 18 18 B3 DPYSL3 1809 0 tatctcttccacagtcagcaggc acagaaagaggattccaaatgcc 1 15 6 1.1.1.1.6.15 BCBC-5A-0 14092889 P105303 Arpc1b DistalPromoter P105303 DistalPromoter Unique Tile chr5:145372535-145374528 (+) NM_023142 + 657 145375185 11867 Arpc1b 41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|MGC102425|SOP2Hs|p41-ARC actin related protein 2/3 complex, subunit 1B MGI:1343142 Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491; Mm.30010; Mm.359491 5 5 G2 ARPC1B 10095 NM_001033313 - 19088 145393616 231887 Pdap1 0 cagccctggacttccactagaat tattttcatgcctgggatctcct 1 15 7 1.1.1.1.7.15 BCBC-5A-0 14092908 P106225 Tmem54 DistalPromoter P106225 DistalPromoter Unique Tile chr4:128604413-128606513 (+) NM_025452 + 1391 128607904 66260 Tmem54 1810017F10Rik|AI507302 transmembrane protein 54 MGI:1913510 Mm.25295 4 4 D2.2 TMEM54 113452 NM_010471 - 14549 128621062 15444 Hpca 1 gaactcaggacctctggaagagc ctggatcagcacattcagcttct 1 15 8 1.1.1.1.8.15 BCBC-5A-0 14092927 P001080 Blank P001080 Buffer Control Negative Blank 1 15 9 1.1.1.1.9.15 BCBC-5A-0 14092946 P202758 Aldh2 ProximalPromoter P202758 ProximalPromoter Unique Tile chr5:121879489-121880392 (-) NM_009656 - 25048 121854441 11669 Aldh2 Ahd-5|Ahd5 aldehyde dehydrogenase 2, mitochondrial MGI:99600 Mm.284446 5 5 F-G1 ALDH2 217 NM_028037 - 40700 121921092 71985 Acad10 2 ctaggaattccacccagggtatc aaaacaaaccagaagactcagcg 1 15 10 1.1.1.1.10.15 BCBC-5A-0 14092965 P202063 Lmbr1l ProximalPromoter P202063 ProximalPromoter Unique Tile chr15:98746364-98747448 (-) NM_029098 - 232 98746132 74775 Lmbr1l 1110013E13Rik|AA415653|D15Ertd735e|Limr limb region 1 like MGI:1289247 Mm.385020 15 15 F1|15 60.4 cM LMBR1L 55716 NM_011654 - 14973 98762421 22143 Tuba2 0 ctgaacccacagatgtagaaccc tgataggacattctgggaaagga 1 15 11 1.1.1.1.11.15 BCBC-5A-0 14092984 P204368 Eps15l1 ProximalPromoter P204368 ProximalPromoter Unique Tile chr8:75350681-75351770 (-) NM_007944 - 232 75350449 13859 Eps15l1 9830147J04Rik|AI593686|Eps15-rs|Eps15R epidermal growth factor receptor pathway substrate 15-like 1 MGI:104582 Mm.288894 8 8 C1 EPS15L1 58513 NM_029782;NM_028500; - 12375 75364145 73316 Calr3 0 agctcagtgggtaaagatgcttg ctgtcgcatagccttaccagagt 1 15 12 1.1.1.1.12.15 BCBC-5A-0 14093003 P205306 Hspb2 ProximalPromoter P205306 ProximalPromoter Unique Tile chr9:50504393-50505398 (+) NM_024441 - 130 50504523 69253 Hspb2 27kDa|2810021G24Rik|HSP27|MKBP heat shock protein 2 MGI:1916503 Mm.1980 9 9 A5.3|9 29.0 cM HSPB2 3316 NM_009964 + 149 50505249 12955 Cryab 2 catctgagtcctaccttctccga ggggttttattatcccagctcac 1 15 13 1.1.1.1.13.15 BCBC-5A-0 14093022 P205482 Hes5 ProximalPromoter P205482 ProximalPromoter Unique Tile chr4:153803867-153804863 (+) NM_010419 + 91 153804772 15208 Hes5 - hairy and enhancer of split 5 (Drosophila) MGI:104876 Mm.137268 4 4 E2|4 81.5 cM HES5 388585 NM_172990 + 3069 153807932 269614 Pank4 1 agtagtgatcacggacagcatga cgagttgcacttactcggttttt 1 15 14 1.1.1.1.14.15 BCBC-5A-0 14093041 P206036 ProximalPromoter P206036 ProximalPromoter Unique Tile chrX:39672882-39673869 (-) 0 cctgaaccagtctcagttccact gggaaggaagtaagccagaagaa 1 15 15 1.1.1.1.15.15 BCBC-5A-0 14093060 P200573 Asz1 ProximalPromoter P200573 ProximalPromoter Unique Tile chr6:18058916-18059940 (-) NM_023729 - 139 18059055 74068 Asz1 4933400N19Rik|Gasz|ORF3 ankyrin repeat, SAM and basic leucine zipper domain containing 1 MGI:1921318 Mm.73091 6 6 A2 ASZ1 136991 0 tctaccagaggtcacaacccaat ttgccttctccactacctgagag 1 15 16 1.1.1.1.16.15 BCBC-5A-0 14093079 P207843 1700001G17Rik ProximalPromoter P207843 ProximalPromoter Unique Tile chr1:33613479-33614502 (+) NM_026204 + 133 33614369 67503 1700001G17Rik - RIKEN cDNA 1700001G17 gene MGI:1914753 Mm.87069 1 1 B NM_008922 - 198 33614304 19076 Prim2 0 gaaggctgtgagggtaactagca tcaaaagaactcacatccgtcaa 1 15 17 1.1.1.1.17.15 BCBC-5A-0 14093098 P207909 4930583H14Rik ProximalPromoter P207909 ProximalPromoter Unique Tile chr3:51484589-51485576 (-) NM_026358 - 120 51484469 67749 4930583H14Rik AI195347|Osap RIKEN cDNA 4930583H14 gene MGI:1914999 Mm.273339 3 3 C OSAP 84709 NM_025523 - 11300 51496876 66377 Ndufc1 2 aggacacccagagctacacagag ggtccccttacccagctctaata 1 15 18 1.1.1.1.18.15 BCBC-5A-0 14093117 P001631 Blank P001631 Buffer Control Negative Blank 1 15 19 1.1.1.1.19.15 BCBC-5A-0 14092776 P100666 Atox1 ProximalPromoter P100666 ProximalPromoter Unique Tile chr11:55304826-55305823 (-) NM_009720 - 265 55304561 11927 Atox1 AI256639|Atx1 ATX1 (antioxidant protein 1) homolog 1 (yeast) MGI:1333855 Mm.217759 11 11 B1.3 ATOX1 475 NM_013716 + 7350 55313173 27041 RP23-336J1.4 0 aattactgagccatctcgcca cactaggtcccgcctctcttt 1 16 1 1.1.1.1.1.16 BCBC-5A-0 14092795 P101788 Zfp289 ProximalPromoter P101788 ProximalPromoter Unique Tile chr2:91064780-91065731 (+) NM_023854 + 389 91066120 77038 Zfp289 2310032E02Rik zinc finger protein 289 MGI:1924288 Mm.43636 2 2 E1 ZNF289 84364 NM_028733;NM_030880; + 6613 91058167 80708 Pacsin3 0 gagcagggctgtagacgaaga cagctcacaatccagcaactg 1 16 2 1.1.1.1.2.16 BCBC-5A-0 14092814 P102549 Aldh1a2 ProximalPromoter P102549 ProximalPromoter Unique Tile chr9:71013343-71014352 (+) NM_009022 + 29 71014381 19378 Aldh1a2 AV116159|Aldh1a7|RALDH-2|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 MGI:107928 Mm.42016 9 9 D|9 42.0 cM ALDH1A2 8854 1 tctgcacagaatctaagcaccaa gtatataggcaggtgtcaagcgg 1 16 3 1.1.1.1.3.16 BCBC-5A-0 14092833 P103671 Rprm ProximalPromoter P103671 ProximalPromoter Unique Tile chr2:53901185-53902252 (-) NM_023396 - 247 53900938 67874 Rprm 2410012A13Rik|Reprimo reprimo, TP53 dependent G2 arrest mediator candidate MGI:1915124 Mm.27086 2 2 C1 RPRM 56475 0 taaaaggctctcctttgtgcttg ttggagagaaaggctgaaagttg 1 16 4 1.1.1.1.4.16 BCBC-5A-0 14092852 P104415 Pik3ca DistalPromoter P104415 DistalPromoter Unique Tile chr3:32624676-32626720 (+) NM_008839 + 1034 32627754 18706 Pik3ca 6330412C24Rik|caPI3K|p110 phosphatidylinositol 3-kinase, catalytic, alpha polypeptide MGI:1206581 Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949; Mm.260521; Mm.393204; Mm.394949 3 3 B|3 12.4 cM PIK3CA 5290 0 tccttccttccttccttccttct tgttcctccgaaagagcagtatg 1 16 5 1.1.1.1.5.16 BCBC-5A-0 14092871 P107059 Zfpm1 DistalPromoter P107059 DistalPromoter Unique Tile chr8:125165172-125167033 (+) NM_009569 + 1197 125168230 22761 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 MGI:1095400 Mm.390068 8 8 E1 ZFPM1 161882 0 gtctgtggagtcctttccaaggt cagtatgagatttgcagcttccg 1 16 6 1.1.1.1.6.16 BCBC-5A-0 14092890 P105327 Ctnnbip1 DistalPromoter P105327 DistalPromoter Unique Tile chr4:148358532-148360477 (+) NM_023465 + 1565 148362042 67087 Ctnnbip1 1110008O09Rik|2310001I19Rik|AW457332|Catnbip1|ICAT catenin beta interacting protein 1 MGI:1915756 Mm.299735; Mm.391947; Mm.299735; Mm.391947; Mm.299735; Mm.391947; Mm.299735; Mm.391947; Mm.299735; Mm.391947; Mm.299735; Mm.391947; Mm.299735; Mm.391947; Mm.299735; Mm.391947 4 4 E2 CTNNBIP1 56998 NM_026963 + 29400 148329132 69151 Lzic 0 ttagacacacagtcaggccaaca gtagcacagcaggttggaaaatg 1 16 7 1.1.1.1.7.16 BCBC-5A-0 14092909 P106168 Fbxo9 DistalPromoter P106168 DistalPromoter Unique Tile chr9:77895541-77897650 (-) NM_023605 - 1230 77894311 71538 Fbxo9 9030401P18Rik|AA986398 f-box only protein 9 MGI:1918788 Mm.28584 9 9 E1 FBXO9 26268 NM_019987 + 1442 77899092 56542 Ick 0 ctcagatcactccttttgctcca tgtccttggctcctcccttatag 1 16 8 1.1.1.1.8.16 BCBC-5A-0 14092928 P001176 Blank P001176 Buffer Control Negative Blank 1 16 9 1.1.1.1.9.16 BCBC-5A-0 14092947 P202783 C030019I05Rik ProximalPromoter P202783 ProximalPromoter Unique Tile chr11:46077871-46078913 (+) NM_177075 + 66 46078979 320116 C030019I05Rik MGC129498|MGC129499|MGC27121 RIKEN cDNA C030019I05 gene MGI:2443410 Mm.154358; Mm.39600; Mm.154358; Mm.39600; Mm.154358; Mm.39600 11 11 B1.1 NM_025981 - 8698 46087611 67124 2810416G20Rik 0 tcctcttgtgtgtgtgtctccat tccttgatgtttctcactcacca 1 16 10 1.1.1.1.10.16 BCBC-5A-0 14092966 P202087 Tnpo3 ProximalPromoter P202087 ProximalPromoter Unique Tile chr6:29559703-29560709 (-) NM_177296 - 86 29559617 320938 Tnpo3 5730544L10Rik|C430013M08Rik|C81142|D6Ertd313e|KIAA4133|MGC90049|Trn-SR|mKIAA4133 transportin 3 MGI:1196412 Mm.276381 6 6 A3|6 7.2 cM TNPO3 23534 2 gtgaagcagcaatattgggaaac tgcctcctttttgtcttgtcttc 1 16 11 1.1.1.1.11.16 BCBC-5A-0 14092985 P201276 AU021034 ProximalPromoter P201276 ProximalPromoter Unique Tile chr14:76823260-76824272 (-) NM_177629 - 98 76823162 219170 AU021034 9330158N17 expressed sequence AU021034 MGI:2145738 Mm.320428 14 14 D3 FLJ40919 144809 0 tccccaggatttagaacttgtga ggtgacattcaagagcacagttg 1 16 12 1.1.1.1.12.16 BCBC-5A-0 14093004 P205331 Ddt ProximalPromoter P205331 ProximalPromoter Unique Tile chr10:75217008-75217950 (-) NM_010027 - 73 75217081 13202 Ddt C78655 D-dopachrome tautomerase MGI:1298381 Mm.298947 10 10 C1|10 40.7 cM DDT 1652 NM_133994 - 6808 75224758 103140 Gstt3 0 taaccctgactgctgccttctac ggcaagtttgtttccaactcaac 1 16 13 1.1.1.1.13.16 BCBC-5A-0 14093023 P205507 Hspd1 ProximalPromoter P205507 ProximalPromoter Unique Tile chr1:55032232-55033235 (-) NM_010477 - 131 55032363 15510 Hspd1 60kDa|Hsp60 heat shock protein 1 (chaperonin) MGI:96242 Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944; Mm.1777; Mm.378944 1 1 C1.2 HSPD1 3329 NM_008303 + 302 55032933 15528 Hspe1 0 ccaacataggacacatccactga ccagacttctccccctagtcct 1 16 14 1.1.1.1.14.16 BCBC-5A-0 14093042 P206062 Spry4 ProximalPromoter P206062 ProximalPromoter Unique Tile chr18:38727531-38728592 (-) NM_011898 - 289 38727242 24066 Spry4 A030006O18Rik|sprouty4 sprouty homolog 4 (Drosophila) MGI:1345144 Mm.42038 18 18 B3|18 18.0 cM SPRY4 81848 NM_001033771 + 24 38727507 381155 9630014M24Rik 1 catcaaagccatctctatcccag cttttacaaagaggggtggaggt 1 16 15 1.1.1.1.15.16 BCBC-5A-0 14093061 P200507 4921509E07Rik ProximalPromoter P200507 ProximalPromoter Unique Tile chr12:79609132-79610100 (+) NM_027597 + 414 79610514 70897 4921509E07Rik 4930516C23Rik RIKEN cDNA 4921509E07 gene MGI:1918147 Mm.56514 12 12 D2 C14orf54 161142 2 gtaatcccaaaactctggaggct tccagtacttatgaggcagaggc 1 16 16 1.1.1.1.16.16 BCBC-5A-0 14093080 P207867 4921537P18Rik ProximalPromoter P207867 ProximalPromoter Unique Tile chr8:28912786-28913743 (+) NM_026256 + 138 28913605 70952 4921537P18Rik 4930456F22Rik RIKEN cDNA 4921537P18 gene MGI:1918202 Mm.158160 8 8 A2 NM_021369 - 32906 28879880 11440 Chrna6 2 tattttgagggcaggttgaggta gtcccttccaaacctctcatctt 1 16 17 1.1.1.1.17.16 BCBC-5A-0 14093099 P207933 Rab32 ProximalPromoter P207933 ProximalPromoter Unique Tile chr10:10248646-10249612 (-) NM_026405 - 249 10248397 67844 Rab32 2810011A17Rik|AU022057 RAB32, member RAS oncogene family MGI:1915094 Mm.31486 10 10 A1 RAB32 10981 1 tcatcaaaactctcccagtcaca atttccatcgtctgctatgctgt 1 16 18 1.1.1.1.18.16 BCBC-5A-0 14093118 P001727 Blank P001727 Buffer Control Negative Blank 1 16 19 1.1.1.1.19.16 BCBC-5A-0 14092777 P100972 Reg3a ProximalPromoter P100972 ProximalPromoter Unique Tile chr6:78309218-78310314 (+) NM_011259 + 97 78310217 19694 Reg3a AV063448 regenerating islet-derived 3 alpha MGI:109408 Mm.2552 6 6 C3|6 33.5 cM NM_013893 - 846 78308372 30053 Reg3d 0 gaggggttactcttccatcgg caccatcattcagctcccact 1 17 1 1.1.1.1.1.17 BCBC-5A-0 14092796 P101812 Rab6 ProximalPromoter P101812 ProximalPromoter Unique Tile chr7:100480402-100481304 (+) NM_024287 + 545 100481849 19346 Rab6 2610028L11Rik|AA419671 RAB6, member RAS oncogene family MGI:894313 Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700; Mm.28650; Mm.394907; Mm.422700 7 7 C4 RAB6A 5870 NM_198831;NM_026971; - 779 100482083 52443 Mrpl48 0 ctgggggttgggattacagat cacccgtttaccctagccttc 1 17 2 1.1.1.1.2.17 BCBC-5A-0 14092815 P102573 Rrm2 ProximalPromoter P102573 ProximalPromoter Unique Tile chr12:25295912-25296911 (+) NM_009104 + 421 25297332 20135 Rrm2 AA407299|MGC113712|R2 ribonucleotide reductase M2 MGI:98181 Mm.99 12 12 A1.3|12 7.0 cM RRM2 6241 NM_001004455;NM_138686; - 25038 25270874 12879 Cys1 0 acatctaaggtcacctgaaagcg cttcaaactcatgaaggggtacg 1 17 3 1.1.1.1.3.17 BCBC-5A-0 14092834 P103695 Nfx1 ProximalPromoter P103695 ProximalPromoter Unique Tile chr4:41158199-41159252 (+) NM_023739 + 361 41159613 74164 Nfx1 1300017N15Rik|3000003M19Rik|NFX.1|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 MGI:1921414 Mm.247456 4 4 B1|4 19.9 cM NFX1 4799 NM_029814 + 20937 41137262 76959 Chmp5 2 ccctcctcttgtctctctcatca taaaaggttacctgccaagggtt 1 17 4 1.1.1.1.4.17 BCBC-5A-0 14092853 P104349 Rnf151 DistalPromoter P104349 DistalPromoter Unique Tile chr17:24444807-24446855 (+) NM_026205 - 850 24445657 67504 Rnf151 1700010O16Rik|AV047371 ring finger protein 151 MGI:1914754 Mm.46159 17 17 A3.3 RNF151 146310 NM_008503 + 853 24447708 16898 Rps2 0 agagcaagtcttcatggggaaac ttgctctggcccaaagatttatt 1 17 5 1.1.1.1.5.17 BCBC-5A-0 14092872 P107080 Neurog2 DistalPromoter P107080 DistalPromoter Unique Tile chr3:127621982-127624004 (+) NM_009718 + 1162 127625166 11924 Neurog2 Atoh4|Math4A|ngn-2|ngn2 neurogenin 2 MGI:109619 Mm.42017 3 3 H1 NEUROG2 63973 1 tggaggcagtgctaagtttcttg gcgagtggatcactctgacactt 1 17 6 1.1.1.1.6.17 BCBC-5A-0 14092891 P105351 Cstf1 DistalPromoter P105351 DistalPromoter Unique Tile chr2:172060942-172062924 (+) NM_024199 + 717 172062207 67337 Cstf1 1700057K18Rik|AI788832 cleavage stimulation factor, 3' pre-RNA, subunit 1 MGI:1914587 Mm.26944 2 2 H3|2 99.0 cM CSTF1 1477 NM_011497 - 769 172061711 20878 Aurka 0 ccccagacaggctctcacttatt tctctaactccagttccaagggg 1 17 7 1.1.1.1.7.17 BCBC-5A-0 14092910 P106190 Ndufa10 DistalPromoter P106190 DistalPromoter Unique Tile chr1:94305364-94307462 (-) NM_024197 - 1200 94304164 67273 Ndufa10 2900053E13Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 MGI:1914523 Mm.248778 1 1 D NDUFA10 4705 NM_147038 - 3563 94311025 259040 Olfr1416 1 gcatgacgaaggtacagctcagt tgaatccagcaacacatgaaatg 1 17 8 1.1.1.1.8.17 BCBC-5A-0 14092929 P203512 Slc26a8 ProximalPromoter P203512 ProximalPromoter Unique Tile chr17:28417584-28418666 (-) NM_146076 - 8 28417576 224661 Slc26a8 MGC38861 solute carrier family 26, member 8 MGI:2385046 Mm.219530 17 17 A3.3|17 13.4 cM SLC26A8 116369 NM_011951 + 264 28418930 26416 Mapk14 0 caacctgctcactagagtcgtca ttacgggtctaactttccccatt 1 17 9 1.1.1.1.9.17 BCBC-5A-0 14092948 P202807 Qpctl ProximalPromoter P202807 ProximalPromoter Unique Tile chr7:18328208-18329234 (-) NM_026111 - 20480 18307728 67369 Qpctl 1810019P04Rik|BB101812 glutaminyl-peptide cyclotransferase-like MGI:1914619 Mm.234876 7 7 A3 QPCTL 54814 NM_026943 + 19819 18308389 107686 Snrpd2 0 ggaccgaagacagaaagacagaa aacacaaaggaaacgcactgaat 1 17 10 1.1.1.1.10.17 BCBC-5A-0 14092967 P202113 RP23-143A14.5 ProximalPromoter P202113 ProximalPromoter Unique Tile chr11:74995249-74996300 (-) NM_027136 - 246 74995003 246257 RP23-143A14.5 9030414M07Rik|Ovca2 candidate tumor suppressor OVCA2 MGI:2179725 Mm.41496 11 11 B5 OVCA2 124641 NM_010430 - 9535 74985714 15248 Hic1 0 agctactatgtgggtgttgggaa gtctctctactgcaacctccacc 1 17 11 1.1.1.1.11.17 BCBC-5A-0 14092986 P201300 Stch ProximalPromoter P201300 ProximalPromoter Unique Tile chr16:75649324-75650392 (-) NM_030201 - 134 75649458 110920 Stch 1600002I10Rik|AV006182|B230217N24Rik stress 70 protein chaperone, microsome-associated, human homolog MGI:1309463 Mm.26704; Mm.428715; Mm.26704; Mm.428715; Mm.26704; Mm.428715; Mm.26704; Mm.428715; Mm.26704; Mm.428715; Mm.26704; Mm.428715; Mm.26704; Mm.428715; Mm.26704; Mm.428715; Mm.26704; Mm.428715; Mm.26704; Mm.428715 16 16 47.2 cM STCH 6782 0 aggggaaaagtgatcggatagtc cagagagtgagacaaccaaccct 1 17 12 1.1.1.1.12.17 BCBC-5A-0 14093005 P205263 Cdc42 ProximalPromoter P205263 ProximalPromoter Unique Tile chr4:136629975-136631061 (-) NM_009861 - 234 136629741 12540 Cdc42 AI747189|AU018915 cell division cycle 42 homolog (S. cerevisiae) MGI:106211 Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418 4 4 D3|4 66.75 cM CDC42 998 0 atcttctatgcaaccaagggtca ctatgaacaatgatgtgcacggt 1 17 13 1.1.1.1.13.17 BCBC-5A-0 14093024 P205531 Il6ra ProximalPromoter P205531 ProximalPromoter Unique Tile chr3:89999367-90000312 (-) NM_010559 - 278 89999089 16194 Il6ra CD126|IL-6R|Il6r|MGC30256 interleukin 6 receptor, alpha MGI:105304 Mm.2856 3 3 F1|3 42.1 cM IL6R 3570 2 tgtcttatttaggggttcagcca aaggagaaatatccccctccttc 1 17 14 1.1.1.1.14.17 BCBC-5A-0 14093043 P206087 Map2k7 ProximalPromoter P206087 ProximalPromoter Unique Tile chr8:4237672-4238595 (+) NM_001042557;NM_011944; + 232 4238827 26400 Map2k7 5930412N11Rik|Jnkk2|MKK7|Prkmk7|sek2 mitogen activated protein kinase kinase 7 MGI:1346871 Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794; Mm.3906; Mm.405794 8 8 A1.1 MAP2K7 5609 NM_028175 + 10846 4226826 72267 Lrrc8e 0 cctctaaaacagttggatggtgg aaaaagagagaaagcgaagtccg 1 17 15 1.1.1.1.15.17 BCBC-5A-0 14093062 P200531 4930583K01Rik ProximalPromoter P200531 ProximalPromoter Unique Tile chr7:118034019-118035096 (+) NM_183267 + 41 118035055 67745 4930583K01Rik - RIKEN cDNA 4930583K01 gene MGI:1914995 Mm.261019 7 7 F1 NM_001031814 - 310 118034786 233789 2610207I05Rik 0 gttaaggtggtctttggcatgag ctctcagaactccagtgcctctc 1 17 16 1.1.1.1.16.17 BCBC-5A-0 14093081 P210606 Ttc12 ProximalPromoter P210606 ProximalPromoter Unique Tile chr9:49238365-49239308 (-) NM_172770 - 90 49238455 235330 Ttc12 E330017O07Rik tetratricopeptide repeat domain 12 MGI:2444588 Mm.177413 9 9 A5.3 TTC12 54970 0 ctccatccggaatagcatacttg gctagactgacctttagtgccca 1 17 17 1.1.1.1.17.17 BCBC-5A-0 14093100 P207958 1700129C05Rik ProximalPromoter P207958 ProximalPromoter Unique Tile chr14:58096845-58097768 (-) NM_026461 - 158 58097003 67932 1700129C05Rik - RIKEN cDNA 1700129C05 gene MGI:1915182 Mm.65550 14 14 C3 NM_001004158 - 35062 58132830 380907 LOC380907 0 agtgtttaacctctttcccagcc tgaggtgggaagaaatgaatgtt 1 17 18 1.1.1.1.18.17 BCBC-5A-0 14093119 P001727 Blank P001727 Buffer Control Negative Blank 1 17 19 1.1.1.1.19.17 BCBC-5A-0 14092778 P100996 Apcs ProximalPromoter P100996 ProximalPromoter Unique Tile chr1:174732058-174732972 (-) NM_011318 - 342 174731716 20219 Apcs Sap serum amyloid P-component MGI:98229 Mm.330510 1 1 H3|1 94.2 cM APCS 325 0 attataggcaagggggagcaa ttctgccaagcaccctaaaaa 1 18 1 1.1.1.1.1.18 BCBC-5A-0 14092797 P101746 Jam3 ProximalPromoter P101746 ProximalPromoter Unique Tile chr9:26905147-26906099 (-) NM_023277 - 308 26904839 83964 Jam3 1110002N23Rik|C85515|JAM-3|JAM-C|Jcam3 junction adhesion molecule 3 MGI:1933825 Mm.28770 9 9 A4 JAM3 83700 0 ctccatatgctcattgtggca ctggagagatggctcagcagt 1 18 2 1.1.1.1.2.18 BCBC-5A-0 14092816 P102597 Srp14 ProximalPromoter P102597 ProximalPromoter Unique Tile chr2:118171338-118172420 (-) NM_009273 - 201 118171137 20813 Srp14 14kDa|AW536328 signal recognition particle 14 MGI:107169 Mm.363404 2 2 E5 SRP14 6727 0 gaccgagaagcactccaaaacta cccaagagtccactgactcactt 1 18 3 1.1.1.1.3.18 BCBC-5A-0 14092835 P103719 Phf10 ProximalPromoter P103719 ProximalPromoter Unique Tile chr17:14693328-14694422 (-) NM_024250 - 109 14693437 72057 Phf10 1810055P05Rik PHD finger protein 10 MGI:1919307 Mm.260474 17 17 A2 PHF10 55274 NM_026451 + 13475 14679853 67912 1600012H06Rik 0 ttatggagatcgacacgttcctt aggaggtcacacccagatattca 1 18 4 1.1.1.1.4.18 BCBC-5A-0 14092854 P104373 Mtap7 DistalPromoter P104373 DistalPromoter Unique Tile chr10:19835073-19836920 (+) NM_008635 + 1479 19838399 17761 Mtap7 E-MAP-115|MAP7|R75000 microtubule-associated protein 7 MGI:1328328 Mm.20928 10 10 A3|10 11.0 cM MAP7 9053 0 agaggaattgaactgaacagggc catttatacccctccagagtgcc 1 18 5 1.1.1.1.5.18 BCBC-5A-0 14092873 P104919 Atp6v0d1 DistalPromoter P104919 DistalPromoter Unique Tile chr8:108455927-108457737 (-) NM_013477 - 758 108455169 11972 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 MGI:1201778 Mm.17708 8 8 D3 ATP6V0D1 9114 NM_007427 - 310 108457427 11604 Agrp 1 cacacatgcaggcaaaaacaata gcagtagcaaaaggcattgaaga 1 18 6 1.1.1.1.6.18 BCBC-5A-0 14092892 P105375 DistalPromoter P105375 DistalPromoter Unique Tile chr3:86759284-86761223 (-) 0 tggagtaactgtcaatgggagga ccctgggttgattggctacttac 1 18 7 1.1.1.1.7.18 BCBC-5A-0 14092911 P106212 Spop DistalPromoter P106212 DistalPromoter Unique Tile chr11:95227211-95229023 (+) NM_025287 + 1179 95230202 20747 Spop AI315626|Pcif1|TEF2 speckle-type POZ protein MGI:1343085 Mm.285454 11 11 D|11 55.6 cM SPOP 8405 NM_016752 + 26181 95201030 110172 Slc35b1 0 caaggagcactgaattgaattgg tctgagagatcaacccagtgacc 1 18 8 1.1.1.1.8.18 BCBC-5A-0 14092930 P203536 Slpi ProximalPromoter P203536 ProximalPromoter Unique Tile chr2:164048141-164049044 (-) NM_011414 - 193 164047948 20568 Slpi - secretory leukocyte peptidase inhibitor MGI:109297 Mm.371583 2 - SLPI 6590 NM_009301 + 23936 164024205 20944 Svs5 1 ctttcctaaggatgagcccagtt taatgttcctggactttctggga 1 18 9 1.1.1.1.9.18 BCBC-5A-0 14092949 P202740 ProximalPromoter P202740 ProximalPromoter No Hits Tile 0 agatagcccacatccaattgcta cttggcttgagtaggtaggcaga 1 18 10 1.1.1.1.10.18 BCBC-5A-0 14092968 P202137 Dhrs9 ProximalPromoter P202137 ProximalPromoter Unique Tile chr2:69180181-69181145 (+) NM_175512 + 155 69181300 241452 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 MGI:2442798 Mm.211655 2 2 C2 DHRS9 10170 NM_021022 - 36755 69143426 27413 Abcb11 0 gagcggcactgagtgagattatt tgctatcttgaccaaaggaggag 1 18 11 1.1.1.1.11.18 BCBC-5A-0 14092987 P201324 Mum1l1 ProximalPromoter P201324 ProximalPromoter Unique Tile chrX:134580277-134581237 (+) NM_175541 + 111 134581348 245631 Mum1l1 9430086K21Rik melanoma associated antigen (mutated) 1-like 1 MGI:2445062 Mm.131001 X X F1 MUM1L1 139221 0 acttgattttgcttcctgctttg tgtgctttccacggtaattttct 1 18 12 1.1.1.1.12.18 BCBC-5A-0 14093006 P205287 Cxcr6 ProximalPromoter P205287 ProximalPromoter Unique Tile chr9:123614780-123615775 (+) NM_030712 + 39421 123655196 80901 Cxcr6 BB217514|BONZO|BONZO-like|STRL33 chemokine (C-X-C motif) receptor 6 MGI:1934582 Mm.124289 9 9 F|9 71.4 cM CXCR6 10663 NM_033322 - 48525 123566255 93730 Lztfl1 0 cattggacactgtcagagactgg agctaaggaccaccagggttaag 1 18 13 1.1.1.1.13.18 BCBC-5A-0 14093025 P201566 Gbl ProximalPromoter P201566 ProximalPromoter Unique Tile chr17:24206772-24207763 (-) NM_019988 - 94 24206678 56716 Gbl 0610033N12Rik|AA409454|AI505104|AI851821 G protein beta subunit-like MGI:1929514 Mm.289516 17 17 A3.3 GBL 64223 NM_175682 + 5289 24201483 319259 9930021D14Rik 0 gaatctgggagagaggagagagg cgaagaactccagaagtgatcgt 1 18 14 1.1.1.1.14.18 BCBC-5A-0 14093044 P206111 ProximalPromoter P206111 ProximalPromoter No Hits Tile 0 ctgcaccagactcttttccttgt gctttctatgacccgactttcct 1 18 15 1.1.1.1.15.18 BCBC-5A-0 14093063 P200555 Olfr112 ProximalPromoter P200555 ProximalPromoter Unique Tile chr17:37177389-37178379 (-) NM_001013575 - 113 37177502 258096 Olfr112 4930580F03Rik|MOR218-4 olfactory receptor 112 MGI:2177495 Mm.159619 17 17 B1 NM_146289 - 5095 37183474 258286 Olfr113 0 ggagcattttgcaatatttggag tcagaaaagtataaggcccccat 1 18 16 1.1.1.1.16.18 BCBC-5A-0 14093082 P210630 1700019P01Rik ProximalPromoter P210630 ProximalPromoter Unique Tile chr15:88782030-88783082 (-) NM_172818 - 146 88782176 239591 1700019P01Rik 4933401B17 RIKEN cDNA 1700019P01 gene MGI:1922902 Mm.86807 15 15 E3 RP3-355C18.2 164714 NM_133241 - 23237 88806319 170790 Mlc1 2 aagtctaggtaccagggccactc ggagctaagaaggagaggtcgag 1 18 17 1.1.1.1.17.18 BCBC-5A-0 14093101 P207891 1700016G05Rik ProximalPromoter P207891 ProximalPromoter Unique Tile chr6:40449263-40450334 (-) NM_026317 - 148 40449115 67690 1700016G05Rik - RIKEN cDNA 1700016G05 gene MGI:1914940 Mm.52550 6 6 B2 LOC136242 136242 NM_146382 - 24250 40474584 258380 Olfr461 0 caccctgggacatacagaaagac cctttgacagttaggaaacggtg 1 18 18 1.1.1.1.18.18 BCBC-5A-0 14093120 P001823 Cy3 Anchor P001823 Anchor Control Positive Cy3 Anchor 1 18 19 1.1.1.1.19.18 BCBC-5A-0 14092779 P101020 Stau1 ProximalPromoter P101020 ProximalPromoter Unique Tile chr2:166687663-166688669 (-) NM_011490 - 159 166687504 20853 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen (RNA binding protein) homolog 1 (Drosophila) MGI:1338864 Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276 2 2 H3 STAU1 6780 0 aaggagactgggctgttaggc gtagtttcccaggagctcggt 1 19 1 1.1.1.1.1.19 BCBC-5A-0 14092798 P101770 Tnfsf13 ProximalPromoter P101770 ProximalPromoter Unique Tile chr11:69502387-69503309 (-) NM_023517 - 638 69501749 69583 Tnfsf13 2310026N09Rik|APRIL|MGC106105|TALL2|TRDL1|Tnfsf12 tumor necrosis factor (ligand) superfamily, member 13 MGI:1916833 Mm.8983 11 11 B4 TNFSF13 8741 NM_030702 - 4346 69498041 80886 Senp3 0 ttgcttgcctctctctgttcc ccaggtgggttttgttgttgt 1 19 2 1.1.1.1.2.19 BCBC-5A-0 14092817 P102903 Kcna1 ProximalPromoter P102903 ProximalPromoter Unique Tile chr6:126610701-126611689 (-) NM_010595 - 286 126610415 16485 Kcna1 AI840627|Kca1-1|Kv1.1|MBK1|MGC124402|Mk-1|Shak|mceph potassium voltage-gated channel, shaker-related subfamily, member 1 MGI:96654 Mm.40424 6 6 F1-F3|6 61.0 cM KCNA1 3736 0 ggagaggagcgaacaaacactta ggaatttcacattggagatggtc 1 19 3 1.1.1.1.3.19 BCBC-5A-0 14092836 P103743 Lsm7 ProximalPromoter P103743 ProximalPromoter Unique Tile chr10:80258194-80259148 (-) NM_025349 - 127 80258321 66094 Lsm7 0910001B06Rik|1110033F18Rik LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) MGI:1913344 Mm.379101 10 10 C1 LSM7 51690 NM_175195 + 199 80258393 73218 3110056O03Rik 0 tttgctttgagttccaggttagc cagcaccctgtctccctactcta 1 19 4 1.1.1.1.4.19 BCBC-5A-0 14092855 P104397 DistalPromoter P104397 DistalPromoter Unique Tile chr6:85038897-85040846 (+) 0 aagcaacttcatttttcttgggc tttggatgcttagtcatcaggga 1 19 5 1.1.1.1.5.19 BCBC-5A-0 14092874 P104943 Rps16 DistalPromoter P104943 DistalPromoter Unique Tile chr7:28056528-28058362 (+) NM_013647 + 1147 28059509 20055 Rps16 AA420385|AI317031 ribosomal protein S16 MGI:98118 Mm.702 7 7 A3 RPS16 6217 NM_013676 - 9049 28047479 20924 Supt5h 0 gttataaggttgggggctaaggc ggaggacattaagggatgtggag 1 19 6 1.1.1.1.6.19 BCBC-5A-0 14092893 P105309 Nit2 DistalPromoter P105309 DistalPromoter Unique Tile chr16:57089885-57092007 (-) NM_023175 - 1194 57088691 52633 Nit2 1190017B19Rik|D16Ertd502e nitrilase family, member 2 MGI:1261838 Mm.383203 16 16 C1.1|16 38.0 cM NIT2 56954 NM_138599 + 46813 57043072 28185 Tomm70a 0 gtgatttacccgccttttctttg tatggccttatgtcttccagggt 1 19 7 1.1.1.1.7.19 BCBC-5A-0 14092912 P106233 2310042G06Rik DistalPromoter P106233 DistalPromoter Unique Tile chr2:174117227-174119255 (-) NM_025531 - 1347 174115880 66390 2310042G06Rik AA407013 RIKEN cDNA 2310042G06 gene MGI:1913640 Mm.182294 2 2 H4 C20orf45 51012 NM_025983 - 10197 174107030 67126 Atp5e 0 gctgtcccaaagtgagtgacaat atgttttaagggctgctgagagg 1 19 8 1.1.1.1.8.19 BCBC-5A-0 14092931 P203560 Pde4c ProximalPromoter P203560 ProximalPromoter Unique Tile chr8:73651897-73652837 (+) NM_201607 + 215 73653052 110385 Pde4c Dpde1|E130301F19Rik|MGC31320|dunce phosphodiesterase 4C, cAMP specific MGI:99556 Mm.255180 8 8 33.0 cM PDE4C 5143 NM_010592 + 23943 73627954 16478 Jund1 1 atccacatgacttaagaagccca ggaaagctgttctgctatgctgt 1 19 9 1.1.1.1.9.19 BCBC-5A-0 14092950 P202765 Flcn ProximalPromoter P202765 ProximalPromoter Unique Tile chr11:59625838-59626878 (-) NM_146018 - 130 59625968 216805 Flcn AU014660|B430214A04Rik|Bhd|FLCL|MGC37841 folliculin MGI:2442184 Mm.339640 11 11 B1.3 FLCN 201163 NM_011991 - 29084 59655962 26572 Cops3 0 tcttaaccgctgaaccatctctc ctctcccaggtgtttaccatcc 1 19 10 1.1.1.1.10.19 BCBC-5A-0 14092969 P203802 2310015N21Rik ProximalPromoter P203802 ProximalPromoter Unique Tile chr17:49656110-49657144 (-) NM_181397 - 46 49656064 76438 2310015N21Rik AI853526 RIKEN cDNA 2310015N21 gene MGI:1923688 Mm.41854 17 17 C RAFTLIN 23180 NM_001004437 + 47826 49704970 446210 AY702103 1 taaaaagacaattcaggggcaga ttcctctgaactcatgtgcaaaa 1 19 11 1.1.1.1.11.19 BCBC-5A-0 14092988 P201348 Pex12 ProximalPromoter P201348 ProximalPromoter Unique Tile chr11:83115259-83116187 (-) NM_134025 - 87 83115172 103737 Pex12 AI451906 peroxisomal biogenesis factor 12 MGI:2144177 Mm.102205 11 11 C PEX12 5193 NM_027915;NM_001035854; + 2704 83118891 71770 Ap2b1 0 ccattggttagcatgcgatattt tgagtgcattctgttcctggtta 1 19 12 1.1.1.1.12.19 BCBC-5A-0 14093007 P205312 Cst7 ProximalPromoter P205312 ProximalPromoter Unique Tile chr2:150260632-150261653 (+) NM_009977 + 217 150261870 13011 Cst7 CMAP|MGC151424|MGC151426 cystatin F (leukocystatin) MGI:1298217 Mm.12965 2 2 G1-G3 CST7 8530 NM_027977 - 38311 150299964 71881 2310001A20Rik 0 cctgctcccacctagactactga atgtgaagaaaccaggggatttt 1 19 13 1.1.1.1.13.19 BCBC-5A-0 14093026 P201590 Umodl1 ProximalPromoter P201590 ProximalPromoter Unique Tile chr17:30710139-30711191 (+) NM_177465 + 29501 30681690 52020 Umodl1 D17Ertd488e uromodulin-like 1 MGI:1929785 Mm.25923 17 17 A3.3|17 17.0 cM UMODL1 89766 0 agggcactgtctatgaagacctg aacataccttgcacgaatgtcct 1 19 14 1.1.1.1.14.19 BCBC-5A-0 14093045 P206044 Pde10a ProximalPromoter P206044 ProximalPromoter Unique Tile chr17:8717855-8718767 (+) NM_011866 + 30608 8688159 23984 Pde10a - phosphodiesterase 10A MGI:1345143 Mm.87161 17 17 A1 PDE10A 10846 0 atgtagcgtagcttagcacctgg ctcttgagggaggagaagaaagg 1 19 15 1.1.1.1.15.19 BCBC-5A-0 14093064 P200579 ProximalPromoter P200579 ProximalPromoter Intra Repeat: LINE Tile chr10:104267917-104268895 (+) 0 tgagagtttggccgggtatagta agaatacaagatggcaaaaggca 1 19 16 1.1.1.1.16.19 BCBC-5A-0 14093083 P210654 2810039F03Rik ProximalPromoter P210654 ProximalPromoter Unique Tile chr2:144218961-144219913 (-) NM_172859 - 122 144218839 241688 2810039F03Rik 6430408C01|MGC107224 RIKEN cDNA 2810039F03 gene MGI:1919971 Mm.291061 2 2 G1 C20orf12 55184 NM_029763 + 224 144219185 70408 Polr3f 0 ggagggattaatttgtttggagg cagatccttctgcgacactttct 1 19 17 1.1.1.1.17.19 BCBC-5A-0 14093102 P207915 ProximalPromoter P207915 ProximalPromoter No Hits Tile 1 caagtttgccccaatttcactac gtccacgaactgttctcgtcata 1 19 18 1.1.1.1.18.19 BCBC-5A-0 14093121 P001919 Cy3 Anchor P001919 Anchor Control Positive Cy3 Anchor 1 19 19 1.1.1.1.19.19 BCBC-5A-0 14093122 P100012 Adh1 ProximalPromoter P100012 ProximalPromoter Unique Tile chr3:138216187-138217216 (+) NM_007409 + 2165 138215051 11522 Adh1 ADH-AA|AI194826|Adh-1|Adh-1-t|Adh-1e|Adh-1t|Adh-3e|Adh1-e|Adh1-t|Adh1tl|Adh3-e alcohol dehydrogenase 1 (class I) MGI:87921 Mm.2409; Mm.412004; Mm.2409; Mm.412004; Mm.2409; Mm.412004; Mm.2409; Mm.412004; Mm.2409; Mm.412004 3 3 G3|3 71.2 cM ADH1C 126 2 ggaggggacagagaaagcagt aattcgaacttcatgggcctt 2 1 1 1.1.1.2.1.1 BCBC-5A-0 14093141 P100852 Jun ProximalPromoter P100852 ProximalPromoter Unique Tile chr4:94544548-94545641 (-) NM_010591 - 343 94544205 16476 Jun AP-1|Junc|c-jun Jun oncogene MGI:96646 Mm.275071 4 4 C5-C7|4 44.6 cM JUN 3725 1 actccgaagctggtagggaag ggtttggctgtctagtgacgg 2 1 2 1.1.1.2.2.1 BCBC-5A-0 14093160 P101602 Mrps31 ProximalPromoter P101602 ProximalPromoter Unique Tile chr8:23875349-23876389 (+) NM_020560 + 575 23876964 57312 Mrps31 1500002D03Rik|AA960481|Imogen38|Imogen44 mitochondrial ribosomal protein S31 MGI:1913153 Mm.289402 8 8 A3 MRPS31 10240 NM_181325;NM_011017; - 11251 23864098 18408 Slc25a15 0 catggccgacatccattatct ctgatcggctgattagaaccg 2 1 3 1.1.1.2.3.1 BCBC-5A-0 14093179 P102735 Cdc42 ProximalPromoter P102735 ProximalPromoter Unique Tile chr4:136608464-136609476 (-) NM_009861 - 21274 136629738 12540 Cdc42 AI747189|AU018915 cell division cycle 42 homolog (S. cerevisiae) MGI:106211 Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418; Mm.1022; Mm.426418 4 4 D3|4 66.75 cM CDC42 998 0 tctagcaccagtgttgtggctta cctgagactgggtttctctgtgt 2 1 4 1.1.1.2.4.1 BCBC-5A-0 14093198 P103485 Tmed2 ProximalPromoter P103485 ProximalPromoter Unique Tile chr5:124800298-124801210 (+) NM_019770 + 198 124801408 56334 Tmed2 1110032D12Rik|1810020N21Rik|MGC102446|Rnp24|Sid394 transmembrane emp24 domain trafficking protein 2 MGI:1929269 Mm.425279 5 5 F TMED2 10959 NM_021430 - 8289 124792009 75695 2900002H16Rik 1 agttcaaatcccagcaaccacat ccaatgatcacgtggactaggag 2 1 5 1.1.1.2.5.1 BCBC-5A-0 14093217 P104325 Hspa4 DistalPromoter P104325 DistalPromoter Unique Tile chr11:53144795-53146799 (-) NM_008300 - 983 53143812 15525 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|KIAA4025|mKIAA4025 heat shock protein 4 MGI:1342292 Mm.239865 11 11 B1.3|11 29.0 cM HSPA4 3308 NM_026479 + 21308 53168107 67966 Zcchc10 0 gagggcattagatttcgttacgg acagtgctagaacacttgcaggc 2 1 6 1.1.1.2.6.1 BCBC-5A-0 14093236 P104871 Mab21l2 DistalPromoter P104871 DistalPromoter Unique Tile chr3:86635131-86637125 (-) NM_011839 - 921 86634210 23937 Mab21l2 - mab-21-like 2 (C. elegans) MGI:1346022 Mm.389466 3 3 F1 MAB21L2 10586 0 ggagctgctgatggacttctaca caagagctggagaattgctgtgt 2 1 7 1.1.1.2.7.1 BCBC-5A-0 14093255 P107469 Pdlim3 DistalPromoter P107469 DistalPromoter Unique Tile chr8:47381240-47383338 (+) NM_016798 + 965 47384303 53318 Pdlim3 AI463105|ALP|Actn2lp PDZ and LIM domain 3 MGI:1859274 Mm.282900 8 8 B1.1 PDLIM3 27295 0 tgagatggctcagtgggttagag gcagaaggtcaccaaggagattt 2 1 8 1.1.1.2.8.1 BCBC-5A-0 14093274 P106333 Dnajb11 DistalPromoter P106333 DistalPromoter Unique Tile chr16:22770009-22772094 (+) NM_026400 + 1105 22773199 67838 Dnajb11 1810031F23Rik|ABBP-2|AL024055|Dj9 DnaJ (Hsp40) homolog, subfamily B, member 11 MGI:1915088 Mm.37516 16 16 B1 DNAJB11 51726 NM_013465 + 35281 22807375 11625 Ahsg 0 atcttgatcccccaatcaaaaga tggcaagtaagtggcaagcttta 2 1 9 1.1.1.2.9.1 BCBC-5A-0 14093293 P203681 Nudt3 ProximalPromoter P203681 ProximalPromoter Unique Tile chr17:27350892-27351943 (-) NM_019837 - 149 27351041 56409 Nudt3 1110011B09Rik|AA960325|Dipp nudix (nucleotide diphosphate linked moiety X)-type motif 3 MGI:1928484 Mm.144699 17 17 A3.3 NUDT3 11165 NM_025963 - 10864 27362807 67097 Rps10 0 attcagtctcctggtcctctgtg gagggtctgtgtgtccgctac 2 1 10 1.1.1.2.10.1 BCBC-5A-0 14093312 P202885 Gabrb3 ProximalPromoter P202885 ProximalPromoter Unique Tile chr7:57457188-57458214 (+) NM_008071;NM_001038701; + 183 57458397 14402 Gabrb3 A230092K12Rik|AW049585|Cp1|Gabrb-3 gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3 MGI:95621 Mm.8004 7 7 B5|7 28.6 cM GABRB3 2562 0 aaccagtagggaggaagacaagg ctctcctgcaaaaccaagtgagt 2 1 11 1.1.1.2.11.1 BCBC-5A-0 14093331 P202469 Fdft1 ProximalPromoter P202469 ProximalPromoter Unique Tile chr14:62131865-62132811 (-) NM_010191 - 38 62131903 14137 Fdft1 SQS|SS farnesyl diphosphate farnesyl transferase 1 MGI:102706 Mm.425927 14 14 D1|14 3.0 cM FDFT1 2222 NM_201610 - 14824 62147635 382913 Neil2 0 accagcaaccatcaactaccaat gtggcctagacacttgacgaact 2 1 12 1.1.1.2.12.1 BCBC-5A-0 14093350 P205167 Alox12b ProximalPromoter P205167 ProximalPromoter Unique Tile chr11:68972044-68972953 (+) NM_009659 + 313 68973266 11686 Alox12b Aloxe2|MGC130560|e-LOX2 arachidonate 12-lipoxygenase, 12R type MGI:1274782 Mm.340329 11 11 B3|11 37.0 cM ALOX12B 242 NM_011786 + 29472 68942572 23801 Aloxe3 0 cccaagtggtaaacagacactcc aaatcagaagtgacctgctttgg 2 1 13 1.1.1.2.13.1 BCBC-5A-0 14093369 P204464 Gna-rs1 ProximalPromoter P204464 ProximalPromoter Unique Tile chr17:35587343-35588274 (+) NM_008136 + 229 35588045 14670 Gna-rs1 - guanine nucleotide binding protein, related sequence 1 MGI:95764 Mm.335754; Mm.427145; Mm.335754; Mm.427145; Mm.335754; Mm.427145; Mm.335754; Mm.427145; Mm.335754; Mm.427145; Mm.335754; Mm.427145 17 17 C-D|17 19.72 cM GNL1 2794 NM_145487 - 15 35588289 75210 Prr3 0 cacactagctttccttccgctt agctgcttcttcttctgcttcac 2 1 14 1.1.1.2.14.1 BCBC-5A-0 14093388 P206867 Tex101 ProximalPromoter P206867 ProximalPromoter Unique Tile chr7:24380702-24381647 (-) NM_019981 - 99 24380801 56746 Tex101 1700008H15Rik|AI429076|TES101RP testis expressed gene 101 MGI:1930791 Mm.23385 7 7 A3 TEX101 83639 NM_133743 + 35373 24345329 72434 Lypd3 0 ttacttggaggaaggagaggagg tggggaataccggtctatttctt 2 1 15 1.1.1.2.15.1 BCBC-5A-0 14093407 P206946 Smarce1 ProximalPromoter P206946 ProximalPromoter Unique Tile chr11:99046712-99047700 (-) NM_020618 - 184 99046528 57376 Smarce1 2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 MGI:1927347 Mm.379086 11 11 D SMARCE1 6605 NM_172946 - 12370 99060070 268481 Krt222 2 aggataagggccaacaggtagtc gggtttcctcagaagtcttcca 2 1 16 1.1.1.2.16.1 BCBC-5A-0 14093426 P200403 Hmgb2 ProximalPromoter P200403 ProximalPromoter Unique Tile chr8:60402854-60403818 (+) NM_008252 + 199 60404017 97165 Hmgb2 C80539|HMG-2|Hmg2|MGC103184 high mobility group box 2 MGI:96157 Mm.279998 8 8 B2 HMGB2 3148 NM_021788 - 22855 60379999 60406 Sap30 2 aaaatatgcccccacacctaact tagagaggaatgtactgctcggc 2 1 17 1.1.1.2.17.1 BCBC-5A-0 14093445 P209511 Slc26a6 ProximalPromoter P209511 ProximalPromoter Unique Tile chr9:108711015-108712105 (+) NM_134420 + 164 108711941 171429 Slc26a6 B930010B04Rik|CFEX|Pat1 solute carrier family 26, member 6 MGI:2159728 Mm.45201 9 9 F2 SLC26A6 65010 NM_080437 + 27473 108683542 107934 Celsr3 2 aagcatacaattaggtccagcca gaggctataaccaggggagagaa 2 1 18 1.1.1.2.18.1 BCBC-5A-0 14093464 P208908 Usp26 ProximalPromoter P208908 ProximalPromoter Unique Tile chrX:48045675-48046707 (-) NM_031388 - 3295 48042380 83563 Usp26 - ubiquitin specific peptidase 26 MGI:1933247 Mm.242827 X X A5 USP26 83844 0 accatttctaacagctgcctgag gcactgtacactccaaaagctga 2 1 19 1.1.1.2.19.1 BCBC-5A-0 14093123 P100036 Rhoc ProximalPromoter P100036 ProximalPromoter Unique Tile chr3:104918881-104919829 (+) NM_007484 + 2717 104917112 11853 Rhoc AI324259|Arh9|Arhc ras homolog gene family, member C MGI:106028 Mm.262 3 3 F2.2 RHOC 389 NM_027982 + 9766 104909115 71887 Ppm1j 0 cacagccttcgcttcatctct aagagaagagggttcgccaag 2 2 1 1.1.1.2.1.2 BCBC-5A-0 14093142 P100786 Gda ProximalPromoter P100786 ProximalPromoter Unique Tile chr19:21539523-21540511 (-) NM_010266 - 148 21539671 14544 Gda AU015411|AW047581 guanine deaminase MGI:95678 Mm.45054 19 19 B|19 15.5 cM GDA 9615 0 aggaaacctgggatccacact caggtggagtggacgaaagtc 2 2 2 1.1.1.2.2.2 BCBC-5A-0 14093161 P101626 Sez6 ProximalPromoter P101626 ProximalPromoter Unique Tile chr11:77745922-77746892 (+) NM_021286 + 141 77747033 20370 Sez6 BSRP-C|D11Bhm177e|KIAA4158|mKIAA4158|sez-6 seizure related gene 6 MGI:104745 Mm.229330 11 11 B5|11 44.83 cM SEZ6 124925 NM_008952 - 35941 77709981 19193 Pipox 0 gggcctccttcttcctctaca ctcccgggtttgtagcttacc 2 2 3 1.1.1.2.3.2 BCBC-5A-0 14093180 P102759 ProximalPromoter P102759 ProximalPromoter No Hits Tile 2 cggaggcagtcaaaggtagagta gatttgggattaagcaagcctct 2 2 4 1.1.1.2.4.2 BCBC-5A-0 14093199 P103509 Zfp111 ProximalPromoter P103509 ProximalPromoter Unique Tile chr7:23912304-23913287 (-) NM_019940 - 39 23912343 56707 Zfp111 - zinc finger protein 111 MGI:1929114 Mm.333655 7 7 A3 NM_001029933 + 26184 23886120 232966 Zfp114 0 cttgcacgaagttgacacaaaac aggacctgagcaactgcttacac 2 2 5 1.1.1.2.5.2 BCBC-5A-0 14093218 P104439 Psmc1 DistalPromoter P104439 DistalPromoter Unique Tile chr12:100510292-100512447 (+) NM_008947 + 932 100513379 19179 Psmc1 AI325227|P26s4|S4 protease (prosome, macropain) 26S subunit, ATPase 1 MGI:106054 Mm.157105 12 12 E|12 41.0 cM PSMC1 5700 0 actcaaaatagccaggtccttcg agcaggtgttctttacccctgag 2 2 6 1.1.1.2.6.2 BCBC-5A-0 14093237 P104895 Zfp260 DistalPromoter P104895 DistalPromoter Unique Tile chr7:29809804-29811959 (+) NM_011981 + 1373 29813332 26466 Zfp260 AI480997|Ozrf1|PEX1|Zfp63 zinc finger protein 260 MGI:1347071 Mm.195092 7 7 B1 ZNF260 339324 NM_152814 - 10647 29799157 72556 Zfp566 0 atgctatccccagcaccaatact gcctgagtccaatgttagcttga 2 2 7 1.1.1.2.7.2 BCBC-5A-0 14093256 P107491 Rdh8 DistalPromoter P107491 DistalPromoter Unique Tile chr9:20566579-20568541 (-) NM_001030290 + 364 20568905 235033 Rdh8 Gm182|prRDH retinol dehydrogenase 8 MGI:2685028 Mm.297661 9 9 A3 RDH8 50700 NM_016919 - 1143 20565436 53867 Col5a3 1 ctcctggctatcctggaactgat tctgaagaccagacagaccttgg 2 2 8 1.1.1.2.8.2 BCBC-5A-0 14093275 P106355 Leprotl1 DistalPromoter P106355 DistalPromoter Unique Tile chr8:35616715-35618561 (-) NM_026609 - 1459 35615256 68192 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 MGI:1915442 Mm.34212 8 8 A4 LEPROTL1 23484 NM_026432 + 4540 35623101 67887 Tmem66 0 tacccccatctctgtggcttaat tacacagactgaaagggagtcgc 2 2 9 1.1.1.2.9.2 BCBC-5A-0 14093294 P203614 Evi2a ProximalPromoter P203614 ProximalPromoter Unique Tile chr11:79346872-79347864 (-) NM_001033711;NM_010161; - 68 79346804 14017 Evi2a AW491894|Evi-2|Evi2 ecotropic viral integration site 2a MGI:95458 Mm.164948 11 11 B5|11 46.13 cM EVI2A 2123 NM_146023 - 118 79346754 216984 Evi2b 0 caggctgctctttattgaaggaa cttttctctcccacctatggctt 2 2 10 1.1.1.2.10.2 BCBC-5A-0 14093313 P202909 Kif20a ProximalPromoter P202909 ProximalPromoter Unique Tile chr18:34749000-34749962 (+) NM_009004 + 129 34749833 19348 Kif20a AA415432|Rab6kifl kinesin family member 20A MGI:1201682 Mm.258846 18 18 B1|18 17.0 cM KIF20A 10112 NM_030147 - 351 34749611 78656 Brd8 0 gcaggaaaagcctacagctaaca ccaaagaccacgagacctagaga 2 2 11 1.1.1.2.11.2 BCBC-5A-0 14093332 P202493 Acpp ProximalPromoter P202493 ProximalPromoter Unique Tile chr9:104196176-104197082 (-) NM_019807;NM_207668; - 109 104196067 56318 Acpp A030005E02Rik|AI324033|Lap|PAP|Ppal acid phosphatase, prostate MGI:1928480 Mm.19941 9 9 F1 ACPP 55 0 ggagactgccagaatgagaaaaa cgtctgtgagtttcttcagagca 2 2 12 1.1.1.2.12.2 BCBC-5A-0 14093351 P205191 Rnd2 ProximalPromoter P205191 ProximalPromoter Unique Tile chr11:101283021-101284091 (+) NM_009708 + 336 101284427 11858 Rnd2 Arhn|Rohn Rho family GTPase 2 MGI:1338755 Mm.378883 11 11 C-D RND2 8153 NM_012037 - 732 101282289 26949 Vat1 1 tggaattgaggatagaacccaga gtttatttgagttcctcgggcat 2 2 13 1.1.1.2.13.2 BCBC-5A-0 14093370 P204771 Pctp ProximalPromoter P204771 ProximalPromoter Unique Tile chr11:89819201-89820148 (-) NM_008796 - 246 89818955 18559 Pctp PC-TP phosphatidylcholine transfer protein MGI:107375 Mm.5062 11 11 C|11 52.0 cM PCTP 58488 NM_026433 + 26289 89846437 67888 Tmem100 0 gatgagtgtgagtggattgcttg gaaagaaggaagggctgaagaag 2 2 14 1.1.1.2.14.2 BCBC-5A-0 14093389 P206892 Ankrd2 ProximalPromoter P206892 ProximalPromoter Unique Tile chr19:42088264-42089273 (+) NM_020033 + 75 42089348 56642 Ankrd2 Arpp|mArpp ankyrin repeat domain 2 (stretch responsive muscle) MGI:1861447 Mm.143737 19 19 D1 ANKRD2 26287 NM_026152 + 9888 42099161 67432 0610010D20Rik 0 ataggaaaagtgaaggagcaccc gtcattagctcacaggctcgttt 2 2 15 1.1.1.2.15.2 BCBC-5A-0 14093408 P206971 Piwil2 ProximalPromoter P206971 ProximalPromoter Unique Tile chr14:69164183-69165175 (-) NM_021308 - 9 69164174 57746 Piwil2 Piwil1l|mili piwi-like homolog 2 (Drosophila) MGI:1930036 Mm.85253 14 14 D2 PIWIL2 55124 NM_025945 - 13352 69178527 67065 Polr3d 2 tggaatggtagtcctgggttcta aataacgaattccagtccaccct 2 2 16 1.1.1.2.16.2 BCBC-5A-0 14093427 P200427 Mns1 ProximalPromoter P200427 ProximalPromoter Unique Tile chr9:72236063-72237055 (+) NM_008613 + 46 72237101 17427 Mns1 AW546487 meiosis-specific nuclear structural protein 1 MGI:107933 Mm.387671 9 9 D MNS1 55329 0 tgggggtgtaggatggtaatatg atatccaatcagcacggagagtc 2 2 17 1.1.1.2.17.2 BCBC-5A-0 14093446 P209445 Cbll1 ProximalPromoter P209445 ProximalPromoter Unique Tile chr12:32085483-32086391 (-) NM_134048 - 21 32085504 104836 Cbll1 AI467391|Hakai|c-Cbl-like Casitas B-lineage lymphoma-like 1 MGI:2144842 Mm.273270 12 12 A3 CBLL1 79872 0 aagaactggaactaggtaccgcc ttaccagtgtgatccatgattcg 2 2 18 1.1.1.2.18.2 BCBC-5A-0 14093465 P208933 Plvap ProximalPromoter P208933 ProximalPromoter Unique Tile chr8:74440874-74441847 (-) NM_032398 - 141 74440733 84094 Plvap MECA32|PV-1 plasmalemma vesicle associated protein MGI:1890497 Mm.260768 8 8 B3.3|8 33.5 cM PLVAP 83483 NM_032544 + 23783 74417091 70359 Gtpbp3 0 acaaagcttactgccacttcctg aggctgttgaggaactgactgac 2 2 19 1.1.1.2.19.2 BCBC-5A-0 14093124 P100060 Btg2 ProximalPromoter P100060 ProximalPromoter Unique Tile chr1:135896106-135897122 (-) NM_007570 - 540 135895566 12227 Btg2 AA959598|APRO1|Pc3|TIS21 B-cell translocation gene 2, anti-proliferative MGI:108384 Mm.239605 1 1 E4|1 71.0 cM BTG2 7832 NM_027979 + 30530 135927652 71884 Chit1 0 ctgacagtgacgaaagggacc ctcactgtttggtgggaggag 2 3 1 1.1.1.2.1.3 BCBC-5A-0 14093143 P100810 Gusb ProximalPromoter P100810 ProximalPromoter Unique Tile chr5:130288078-130289135 (-) NM_010368 - 526 130287552 110006 Gusb AI747421|Gur|Gus|Gus-r|Gus-s|Gus-t|Gus-u|Gut|asd|g glucuronidase, beta MGI:95872 Mm.3317 5 5 G1.3 GUSB 2990 NM_133768 - 19899 130309034 109900 Asl 0 tgcctgtggaggctagaagag tcacaaatgaaggttgcgatg 2 3 2 1.1.1.2.2.3 BCBC-5A-0 14093162 P101932 Grtp1 ProximalPromoter P101932 ProximalPromoter Unique Tile chr8:13201055-13202131 (-) NM_025768 - 454 13200601 66790 Grtp1 5430401C05Rik|C81211|Tbc1d6 GH regulated TBC protein 1 MGI:1914040 Mm.34901 8 8 A1.1 GRTP1 79774 NM_010684 + 41797 13159258 16783 Lamp1 0 tgggagctagaatttggggtt ccttaccatctctcctcgcct 2 3 3 1.1.1.2.3.3 BCBC-5A-0 14093181 P102783 Dgcr2 ProximalPromoter P102783 ProximalPromoter Unique Tile chr16:17805581-17806604 (-) NM_010048 - 349 17805232 13356 Dgcr2 9930034O06Rik|DGS-C|Dgsc|Idd|Lan|Sez12|mKIAA0163 DiGeorge syndrome critical region gene 2 MGI:892866 Mm.254515 16 16 A-B1|16 10.37 cM DGCR2 9993 NM_009435 + 1188 17807792 22114 Tssk1 0 ggccgacttcaggttctttatct gaggtatagctggacctgaacga 2 3 4 1.1.1.2.4.3 BCBC-5A-0 14093200 P103533 Bcam ProximalPromoter P103533 ProximalPromoter Unique Tile chr7:18929432-18930377 (-) NM_020486 - 394 18929038 57278 Bcam 1200005K12Rik|B-CAM|Gplu|Lu basal cell adhesion molecule MGI:1929940 Mm.29236 7 7 A3 BCAM 4059 NM_008990 - 21385 18908047 19294 Pvrl2 2 gaagaaagacttcctggagaggg cttctgcctcagtttcccaagta 2 3 5 1.1.1.2.5.3 BCBC-5A-0 14093219 P104463 Rpl12 DistalPromoter P104463 DistalPromoter Unique Tile chr2:32780033-32782007 (+) NM_009076 + 1727 32783734 269261 Rpl12 E430018F03|MGC102182|MGC102573 ribosomal protein L12 MGI:98002 Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297; Mm.250030; Mm.381297 2 2 B RPL12 6136 NM_199302 - 1253 32783260 227738 Lrsam1 0 catttcattggtggagctacctg tccagagctggaagtgactcatc 2 3 6 1.1.1.2.6.3 BCBC-5A-0 14093238 P104829 Hsp90b1 DistalPromoter P104829 DistalPromoter Unique Tile chr10:86136603-86138696 (-) NM_011631 - 1354 86135249 22027 Hsp90b1 ERp99|GRP94|Tra-1|Tra1|gp96 heat shock protein 90kDa beta (Grp94), member 1 MGI:98817 Mm.87773 10 10 C1|10 49.0 cM HSP90B1 7184 NM_001003910;NM_153595;NM_001003939; + 993 86135610 103220 Gnn 0 atcaaggtcaagaatgtccccat tgcctctaacacatccattccat 2 3 7 1.1.1.2.7.3 BCBC-5A-0 14093257 P105757 Syk DistalPromoter P105757 DistalPromoter Unique Tile chr13:52592588-52594701 (+) NM_011518 + 1231 52595932 20963 Syk - spleen tyrosine kinase MGI:99515 Mm.375031 13 13 B-C2|13 37.0 cM SYK 6850 NM_001024474 - 49502 52543086 68203 Diras2 0 tgtgtaatgtggtgctcctgaga acagggatggagagatggcttag 2 3 8 1.1.1.2.8.3 BCBC-5A-0 14093276 P106376 F11 DistalPromoter P106376 DistalPromoter Unique Tile chr8:46762041-46763968 (-) NM_028066 - 1193 46760848 109821 F11 1600027G01Rik|AI503996|Cf11|FXI coagulation factor XI MGI:99481 Mm.33326 8 8 B1.1|8 25.0 cM F11 2160 NM_008455 - 29610 46793578 16621 Klkb1 0 cctttctacctgcaactcccagt gtaagagggacaacaacctgcct 2 3 9 1.1.1.2.9.3 BCBC-5A-0 14093295 P203639 Ctla4 ProximalPromoter P203639 ProximalPromoter Unique Tile chr1:60852224-60853300 (+) NM_009843 + 270 60853570 12477 Ctla4 Cd152|Ctla-4|Ly-56 cytotoxic T-lymphocyte-associated protein 4 MGI:88556 Mm.390 1 1 C|1 30.1 cM CTLA4 1493 0 ccgactctacagagcctcttctg tggtcatctttaatcccccagta 2 3 10 1.1.1.2.10.3 BCBC-5A-0 14093314 P202253 5730596B20Rik ProximalPromoter P202253 ProximalPromoter Unique Tile chr6:52106267-52107273 (+) NM_175261 + 193 52107080 77580 5730596B20Rik - RIKEN cDNA 5730596B20 gene MGI:1924830 Mm.348030 6 6 B3 NM_010451 - 11853 52094414 15399 Hoxa2 0 tccgggatatttcaccctctaat cagccttttggatttcagatgag 2 3 11 1.1.1.2.11.3 BCBC-5A-0 14093333 P202517 Ralgps1 ProximalPromoter P202517 ProximalPromoter Unique Tile chr2:33193740-33194701 (-) NM_175211 - 253 33193487 241308 Ralgps1 5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|mKIAA0351 Ral GEF with PH domain and SH3 binding motif 1 MGI:1922008 Mm.274249 2 2 B RALGPS1 9649 0 attttcttatgcgtgtcctgagc caccccctgcctagaaatagact 2 3 12 1.1.1.2.12.3 BCBC-5A-0 14093352 P205215 Bnip3l ProximalPromoter P205215 ProximalPromoter Unique Tile chr14:65962889-65963903 (-) NM_009761 - 45 65962934 12177 Bnip3l C86132|D14Ertd719e|Nip3L|Nix BCL2/adenovirus E1B interacting protein 3-like MGI:1332659 Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081; Mm.29820; Mm.347081 14 14 D1|14 28.0 cM BNIP3L 665 2 catctcactggctggtcctagat agacatggtctggagactggaag 2 3 13 1.1.1.2.13.3 BCBC-5A-0 14093371 P204796 Csh1 ProximalPromoter P204796 ProximalPromoter Inter Repeats Tile chr13:27100703-27101685 (+) NM_008864 + 15 27101670 18775 Csh1 AI325057|MGC76481|PL-I|PL-I-alpha|PL-Ia|Pl-1|Pl1 chorionic somatomammotropin hormone 1 MGI:97606 Mm.233151 13 13 A3.1|13 14.0 cM NM_172155 + 27483 27129168 215028 Plib 0 ctcctggtttggttgattctttg agtgaggaaatctgcttcacctg 2 3 14 1.1.1.2.14.3 BCBC-5A-0 14093390 P206825 Sult1b1 ProximalPromoter P206825 ProximalPromoter Unique Tile chr5:88612874-88613809 (-) NM_019878 - 118 88612756 56362 Sult1b1 - sulfotransferase family 1B, member 1 MGI:2136282 Mm.23502 5 5 E1 SULT1B1 27284 NM_016771 - 29711 88643520 53315 Sult1d1 2 aagagcacttttctgtgggagtg aggtcagagtgacaactggaagg 2 3 15 1.1.1.2.15.3 BCBC-5A-0 14093409 P206995 Clec5a ProximalPromoter P206995 ProximalPromoter Unique Tile chr6:40515696-40516675 (-) NM_021364;NM_001038604; - 284 40515412 23845 Clec5a Clecsf5|Ly100|MDL-1|MGC129446|MGC129447|Mdl1 C-type lectin domain family 5, member a MGI:1345151 Mm.103765 6 6 B2 CLEC5A 23601 NM_146383 + 14702 40500994 258381 Olfr460 0 tatctctgttcctggtaggctgc ggtggttctgtacctctcattgg 2 3 16 1.1.1.2.16.3 BCBC-5A-0 14093428 P200452 D130059P03Rik ProximalPromoter P200452 ProximalPromoter Unique Tile chr6:38362457-38363473 (+) NM_177185 + 84 38363557 320538 D130059P03Rik 2900060J04Rik|6030408G03Rik|BC060116|mKIAA2030 RIKEN cDNA D130059P03 gene MGI:2444236 Mm.302831 6 6 B1 FLJ25778 254048 2 ctgacctgcagttgtctatgtgg ctcagttttccccttttcctctc 2 3 17 1.1.1.2.17.3 BCBC-5A-0 14093447 P209469 Rcbtb2 ProximalPromoter P209469 ProximalPromoter Unique Tile chr14:71875348-71876280 (+) NM_134083 + 62 71876342 105670 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 MGI:1917200 Mm.280068 14 14 D2 RCBTB2 1102 0 tggctaaccaaaacatgcctact taggaggagcaagctcagaaaga 2 3 18 1.1.1.2.18.3 BCBC-5A-0 14093466 P207596 Cmpk ProximalPromoter P207596 ProximalPromoter Unique Tile chr4:114485249-114486209 (-) NM_025647 - 171 114485078 66588 Cmpk 0610011D08Rik|UMP-CMPk cytidylate kinase MGI:1913838 Mm.294159; Mm.426645; Mm.294159; Mm.426645; Mm.294159; Mm.426645; Mm.294159; Mm.426645; Mm.294159; Mm.426645; Mm.294159; Mm.426645; Mm.294159; Mm.426645; Mm.294159; Mm.426645; Mm.294159; Mm.426645; Mm.294159; Mm.426645; Mm.294159; Mm.426645; Mm.294159; Mm.426645 4 4 C7 CMPK 51727 NM_009185 + 11922 114498131 20460 Stil 0 caaacccaaaggctaagaatgtg ccaaggcatttcagtttcagaac 2 3 19 1.1.1.2.19.3 BCBC-5A-0 14093125 P100084 Ccnb1 ProximalPromoter P100084 ProximalPromoter Unique Tile chr13:101887342-101888289 (-) NM_172301 - 599 101886743 268697 Ccnb1 Ccnb1-rs13|Cycb-4|MGC18763|MGC90915 cyclin B1 MGI:88302 Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027; Mm.260114; Mm.380027 13 13 D1 CCNB1 891 NM_021886 - 11186 101876156 26886 Cenph 1 aacctcaacaatgaggaggca tataggcctggctgtcctgaa 2 4 1 1.1.1.2.1.4 BCBC-5A-0 14093144 P100834 Iapp ProximalPromoter P100834 ProximalPromoter Unique Tile chr6:142254387-142255481 (+) NM_010491 + 168 142255649 15874 Iapp amylin islet amyloid polypeptide MGI:96382 Mm.415 6 6 G2|6 62.0 cM IAPP 3375 NM_130861 - 18329 142236058 108096 Slco1a5 0 gaatgtggagcaatgggagag actgagtgcctttgtgtgggt 2 4 2 1.1.1.2.2.4 BCBC-5A-0 14093163 P101956 1700022L09Rik ProximalPromoter P101956 ProximalPromoter Unique Tile chr2:156698389-156699231 (-) NM_025853 - 88 156698477 66934 1700022L09Rik AW552447 RIKEN cDNA 1700022L09 gene MGI:1914184 Mm.25410 2 2 H1 C20orf172 79980 NM_013865 - 14918 156683471 29812 Ndrg3 1 attaaaggcatgcaccaccac ttcctgaaccagtaagcccaa 2 4 3 1.1.1.2.3.4 BCBC-5A-0 14093182 P102717 C4b ProximalPromoter P102717 ProximalPromoter Unique Tile chr17:34352106-34353055 (-) NM_009780 - 167 34351939 12268 C4b C4|Ss complement component 4B (Childo blood group) MGI:88228 Mm.18845 17 17 B1|17 18.8 cM C4B 721 0 gctggtggactggtgagtctagt tctggtgcttgtttattcccagt 2 4 4 1.1.1.2.4.4 BCBC-5A-0 14093201 P103557 Cyp2e1 ProximalPromoter P103557 ProximalPromoter Unique Tile chr7:140613758-140614701 (+) NM_021282 + 450 140615151 13106 Cyp2e1 Cyp2e cytochrome P450, family 2, subfamily e, polypeptide 1 MGI:88607 Mm.21758 7 7 F5|7 68.4 cM CYP2E1 1571 0 ctactcttctccaaagggcaaca taacttctgatctggcaccacaa 2 4 5 1.1.1.2.5.4 BCBC-5A-0 14093220 P104487 Sema3a DistalPromoter P104487 DistalPromoter Unique Tile chr5:13402983-13404966 (+) NM_009152 + 348 13405314 20346 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A MGI:107558 Mm.372039 5 5 A1 SEMA3A 10371 1 ccacaggttctttgagtgaatgg ggttttaaagccccctcagagat 2 4 6 1.1.1.2.6.4 BCBC-5A-0 14093239 P104853 Ercc5 DistalPromoter P104853 DistalPromoter Unique Tile chr1:44089189-44091167 (+) NM_011729 + 1225 44092392 22592 Ercc5 Xpg excision repair cross-complementing rodent repair deficiency, complementation group 5 MGI:103582 Mm.2213 1 1 B|1 26.6 cM ERCC5 2073 NM_144558 + 24637 44064552 246229 Bivm 0 cggaacaatgtgaaaagccaata tcaagtctcaggtctgatgctcc 2 4 7 1.1.1.2.7.4 BCBC-5A-0 14093258 P105399 Ier3ip1 DistalPromoter P105399 DistalPromoter Unique Tile chr18:77131061-77133204 (+) NM_025409 + 1286 77134490 66191 Ier3ip1 1110057H19Rik|AI644142|AL022842|AL022863|AV026606 immediate early response 3 interacting protein 1 MGI:1913441 Mm.28593 18 18 E3 IER3IP1 51124 NM_029826;NM_001039202;NM_001039201; + 15360 77148564 76987 Hdhd2 0 aactgatggaggggagtcttgtc atgctatacatgttccactgccg 2 4 8 1.1.1.2.8.4 BCBC-5A-0 14093277 P106398 Rabep2 DistalPromoter P106398 DistalPromoter Unique Tile chr7:126217882-126219747 (+) NM_030566 + 159 126219906 70314 Rabep2 2610011A08Rik|AI462746|Fra|MGC8300 rabaptin, RAB GTPase binding effector protein 2 MGI:1917564 Mm.35467 7 7 F3 RABEP2 79874 NM_009844 - 11898 126205984 12478 Cd19 0 gctgagagcttggagtagggttc atggcttcctgcaaatctctttc 2 4 9 1.1.1.2.9.4 BCBC-5A-0 14093296 P203663 Stam ProximalPromoter P203663 ProximalPromoter Unique Tile chr2:13990815-13991735 (+) NM_011484 + 130 13991865 20844 Stam STAM1 signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 MGI:1329014 Mm.273174 2 2 A2-B STAM 8027 NM_013935;NM_001012396; - 17026 13973789 30963 Ptpla 0 gtttgctcctcttcctccaaaat tgtctcttcctctgctgagttcc 2 4 10 1.1.1.2.10.4 BCBC-5A-0 14093315 P202277 Dll4 ProximalPromoter P202277 ProximalPromoter Unique Tile chr2:119016197-119017194 (+) NM_019454 + 70 119017264 54485 Dll4 Delta4 delta-like 4 (Drosophila) MGI:1859388 Mm.143719 2 2 E3 DLL4 54567 NM_026929 + 25504 119042698 69065 Chac1 2 actcaaacaactctatgcgcctc agacagactcacggtcactctcc 2 4 11 1.1.1.2.11.4 BCBC-5A-0 14093334 P202451 Nags ProximalPromoter P202451 ProximalPromoter Unique Tile chr11:101961293-101962298 (+) NM_145829;NM_178053; + 157 101962455 217214 Nags 1700120E20Rik|AI415708|argA N-acetylglutamate synthase MGI:2387600 Mm.31686 11 11 D NAGS 162417 NM_029649 - 10153 101972451 76547 Tmem101 0 aactttcccagactccttccaac aggcctttgtcagacatcacttc 2 4 12 1.1.1.2.12.4 BCBC-5A-0 14093353 P205239 Casq1 ProximalPromoter P205239 ProximalPromoter Unique Tile chr1:174056363-174057268 (-) NM_009813 - 145 174056508 12372 Casq1 CSQ|CSQ-1|CSQ1 calsequestrin 1 MGI:1309468 Mm.12829 1 1 H3|1 94.0 cM CASQ1 844 NM_011063 - 12907 174043456 18611 Pea15 2 gcaaaggaaactgactggagcta catggaggtagtacaatctgggc 2 4 13 1.1.1.2.13.4 BCBC-5A-0 14093372 P204820 RP23-136K12.4 ProximalPromoter P204820 ProximalPromoter Unique Tile chr11:75446402-75447362 (+) NM_008916 + 148 75447214 19062 RP23-136K12.4 C62|Pps putative phosphatase MGI:1194899 Mm.1458 11 11 B5|11 44.12 cM SKIP 51763 NM_008659 + 20410 75467772 17913 Myo1c 0 actgtaaaaacaaccccatgcac ctccttagactcacagccgacat 2 4 14 1.1.1.2.14.4 BCBC-5A-0 14093391 P206849 Clcf1 ProximalPromoter P206849 ProximalPromoter Unique Tile chr19:4213199-4214288 (+) NM_019952 + 103 4214391 56708 Clcf1 Bsf3|CLC|MGC129162|MGC129163 cardiotrophin-like cytokine factor 1 MGI:1930088 Mm.347919 19 19 A CLCF1 23529 NM_011237 - 11596 4201603 19367 Rad9 1 aatgactgtcccccaagaaaaat taaccacaaattgtagcagccct 2 4 15 1.1.1.2.15.4 BCBC-5A-0 14093410 P201082 Ncl ProximalPromoter P201082 ProximalPromoter Unique Tile chr1:88190527-88191476 (-) NM_010880 - 81 88190446 17975 Ncl B530004O11Rik|C23|D0Nds28|D1Nds28|Nucl nucleolin MGI:97286 Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110; Mm.154378; Mm.428110 1 1 D|1 48.4 cM NCL 4691 NM_010341 - 27836 88219312 14767 Nmur1 2 gatacaggtcgaggctaacatgg ctagcgtctgaggcaaaagactg 2 4 16 1.1.1.2.16.4 BCBC-5A-0 14093429 P200476 Sema3b ProximalPromoter P200476 ProximalPromoter Unique Tile chr9:107463821-107464729 (-) NM_009153 - 318 107463503 20347 Sema3b AW208495|LUCA-1|SemA|Semaa|sema5|semaV sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B MGI:107561 Mm.4083 9 9 F1|9 60.3 cM SEMA3B 7869 NM_025903 + 17948 107445873 15983 Ifrd2 0 cctgtcagagttcttggtggagt tatttctgagggtccctttgtga 2 4 17 1.1.1.2.17.4 BCBC-5A-0 14093448 P209493 Wdr74 ProximalPromoter P209493 ProximalPromoter Unique Tile chr19:8801865-8802825 (+) NM_134139 + 58 8802883 107071 Wdr74 5730436H21Rik|AA407588 WD repeat domain 74 MGI:2147427 Mm.29627 19 19 A WDR74 54663 NM_019829 + 5710 8808535 56389 Stx5a 0 catcctcttatgctacacctggg gattcagtctgacaactcgggtc 2 4 18 1.1.1.2.18.4 BCBC-5A-0 14093467 P207620 Ccdc72 ProximalPromoter P207620 ProximalPromoter Unique Tile chr9:108938725-108939734 (+) NM_183250 - 1034 108939759 66167 Ccdc72 1110017O22Rik|MGC117874 coiled-coil domain containing 72 MGI:1913417 Mm.2395; Mm.379103; Mm.392366; Mm.2395; Mm.379103; Mm.392366; Mm.2395; Mm.379103; Mm.392366; Mm.2395; Mm.379103; Mm.392366; Mm.2395; Mm.379103; Mm.392366; Mm.2395; Mm.379103; Mm.392366; Mm.2395; Mm.379103; Mm.392366; Mm.2395; Mm.379103; Mm.392366; Mm.2395; Mm.379103; Mm.392366; Mm.2395; Mm.379103; Mm.392366; Mm.2395; Mm.379103; Mm.392366 9 9 F2 CCDC72 51372 NM_025689 + 7005 108946739 66658 Ccdc51 0 aggagacctttgtctggtcttcc aggtaaggctatttggagatcgg 2 4 19 1.1.1.2.19.4 BCBC-5A-0 14093126 P100018 Ambp ProximalPromoter P100018 ProximalPromoter Unique Tile chr4:62640874-62641863 (-) NM_007443 - 363 62640511 11699 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin MGI:88002 Mm.2197 4 4 C1-C3|4 30.6 cM AMBP 259 NM_010616 - 16544 62658407 16552 Kif12 1 gaacccctggaggagagagaa tccttcctcccaagactctcc 2 5 1 1.1.1.2.1.5 BCBC-5A-0 14093145 P100858 Klk1b4 ProximalPromoter P100858 ProximalPromoter Inter Repeats Tile chr7:44073854-44074885 (+) NM_010915 + 591 44075476 18048 Klk1b4 Ngfa|mGk-4 kallikrein 1-related pepidase b4 MGI:97320 Mm.142722 7 7 B3|7 23.02 cM NM_008693 + 7583 44066271 18050 Klk1b3 2 aagctgtttgcagctcacctc accagcactttgaagccagag 2 5 2 1.1.1.2.2.5 BCBC-5A-0 14093164 P101980 Trappc6a ProximalPromoter P101980 ProximalPromoter Unique Tile chr7:18666394-18667403 (+) NM_025960 + 156 18667247 67091 Trappc6a 1810073E21Rik|4930519D19Rik|AI480686|MGC117907 trafficking protein particle complex 6A MGI:1914341 Mm.44213 7 7 A3 TRAPPC6A 79090 NM_177692 - 459 18666853 232946 Bloc1s3 0 atggtggaagaagcgaactga ctcgatcacaccccacttctc 2 5 3 1.1.1.2.3.5 BCBC-5A-0 14093183 P102741 Cdyl ProximalPromoter P102741 ProximalPromoter Unique Tile chr13:35666587-35667515 (+) NM_009881 + 138 35667377 12593 Cdyl AI325931 chromodomain protein, Y chromosome-like MGI:1339956 Mm.29002 13 13 A3.3|13 17.0 cM CDYL 9425 0 tataggagccaactacctgctgc cgttgtaggagctctgaagggta 2 5 4 1.1.1.2.4.5 BCBC-5A-0 14093202 P103863 Ubl4b ProximalPromoter P103863 ProximalPromoter Unique Tile chr3:107683498-107684491 (-) NM_026261 - 369 107683129 67591 Ubl4b 4930522D07Rik ubiquitin-like 4B MGI:1914841 Mm.55982 3 3 F3 UBL4B 164153 NM_172271 - 37424 107646074 229706 Slc6a17 0 agtgttcaaatgaggaagcaagc atccacacatcctacaaggtgct 2 5 5 1.1.1.2.5.5 BCBC-5A-0 14093221 P104511 Serpinb6a DistalPromoter P104511 DistalPromoter Unique Tile chr13:33944768-33946930 (-) NM_009254 - 1307 33943461 20719 Serpinb6a AI876477|Serpinb6|Spi3|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6a MGI:103123 Mm.252210 13 13 A3.3|13 13.7 cM SERPINB6 5269 NM_020282 + 25285 33972215 18105 Nqo2 0 agcagaaagcccaggagtctcta ggcagaattcccagaaggagata 2 5 6 1.1.1.2.6.5 BCBC-5A-0 14093240 P104877 Mrps12 DistalPromoter P104877 DistalPromoter Unique Tile chr7:28451781-28453597 (-) NM_011885 - 1235 28450546 24030 Mrps12 AI327385|Rpms12|rps12 mitochondrial ribosomal protein S12 MGI:1346333 Mm.358650 7 7 B1 MRPS12 6183 NM_023637 + 1026 28450755 71984 Sars2 0 taagaagccaggtgctctcctct tttaagctctcaaagcccacctc 2 5 7 1.1.1.2.7.5 BCBC-5A-0 14093259 P105423 2310010I16Rik DistalPromoter P105423 DistalPromoter Unique Tile chr3:10346275-10348261 (+) NM_025519 + 1243 10349504 66371 2310010I16Rik 2010012P02Rik|2210015K02Rik|MGC144772|MGC144773|Shax3 RIKEN cDNA 2310010I16 gene Mm.366147 3 3 A1 NM_025512 - 12430 10333845 66361 Zfand1 0 atctgcaggagaaatcagggttc tgcacgtttctacgcttacttcc 2 5 8 1.1.1.2.8.5 BCBC-5A-0 14093278 P106342 Dcxr DistalPromoter P106342 DistalPromoter Unique Tile chr11:120545001-120546800 (-) NM_026428 - 1631 120543370 67880 Dcxr 0610038K04Rik|1810027P18Rik dicarbonyl L-xylulose reductase MGI:1915130 Mm.231091 11 11 E2 DCXR 51181 NM_007621 - 1271 120548071 12409 Cbr2 0 ggtcgctgaagacaaggtgtaga ggccaatataaccaagcacatga 2 5 9 1.1.1.2.9.5 BCBC-5A-0 14093297 P203687 4930572J05Rik ProximalPromoter P203687 ProximalPromoter Unique Tile chr15:74547351-74548348 (+) NM_198607 + 140 74548488 223626 4930572J05Rik MGC54796 RIKEN cDNA 4930572J05 gene MGI:1925301 Mm.268603 15 15 E1 C8orf55 51337 NM_028216 + 5258 74542093 72373 Psca 0 agagacagggtggacagtaggtg ctagtctgggtcctctgcgttag 2 5 10 1.1.1.2.10.5 BCBC-5A-0 14093316 P202301 Pkhd1 ProximalPromoter P202301 ProximalPromoter Unique Tile chr1:20603312-20604372 (-) NM_153179 - 104 20603208 241035 Pkhd1 AI118496|AI182499|FPC|Tigm1 polycystic kidney and hepatic disease 1 MGI:2155808 Mm.249253 1 1 A2-A5 PKHD1 5314 0 aagcatctcaagagttgaccctg aagggctgcttacatttttctcc 2 5 11 1.1.1.2.11.5 BCBC-5A-0 14093335 P202475 D930018N13 ProximalPromoter P202475 ProximalPromoter Unique Tile chr7:99795479-99796392 (-) NM_183313 - 11483 99806962 330602 D930018N13 - hypothetical protein D930018N13 7 7 E2 0 tctgattacaaactggccactga tctaaagaggactgtacggctgg 2 5 12 1.1.1.2.12.5 BCBC-5A-0 14093354 P203216 Exosc4 ProximalPromoter P203216 ProximalPromoter Unique Tile chr15:76153613-76154710 (+) NM_175399 + 4 76154706 109075 Exosc4 1110039I09Rik|1500001N04Rik|Rrp41 exosome component 4 MGI:1923576 Mm.322752 15 15 D3 EXOSC4 54512 NM_010331 + 3838 76158548 14731 Gpaa1 0 actctcctaataaggcccacctg tggaccttcaggactacgacttc 2 5 13 1.1.1.2.13.5 BCBC-5A-0 14093373 P204844 Pter ProximalPromoter P204844 ProximalPromoter Unique Tile chr2:12841094-12842061 (+) NM_008961 + 76 12841985 19212 Pter AI790318|Mpr56-1 phosphotriesterase related MGI:107372 Mm.288713 2 2 A1 PTER 9317 0 ctgccttcataagccattgattc aagtcctcacctttcctaccagg 2 5 14 1.1.1.2.14.5 BCBC-5A-0 14093392 P206874 Prlpm ProximalPromoter P206874 ProximalPromoter Unique Tile chr13:27808255-27809268 (+) NM_019991 + 145 27809123 56635 Prlpm PLP-M prolactin-like protein M MGI:1861446 Mm.23585 13 13 A3.1|13 14.0 cM NM_026206 - 19986 27788269 67505 Prlpo 0 ttgccaagtcaagcaaagatgta atccagccttgtaaagcaattca 2 5 15 1.1.1.2.15.5 BCBC-5A-0 14093411 P201106 Pstpip2 ProximalPromoter P201106 ProximalPromoter Unique Tile chr18:77992962-77993870 (+) NM_013831 + 4774 77998644 19201 Pstpip2 MAYP|cmo proline-serine-threonine phosphatase-interacting protein 2 MGI:1335088 Mm.57174 18 18 E3|18 45.0 cM PSTPIP2 9050 NM_001033812 - 6946 78000816 619308 F830208F22Rik 0 gtgaacagcaggtctgtcttcct tggagcgcaactattaccatttt 2 5 16 1.1.1.2.16.5 BCBC-5A-0 14093430 P200409 Lims2 ProximalPromoter P200409 ProximalPromoter Unique Tile chr18:32044831-32045760 (+) NM_144862 + 28767 32074527 225341 Lims2 PINCH2 LIM and senescent cell antigen like domains 2 MGI:2385067 Mm.24551 18 18 B1 LIMS2 55679 NM_001025381 - 46886 32092646 574402 Gpr17 2 tcaacaaggccacacctcttaat ccagaaaagacagaacctggaga 2 5 17 1.1.1.2.17.5 BCBC-5A-0 14093449 P209518 H1foo ProximalPromoter P209518 ProximalPromoter Unique Tile chr6:115909487-115910538 (+) NM_138311 + 19 115910557 171506 H1foo C86609|H1fo|H1oo H1 histone family, member O, oocyte-specific MGI:2176207 Mm.21899 6 6 E3 H1FOO 132243 NM_145383 + 11942 115897545 212541 Rho 0 gctccataaaatgttgagttgcc tgccttaaatacctcccaacaga 2 5 18 1.1.1.2.18.5 BCBC-5A-0 14093468 P207644 ProximalPromoter P207644 ProximalPromoter Unique Tile chr4:116873224-116874124 (-) 0 ctgccttcttctggggaagttat caggtgacaagagggaacatacc 2 5 19 1.1.1.2.19.5 BCBC-5A-0 14093127 P100042 Atp5a1 ProximalPromoter P100042 ProximalPromoter Unique Tile chr18:77977231-77978133 (+) NM_007505 + 37 77978096 11946 Atp5a1 AI035633|AL022851|AL023067|Atpm|D18Ertd206e ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1 MGI:88115 Mm.276137 18 18 E3|18 50.0 cM ATP5A1 498 NM_146089 - 5375 77971856 225745 Ccdc5 0 atttgggcttcgaagatggat acagcatccttgcagcttctc 2 6 1 1.1.1.2.1.6 BCBC-5A-0 14093146 P101164 Cfd ProximalPromoter P101164 ProximalPromoter Unique Tile chr10:79293068-79294144 (+) NM_013459 + 104 79294040 11537 Cfd Adn|DF|factor D complement factor D (adipsin) MGI:87931 Mm.4407 10 10 C1|10 43.0 cM CFD 1675 NM_015779 + 3605 79289463 50701 Ela2 0 caggctggcctagagaactca gctgtgtcaaactggtccctc 2 6 2 1.1.1.2.2.6 BCBC-5A-0 14093165 P102004 3110031B13Rik ProximalPromoter P102004 ProximalPromoter Unique Tile chr13:105936546-105937572 (+) NM_026075 + 48 105937620 67288 3110031B13Rik AI462702|AV348305|AW121048 RIKEN cDNA 3110031B13 gene MGI:1914538 Mm.125465 13 13 D1 P18SRP 285672 NM_026072 - 237 105937335 67285 Sdccag10 0 agcaaaggcaggtgtgttcat aagtggctgtggatgcagttt 2 6 3 1.1.1.2.3.6 BCBC-5A-0 14093184 P102765 Cyp1a2 ProximalPromoter P102765 ProximalPromoter Unique Tile chr9:57480683-57481727 (-) NM_009993 - 1089 57481772 13077 Cyp1a2 CP12|P450-3 cytochrome P450, family 1, subfamily a, polypeptide 2 MGI:88589 Mm.15537 9 9 B|9 31.0 cM CYP1A2 1544 NM_009992 + 4337 57486064 13076 Cyp1a1 0 ctttccagatcatgagacctgct gaaatggaaagatggagtggttg 2 6 4 1.1.1.2.4.6 BCBC-5A-0 14093203 P103887 Snx9 ProximalPromoter P103887 ProximalPromoter Unique Tile chr17:5773319-5774279 (-) NM_025664 + 23566 5797845 66616 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 MGI:1913866 Mm.89515 17 17 A1|17 3.3 cM SNX9 51429 0 ctgttgacaatctcgtgaaggtg tgctatccctgatctgagaggac 2 6 5 1.1.1.2.5.6 BCBC-5A-0 14093222 P104445 Ptk9 DistalPromoter P104445 DistalPromoter Unique Tile chr15:94419093-94420907 (-) NM_008971 - 1083 94418010 19230 Ptk9 A6|twf1|twinfilin protein tyrosine kinase 9 MGI:1100520 Mm.309867 15 15 F1 PTK9 5756 NM_178789 + 36457 94457364 320709 Tmem117 0 tgcgagttgtaaatttcagccat actgagtgtgaaaccactgagcc 2 6 6 1.1.1.2.6.6 BCBC-5A-0 14093241 P104901 Exo1 DistalPromoter P104901 DistalPromoter Unique Tile chr1:177716304-177718423 (+) NM_012012 + 935 177717488 26909 Exo1 Msa exonuclease 1 MGI:1349427 Mm.283046 1 1 H4|1 97.0 cM EXO1 9156 0 agtcagaaaatctccccagcaac tcttaggctgagctctctgggat 2 6 7 1.1.1.2.7.6 BCBC-5A-0 14093260 P105447 4432406C05Rik DistalPromoter P105447 DistalPromoter Unique Tile chr16:8554455-8556519 (-) NM_025708 - 1433 8553022 66690 4432406C05Rik 2810440M13Rik|AI648175|AW210586 RIKEN cDNA 4432406C05 gene MGI:1913940 Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528; Mm.10068; Mm.394528 16 16 A1 C16orf51 25880 NM_016881 + 1376 8553079 54128 Pmm2 0 tgtctctttgggccactgaatta agtaggtttccccatagtgcctg 2 6 8 1.1.1.2.8.6 BCBC-5A-0 14093279 P105570 Nola2 DistalPromoter P105570 DistalPromoter Unique Tile chr11:51460059-51461994 (+) NM_026631 + 1201 51463195 52530 Nola2 2410130M07Rik|D11Ertd175e|Nhp2 nucleolar protein family A, member 2 MGI:1098547 Mm.28203 11 11 B1.3|11 28.5 cM NOLA2 55651 NM_010448 - 9789 51450270 15384 Hnrpab 0 gcccctcaaaccacagtttattc gctctgtgacgtagagggactga 2 6 9 1.1.1.2.9.6 BCBC-5A-0 14093298 P203413 ProximalPromoter P203413 ProximalPromoter Unique Tile chr16:10154717-10155653 (+) 0 tgatctagagtccaggagatggc aaagggttcacaaactgcaacat 2 6 10 1.1.1.2.10.6 BCBC-5A-0 14093317 P202325 D930016N04Rik ProximalPromoter P202325 ProximalPromoter Unique Tile chrX:20245986-20246947 (-) NM_183185 - 202 20246188 245368 D930016N04Rik - RIKEN cDNA D930016N04 gene MGI:3045326 Mm.220470 X X A1.3 NM_001013387 - 27024 20218962 319535 Zfp182 0 gtgtcacagtcaggactttgtgg tgtgtttgcacttgtctgtctca 2 6 11 1.1.1.2.11.6 BCBC-5A-0 14093336 P202499 Cd109 ProximalPromoter P202499 ProximalPromoter Unique Tile chr9:78400471-78401472 (+) NM_153098 + 12 78401460 235505 Cd109 9930012E15Rik|AI480638|GARP CD109 antigen MGI:2445221 Mm.32955 9 9 E1 CD109 135228 NM_172773 - 26760 78373711 235504 Slc17a5 0 ggtagtcatggtgaaaccgagtc ccagggtttagcaatctgaaatg 2 6 12 1.1.1.2.12.6 BCBC-5A-0 14093355 P203240 Rem2 ProximalPromoter P203240 ProximalPromoter Unique Tile chr14:53428994-53430082 (+) NM_080726 + 222 53430304 140743 Rem2 AW411893 rad and gem related GTP binding protein 2 MGI:2155260 Mm.274727 14 14 C2 REM2 50847 NM_022993 + 10611 53418383 65107 Lrp10 0 gaggagtcacctctgccagatta acttctgctccagtgtccaagac 2 6 13 1.1.1.2.13.6 BCBC-5A-0 14093374 P204777 Pde9a ProximalPromoter P204777 ProximalPromoter Unique Tile chr17:31113973-31114986 (+) NM_008804 + 23 31114963 18585 Pde9a PDE9A1 phosphodiesterase 9A MGI:1277179 Mm.10812 17 17 A3.3 PDE9A 5152 1 aagggaagtgctgcatctaacag ctgcacttggactttttcacctt 2 6 14 1.1.1.2.14.6 BCBC-5A-0 14093393 P206898 Scube2 ProximalPromoter P206898 ProximalPromoter Unique Tile chr7:109657092-109658027 (-) NM_020052 - 261 109656831 56788 Scube2 4932442O19Rik|Cegf1|Cegp1 signal peptide, CUB domain, EGF-like 2 MGI:1928765 Mm.40447 7 7 E3|7 50.0 cM SCUBE2 57758 NM_008836 - 18881 109638211 18690 Phxr5 2 gacctgactgcctttactggaga gagagtgtctcggagagtaccca 2 6 15 1.1.1.2.15.6 BCBC-5A-0 14093412 P201130 6430510M02Rik ProximalPromoter P201130 ProximalPromoter Unique Tile chr2:37401903-37402836 (-) NM_176932 - 53 37401850 319517 6430510M02Rik - RIKEN cDNA 6430510M02 gene MGI:2442183 Mm.237095 2 2 B 0 tggaccctctgtgtatttcaggt atttgtggattaaggtttggcct 2 6 16 1.1.1.2.16.6 BCBC-5A-0 14093431 P200433 1500009M05Rik ProximalPromoter P200433 ProximalPromoter Unique Tile chr3:135364578-135365546 (-) NM_025902 - 3758 135360820 67006 1500009M05Rik 1500026J14Rik|1500031D15Rik|AI848398|B630006A20Rik|Noxp70 RIKEN cDNA 1500009M05 gene MGI:1914256 Mm.269993 3 3 G3 NM_025356 + 10593 135376139 66105 Ube2d3 2 aataaaatgaagaggggttggga ttgcctcccaagtgctagaatta 2 6 17 1.1.1.2.17.6 BCBC-5A-0 14093450 P209633 Ccdc52 ProximalPromoter P209633 ProximalPromoter Unique Tile chr16:44265745-44266809 (+) NM_144550 + 21 44266788 212514 Ccdc52 D16Ertd480e coiled-coil domain containing 52 MGI:1196252 Mm.24035 16 16 B4|16 28.9 cM CCDC52 152185 NM_198034 - 13575 44252170 320007 Sidt1 0 gactggcatgaggttagaggaga cgactaaaagttcagcctccaga 2 6 18 1.1.1.2.18.6 BCBC-5A-0 14093469 P207668 Cyb5 ProximalPromoter P207668 ProximalPromoter Unique Tile chr18:84984738-84985804 (+) NM_025797 + 198 84985606 109672 Cyb5 0610009N12Rik cytochrome b-5 MGI:1926952 Mm.31018 18 18 E4|18 55.0 cM CYB5A 1528 1 tgacttccagacaaaagggtagg tcacctcttcgagaaacttggtc 2 6 19 1.1.1.2.19.6 BCBC-5A-0 14093128 P100066 Calr ProximalPromoter P100066 ProximalPromoter Unique Tile chr8:87737545-87738542 (-) NM_007591 - 573 87736972 12317 Calr CRT|Calregulin calreticulin MGI:88252 Mm.1971 8 8 C3|8 37.0 cM CALR 811 NM_009010 - 6799 87730746 19358 Rad23a 0 attcagaagagcagccagtgc tgcattctggttccacagttg 2 7 1 1.1.1.2.1.7 BCBC-5A-0 14093147 P101188 Matn4 ProximalPromoter P101188 ProximalPromoter Unique Tile chr2:164096171-164097256 (-) NM_013592 - 194 164096365 17183 Matn4 matrilin-4 matrilin 4 MGI:1328314 Mm.29428 2 2 H3|2 94.0 cM MATN4 8785 NM_009036 + 1773 164094398 19668 Rbpsuhl 0 gatcccagtaggcagctgttg ctgtcccttcctggagtgatg 2 7 2 1.1.1.2.2.7 BCBC-5A-0 14093166 P101938 Mrpl33 ProximalPromoter P101938 ProximalPromoter Unique Tile chr5:31889528-31890514 (+) NM_025796 + 38 31890552 66845 Mrpl33 0610009M10Rik mitochondrial ribosomal protein L33 MGI:2137225 Mm.120763 5 5 B1 MRPL33 9553 1 ccacatggtggctcacaacta ccggtagaaggctcaggaagt 2 7 3 1.1.1.2.3.7 BCBC-5A-0 14093185 P102789 Ebf2 ProximalPromoter P102789 ProximalPromoter Unique Tile chr14:66187828-66188830 (+) NM_010095 + 77 66188753 13592 Ebf2 D14Ggc1e|Mmot1|O/E-3 early B-cell factor 2 MGI:894332 Mm.319947 14 14 D-E1|14 28.5 cM EBF2 64641 0 gccgtctagggtttcagctattt aatccccaacaggatcagttgta 2 7 4 1.1.1.2.4.7 BCBC-5A-0 14093204 P103911 Vps53 ProximalPromoter P103911 ProximalPromoter Unique Tile chr11:75996277-75997352 (-) NM_026664 - 452 75995825 68299 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik vacuolar protein sorting 53 (yeast) MGI:1915549 Mm.46397 11 11 B4 VPS53 55275 NM_027773 + 20898 76018250 116972 2310047D13Rik 0 ccagcctggtctacagagtgagt ctagggtggggagtaaggagaaa 2 7 5 1.1.1.2.5.7 BCBC-5A-0 14093223 P104469 Rps15 DistalPromoter P104469 DistalPromoter Unique Tile chr10:79686780-79688712 (+) NM_009091 + 6873 79695585 20054 Rps15 rig ribosomal protein S15 MGI:98117 Mm.643 10 10 C1 RPS15 6209 NM_011789 + 16254 79704966 23805 Apc2 0 tcctacctcagtctcagagggct agcctagagtaaccatgcccaag 2 7 6 1.1.1.2.6.7 BCBC-5A-0 14093242 P105015 Gpiap1 DistalPromoter P105015 DistalPromoter Unique Tile chr2:103599516-103601324 (-) NM_016739 - 1056 103598460 53872 Gpiap1 AL022980|Gpiap|MMGPIP137|P137 GPI-anchored membrane protein 1 MGI:1858234 Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310; Mm.254134; Mm.337310 2 2 E2 GPIAP1 4076 NM_153126 - 37427 103562089 98956 Nat10 0 tagaaagtacatggagctgggca catgctaggaaatctgcagtgct 2 7 7 1.1.1.2.7.7 BCBC-5A-0 14093261 P105471 Aip DistalPromoter P105471 DistalPromoter Unique Tile chr19:4122688-4124715 (+) NM_016666 - 1242 4121446 11632 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Xap2 aryl-hydrocarbon receptor-interacting protein MGI:109622 Mm.10433 19 19 A|19 0.0 cM AIP 9049 NM_025889 + 1262 4125977 66990 Tmem134 0 cagattggcctacagagggagtt caaacatgggctcctgtatcaag 2 7 8 1.1.1.2.8.7 BCBC-5A-0 14093280 P106384 Pacsin3 DistalPromoter P106384 DistalPromoter Unique Tile chr2:91055389-91057252 (+) NM_028733;NM_030880; + 462 91057714 80708 Pacsin3 4921507A02Rik|6330413E15Rik|AW413130 protein kinase C and casein kinase substrate in neurons 3 MGI:1891410 Mm.236650 2 2 E1 PACSIN3 29763 NM_023854 + 8868 91066120 77038 Zfp289 0 aagacccagatgtttcctcaagc gataccttcagcggttatctgcc 2 7 9 1.1.1.2.9.7 BCBC-5A-0 14093299 P203438 Msrb2 ProximalPromoter P203438 ProximalPromoter Unique Tile chr2:19288105-19289135 (+) NM_029619 + 254 19289389 76467 Msrb2 2310050L06Rik|Mrsb|Msrb|Pilb methionine sulfoxide reductase B2 MGI:1923717 Mm.27166 2 2 A2 MSRB2 22921 1 tgcattctcagccatacactgat ttgcagttggttatttctggctt 2 7 10 1.1.1.2.10.7 BCBC-5A-0 14093318 P202259 Tnrc6b ProximalPromoter P202259 ProximalPromoter Unique Tile chr15:80625075-80626054 (+) NM_144812;NM_177124; + 85 80625969 213988 Tnrc6b A730065C02Rik|D230019K20Rik|MGC28739 trinucleotide repeat containing 6b MGI:2443730 Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092; Mm.131328; Mm.412092 15 15 E1 TNRC6B 23112 0 gtctctgaggaggagggactagg aaagtgcagcagtgcttaaatcc 2 7 11 1.1.1.2.11.7 BCBC-5A-0 14093337 P202523 4930562D19Rik ProximalPromoter P202523 ProximalPromoter Unique Tile chr11:4060119-4061056 (-) NM_177616 - 104 4060223 216516 4930562D19Rik KIAA1656|mKIAA1656 RIKEN cDNA 4930562D19 gene MGI:3041210 Mm.386854; Mm.393348; Mm.386854; Mm.393348; Mm.386854; Mm.393348; Mm.386854; Mm.393348; Mm.386854; Mm.393348; Mm.386854; Mm.393348 11 11 A1 NM_026175 + 251 4060370 67465 Sf3a1 2 tcaattggctgtgaaaacagaga gtcaggagggaagttcagagtca 2 7 12 1.1.1.2.12.7 BCBC-5A-0 14093356 P203264 Wdr21 ProximalPromoter P203264 ProximalPromoter Unique Tile chr12:84414977-84415896 (+) NM_030246 + 66 84415830 73828 Wdr21 1110018E21Rik WD repeat domain 21 MGI:1921078 Mm.38238 12 12 D3 WDR21A 26094 NM_058212 - 37521 84377456 70127 Dpf3 0 acagagccagaagaaactgttgg cgttcctaggagagaggaacaca 2 7 13 1.1.1.2.13.7 BCBC-5A-0 14093375 P204802 Plxna1 ProximalPromoter P204802 ProximalPromoter Unique Tile chr6:89328422-89329355 (-) NM_008881 - 185 89328237 18844 Plxna1 2600013D04Rik|KIAA4053|NOV|Plxn1|mKIAA4053 plexin A1 MGI:107685 Mm.3789 6 - PLXNA1 5361 0 attacctttcccactgttgctga tcagccttaaaactctggactgg 2 7 14 1.1.1.2.14.7 BCBC-5A-0 14093394 P206328 Vps45 ProximalPromoter P206328 ProximalPromoter Unique Tile chr3:96143157-96144111 (-) NM_013841 - 68 96143225 22365 Vps45 AI462172|AW554165|mVps45 vacuolar protein sorting 45 (yeast) MGI:891965 Mm.263185 3 3 F2.1|3 50.0 cM VPS45A 11311 NM_001025614;NM_001025613; + 45820 96189931 229603 Otud7b 0 gaacaaaacaccttgatccgaag ttcacagcaaagaccacattcat 2 7 15 1.1.1.2.15.7 BCBC-5A-0 14093413 P201154 Mcoln1 ProximalPromoter P201154 ProximalPromoter Unique Tile chr8:3499291-3500231 (+) NM_053177 + 287 3500518 94178 Mcoln1 2210015I05Rik|MGC7172|TRPML1|mucolipidin mucolipin 1 MGI:1890498 Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356; Mm.397035; Mm.8356 8 8 A1.1|8 1.1 cM MCOLN1 57192 NM_080461 + 3756 3495535 140482 Zfp358 2 gtgaaccacctccctgactattg cctgttaccctcagtagtgtccg 2 7 16 1.1.1.2.16.7 BCBC-5A-0 14093432 P200458 ProximalPromoter P200458 ProximalPromoter No Hits Tile 1 cctcaaactcagaaatccacctg ttaagaacaggggctgagacttg 2 7 17 1.1.1.2.17.7 BCBC-5A-0 14093451 P209658 Camk1g ProximalPromoter P209658 ProximalPromoter Unique Tile chr1:195070855-195071912 (-) NM_144817 - 100 195070955 215303 Camk1g CLICK-III|MGC30513 calcium/calmodulin-dependent protein kinase I gamma MGI:2388073 Mm.40329 1 1 H6 CAMK1G 57172 0 gggacagcacaaacaagaagagt aagataacctccccagagaccag 2 7 18 1.1.1.2.18.7 BCBC-5A-0 14093470 P207602 Tmigd1 ProximalPromoter P207602 ProximalPromoter Unique Tile chr11:76719449-76720508 (+) NM_025655 + 231 76720739 66601 Tmigd1 2010002A20Rik|Tmigd transmembrane and immunoglobulin domain containing 1 MGI:1913851 Mm.25138 11 11 B5 TMIGD1 388364 NM_178645 + 41444 76761952 104184 Blmh 0 ctcagagcatcttttgaagggaa aacttccctagtggggagaaatg 2 7 19 1.1.1.2.19.7 BCBC-5A-0 14093129 P100090 Cd36 ProximalPromoter P100090 ProximalPromoter Unique Tile chr5:17347602-17348539 (-) NM_007643 - 82 17347520 12491 Cd36 FAT|GPIV|Scarb3 CD36 antigen MGI:107899 Mm.18628 5 5 A3|5 2.0 cM CD36 948 0 tccagtcatttttcacccctg aatttgtggttggttgccaag 2 8 1 1.1.1.2.1.8 BCBC-5A-0 14093148 P101212 Tcf4 ProximalPromoter P101212 ProximalPromoter Unique Tile chr18:69468539-69469570 (+) NM_013685 + 319 69469889 21413 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|Hnf-4|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4 transcription factor 4 MGI:98506 Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269 18 - TCF4 6925 0 acgccaatgcttgtgatcttt cctgtcagtgtggatgcagag 2 8 2 1.1.1.2.2.8 BCBC-5A-0 14093167 P101962 Cdk5rap1 ProximalPromoter P101962 ProximalPromoter Unique Tile chr2:154064084-154065074 (-) NM_025876 - 76 154064160 66971 Cdk5rap1 2310066P17Rik CDK5 regulatory subunit associated protein 1 MGI:1914221 Mm.289427 2 2 H2 CDK5RAP1 51654 NM_009228 - 34399 154099473 20648 Snta1 1 gcttcgaattagcctgccttt cacccgcaggacactaaactc 2 8 3 1.1.1.2.3.8 BCBC-5A-0 14093186 P103095 ProximalPromoter P103095 ProximalPromoter No Hits Tile 0 tgaactctggacctttggaagag tggaagtgcaaagtggttgacta 2 8 4 1.1.1.2.4.8 BCBC-5A-0 14093205 P103935 ProximalPromoter P103935 ProximalPromoter Unique Tile chr13:36913841-36914833 (-) 0 ctataactgggtcctttcagcga tagaaccaaggaagtgaatggga 2 8 5 1.1.1.2.5.8 BCBC-5A-0 14093224 P104493 Stil DistalPromoter P104493 DistalPromoter Unique Tile chr4:114495438-114497384 (+) NM_009185 + 747 114498131 20460 Stil Sil Scl/Tal1 interrupting locus MGI:107477 Mm.3988 4 4 D1 STIL 6491 NM_025647 - 10360 114485078 66588 Cmpk 0 tgttgtgcagtggcagtaaagaa caattttgggaaattccttctcg 2 8 6 1.1.1.2.6.8 BCBC-5A-0 14093243 P105039 Sart1 DistalPromoter P105039 DistalPromoter Unique Tile chr19:5390018-5391935 (-) NM_016882 - 1315 5388703 20227 Sart1 - squamous cell carcinoma antigen recognized by T-cells 1 MGI:1309453 Mm.34562 19 19 A SART1 9092 NM_027236 + 23206 5366812 69860 2010003J03Rik 0 agcagccatgttgtctcaggtag caactcccctcagaagtctcaca 2 8 7 1.1.1.2.7.8 BCBC-5A-0 14093262 P105405 Sc4mol DistalPromoter P105405 DistalPromoter Unique Tile chr8:67626979-67628941 (-) NM_025436 - 1209 67625770 66234 Sc4mol 1500001G16Rik|C78600|DESP4|ERG25 sterol-C4-methyl oxidase-like MGI:1913484 Mm.30119 8 8 B3.1 SC4MOL 6307 NM_013494 - 41747 67585232 12876 Cpe 1 acccacagacacagaaaccatgt ctgtgagtgtgtgttcacaaggg 2 8 8 1.1.1.2.8.8 BCBC-5A-0 14093281 P106406 Zfhx4 DistalPromoter P106406 DistalPromoter Unique Tile chr3:5221807-5223676 (+) NM_030708 + 1068 5224744 80892 Zfhx4 A930021B15|C130041O22Rik|Zfh-4|Zfh4 zinc finger homeodomain 4 MGI:2137668 Mm.41522 3 3 A1 ZFHX4 79776 0 tcacttggcaatgatgagagtga ggcatgtgggtgtgctcatatac 2 8 9 1.1.1.2.9.8 BCBC-5A-0 14093300 P203463 Gpr84 ProximalPromoter P203463 ProximalPromoter Unique Tile chr15:103138573-103139483 (-) NM_030720 - 92 103138481 80910 Gpr84 EX33 G protein-coupled receptor 84 MGI:1934129 Mm.160369 15 15 F3 GPR84 53831 NM_013866 - 22878 103162361 29813 Zfp385 1 tgaactcaggacctctggaaaag ctgctaaagtccgagcttctctg 2 8 10 1.1.1.2.10.8 BCBC-5A-0 14093319 P202283 Rnf185 ProximalPromoter P202283 ProximalPromoter Unique Tile chr11:3352613-3353545 (-) NM_145355 - 285 3352328 193670 Rnf185 1700022N24Rik|AL033296|MGC19394 ring finger protein 185 MGI:1922078 Mm.136973 11 11 A1 NM_027820 + 139 3352474 71523 8430429K09Rik 0 cggaagtcccttcttgttctaca atgggtcagaacttcaatgtcgt 2 8 11 1.1.1.2.11.8 BCBC-5A-0 14093338 P203901 Zfp715 ProximalPromoter P203901 ProximalPromoter Unique Tile chr7:43181165-43182234 (-) NM_027264 - 10 43181175 69930 Zfp715 2610041B18Rik|mszf15 zinc finger protein 715 MGI:1917180 Mm.45367 7 7 B3 NM_145581 + 37090 43219324 233186 Siglecf 0 ttcagttatgtagcccaggttgg tttaaggtttcacggccactcta 2 8 12 1.1.1.2.12.8 BCBC-5A-0 14093357 P203289 Myd88 ProximalPromoter P203289 ProximalPromoter Unique Tile chr9:119188592-119189500 (-) NM_010851 - 81 119188673 17874 Myd88 - myeloid differentiation primary response gene 88 MGI:108005 Mm.213003 9 9 F3|9 70.0 cM MYD88 4615 NM_130864 + 491 119189991 113868 Acaa1a 0 ggtgtgaagaaccgattaaggtg caagggtatggagaacatgaagg 2 8 13 1.1.1.2.13.8 BCBC-5A-0 14093376 P204826 Map2k1 ProximalPromoter P204826 ProximalPromoter Unique Tile chr9:64051512-64052406 (-) NM_008927 - 99 64051611 26395 Map2k1 MAPKK1|MEKK1|Mek1|Prkmk1 mitogen activated protein kinase kinase 1 MGI:1346866 Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740; Mm.248907; Mm.426740 9 9 C|9 36.0 cM MAP2K1 5604 NM_016723 + 18275 64033237 50933 Uchl3 0 tagctgtccaggctactccaaac cactacccacagctcagctacag 2 8 14 1.1.1.2.14.8 BCBC-5A-0 14093395 P206353 Zfp238 ProximalPromoter P206353 ProximalPromoter Unique Tile chr1:179280243-179281219 (+) NM_013915;NM_001012330; + 116 179281335 30928 Zfp238 RP58 zinc finger protein 238 MGI:1353609 Mm.330700 1 1 H3 ZNF238 10472 1 ttctaagcgagcctaagtggttg tactcctctacactcctgccacc 2 8 15 1.1.1.2.15.8 BCBC-5A-0 14093414 P201088 Prei4 ProximalPromoter P201088 ProximalPromoter Unique Tile chr2:132269918-132270818 (-) NM_027096;NM_028802; - 299 132269619 74182 Prei4 2310004G06Rik|2310032D16Rik|mKIAA1434 preimplantation protein 4 Mm.211211 2 2 F3 2 gccaatgtggaactcaaggatac ccagccaaggctataaagtgaga 2 8 16 1.1.1.2.16.8 BCBC-5A-0 14093433 P200482 Rrm2b ProximalPromoter P200482 ProximalPromoter Unique Tile chr15:37923631-37924666 (-) NM_199476 - 17987 37905644 382985 Rrm2b p53R2 ribonucleotide reductase M2 B (TP53 inducible) MGI:2155865 Mm.24738 15 15 B3.1 RRM2B 50484 0 agagctgtctgaccttgcagttt aaacagaggccatctaagcacag 2 8 17 1.1.1.2.17.8 BCBC-5A-0 14093452 P209682 BC011248 ProximalPromoter P209682 ProximalPromoter Unique Tile chr17:46137726-46138763 (-) NM_144857 - 280 46137446 224823 BC011248 MGC19067 cDNA sequence BC011248 MGI:2385053 Mm.45101 17 17 C C6orf153 88745 NM_027910 - 5327 46144090 71765 Klhdc3 0 acttttaagttggtggggtggat cagaaataggacacgtttggagg 2 8 18 1.1.1.2.18.8 BCBC-5A-0 14093471 P207626 Tceal8 ProximalPromoter P207626 ProximalPromoter Unique Tile chrX:131518131-131519164 (-) NM_025703 - 438 131518569 66684 Tceal8 3930402F23Rik transcription elongation factor A (SII)-like 8 MGI:1913934 Mm.182094 X X F1 TCEAL8 90843 NM_177919 - 29648 131548812 331532 Tceal5 0 ctgtgctttcacttgcagtcatt cggatagcacaaagtttttccac 2 8 19 1.1.1.2.19.8 BCBC-5A-0 14093130 P100396 Pcx ProximalPromoter P100396 ProximalPromoter Unique Tile chr19:4593022-4594115 (+) NM_008797 + 242 4594357 18563 Pcx Pc pyruvate carboxylase MGI:97520 Mm.1845 19 19 A|19 0.0 cM PC 5091 NM_153388 - 20717 4614832 225875 Lrfn4 2 gacaggttgggtcccctttag cagctgcagacttttgtggtg 2 9 1 1.1.1.2.1.9 BCBC-5A-0 14093149 P101236 Ihpk1 ProximalPromoter P101236 ProximalPromoter Unique Tile chr9:107881199-107882285 (+) NM_013785 + 21537 107860748 27399 Ihpk1 1200016D08Rik|AU022776|InsP6|Itpk6 inositol hexaphosphate kinase 1 MGI:1351633 Mm.276155 9 9 F2 IHPK1 9807 NM_177910 + 25105 107907390 331026 Gmppb 1 aagtgctgggattaaaggcgt catggaccacaaaaggagagc 2 9 2 1.1.1.2.2.9 BCBC-5A-0 14093168 P101986 Rpl14 ProximalPromoter P101986 ProximalPromoter Unique Tile chr9:120419825-120420784 (+) NM_025974 + 8 120420792 67115 Rpl14 3100001N19Rik|AA407502|AL022816|CAG-ISL-7|CTG-B33|L14 ribosomal protein L14 MGI:1914365 Mm.289810 9 9 F4 RPL14 9045 NM_178676 + 31281 120388544 215446 Entpd3 1 gctggggacagacagttcatc ggaaaagaaacaagggttggc 2 9 3 1.1.1.2.3.9 BCBC-5A-0 14093187 P103119 Xlr3a ProximalPromoter P103119 ProximalPromoter Unique Tile chrX:69349982-69351028 (-) NM_011726 - 221 69349761 22445 Xlr3a MGC102490|MGC130195|MGC130233|Xlr3 X-linked lymphocyte-regulated 3A MGI:109506 Mm.195091 X X A7.3|X 29.12 cM NM_001025384 + 18738 69369766 574405 LOC574405 0 ctatgaagagcattcctgcatcc aaacgtgtgtcagagagaggtcc 2 9 4 1.1.1.2.4.9 BCBC-5A-0 14093206 P103869 Gadd45gip1 ProximalPromoter P103869 ProximalPromoter Unique Tile chr8:87720964-87722055 (+) NM_183358 + 331 87722386 102060 Gadd45gip1 2310040G17Rik|AI425883|Crif1|Plinp1 growth arrest and DNA-damage-inducible, gamma interacting protein 1 MGI:1914947 Mm.276291 8 8 C3 GADD45GIP1 90480 NM_201227 - 8036 87712928 23863 Dand5 1 aaagtgagttccaagacagccag ttaagtggaggtcagaggacagc 2 9 5 1.1.1.2.5.9 BCBC-5A-0 14093225 P104517 Ss18 DistalPromoter P104517 DistalPromoter Unique Tile chr18:14827121-14829052 (-) NM_009280 - 1189 14825932 268996 Ss18 D130059H17|Ssxt|Syt synovial sarcoma translocation, Chromosome 18 MGI:107708 Mm.31761 18 18 B1 SS18 6760 0 ggagacaccatgaccacagaaac tcaagatggctcatctggtaagg 2 9 6 1.1.1.2.6.9 BCBC-5A-0 14093244 P105063 Copg DistalPromoter P105063 DistalPromoter Unique Tile chr6:87850800-87852687 (+) NM_201244;NM_017477; + 893 87853580 54161 Copg AU019265|BC056168|Copg1|D6Ertd71e|D6Wsu16e|MGC66965 coatomer protein complex, subunit gamma MGI:1858696 Mm.258785 6 6 D1|6 38.0 cM COPG 22820 NM_173737 + 26929 87879616 232210 8430410A17Rik 0 tggctcagcagttaagagtaccg tgagtattaggcaaggggagagg 2 9 7 1.1.1.2.7.9 BCBC-5A-0 14093263 P105429 2410022L05Rik DistalPromoter P105429 DistalPromoter Unique Tile chr8:13891521-13893651 (-) NM_025556 - 1274 13890247 66423 2410022L05Rik 1700029I03Rik|AA409325|AI256813|C85432|MGC11316 RIKEN cDNA 2410022L05 gene MGI:1913673 Mm.29063 8 8 A1.1 C17orf79 55352 NM_025785 + 14131 13907782 66822 Fbxo25 0 gagacgactgtgtggctgtaggt tggggaaaggaatcagaaatgtt 2 9 8 1.1.1.2.8.9 BCBC-5A-0 14093282 P000852 Blank P000852 Buffer Control Negative Blank 2 9 9 1.1.1.2.9.9 BCBC-5A-0 14093301 P203487 Lyzl4 ProximalPromoter P203487 ProximalPromoter Unique Tile chr9:121490098-121491086 (-) NM_026915 - 166 121490264 69032 Lyzl4 1810009N24Rik|AI504271|Lyc4 lysozyme-like 4 MGI:1916282 Mm.33351 9 9 F4 LYZL4 131375 NM_011703 + 327 121491413 22354 Vipr1 2 aattcttggactagaagggccac cctcttctgacaccccataactg 2 9 10 1.1.1.2.10.9 BCBC-5A-0 14093320 P202307 Slc25a15 ProximalPromoter P202307 ProximalPromoter End Repeat Tile chr8:23864323-23865312 (-) NM_181325;NM_011017; - 225 23864098 18408 Slc25a15 D630044L02Rik|Ornt1 solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 MGI:1342274 Mm.200907 8 8 A3 SLC25A15 10166 NM_020560 + 11652 23876964 57312 Mrps31 1 gtgtgtgtgtgtgtgtgtgtgtg ggaggctgtggctttaacagtaa 2 9 11 1.1.1.2.11.9 BCBC-5A-0 14093339 P203925 1500009M05Rik ProximalPromoter P203925 ProximalPromoter Unique Tile chr3:135361039-135361987 (-) NM_025902 - 219 135360820 67006 1500009M05Rik 1500026J14Rik|1500031D15Rik|AI848398|B630006A20Rik|Noxp70 RIKEN cDNA 1500009M05 gene MGI:1914256 Mm.269993 3 3 G3 NM_025356 + 14152 135376139 66105 Ube2d3 0 gatgttacgtgggcataccaaat tcctccgcaactttagtcagttc 2 9 12 1.1.1.2.12.9 BCBC-5A-0 14093358 P203222 Smyd4 ProximalPromoter P203222 ProximalPromoter Unique Tile chr11:75163486-75164547 (+) NM_177009 + 183 75164730 319822 Smyd4 G430029E23Rik SET and MYND domain containing 4 MGI:2442796 Mm.340377 11 11 B5 SMYD4 114826 NM_026653 - 48 75164499 68275 Rpa1 0 aaggatgctctgtggtagaggtg agttgctctagccaatcgttgag 2 9 13 1.1.1.2.13.9 BCBC-5A-0 14093377 P204850 Ptpn14 ProximalPromoter P204850 ProximalPromoter Unique Tile chr1:191462441-191463422 (+) NM_008976 + 34367 191429055 19250 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498; Mm.103369; Mm.4498 1 1 H6 2 ggtaggtatgtggggcattgtta agatgaatccttggagctcactg 2 9 14 1.1.1.2.14.9 BCBC-5A-0 14093396 P206377 Greb1 ProximalPromoter P206377 ProximalPromoter Unique Tile chr12:16765573-16766602 (-) NM_015764 - 17148 16782721 268527 Greb1 5730583K22Rik|9130004E13|AF180470|AU023194|mKIAA0575 gene regulated by estrogen in breast cancer protein MGI:2149712 Mm.218957; Mm.394874; Mm.218957; Mm.394874; Mm.218957; Mm.394874; Mm.218957; Mm.394874; Mm.218957; Mm.394874; Mm.218957; Mm.394874; Mm.218957; Mm.394874; Mm.218957; Mm.394874; Mm.218957; Mm.394874; Mm.218957; Mm.394874; Mm.218957; Mm.394874; Mm.218957; Mm.394874 12 12 A1.1 GREB1 9687 0 gacacttctttctggggatgatg agttctgcctagaagggctgact 2 9 15 1.1.1.2.15.9 BCBC-5A-0 14093415 P201112 Arl6ip2 ProximalPromoter P201112 ProximalPromoter Unique Tile chr17:79764610-79765608 (-) NM_178050;NM_019717; - 108 79764502 56298 Arl6ip2 2010110I21Rik|AA407293|AV334690|Aip-2 ADP-ribosylation factor-like 6 interacting protein 2 MGI:1929492 Mm.175403 17 17 E3 ARL6IP2 64225 0 cccaaccttttacaacttccctc cgccatattattccaaaaccaga 2 9 16 1.1.1.2.16.9 BCBC-5A-0 14093434 P209245 Mlc1 ProximalPromoter P209245 ProximalPromoter Unique Tile chr15:88806212-88807276 (-) NM_133241 - 107 88806319 170790 Mlc1 AW048630|BB074274|Kiaa0027-hp|LVM|MLC|VL|WKL1|mKIAA0027 megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) MGI:2157910 Mm.32780 15 15 E3 MLC1 23209 NM_031260 + 6049 88813325 83456 Mov10l1 0 agaagagggtgttagatcccctg tcaacacaaaatgggaacatgag 2 9 17 1.1.1.2.17.9 BCBC-5A-0 14093453 P209706 Msto1 ProximalPromoter P209706 ProximalPromoter Unique Tile chr3:89000071-89000991 (-) NM_144898 - 244 88999827 229524 Msto1 BC008103|FLJ10504|MGC11722|MGC118015|mst misato homolog 1 (Drosophila) MGI:2385175 Mm.126870 3 3 F1 MSTO1 55154 NM_022994 - 35218 89036209 65111 Dap3 0 ctgtgggtgctcaggttagaact gatgcccctctcctgtagctaat 2 9 18 1.1.1.2.18.9 BCBC-5A-0 14093472 P207650 4933425L06Rik ProximalPromoter P207650 ProximalPromoter Unique Tile chr13:106201582-106202540 (+) NM_025751 + 37 106202503 66763 4933425L06Rik - RIKEN cDNA 4933425L06 gene MGI:1914013 Mm.109093 13 13 D1 NM_029879 - 26366 106175216 52882 D13Bwg1146e 0 cagcactctggggtaccttattg tctcaggtacagtctaggacgcc 2 9 19 1.1.1.2.19.9 BCBC-5A-0 14093131 P100420 Serpinf2 ProximalPromoter P100420 ProximalPromoter Unique Tile chr11:75254497-75255478 (-) NM_008878 - 1173 75255670 18816 Serpinf2 AI747498|Pli|Serpimf2 serine (or cysteine) peptidase inhibitor, clade F, member 2 MGI:107173 Mm.279733 11 11 B5 SERPINF2 5345 NM_011340 - 15769 75238728 20317 Serpinf1 0 aacctggaggcctactcttgg cttctggcctctcccagattt 2 10 1 1.1.1.2.1.10 BCBC-5A-0 14093150 P101170 Clu ProximalPromoter P101170 ProximalPromoter Unique Tile chr14:64921077-64922060 (+) NM_013492 + 674 64922734 12759 Clu AI893575|ApoJ|Cli|D14Ucla3|SP-40|Sgp-2|Sgp2|Sugp-2 clusterin MGI:88423 Mm.200608 14 14 D1|14 28.0 cM CLU 1191 NM_172604 - 13223 64907854 219151 Scara3 0 agccttagcccagttctgacc tctggacctaggaccctcaca 2 10 2 1.1.1.2.2.10 BCBC-5A-0 14093169 P102010 1110008F13Rik ProximalPromoter P102010 ProximalPromoter Unique Tile chr2:156553063-156554022 (+) NM_026124 + 546 156554568 67388 1110008F13Rik AI316789 RIKEN cDNA 1110008F13 gene MGI:1914638 Mm.29264 2 2 H2 C20orf24 55969 NM_173396 + 21546 156531517 228839 Tgif2 0 ctgcgcccaactatctgtagg acaacctgtctcaacgggaaa 2 10 3 1.1.1.2.3.10 BCBC-5A-0 14093188 P103143 Pcbp1 ProximalPromoter P103143 ProximalPromoter Unique Tile chr6:86492034-86493074 (-) NM_011865 - 235 86491799 23983 Pcbp1 WBP17|[a]CP-1|alphaCP-1 poly(rC) binding protein 1 MGI:1345635 Mm.274146 6 6 D1 PCBP1 5093 1 aaagcacctcttgctgtttcatc gcacgtgttttgttaaccctagc 2 10 4 1.1.1.2.4.10 BCBC-5A-0 14093207 P103893 2810417H13Rik ProximalPromoter P103893 ProximalPromoter Unique Tile chr9:65687497-65688441 (+) NM_026515 + 42 65688399 68026 2810417H13Rik AA409629|MGC29306|Ns5apt9|Ns5atp9|mKIAA0101|p15(PAF) RIKEN cDNA 2810417H13 gene MGI:1915276 Mm.351273 9 9 C KIAA0101 9768 NM_019797 - 4441 65683056 56404 Trip4 0 gccctgaatagatttcattgctg gcaccatgttcacacaagaagag 2 10 5 1.1.1.2.5.10 BCBC-5A-0 14093226 P104631 Csnk2b DistalPromoter P104631 DistalPromoter Unique Tile chr17:34730624-34732658 (-) NM_009975 - 1121 34729503 13001 Csnk2b - casein kinase II, beta subunit MGI:88548 Mm.378901 17 17 B1|17 19.02 cM CSNK2B 1460 NM_032460 + 383 34731007 81845 Bat4 0 gccttctgttctccctctgactc gagagagcctggcatttttgttt 2 10 6 1.1.1.2.6.10 BCBC-5A-0 14093245 P105087 Ccnl2 DistalPromoter P105087 DistalPromoter Unique Tile chr4:154661998-154664072 (+) NM_207678 + 7784 154656288 56036 Ccnl2 1700010A01Rik|1810019L15Rik|2010319M22Rik|AA409936|AW261738|Ania-6b|HCLA-150|MGC21593|Pcee|SB138 cyclin L2 MGI:1927119 Mm.23492 4 4 E2|4 83.0 cM CCNL2 81669 NM_025338 + 11373 154675445 66077 Aurkaip1 0 ttccaactctcccaccctaagag atcaaaggtggttggttgttcct 2 10 7 1.1.1.2.7.10 BCBC-5A-0 14093264 P105453 Mrpl33 DistalPromoter P105453 DistalPromoter Unique Tile chr5:31887414-31889534 (+) NM_025796 + 1018 31890552 66845 Mrpl33 0610009M10Rik mitochondrial ribosomal protein L33 MGI:2137225 Mm.120763 5 5 B1 MRPL33 9553 0 ggcctagagccttctggaatgta catgtgggtactggaaagcaaac 2 10 8 1.1.1.2.8.10 BCBC-5A-0 14093283 P000948 Blank P000948 Buffer Control Negative Blank 2 10 9 1.1.1.2.9.10 BCBC-5A-0 14093302 P203420 Strn ProximalPromoter P203420 ProximalPromoter Unique Tile chr17:78655781-78656829 (-) NM_011500 - 14163 78641618 268980 Strn AU022939|D130055P19 striatin, calmodulin binding protein MGI:1333757 Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038; Mm.311915; Mm.362493; Mm.391038 17 17 E3 STRN 6801 2 catgagagacgtcagaccaaatg tggtgcaggggttatcactaact 2 10 10 1.1.1.2.10.10 BCBC-5A-0 14093321 P202331 D930040M24Rik ProximalPromoter P202331 ProximalPromoter Unique Tile chr17:68177572-68178481 (+) NM_177278 + 290 68178771 320858 D930040M24Rik L3mbtl4 RIKEN cDNA D930040M24 gene MGI:2444889 Mm.391043 17 17 E1.2 0 tgcttcctaagacagtagccagg tacgggacagagatgaagggata 2 10 11 1.1.1.2.11.10 BCBC-5A-0 14093340 P203949 Fign ProximalPromoter P203949 ProximalPromoter Unique Tile chr2:63898792-63899883 (-) NM_021716 - 54 63898846 60344 Fign fi|fidget fidgetin MGI:1890647 Mm.130769; Mm.41044; Mm.130769; Mm.41044; Mm.130769; Mm.41044; Mm.130769; Mm.41044; Mm.130769; Mm.41044; Mm.130769; Mm.41044; Mm.130769; Mm.41044 2 2 C1.3|2 34.0 cM FIGN 55137 0 acaaaaggctatctcagccacag aagtttttgaagggaagacggac 2 10 12 1.1.1.2.12.10 BCBC-5A-0 14093359 P203246 Stat5a ProximalPromoter P203246 ProximalPromoter Unique Tile chr11:100675666-100676573 (+) NM_011488 + 2 100676575 20850 Stat5a AA959963|STAT5 signal transducer and activator of transcription 5A MGI:103036 Mm.277403 11 11 D|11 60.5 cM STAT5A 6776 NM_011489 - 9035 100666631 20851 Stat5b 2 agaaggtaggaccagcttcaggt ctacaggaaggagcagagagcag 2 10 13 1.1.1.2.13.10 BCBC-5A-0 14093378 P204868 Rab7 ProximalPromoter P204868 ProximalPromoter Unique Tile chr6:88011063-88012124 (-) NM_009005 - 202 88010861 19349 Rab7 MGC102153 RAB7, member RAS oncogene family MGI:105068 Mm.333233 6 6 D1|6 38.5 cM RAB7 7879 NM_133933 + 38027 88050151 103963 Rpn1 0 actgtggaaagtctgactggacc ccatattgggccaagaactgata 2 10 14 1.1.1.2.14.10 BCBC-5A-0 14093397 P206402 Dmrt1 ProximalPromoter P206402 ProximalPromoter Unique Tile chr19:25571839-25572778 (+) NM_015826 + 24 25572802 50796 Dmrt1 - doublesex and mab-3 related transcription factor 1 MGI:1354733 Mm.391208 19 19 C2-C3 DMRT1 1761 0 tttagcctctaccacagtgaggg gcccaggacttttggatactttt 2 10 15 1.1.1.2.15.10 BCBC-5A-0 14093416 P201136 Zcchc8 ProximalPromoter P201136 ProximalPromoter Unique Tile chr5:123981884-123982898 (-) NM_027494 - 326 123981558 70650 Zcchc8 5730565F05Rik zinc finger, CCHC domain containing 8 MGI:1917900 Mm.279427 5 5 F ZCCHC8 55596 NM_001005525;NM_001005523;NM_025438; - 27132 124010030 208606 1500011J06Rik 2 gagtttgaggacagcctggtcta tacatggctttgacaaaatgtgg 2 10 16 1.1.1.2.16.10 BCBC-5A-0 14093435 P209269 Mat1a ProximalPromoter P209269 ProximalPromoter Unique Tile chr14:40013011-40013956 (+) NM_133653 + 137 40014093 11720 Mat1a AI046368|AdoMet|Ams|MAT|MATA1|SAMS|SAMS1 methionine adenosyltransferase I, alpha MGI:88017 Mm.14064 14 14 C1 MAT1A 4143 NM_023134 + 26544 40040500 20387 Sftpa1 0 tgtataagtgcagggcaggtttt ttcagctctgatgtctcaagtgg 2 10 17 1.1.1.2.17.10 BCBC-5A-0 14093454 P209640 Jmjd2c ProximalPromoter P209640 ProximalPromoter Unique Tile chr4:73722031-73723032 (+) NM_144787 + 146 73723178 76804 Jmjd2c 2410141F18Rik|AA517467|Gasc1 jumonji domain containing 2C MGI:1924054 Mm.209059 4 4 C3 JMJD2C 23081 0 ctgtctttacagtgctcccccta gtcacgtgggtctctaaactgct 2 10 18 1.1.1.2.18.10 BCBC-5A-0 14093473 P207674 Crnkl1 ProximalPromoter P207674 ProximalPromoter Unique Tile chr2:145626119-145627067 (-) NM_025820 - 13 145626106 66877 Crnkl1 1200013P10Rik|C80326|crn Crn, crooked neck-like 1 (Drosophila) MGI:1914127 Mm.248755 2 2 G1 CRNKL1 51340 NM_175280 + 105 145626224 78774 4930529M08Rik 0 cttcccaattttgctgtcaattc caacagagtcagccacaacaaac 2 10 19 1.1.1.2.19.10 BCBC-5A-0 14093132 P100444 Psmc5 ProximalPromoter P100444 ProximalPromoter Unique Tile chr11:106070601-106071656 (+) NM_008950 + 598 106072254 19184 Psmc5 mSUG1 protease (prosome, macropain) 26S subunit, ATPase 5 MGI:105047 Mm.272361 11 11 E1 PSMC5 5705 NM_025310 - 233 106071889 56095 Ftsj3 0 ccctgtctcgaaagaccacac aggaacaacatccccgtcttt 2 11 1 1.1.1.2.1.11 BCBC-5A-0 14093151 P101194 Odc1 ProximalPromoter P101194 ProximalPromoter Unique Tile chr12:17569399-17570429 (+) NM_013614 + 35 17570464 18263 Odc1 MGC103389|ODC ornithine decarboxylase, structural 1 MGI:97402 Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102; Mm.287163; Mm.34102 12 12 A1.1|12 6.0 cM ODC1 4953 1 gtatctcaacgtctgggctgg cgctacttatacgccgagcac 2 11 2 1.1.1.2.2.11 BCBC-5A-0 14093170 P102327 Hcn3 ProximalPromoter P102327 ProximalPromoter Unique Tile chr3:89246450-89247422 (-) NM_008227 - 366 89246084 15168 Hcn3 BCNG-4|Bcng4|Hac3|Hcn4 hyperpolarization-activated, cyclic nucleotide-gated K+ 3 MGI:1298211 Mm.389461 3 3 F2 HCN3 57657 NM_007712 + 3330 89250752 12748 Clk2 0 gaattgaactcaggacctctgga tgttctgaccatgtcctttctca 2 11 3 1.1.1.2.3.11 BCBC-5A-0 14093189 P103167 Mmp23 ProximalPromoter P103167 ProximalPromoter Unique Tile chr4:154497135-154498099 (-) NM_011985 - 45 154497090 26561 Mmp23 CA-MMP|MGC130334|MGC130335 matrix metallopeptidase 23 MGI:1347361 Mm.29373 4 4 E2 MMP23B 8510 NM_145124 - 14928 154513027 76580 Mib2 0 gccaagctcttgacagttacgtt gaaccgactcgttaagtctggaa 2 11 4 1.1.1.2.4.11 BCBC-5A-0 14093208 P103917 Cab39l ProximalPromoter P103917 ProximalPromoter Unique Tile chr14:58411835-58412858 (+) NM_026908 + 17752 58395106 69008 Cab39l 1500031K13Rik|2810425O13Rik|4930520C08Rik|AA589432|MO2L calcium binding protein 39-like MGI:1914081 Mm.179091 14 14 C3 CAB39L 81617 0 ttccacctatgaaactggatgct tcatcattttcctgctaccacct 2 11 5 1.1.1.2.5.11 BCBC-5A-0 14093227 P104655 Dazap1 DistalPromoter P104655 DistalPromoter Unique Tile chr10:79665769-79667791 (-) NM_133188 + 411 79668202 70248 Dazap1 2410042M16Rik|mPrrp DAZ associated protein 1 MGI:1917498 Mm.148693 10 10 C1 DAZAP1 26528 NM_010255 - 1628 79664141 14431 Gamt 1 aggggaaaaagtctaagatgccc ctgttggtgccctcattttacag 2 11 6 1.1.1.2.6.11 BCBC-5A-0 14093246 P105021 Nucb2 DistalPromoter P105021 DistalPromoter Unique Tile chr7:116292530-116294479 (+) NM_016773 + 1038 116295517 53322 Nucb2 AI607786|Nefa nucleobindin 2 MGI:1858179 Mm.9901 7 7 F1 NUCB2 4925 1 ttgtttcatacggcaggctctta ctgcaatggaaaccactgttagc 2 11 7 1.1.1.2.7.11 BCBC-5A-0 14093265 P105477 Trappc6a DistalPromoter P105477 DistalPromoter Unique Tile chr7:18664373-18666470 (+) NM_025960 + 776 18667246 67091 Trappc6a 1810073E21Rik|4930519D19Rik|AI480686|MGC117907 trafficking protein particle complex 6A MGI:1914341 Mm.44213 7 7 A3 TRAPPC6A 79090 NM_177692 - 383 18666853 232946 Bloc1s3 1 tcttcagacacaccagaagaggg atatacgcgtgcgtctctagcac 2 11 8 1.1.1.2.8.11 BCBC-5A-0 14093284 P001044 Blank P001044 Buffer Control Negative Blank 2 11 9 1.1.1.2.9.11 BCBC-5A-0 14093303 P203445 Ubadc1 ProximalPromoter P203445 ProximalPromoter Unique Tile chr2:25843980-25845061 (-) NM_133835 - 260 25843720 98766 Ubadc1 1110033G07Rik|AA407978|GBDR1|Gdbr1 ubiquitin associated domain containing 1 MGI:1920995 Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974; Mm.247824; Mm.422974 2 2 A3 UBADC1 10422 0 ctccacaattccttctgctcact tgcataccgggagttgtagttct 2 11 10 1.1.1.2.10.11 BCBC-5A-0 14093322 P201860 B130050K08 ProximalPromoter P201860 ProximalPromoter Unique Tile chr16:49992597-49993594 (-) NM_175010 - 145 49992452 224180 B130050K08 - hypothetical protein B130050K08 Mm.146439 16 16 B5 2 ttactgggaactggtagggacaa cgcagtctaagtctctttcagcc 2 11 11 1.1.1.2.11.11 BCBC-5A-0 14093341 P203973 BC060632 ProximalPromoter P203973 ProximalPromoter Unique Tile chr8:113607044-113608021 (+) NM_198625 + 139 113608160 244654 BC060632 MGC79213 cDNA sequence BC060632 MGI:3039591 Mm.334807 8 8 E1 LOC92154 92154 1 ctgccccaataaagaaatcacag ccagaaaccagggctttgaaat 2 11 12 1.1.1.2.12.11 BCBC-5A-0 14093360 P203270 Il13ra2 ProximalPromoter P203270 ProximalPromoter Unique Tile chrX:142650181-142651254 (-) NM_008356 - 19 142650200 16165 Il13ra2 CD213a2 interleukin 13 receptor, alpha 2 MGI:1277954 Mm.368330 X X F2|X 63.0 cM IL13RA2 3598 NM_053230 - 48821 142700075 113857 V1rb9 0 gttgcctatgtcaaaattgagcc atctttccctcctcctctcctct 2 11 13 1.1.1.2.13.11 BCBC-5A-0 14093379 P204893 Bex1 ProximalPromoter P204893 ProximalPromoter Unique Tile chrX:131561953-131562956 (-) NM_009052 - 76 131561877 19716 Bex1 AA407839|AU018692|Bex4|MGC107097|Rex3 brain expressed gene 1 MGI:1328321 Mm.422943 X X F1|X 57.5 cM BEX1 55859 NM_177919 - 11713 131550240 331532 Tceal5 0 gcacagtaaattctggctcacct aaagttcaggtcccttcttcacc 2 11 14 1.1.1.2.14.11 BCBC-5A-0 14093398 P206334 Znhit2 ProximalPromoter P206334 ProximalPromoter Unique Tile chr19:6060013-6061011 (+) NM_013859 + 180 6061191 29805 Znhit2 C11orf5|Fon|ORF6 zinc finger, HIT domain containing 2 MGI:1352481 Mm.2310 19 19 A ZNHIT2 741 NM_007990 + 2043 6057970 14109 Fau 2 tcaacacaacttgagggaaaaca gaaaatcatgtcgctaatcccag 2 11 15 1.1.1.2.15.11 BCBC-5A-0 14093417 P201160 ProximalPromoter P201160 ProximalPromoter Unique Tile chr5:14259243-14260332 (+) 0 ttatcgtgtgagctttctggtca tgtggactttcagaggatgtcaa 2 11 16 1.1.1.2.16.11 BCBC-5A-0 14093436 P209293 Tmem97 ProximalPromoter P209293 ProximalPromoter Unique Tile chr11:78367031-78367942 (-) NM_133706 - 101 78366930 69071 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e|MGC102369 transmembrane protein 97 MGI:1916321 Mm.29431 11 11 B5|11 45.19 cM TMEM97 27346 NM_018854 + 14392 78352639 55978 Ift20 0 gtggggtccatttctctacctct tagcggggctatagtttgaatga 2 11 17 1.1.1.2.17.11 BCBC-5A-0 14093455 P209664 Ppp1r1b ProximalPromoter P209664 ProximalPromoter Unique Tile chr11:98163849-98164870 (+) NM_144828 + 43 98164827 19049 Ppp1r1b AU040756|DARPP-32|Darpp32 protein phosphatase 1, regulatory (inhibitor) subunit 1B MGI:94860 Mm.45372 11 11 D PPP1R1B 84152 NM_021547 + 9603 98174473 59045 Stard3 1 acacacacacacacacacacctc agcttctgtctatcccccactct 2 11 18 1.1.1.2.18.11 BCBC-5A-0 14093474 P001595 Blank P001595 Buffer Control Negative Blank 2 11 19 1.1.1.2.19.11 BCBC-5A-0 14093133 P100468 Rbpsuhl ProximalPromoter P100468 ProximalPromoter Unique Tile chr2:164093218-164094250 (+) NM_009036 + 148 164094398 19668 Rbpsuhl RBP-L recombining binding protein suppressor of hairless-like (Drosophila) MGI:1196616 Mm.389340 2 2 H3|2 94.0 cM RBPSUHL 11317 NM_013592 - 2115 164096365 17183 Matn4 0 gggatgaacactctggctttg cctaagagcaggcgagaaaca 2 12 1 1.1.1.2.1.12 BCBC-5A-0 14093152 P101218 ProximalPromoter P101218 ProximalPromoter Unique Tile chrX:162197405-162198414 (+) 0 cccgccacaaactaagtgaag ctcgaacagagggttgaccac 2 12 2 1.1.1.2.2.12 BCBC-5A-0 14093171 P102351 Hoxa13 ProximalPromoter P102351 ProximalPromoter Unique Tile chr6:52190890-52191829 (-) NM_008264 - 432 52190458 15398 Hoxa13 Hd|Hox-1.10|MGC124020|MGC124021|MGC124022 homeo box A13 MGI:96173 Mm.377086 6 6 B3|6 26.33 cM HOXA13 3209 NM_010450 - 15540 52175350 15396 Hoxa11 0 gtctgaccagttcacacttgcac cagggatggatacatctttctgc 2 12 3 1.1.1.2.3.12 BCBC-5A-0 14093190 P103101 Tyrobp ProximalPromoter P103101 ProximalPromoter Unique Tile chr7:30121504-30122532 (+) NM_011662 + 15 30122547 22177 Tyrobp DAP12|KARAP|Ly83 TYRO protein tyrosine kinase binding protein MGI:1277211 Mm.46301 7 7 B|7 10.0 cM TYROBP 7305 NM_011827 - 6030 30128562 23900 Hcst 0 gcattagcttctgtcccatgact agtgaaggaggaagtgtgaggtg 2 12 4 1.1.1.2.4.12 BCBC-5A-0 14093209 P103941 Atp6v1e2 ProximalPromoter P103941 ProximalPromoter Unique Tile chr17:86853363-86854373 (-) NM_029121 - 2838 86856201 74915 Atp6v1e2 4930500C14Rik|Atp6e1|E1 ATPase, H+ transporting, lysosomal V1 subunit E2 MGI:1922165 Mm.159369 17 17 E4 ATP6V1E2 90423 NM_145491 + 17063 86871436 104215 Rhoq 0 gtcagaggtcaactcggttctgt gtttccagggtgttgctaatgtc 2 12 5 1.1.1.2.5.12 BCBC-5A-0 14093228 P104679 Hipk3 DistalPromoter P104679 DistalPromoter Unique Tile chr2:104296636-104298518 (-) NM_010434 - 1553 104295083 15259 Hipk3 DYRK6|FIST3|PKY homeodomain interacting protein kinase 3 MGI:1314882 Mm.257925; Mm.389331; Mm.257925; Mm.389331; Mm.257925; Mm.389331; Mm.257925; Mm.389331; Mm.257925; Mm.389331; Mm.257925; Mm.389331; Mm.257925; Mm.389331; Mm.257925; Mm.389331; Mm.257925; Mm.389331; Mm.257925; Mm.389331 2 2 E2 HIPK3 10114 0 tctagactgtgggggatcaaaca tctacatccaaaaggagggcaat 2 12 6 1.1.1.2.6.12 BCBC-5A-0 14093247 P105045 Cks1b DistalPromoter P105045 DistalPromoter Unique Tile chr3:89505496-89507494 (-) NM_016904 - 1278 89504218 54124 Cks1b 2410005G18Rik|2610005D03Rik|AA407784|Cks1|sid1334 CDC28 protein kinase 1b MGI:1889208 Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643; Mm.272221; Mm.3049; Mm.401643 3 3 F1 CKS1B 1163 NM_011368 + 956 89504540 20416 Shc1 0 ctaaggagagagaccaatcccca gggagtcaaagttttcctgctgt 2 12 7 1.1.1.2.7.12 BCBC-5A-0 14093266 P105987 Cpb2 DistalPromoter P105987 DistalPromoter Unique Tile chr14:73973188-73975220 (+) NM_019775 + 1221 73976441 56373 Cpb2 1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|MGC107573|TAFI carboxypeptidase B2 (plasma) MGI:1891837 Mm.24242 14 14 D2 CPB2 1361 NM_026083 + 43307 74018527 67302 Zc3h13 0 agtttgagttcctgctctggctt gaaggtgagtttgcaaaatgtgg 2 12 8 1.1.1.2.8.12 BCBC-5A-0 14093285 P001140 Blank P001140 Buffer Control Negative Blank 2 12 9 1.1.1.2.9.12 BCBC-5A-0 14093304 P203469 Chtf18 ProximalPromoter P203469 ProximalPromoter Unique Tile chr17:25454901-25455997 (-) NM_145409 - 101 25455002 214901 Chtf18 6030457M03Rik|Chl12|MGC38008 CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) MGI:2384887 Mm.102540 17 17 A3.3 CHTF18 63922 NM_028009 + 449 25455350 106707 Rpusd1 0 gtgtacctgaacccatagcaggt cctccacaccatacagatcttcc 2 12 10 1.1.1.2.10.12 BCBC-5A-0 14093323 P201886 LOC328644 ProximalPromoter P201886 ProximalPromoter Unique Tile chr16:20515268-20516297 (+) NM_198629 + 20 20516317 328644 LOC328644 MGC130431 hypothetical gene supported by AK045595 Mm.40539 16 16 A3 NM_145939 - 7990 20524287 208624 Alg3 1 ctcgatgattcaggtaagggttg agggtttctctgtatagccctgg 2 12 11 1.1.1.2.11.12 BCBC-5A-0 14093342 P203907 2010011I20Rik ProximalPromoter P203907 ProximalPromoter Unique Tile chr2:172035735-172036649 (+) NM_025912 + 170 172036819 67017 2010011I20Rik AI430961|AV108736 RIKEN cDNA 2010011I20 gene MGI:1914267 Mm.30013 2 2 H3 C20orf108 116151 NM_011497 - 25062 172061711 20878 Aurka 0 ttggatagcaagtgatccacaga cagaagcagcctatccatgagtg 2 12 12 1.1.1.2.12.12 BCBC-5A-0 14093361 P203296 Homer3 ProximalPromoter P203296 ProximalPromoter Unique Tile chr8:73210873-73211840 (+) NM_011984 + 198 73212038 26558 Homer3 AW146114 homer homolog 3 (Drosophila) MGI:1347359 Mm.284505 8 8 C1 HOMER3 9454 NM_001024922 - 19601 73231441 234374 Ddx49 0 tctagaaaagtgcagcaagggat caggaggtcaagaggaggaactt 2 12 13 1.1.1.2.13.12 BCBC-5A-0 14093380 P204918 Satb1 ProximalPromoter P204918 ProximalPromoter Unique Tile chr17:51298348-51299302 (-) NM_009122 - 219 51298129 20230 Satb1 2610306G12Rik|AW413156 special AT-rich sequence binding protein 1 MGI:105084 Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708; Mm.126193; Mm.311655; Mm.428708 17 17 C SATB1 6304 0 taccaaggctcaaatcgctagtc gacctccttcccttcaaactgat 2 12 14 1.1.1.2.14.12 BCBC-5A-0 14093399 P206359 Cbx8 ProximalPromoter P206359 ProximalPromoter Unique Tile chr11:118856999-118858053 (-) NM_013926 - 4 118857003 30951 Cbx8 Pc3 chromobox homolog 8 (Drosophila Pc class) MGI:1353589 Mm.99953 11 11 E2 CBX8 57332 NM_007623 + 17881 118839118 12416 Cbx2 2 tcgatggtcataggctccttaaa ctcgacagcccataatactctcc 2 12 15 1.1.1.2.15.12 BCBC-5A-0 14093418 P202349 E130012K09 ProximalPromoter P202349 ProximalPromoter Unique Tile chr10:93728239-93729203 (-) NM_174999 - 216 93728455 215472 E130012K09 - hypothetical protein E130012K09 Mm.255656 10 10 C2 0 cctattggctcagtgaacagctt cgagatctgtagggcaagagaaa 2 12 16 1.1.1.2.16.12 BCBC-5A-0 14093437 P209318 2810405J04Rik ProximalPromoter P209318 ProximalPromoter Unique Tile chr17:75456799-75457711 (-) NM_133747 - 104 75456903 72722 2810405J04Rik AL024114 RIKEN cDNA 2810405J04 gene MGI:1919972 Mm.24641 17 17 E2 FAM98A 25940 1 agcctggtctgcatagtgagttc accctagatcttccaacgactcc 2 12 17 1.1.1.2.17.12 BCBC-5A-0 14093456 P209688 Reep2 ProximalPromoter P209688 ProximalPromoter Unique Tile chr18:34965551-34966476 (+) NM_144865 + 155 34966631 225362 Reep2 BC020184|C85440|MGC28827 receptor accessory protein 2 MGI:2385070 Mm.293588 18 18 B1 REEP2 51308 NM_007913 + 20704 34987180 13653 Egr1 0 tggaaacataattaccagggtgg ctttcctctaaatcgcctgttca 2 12 18 1.1.1.2.18.12 BCBC-5A-0 14093475 P001691 Blank P001691 Buffer Control Negative Blank 2 12 19 1.1.1.2.19.12 BCBC-5A-0 14093134 P100402 Pfkfb2 ProximalPromoter P100402 ProximalPromoter Unique Tile chr1:132542673-132543604 (-) NM_008825 - 607 132543280 18640 Pfkfb2 4930568D07Rik 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 MGI:107815 Mm.249861 1 1 E4 PFKFB2 5208 NM_178691 + 1268 132544872 226418 9930028C20Rik 0 gaaggcttttaattcaccccg aaaaaggagaggggaagaggg 2 13 1 1.1.1.2.1.13 BCBC-5A-0 14093153 P101242 Gtpbp1 ProximalPromoter P101242 ProximalPromoter Unique Tile chr15:79516737-79517831 (+) NM_013818 + 319 79518150 14904 Gtpbp1 AL022987|AW045683|C85212|GP-1|Gtpbp GTP binding protein 1 MGI:109443 Mm.19080 15 15 E3 GTPBP1 9567 NM_028792 - 1663 79515074 74158 Josd1 0 tttcagaagacctgggttgga agcgaagcagaggtttgactg 2 13 2 1.1.1.2.2.13 BCBC-5A-0 14093172 P102375 Il1r1 ProximalPromoter P102375 ProximalPromoter Unique Tile chr1:40168749-40169698 (+) NM_008362 + 21 40169719 16177 Il1r1 CD121a|CD121b|Il1r-1|MGC129154 interleukin 1 receptor, type I MGI:96545 Mm.896 1 1 B|1 19.5 cM IL1R1 3554 0 ctcagcagttaagggcactgatt ctttgcctccaaatgattactgg 2 13 3 1.1.1.2.3.13 BCBC-5A-0 14093191 P103125 Zfp148 ProximalPromoter P103125 ProximalPromoter Unique Tile chr16:33299217-33300167 (+) NM_011749 + 415 33300582 22661 Zfp148 2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89 zinc finger protein 148 MGI:1332234 Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667; Mm.256809; Mm.391907; Mm.392667 16 16 B3|16 21.1 cM ZNF148 7707 0 ccagctaactgtcccttgctcta agccaggatttcttggatctttc 2 13 4 1.1.1.2.4.13 BCBC-5A-0 14093210 P104247 Dffb DistalPromoter P104247 DistalPromoter Unique Tile chr4:152820367-152822324 (-) NM_007859 - 1441 152818926 13368 Dffb 40kDa|5730477D02Rik|CAD|CPAN|DFF40|Didff DNA fragmentation factor, beta subunit MGI:1196287 Mm.388918 4 4 E2 DFFB 1677 NM_177673 + 1007 152819360 230967 BC046331 0 acacacttgcacacacaccaaac gaatctctgtgagtttgaggcca 2 13 5 1.1.1.2.5.13 BCBC-5A-0 14093229 P104703 DistalPromoter P104703 DistalPromoter No Hits Tile 1 tagcctgcctgcataccaatcta tccatagggaaccgtggaaatac 2 13 6 1.1.1.2.6.13 BCBC-5A-0 14093248 P105069 DistalPromoter P105069 DistalPromoter Unique Tile chr2:23727022-23728953 (+) 0 ggagctcaggaactttgatgtga ttccattatttctcgacctgcct 2 13 7 1.1.1.2.7.13 BCBC-5A-0 14093267 P106009 Mast1 DistalPromoter P106009 DistalPromoter Unique Tile chr8:87829034-87830971 (-) NM_019945 - 1576 87827458 56527 Mast1 9430008B02Rik|SAST|SAST170 microtubule associated serine/threonine kinase 1 MGI:1861901 Mm.154614 8 8 C3|8 38.6 cM MAST1 22983 NM_144929 + 6124 87837095 234542 Rtbdn 0 tatgagggttgtcctggaactca aggatctgtggagagagcatgtg 2 13 8 1.1.1.2.8.13 BCBC-5A-0 14093286 P000864 Blank P000864 Buffer Control Negative Blank 2 13 9 1.1.1.2.9.13 BCBC-5A-0 14093305 P203493 Sidt1 ProximalPromoter P203493 ProximalPromoter Unique Tile chr16:44188773-44189683 (-) NM_198034 - 91 44188864 320007 Sidt1 AW045928|B830021E24Rik SID1 transmembrane family, member 1 MGI:2443155 Mm.242144 16 16 B4 SIDT1 54847 0 ttccctaccacatcttgtgacct gtaaaaggtgcttgccgtacttg 2 13 10 1.1.1.2.10.13 BCBC-5A-0 14093324 P201910 Ing4 ProximalPromoter P201910 ProximalPromoter Unique Tile chr6:125004272-125005297 (+) NM_133345 + 169 125005466 28019 Ing4 D6Wsu147e|D6Xrf92|p29ING4 inhibitor of growth family, member 4 MGI:107307 Mm.262547 6 6 F2|6 59.3 cM ING4 51147 NM_016845 + 10010 125015307 54137 Acrbp 0 ccagctgtcactacttggtgatg gtcatctacagcgaggctgattt 2 13 11 1.1.1.2.11.13 BCBC-5A-0 14093343 P203931 Siah2 ProximalPromoter P203931 ProximalPromoter Unique Tile chr3:58780416-58781460 (-) NM_009174 - 99 58780317 20439 Siah2 AA415433|Sinh2 seven in absentia 2 MGI:108062 Mm.2847 3 3 D|3 35.0 cM SIAH2 6478 1 aagaatttcgctcgaagtcacag ccacgtttcttttagccattgac 2 13 12 1.1.1.2.12.13 BCBC-5A-0 14093362 P204386 Fscn1 ProximalPromoter P204386 ProximalPromoter Unique Tile chr5:143224267-143225225 (+) NM_007984 + 280 143225505 14086 Fscn1 AI663989|Fan1 fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus) MGI:1352745 Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707; Mm.244068; Mm.289707 5 5 G2|5 86.0 cM FSCN1 6624 0 aagggaggaactagatgtcccag acagtcgtgctctgcagtagttg 2 13 13 1.1.1.2.13.13 BCBC-5A-0 14093381 P204942 Sepp1 ProximalPromoter P204942 ProximalPromoter Unique Tile chr15:3220028-3221064 (+) NM_009155;NM_001042613;NM_001042614; + 59 3221005 20363 Sepp1 AU018766|D15Ucla1|Se-P|selp selenoprotein P, plasma, 1 MGI:894288 Mm.22699 15 15 A1|15 5.9 cM SEPP1 6414 0 agctgtgagaaaactgtgggttc agtcctacttacgcaaccccttc 2 13 14 1.1.1.2.14.13 BCBC-5A-0 14093400 P206384 Mfap5 ProximalPromoter P206384 ProximalPromoter Unique Tile chr6:122478560-122479472 (+) NM_015776 + 177 122479295 50530 Mfap5 MAGP-2 microfibrillar associated protein 5 MGI:1354387 Mm.41931 6 6 F1 MFAP5 8076 NM_009645 + 39964 122519436 11628 Aicda 0 agcactccacaaactaggcaaag tctcctttgagttccccacataa 2 13 15 1.1.1.2.15.13 BCBC-5A-0 14093419 P202373 Rnf168 ProximalPromoter P202373 ProximalPromoter Unique Tile chr16:32196046-32197090 (+) NM_027355 + 145 32197235 70238 Rnf168 3110001H15Rik ring fnger protein 168 MGI:1917488 Mm.228263; Mm.390878; Mm.404779; Mm.228263; Mm.390878; Mm.404779; Mm.228263; Mm.390878; Mm.404779; Mm.228263; Mm.390878; Mm.404779; Mm.228263; Mm.390878; Mm.404779; Mm.228263; Mm.390878; Mm.404779; Mm.228263; Mm.390878; Mm.404779; Mm.228263; Mm.390878; Mm.404779 16 16 B2 NM_183283 + 4832 32191214 69576 2310010M20Rik 2 tttaatcagggctggcttacaaa tctaaaccaagatccgaacagga 2 13 16 1.1.1.2.16.13 BCBC-5A-0 14093438 P209251 Vgll1 ProximalPromoter P209251 ProximalPromoter Unique Tile chrX:53435359-53436272 (+) NM_133251 + 1383 53434889 170828 Vgll1 Tondu vestigial like 1 homolog (Drosophila) MGI:2655768 Mm.190616 X X A5 VGLL1 51442 NM_028242 + 34961 53400398 72459 Htatsf1 0 acaaagctcattggaagatgagg tccttacctggtgagtggaaaaa 2 13 17 1.1.1.2.17.13 BCBC-5A-0 14093457 P209712 Bcdin3 ProximalPromoter P209712 ProximalPromoter Unique Tile chr5:138014949-138015943 (-) NM_144913 - 1012 138015961 231803 Bcdin3 D5Wsu46e|MGC28888|MGC30590 bin3, bicoid-interacting 3, homolog (Drosophila) MGI:106477 Mm.61193 5 5 G2|5 78.0 cM BCDIN3 56257 NM_001005426 + 1719 138017662 381678 Zcwpw1 1 gtgaggtggtcttaggaagggtt cagttgatggctgtgttgagttc 2 13 18 1.1.1.2.18.13 BCBC-5A-0 14093476 P001787 Blank P001787 Buffer Control Negative Blank 2 13 19 1.1.1.2.19.13 BCBC-5A-0 14093135 P100426 Pon3 ProximalPromoter P100426 ProximalPromoter Unique Tile chr6:5206172-5207132 (-) NM_173006 - 61 5206233 269823 Pon3 2810004E20|AI786302 paraoxonase 3 MGI:106686 Mm.9122 6 6 A1|6 0.5 cM PON3 5446 NM_183308 - 41172 5248304 330260 Pon2 0 agatgatccttgaaggtgcga cccctattaaggccagacagg 2 14 1 1.1.1.2.1.14 BCBC-5A-0 14093154 P101548 Rpl36a ProximalPromoter P101548 ProximalPromoter Unique Tile chrX:129930343-129931399 (+) NM_019865 + 639 129932038 19982 Rpl36a L44L|Rpl44 ribosomal protein L36a MGI:1201789 Mm.286408 X X E3 RPL36A 6173 NM_013482 - 877 129929466 12229 Btk 0 tttgtgtcccagcttccatct ttggctctgaaaactggcaat 2 14 2 1.1.1.2.2.14 BCBC-5A-0 14093173 P102399 Kcnu1 ProximalPromoter P102399 ProximalPromoter Unique Tile chr8:27314096-27315031 (+) NM_008432 + 169 27315200 16532 Kcnu1 Kcnma3|Slo3|mSlo3 potassium channel, subfamily U, member 1 MGI:1202300 Mm.289679 8 8 A3 KCNU1 157855 NM_011791 - 7782 27306314 23808 Ash2l 0 tccgtctccaggaaatagtgtgt tcaactgacagagaatgcgagag 2 14 3 1.1.1.2.3.14 BCBC-5A-0 14093192 P103149 Scn11a ProximalPromoter P103149 ProximalPromoter Unique Tile chr9:119668819-119669884 (-) NM_011887 - 3739 119672558 24046 Scn11a NSS2|NaN|NaT|SNS2 sodium channel, voltage-gated, type XI, alpha MGI:1345149 Mm.89981 9 9 F3-F4|9 71.0 cM SCN11A 11280 0 gtacactacatgcatgaaacgcc ggtgacagggtttaggtgtcaac 2 14 4 1.1.1.2.4.14 BCBC-5A-0 14093211 P104271 Ptk2 DistalPromoter P104271 DistalPromoter Unique Tile chr15:73223023-73224935 (-) NM_007982 - 1043 73221980 14083 Ptk2 FAK|FRNK|Fadk|KIAA4203|mKIAA4203 PTK2 protein tyrosine kinase 2 MGI:95481 Mm.254494 15 15 D3|15 42.0 cM PTK2 5747 0 gtggatatgggggacttttggta aggccagaatggacatagggtaa 2 14 5 1.1.1.2.5.14 BCBC-5A-0 14093230 P104637 Dpm2 DistalPromoter P104637 DistalPromoter Unique Tile chr2:32389877-32391978 (+) NM_010073 + 888 32392866 13481 Dpm2 AW557993|R75484 dolichol-phosphate (beta-D) mannosyltransferase 2 MGI:1330238 Mm.22001 2 2 B DPM2 8818 NM_175679 - 5715 32397693 319245 9430097D07Rik 0 tgaccctctgcttactgcttcac cctttgtcaagtgcccattcata 2 14 6 1.1.1.2.6.14 BCBC-5A-0 14093249 P105093 Lgals8 DistalPromoter P105093 DistalPromoter Unique Tile chr13:12515051-12517104 (-) NM_018886 - 668 12515719 56048 Lgals8 1200015E08Rik|AI326142|D13Ertd524e|Lgals-8 lectin, galactose binding, soluble 8 MGI:1928481 Mm.171186 13 13 A1|13 8.0 cM LGALS8 3964 1 cctctcctagcccaaagtcacat ggcactcgccaaatctcttattt 2 14 7 1.1.1.2.7.14 BCBC-5A-0 14093268 P106031 Cldn13 DistalPromoter P106031 DistalPromoter Unique Tile chr5:135200912-135203109 (-) NM_020504 - 759 135200153 57255 Cldn13 2500004B14Rik|MGC144291|MGC144292 claudin 13 MGI:1913102 Mm.86652 5 5 G2 NM_029681;NM_194065; - 9552 135191360 76629 Wbscr28 1 cagcactttgagtcctggagaaa aagatcctctttgcagggctatg 2 14 8 1.1.1.2.8.14 BCBC-5A-0 14093287 P000960 Blank P000960 Buffer Control Negative Blank 2 14 9 1.1.1.2.9.14 BCBC-5A-0 14093306 P202831 A730013G03Rik ProximalPromoter P202831 ProximalPromoter Unique Tile chr1:194535897-194536804 (-) NM_177299 - 40 194535937 320952 A730013G03Rik - RIKEN cDNA A730013G03 gene MGI:2445118 Mm.100944 1 1 H6 NM_198247 - 19641 194556445 214791 Sertad4 0 cactggctttagacaagatggct acctcgagtaaataccgggagag 2 14 10 1.1.1.2.10.14 BCBC-5A-0 14093325 P201936 Gpr81 ProximalPromoter P201936 ProximalPromoter Unique Tile chr5:124140553-124141529 (-) NM_175520 - 68 124140621 243270 Gpr81 - G protein-coupled receptor 81 MGI:2441671 Mm.33362 5 5 F GPR81 27198 NM_030701 - 14439 124126114 80885 Gpr109a 1 ggtctgtgtgtgtgtgtgtgtgt gccctggagatgacttttctttt 2 14 11 1.1.1.2.11.14 BCBC-5A-0 14093344 P203955 Asah3l ProximalPromoter P203955 ProximalPromoter Unique Tile chr4:86344700-86345795 (+) NM_139306 + 101 86345694 230379 Asah3l 2410116I05Rik|Acer2|CRG-L1|maCER2 N-acylsphingosine amidohydrolase 3-like MGI:1920932 Mm.266817; Mm.45019; Mm.266817; Mm.45019; Mm.266817; Mm.45019; Mm.266817; Mm.45019; Mm.266817; Mm.45019; Mm.266817; Mm.45019; Mm.266817; Mm.45019; Mm.266817; Mm.45019; Mm.266817; Mm.45019; Mm.266817; Mm.45019 4 4 C4 ASAH3L 340485 NM_009096 - 16102 86328598 20104 Rps6 1 gtgggataatgaggtcacaggag tagtgtagttgtcctcgcaccaa 2 14 12 1.1.1.2.12.14 BCBC-5A-0 14093363 P204410 Fmo3 ProximalPromoter P204410 ProximalPromoter Unique Tile chr1:164821008-164822062 (-) NM_008030 - 158 164821166 14262 Fmo3 AW111792 flavin containing monooxygenase 3 MGI:1100496 Mm.2900 1 1 H2.1|1 92.6 cM FMO3 2328 0 tgtccctatcctgctttatccaa tgatatgttcattccagccacac 2 14 13 1.1.1.2.13.14 BCBC-5A-0 14093382 P204874 Rag2 ProximalPromoter P204874 ProximalPromoter Unique Tile chr2:101424660-101425600 (+) NM_009020 + 14 101425586 19374 Rag2 Rag-2 recombination activating gene 2 MGI:97849 Mm.4988 2 2 E2|2 56.0 cM RAG2 5897 NM_026592 - 4225 101429825 68170 B230118H07Rik 0 tcctgaaaccagatcgaacattt ctgcagggtagagtgtttgtgtg 2 14 14 1.1.1.2.14.14 BCBC-5A-0 14093401 P206408 Mxd3 ProximalPromoter P206408 ProximalPromoter Unique Tile chr13:55339362-55340308 (-) NM_016662 - 7 55339355 17121 Mxd3 4631412E13Rik|Mad3 Max dimerization protein 3 MGI:104987 Mm.20350 13 13 B1|13 32.0 cM MXD3 83463 NM_025596 + 7484 55331878 66494 2610524G07Rik 2 tgtgttttcctaaggccatctgt gtaactgacacggtgccacaag 2 14 15 1.1.1.2.15.14 BCBC-5A-0 14093420 P202397 ProximalPromoter P202397 ProximalPromoter Unique Tile chr5:129485434-129486348 (+) 2 ctgatgctctcttcttgcctctc cactaccttagcttggtcccctt 2 14 16 1.1.1.2.16.14 BCBC-5A-0 14093439 P209275 Ier3 ProximalPromoter P209275 ProximalPromoter Unique Tile chr17:35428785-35429763 (+) NM_133662 + 2 35429765 15937 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 MGI:104814 Mm.25613 17 17 B1 IER3 8870 NM_008027 + 1636 35431399 14251 Flot1 0 ctgcaaaagcagcagtgttctta cgttgtgcagagagtgtagagga 2 14 17 1.1.1.2.17.14 BCBC-5A-0 14093458 P208854 Zfp202 ProximalPromoter P208854 ProximalPromoter Unique Tile chr9:39941585-39942675 (+) NM_030713 + 221 39942896 80902 Zfp202 C130037E22Rik|Znf202 zinc finger protein 202 MGI:1933401 Mm.132196 9 9 B ZNF202 7753 NM_146615 + 3898 39937687 258608 Olfr986 0 agcagtcacatagtgcagcagag tcattgtccacttcctacagggt 2 14 18 1.1.1.2.18.14 BCBC-5A-0 14093477 P001883 Blank P001883 Buffer Control Negative Blank 2 14 19 1.1.1.2.19.14 BCBC-5A-0 14093136 P100450 Ptma ProximalPromoter P100450 ProximalPromoter Unique Tile chr1:88356713-88357765 (+) NM_008972 + 141 88357906 19231 Ptma MGC102090|MGC103390|Thym prothymosin alpha MGI:97803 Mm.19187 1 1 D PTMA 5757 0 ccgaacccgtttatagccatt agtgagcttaaagcggcagtg 2 15 1 1.1.1.2.1.15 BCBC-5A-0 14093155 P101572 Rabgef1 ProximalPromoter P101572 ProximalPromoter Unique Tile chr5:130470482-130471551 (+) NM_019983 + 331 130471882 56715 Rabgef1 Rab5ef|Rabex5|Rin2 RAB guanine nucleotide exchange factor (GEF) 1 MGI:1929459 Mm.288639 5 5 F RABGEF1 27342 NM_172509 + 40892 130429590 212919 Kctd7 0 ggtgatctagcatggtctccg accagaaagggggtagagctg 2 15 2 1.1.1.2.2.15 BCBC-5A-0 14093174 P102333 Hes3 ProximalPromoter P102333 ProximalPromoter Unique Tile chr4:151131573-151132526 (-) NM_008237 - 829 151132402 15207 Hes3 HES-3|MGC144657 hairy and enhancer of split 3 (Drosophila) MGI:104877 Mm.3516 4 4 E2|4 81.5 cM HES3 390992 NM_133788 + 8500 151141026 57295 Icmt 0 tatgggtcctatcgctcaacagt ctcctgccttacctgatgtgagt 2 15 3 1.1.1.2.3.15 BCBC-5A-0 14093193 P103173 Eif2s3x ProximalPromoter P103173 ProximalPromoter Unique Tile chrX:90465496-90466428 (-) NM_012010 - 126 90465370 26905 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked MGI:1349431 Mm.218851 X X C-D|X 32.0 cM EIF2S3 1968 NM_001039060;NM_001039061;NM_001039059;NM_153165; + 21220 90487648 236904 Klhl15 0 ttgaactcaggacctctggaaag gctcggacttctctctgtttgaa 2 15 4 1.1.1.2.4.15 BCBC-5A-0 14093212 P104295 Glud1 DistalPromoter P104295 DistalPromoter Unique Tile chr14:33136258-33138373 (+) NM_008133 + 1469 33139842 14661 Glud1 AI118167|Gdh-X|Glud|Gludl glutamate dehydrogenase 1 MGI:95753 Mm.10600 14 14 B|14 15.5 cM GLUD1 2746 NM_029389 - 1085 33139458 75698 3110001K24Rik 0 ccaggcagtaaagtggagagtga attgagctttccttcccagtgac 2 15 5 1.1.1.2.5.15 BCBC-5A-0 14093231 P104661 Gnmt DistalPromoter P104661 DistalPromoter Unique Tile chr17:46193691-46195701 (-) NM_010321 - 1335 46192356 14711 Gnmt - glycine N-methyltransferase MGI:1202304 Mm.29395 17 17 C|17 10.0 cM GNMT 27232 NM_145488 + 19038 46174653 224824 Pex6 0 tagctcagtggtacagggctcag aatggctgacctatctctccagc 2 15 6 1.1.1.2.6.15 BCBC-5A-0 14093250 P107440 Hpcal1 DistalPromoter P107440 DistalPromoter Unique Tile chr12:17713303-17715117 (+) NM_016677 + 1188 17716305 53602 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 MGI:1855689 Mm.313619 12 12 A1.2 HPCAL1 3241 0 acccccaaaggtctatgtgctaa tggtgcagaaaggcaaaactaaa 2 15 7 1.1.1.2.7.15 BCBC-5A-0 14093269 P105611 Ntn4 DistalPromoter P105611 DistalPromoter Unique Tile chr10:93068093-93070050 (+) NM_021320 + 949 93070999 57764 Ntn4 - netrin 4 MGI:1888978 Mm.391412 10 - NTN4 59277 1 gggatgctcagaagaaaacctgt gctaattgtagctcagggctggt 2 15 8 1.1.1.2.8.15 BCBC-5A-0 14093288 P001056 Blank P001056 Buffer Control Negative Blank 2 15 9 1.1.1.2.9.15 BCBC-5A-0 14093307 P202855 ProximalPromoter P202855 ProximalPromoter Unique Tile chr3:22403753-22404677 (+) 0 gtctgccacttgagattttgctt tacacaggttccttcatgccttt 2 15 10 1.1.1.2.10.15 BCBC-5A-0 14093326 P201867 Lgi1 ProximalPromoter P201867 ProximalPromoter Unique Tile chr19:38328683-38329590 (+) NM_020278 + 335 38329925 56839 Lgi1 BB130740 leucine-rich repeat LGI family, member 1 MGI:1861691 Mm.298251; Mm.397938; Mm.298251; Mm.397938; Mm.298251; Mm.397938; Mm.298251; Mm.397938; Mm.298251; Mm.397938; Mm.298251; Mm.397938 19 19 C3 LGI1 9211 2 gaccgtgcttgacttaccagagt tcttagcataggatgtgggcaat 2 15 11 1.1.1.2.11.15 BCBC-5A-0 14093345 P203979 Pcdhga3 ProximalPromoter P203979 ProximalPromoter Unique Tile chr18:37799433-37800385 (+) NM_033586 + 77 37800308 93711 Pcdhga3 - protocadherin gamma subfamily A, 3 MGI:1935215 Mm.247203 18 18 B3 PCDHGA3 56112 NM_033585 + 4355 37795078 93710 Pcdhga2 1 ctccagagtgctgggattaaaga ttaattcacacaccaccgagttg 2 15 12 1.1.1.2.12.15 BCBC-5A-0 14093364 P204434 B230362M20Rik ProximalPromoter P204434 ProximalPromoter Unique Tile chr7:57255445-57256436 (-) NM_177273 - 555 57254890 320835 B230362M20Rik - RIKEN cDNA B230362M20 gene MGI:2444828 Mm.322668 7 7 B5 NM_008074 - 630 57254815 14407 Gabrg3 2 attatcaagaaaagcctccagcc tctctagggtggtgcttgcttac 2 15 13 1.1.1.2.13.15 BCBC-5A-0 14093383 P204899 Ring1 ProximalPromoter P204899 ProximalPromoter Unique Tile chr17:33635287-33636330 (-) NM_009066 - 190 33635097 19763 Ring1 MGC91250|Ring1A ring finger protein 1 MGI:1101770 Mm.20343 17 17 B1 RING1 6015 NM_013543 - 2179 33638509 14979 H2-Ke6 1 actctgggtcttttcagagggag gctgatccccaacttctctca 2 15 14 1.1.1.2.14.15 BCBC-5A-0 14093402 P206916 Sssca1 ProximalPromoter P206916 ProximalPromoter Unique Tile chr19:5731722-5732795 (-) NM_020491 - 1 5731721 56390 Sssca1 1500016H19Rik|C184L Sjogren's syndrome/scleroderma autoantigen 1 homolog (human) MGI:1913482 Mm.391142 19 19 A SSSCA1 10534 NM_181452;NM_023166; - 2071 5729651 17826 Mtvr2 0 gcactggtccttgatttgtaacc ggaagtgatccaaataagatgcg 2 15 15 1.1.1.2.15.15 BCBC-5A-0 14093421 P202421 Oog4 ProximalPromoter P202421 ProximalPromoter Unique Tile chr4:142716892-142717795 (-) NM_173773 - 97 142716989 242737 Oog4 E330017M15 oogenesin 4 MGI:2684051 Mm.148643 4 4 E1 NM_172877 + 37219 142679673 242736 4732496O08Rik 0 gctcttgccctatgtgtagctgt gactaggttgtgtggaatgaggg 2 15 16 1.1.1.2.16.15 BCBC-5A-0 14093440 P209299 2310037I24Rik ProximalPromoter P209299 ProximalPromoter Unique Tile chr15:98362544-98363906 (-) NM_133714 - 272 98362272 69612 2310037I24Rik B930009D17|MGC101985|MGC102368 RIKEN cDNA 2310037I24 gene MGI:1916862 Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642; Mm.296240; Mm.391642 15 15 F2 C12orf41 54934 NM_009833 - 31764 98395670 12455 Ccnt1 1 ggcacagcaataggaacagtagc gttcgtcttctggtggcagtagt 2 15 17 1.1.1.2.17.15 BCBC-5A-0 14093459 P208878 Krt8 ProximalPromoter P208878 ProximalPromoter Unique Tile chr15:101832587-101833401 (-) NM_031170 - 247 101832340 16691 Krt8 AA960620|AL022697|AU019895|Card2|EndoA|K8|Krt-2.8|Krt2-8|MGC118110 keratin 8 MGI:96705 Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618; Mm.289759; Mm.358618 15 15 F3|15 58.86 cM KRT8 3856 NM_016879 - 516 101832071 53622 Krt85 0 tattctctggggtctcccttttc tgggatctctgacctaagctgtc 2 15 18 1.1.1.2.18.15 BCBC-5A-0 14093478 P001607 Blank P001607 Buffer Control Negative Blank 2 15 19 1.1.1.2.19.15 BCBC-5A-0 14093137 P100474 Rela ProximalPromoter P100474 ProximalPromoter Unique Tile chr19:5636385-5637410 (+) NM_009045 + 79 5637489 19697 Rela p65 v-rel reticuloendotheliosis viral oncogene homolog A (avian) MGI:103290 Mm.249966 19 19 B1-3|19 0.5 cM RELA 5970 NM_011379 - 26210 5663620 20469 Sipa1 0 ggagcatcctggagtcagaga agtttggtgatgtcaccctgg 2 16 1 1.1.1.2.1.16 BCBC-5A-0 14093156 P101596 Sap30bp ProximalPromoter P101596 ProximalPromoter Unique Tile chr11:115748729-115749719 (+) NM_020483 + 29 115749748 57230 Sap30bp 2700016D05Rik|Hcngp SAP30 binding protein MGI:1927479 Mm.267810; Mm.393253; Mm.267810; Mm.393253; Mm.267810; Mm.393253; Mm.267810; Mm.393253; Mm.267810; Mm.393253; Mm.267810; Mm.393253; Mm.267810; Mm.393253; Mm.267810; Mm.393253; Mm.267810; Mm.393253; Mm.267810; Mm.393253 11 - SAP30BP 29115 NM_130454 - 367 115749096 170472 Recql5 0 acccactagctttggtcacga aatttaggggcgagaaaacca 2 16 2 1.1.1.2.2.16 BCBC-5A-0 14093175 P102357 Hoxb6 ProximalPromoter P102357 ProximalPromoter Unique Tile chr11:96114113-96115025 (+) NM_008269 + 235 96115260 15414 Hoxb6 Hox-2.2 homeo box B6 MGI:96187 Mm.215 11 11 D|11 56.03 cM HOXB6 3216 NM_008268 + 4576 96119601 15413 Hoxb5 0 gggattcttgctacatcatttgg cgcacaaacctatcaaccttttc 2 16 3 1.1.1.2.3.16 BCBC-5A-0 14093194 P103479 Htra2 ProximalPromoter P103479 ProximalPromoter Unique Tile chr6:83020257-83021254 (-) NM_019752 - 28 83020229 64704 Htra2 AI481710|Omi|Prss25|mnd2 HtrA serine peptidase 2 MGI:1928676 Mm.21880 6 6 C3|6 34.75 cM HTRA2 27429 NM_007517 + 53 83020310 11993 Aup1 0 tcttgagtgactccaccaactcc acacacatacacacacattcccc 2 16 4 1.1.1.2.4.16 BCBC-5A-0 14093213 P104319 Hmgb2 DistalPromoter P104319 DistalPromoter Unique Tile chr8:60401252-60403119 (+) NM_008252 + 898 60404017 97165 Hmgb2 C80539|HMG-2|Hmg2|MGC103184 high mobility group box 2 MGI:96157 Mm.279998 8 8 B2 HMGB2 3148 NM_021788 - 21253 60379999 60406 Sap30 0 tatcatcaaggtgggaaacatgg tgttttctacccccagcaacttt 2 16 5 1.1.1.2.5.16 BCBC-5A-0 14093232 P104685 Hsd17b1 DistalPromoter P104685 DistalPromoter Unique Tile chr11:100891589-100893697 (+) NM_010475 + 803 100894500 15485 Hsd17b1 17HSDB1|17beta-HSD|E2DH|Hsd17ba hydroxysteroid (17-beta) dehydrogenase 1 MGI:105077 Mm.188939 11 11 D|11 60.25 cM HSD17B1 3292 NM_027896 + 5017 100898714 71743 Coasy 0 ttcagacacaccagaagagggag caagtctggagtggaagaaagca 2 16 6 1.1.1.2.6.16 BCBC-5A-0 14093251 P107462 Hadh2 DistalPromoter P107462 DistalPromoter Unique Tile chrX:147339013-147341208 (+) NM_016763 + 1403 147342611 15108 Hadh2 17bHSD10|Ads9|ERAB|Hsd17b10 hydroxyacyl-Coenzyme A dehydrogenase type II MGI:1333871 Mm.6994 X X F3 HADH2 3028 NM_025660 - 15797 147357005 66611 Ribc1 1 taggggaaagattgaaggagctg caactttgacccttgtgttctgg 2 16 7 1.1.1.2.7.16 BCBC-5A-0 14093270 P105995 Pde4a DistalPromoter P105995 DistalPromoter Unique Tile chr9:20944049-20946070 (+) NM_019798;NM_183408; + 1372 20947442 18577 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific MGI:99558 Mm.191749 9 9 A3 PDE4A 5141 NM_016679 - 43138 20989208 50868 Keap1 0 ggatccaatgccttcttatggac cagaaggacccacatacacttgc 2 16 8 1.1.1.2.8.16 BCBC-5A-0 14093289 P001152 Blank P001152 Buffer Control Negative Blank 2 16 9 1.1.1.2.9.16 BCBC-5A-0 14093308 P202879 ProximalPromoter P202879 ProximalPromoter Unique Tile chr1:73458569-73459497 (-) 0 aaccaaaccccatgaatacttcc ccacttttgatcttcaccacctc 2 16 10 1.1.1.2.10.16 BCBC-5A-0 14093327 P201892 Rnf41 ProximalPromoter P201892 ProximalPromoter Unique Tile chr10:127813542-127814459 (+) NM_026259 + 146 127814605 67588 Rnf41 2210404G21Rik|4930511A05Rik|4933415P08Rik|D10Ertd722e|FLRF ring finger protein 41 MGI:1914838 Mm.294120 10 10 D3|10 72.0 cM NM_027257 - 797 127812745 69917 Obfc2b 1 agaggtaggcggatctcttgagt ttcttaggacggacagtgtagcc 2 16 11 1.1.1.2.11.16 BCBC-5A-0 14093346 P205161 Agtrap ProximalPromoter P205161 ProximalPromoter Unique Tile chr4:146932104-146933081 (-) NM_009642 - 301 146931803 11610 Agtrap AT1R|Atrap|D4Wsu124e angiotensin II, type I receptor-associated protein MGI:1339977 Mm.46247 4 4 E1|4 76.4 cM AGTRAP 57085 NM_027426 - 41398 146974479 70433 2610109H07Rik 0 tgtcctgactgaatgtcttccaa gtgtggtaacagttggtgtctgc 2 16 12 1.1.1.2.12.16 BCBC-5A-0 14093365 P204458 Gip ProximalPromoter P204458 ProximalPromoter Unique Tile chr11:95841619-95842682 (+) NM_008119 + 2038 95840644 14607 Gip MGC129268|MGC129269 gastric inhibitory polypeptide MGI:107504 Mm.248452 11 11 D GIP 2695 NM_033568 + 8324 95851006 27681 Snf8 0 aggggtggttagagaggaaagtg agagaagggaaggctagggaaat 2 16 13 1.1.1.2.13.16 BCBC-5A-0 14093384 P204924 Scin ProximalPromoter P204924 ProximalPromoter Unique Tile chr12:40644712-40645742 (-) NM_009132 - 106 40644606 20259 Scin AW545522|adseverin scinderin MGI:1306794 Mm.2416 12 12 B1 SCIN 85477 0 taatggcttgctagggagttctg ccagtttggaccaagttaaccaa 2 16 14 1.1.1.2.14.16 BCBC-5A-0 14093403 P206940 Wdr46 ProximalPromoter P206940 ProximalPromoter Unique Tile chr17:33550202-33551160 (+) NM_020603 + 16 33551176 57315 Wdr46 2310007I04Rik|Bing4|C78447|C78559 WD repeat domain 46 MGI:1931871 Mm.2437 17 17 B1 WDR46 9277 NM_010385 - 397 33550763 14976 H2-Ke2 0 ctccttcacgatattgttttccg actcccttgagtagtagctcggc 2 16 15 1.1.1.2.15.16 BCBC-5A-0 14093422 P202355 AI593442 ProximalPromoter P202355 ProximalPromoter Unique Tile chr9:52439084-52440012 (-) NM_177907;NM_178906; - 113 52439197 330941 AI593442 E130102D23|MGC130101 expressed sequence AI593442 MGI:2143099 Mm.335160 9 9 A5.3 LOC399947 399947 2 ttgttcctccttccttccttttc tcactttccaaaacagctccttc 2 16 16 1.1.1.2.16.16 BCBC-5A-0 14093441 P209324 Fblim1 ProximalPromoter P209324 ProximalPromoter End Repeat Tile chr4:140868232-140869278 (-) NM_133754 - 205 140868027 74202 Fblim1 2410043F08Rik|Cal|Gt10 filamin binding LIM protein 1 MGI:1921452 Mm.286536 4 4 E1 FBLIM1 54751 NM_145987 - 20822 140890100 213989 BC025833 1 agccaggaagggagagagagata gtgtgtgtgtgtgtgtgtgtgtg 2 16 17 1.1.1.2.17.16 BCBC-5A-0 14093460 P208902 Ogfr ProximalPromoter P208902 ProximalPromoter Unique Tile chr2:180517693-180518595 (+) NM_031373 + 273 180518868 72075 Ogfr 2010013E17Rik opioid growth factor receptor MGI:1919325 Mm.250418; Mm.423361; Mm.250418; Mm.423361; Mm.250418; Mm.423361; Mm.250418; Mm.423361; Mm.250418; Mm.423361; Mm.250418; Mm.423361; Mm.250418; Mm.423361; Mm.250418; Mm.423361; Mm.250418; Mm.423361; Mm.250418; Mm.423361 2 2 H4 OGFR 11054 NM_028479 + 5515 180512178 73247 1600027N09Rik 0 ggccacacttgaaggtcataaac tttcacttccctgcagactatcc 2 16 18 1.1.1.2.18.16 BCBC-5A-0 14093479 P001703 Blank P001703 Buffer Control Negative Blank 2 16 19 1.1.1.2.19.16 BCBC-5A-0 14093138 P100780 Brd2 ProximalPromoter P100780 ProximalPromoter Unique Tile chr17:33729985-33731058 (-) NM_001025387;NM_010238; - 852 33730837 14312 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg1|KIAA4005|NAT|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 MGI:99495 Mm.3444 17 17 D|17 18.53 cM BRD2 6046 NM_010386 + 15023 33746081 14998 H2-DMa 1 ttgcttttgccatctgacctt cacaaactccagttccaaggc 2 17 1 1.1.1.2.1.17 BCBC-5A-0 14093157 P101620 Gcs1 ProximalPromoter P101620 ProximalPromoter Unique Tile chr6:83080061-83081016 (+) NM_020619 + 147 83081163 57377 Gcs1 1810017N02Rik|AI181835 glucosidase 1 MGI:1929872 Mm.28188 6 6 D1 GCS1 7841 NM_026744 + 5309 83074752 68499 Mrpl53 0 tccaggaggaacggaagtaca tggcattctgagcctcttctc 2 17 2 1.1.1.2.2.17 BCBC-5A-0 14093176 P102381 Irf2 ProximalPromoter P102381 ProximalPromoter Unique Tile chr8:48237583-48238637 (+) NM_008391 + 46 48238591 16363 Irf2 9830146E22Rik|AI646973|Irf-2|MGC117893 interferon regulatory factor 2 MGI:96591 Mm.1149 8 8 B2 IRF2 3660 1 ataggtactgggccctcttcttg actaaaagttagtccccggcttg 2 17 3 1.1.1.2.3.17 BCBC-5A-0 14093195 P103503 Pde4b ProximalPromoter P103503 ProximalPromoter Unique Tile chr4:101751548-101752524 (+) NM_019840 + 410 101752934 18578 Pde4b Dpde4|R74983|TCRB|dunce phosphodiesterase 4B, cAMP specific MGI:99557 Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017; Mm.20181; Mm.393017 4 4 C6|4 46.8 cM PDE4B 5142 0 gttccttccctaaggtttgcagt ggatttgcactaaattcgtgagg 2 17 4 1.1.1.2.4.17 BCBC-5A-0 14093214 P104253 Mapre1 DistalPromoter P104253 DistalPromoter Unique Tile chr2:153444524-153446534 (+) NM_007896 + 13718 153432816 13589 Mapre1 5530600P05Rik|AI462499|AI504412|AW260097|BIM1p|D2Ertd459e|Eb1 microtubule-associated protein, RP/EB family, member 1 MGI:891995 Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773; Mm.143877; Mm.430773 2 2 H1|2 84.0 cM MAPRE1 22919 NM_177849 + 25785 153472319 329541 A630008I04 0 gtgcacttgaaattagtgccctg gggatccaatgtccttttctgac 2 17 5 1.1.1.2.5.17 BCBC-5A-0 14093233 P104709 Ly86 DistalPromoter P104709 DistalPromoter Unique Tile chr13:37350065-37351919 (+) NM_010745 + 891 37352810 17084 Ly86 MD-1|MD1 lymphocyte antigen 86 MGI:1321404 Mm.2639 13 13 A3.3 LY86 9450 0 gggttttcatgacattagcctcc accccactctatgcagttcatca 2 17 6 1.1.1.2.6.17 BCBC-5A-0 14093252 P105754 Emcn DistalPromoter P105754 DistalPromoter Unique Tile chr3:137275691-137277543 (+) NM_016885 + 960 137278503 59308 Emcn 0610012K22Rik|AI315669|Muc14 endomucin MGI:1891716 Mm.27343 3 3 G3 EMCN 51705 0 cagcatgtggtcctctgtcttct gtgtgtgcaatggtgtcaatgtt 2 17 7 1.1.1.2.7.17 BCBC-5A-0 14093271 P106017 Rnuxa DistalPromoter P106017 DistalPromoter Unique Tile chr18:56695104-56696913 (+) NM_019996 + 1466 56698379 56698 Rnuxa 2810055C14Rik|4933427L19Rik|AU018701|AU018854|D18Ertd65e|Phax|p55 RNA U, small nuclear RNA export adaptor MGI:1891839 Mm.214569 18 18 D3|18 29.0 cM RNUXA 51808 NM_138600 - 1326 56698239 110695 Aldh7a1 0 tggaacttgctctgtagtcctcg aagcaactgactgtcttcatgcc 2 17 8 1.1.1.2.8.17 BCBC-5A-0 14093290 P203608 Osbpl11 ProximalPromoter P203608 ProximalPromoter Unique Tile chr16:33103545-33104583 (+) NM_176840 + 234 33104817 106326 Osbpl11 9430097N02Rik|AI132306|AU019795|ORP-11 oxysterol binding protein-like 11 MGI:2146553 Mm.26564 16 16 B3 OSBPL11 114885 0 acacgcctttaatctaagccaca ccttgccttttaagggaacctaa 2 17 9 1.1.1.2.9.17 BCBC-5A-0 14093309 P202903 Arsb ProximalPromoter P202903 ProximalPromoter Unique Tile chr13:94871123-94872210 (+) NM_009712 + 301 94872511 11881 Arsb As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B MGI:88075 Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946; Mm.300178; Mm.427946 13 13 C3-D1|13 50.0 cM ARSB 411 1 tgggactgtaatcccagttctgt gctccttttatccccagaagaaa 2 17 10 1.1.1.2.10.17 BCBC-5A-0 14093328 P201917 Il17re ProximalPromoter P201917 ProximalPromoter Unique Tile chr6:113423283-113424220 (+) NM_001034029;NM_145826;NM_001034031; + 40 113424260 57890 Il17re AA589509|IL-17RE interleukin 17 receptor E MGI:1889371 Mm.131781 6 6 E3 IL17RE 132014 NM_134159 + 13063 113437283 171095 Il17rc 0 aggtcctgtctcaaaacaagtcg ctgacgataaagaagtggttggg 2 17 11 1.1.1.2.11.17 BCBC-5A-0 14093347 P205185 Aplp2 ProximalPromoter P205185 ProximalPromoter Unique Tile chr9:30961407-30962349 (-) NM_009691 - 27 30961380 11804 Aplp2 AI790698 amyloid beta (A4) precursor-like protein 2 MGI:88047 Mm.19133 9 9 A2-B|9 13.0 cM APLP2 334 2 ggtggtacataaatcacccgcta gttttacatcgaccggaactgac 2 17 12 1.1.1.2.12.17 BCBC-5A-0 14093366 P204392 Fen1 ProximalPromoter P204392 ProximalPromoter Unique Tile chr19:10270925-10271941 (-) NM_007999 - 7 10270918 14156 Fen1 AW538437 flap structure specific endonuclease 1 MGI:102779 Mm.2952 19 19 A FEN1 2237 NM_146094 + 20853 10250072 76267 Fads1 0 taaacaattatgtcccccttccc cgttctttcagtatcgttcccag 2 17 13 1.1.1.2.13.17 BCBC-5A-0 14093385 P204948 Sh3bp1 ProximalPromoter P204948 ProximalPromoter Unique Tile chr15:78726220-78727178 (+) NM_009164 + 138 78727040 20401 Sh3bp1 3BP-1 SH3-domain binding protein 1 MGI:104603 Mm.4462 15 15 E1 SH3BP1 23616 NM_020271 + 13995 78741173 57028 Pdxp 2 catatcaaggcctgacaagaagg gtgcaactgcctcttcatcatct 2 17 14 1.1.1.2.14.17 BCBC-5A-0 14093404 P206965 Lancl1 ProximalPromoter P206965 ProximalPromoter End Repeat Tile chr1:66972315-66973251 (-) NM_021295 - 242 66972073 14768 Lancl1 AW124738|Gpr69|Gpr69a|p40 LanC (bacterial lantibiotic synthetase component C)-like 1 MGI:1336997 Mm.20522 1 - LANCL1 10314 0 gtgtgtgtgtgtgtgtgtgtgtg accgttttcaagtctacacaccg 2 17 15 1.1.1.2.15.17 BCBC-5A-0 14093423 P202379 Fmr1 ProximalPromoter P202379 ProximalPromoter Unique Tile chrX:64938114-64939030 (+) NM_008031 + 189 64939219 14265 Fmr1 FMRP|Fmr-1 fragile X mental retardation syndrome 1 homolog MGI:95564 Mm.3451 X X A7.1|X 24.5 cM FMR1 2332 0 ctcgcatagcaaatgttttaccc gtactaagtctggctgcctgtgc 2 17 16 1.1.1.2.16.17 BCBC-5A-0 14093442 P209439 Tubg2 ProximalPromoter P209439 ProximalPromoter Unique Tile chr11:100971070-100972024 (+) NM_134028 + 22 100972002 103768 Tubg2 AI504772|Tubgl tubulin, gamma 2 MGI:2144208 Mm.347365 11 11 D TUBG2 27175 NM_146030 - 15368 100987392 217198 Plekhh3 0 ggggttctgtttggttgatactg gggcatcattttctctcttagca 2 17 17 1.1.1.2.17.17 BCBC-5A-0 14093461 P208927 Tsga14 ProximalPromoter P208927 ProximalPromoter Unique Tile chr6:30643770-30644770 (-) NM_031998 - 78 30643692 83922 Tsga14 1700017E11Rik|2810431D15Rik|AI449046|AI503610 testis specific gene A14 MGI:1891414 Mm.65389 6 6 A3.3 TSGA14 95681 NM_008590 + 43302 30688072 17294 Mest 1 agcaggttcctgaagttgctatg ctccctgtaacctctcttccgat 2 17 18 1.1.1.2.18.17 BCBC-5A-0 14093480 P001703 Blank P001703 Buffer Control Negative Blank 2 17 19 1.1.1.2.19.17 BCBC-5A-0 14093139 P100804 Gsta4 ProximalPromoter P100804 ProximalPromoter Unique Tile chr9:77982343-77983419 (+) NM_010357 + 5704 77977715 14860 Gsta4 5.7|GST|GST 5.7|mGsta4 glutathione S-transferase, alpha 4 MGI:1309515 Mm.2662 9 9 E1 GSTA4 2941 NM_008181 + 32950 78016369 14857 Gsta1 0 ttctggatccttgccaaaaga ccaccaaggcgtcacattatt 2 18 1 1.1.1.2.1.18 BCBC-5A-0 14093158 P101554 Suclg1 ProximalPromoter P101554 ProximalPromoter Unique Tile chr6:73177080-73178077 (+) NM_019879 + 104 73178181 56451 Suclg1 1500000I01Rik|Sucla1 succinate-CoA ligase, GDP-forming, alpha subunit MGI:1927234 Mm.29845 6 6 C3 SUCLG1 8802 0 ggtccatgagttcaattccca acgctcctcggagtctcttct 2 18 2 1.1.1.2.2.18 BCBC-5A-0 14093177 P102405 Kif5b ProximalPromoter P102405 ProximalPromoter Unique Tile chr18:6241390-6242478 (-) NM_008448 - 108 6241498 16573 Kif5b AL022807|KHC kinesin family member 5B MGI:1098268 Mm.223744 18 18 1.0 cM KIF5B 3799 1 ggttttctcagatatgtcacccg cttcttttcttttcgggaaggac 2 18 3 1.1.1.2.3.18 BCBC-5A-0 14093196 P103527 Trim44 ProximalPromoter P103527 ProximalPromoter Unique Tile chr2:102202062-102203159 (-) NM_020267 - 323 102201739 80985 Trim44 Dipb|MGC102054|Mc7 tripartite motif-containing 44 MGI:1931835 Mm.315002 2 2 E2 TRIM44 54765 NM_010218 - 49472 102252631 14221 Fjx1 0 acccccactcctctcaaagatag gtcaacctgaccgaaaaccacta 2 18 4 1.1.1.2.4.18 BCBC-5A-0 14093215 P104277 DistalPromoter P104277 DistalPromoter No Hits Tile 1 gtgaacgttttgaacgaatgagc ctggtccacatgtacagacctcc 2 18 5 1.1.1.2.5.18 BCBC-5A-0 14093234 P104823 Trim28 DistalPromoter P104823 DistalPromoter Unique Tile chr7:11920992-11922997 (+) NM_011588 + 1333 11924330 21849 Trim28 AA408787|KAP-1|KRIP-1|MGC102100|Tif1b|Tif1beta tripartite motif protein 28 MGI:109274 Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345; Mm.15701; Mm.398345 7 7 A2 TRIM28 10155 NM_001024699 - 11013 11909979 232879 Zfp499 0 cagcgggcatctaggaatagact accaagaccccaaagtacaagga 2 18 6 1.1.1.2.6.18 BCBC-5A-0 14093253 P107504 Bhlhb2 DistalPromoter P107504 DistalPromoter Unique Tile chr6:108623284-108625389 (+) NM_011498 + 1016 108626405 20893 Bhlhb2 C130042M06Rik|CR8|Clast5|Dec1|Sharp2|Stra13|Stra14 basic helix-loop-helix domain containing, class B2 MGI:1097714 Mm.2436 6 6 E-F1 BHLHB2 8553 1 tttatgctctgttggggacagaa cctggctagtcaagcacagaaag 2 18 7 1.1.1.2.7.18 BCBC-5A-0 14093272 P106039 Kcne3 DistalPromoter P106039 DistalPromoter Unique Tile chr7:100052276-100054447 (+) NM_020574 + 1660 100052787 57442 Kcne3 2210017H05Rik|MiRP2 potassium voltage-gated channel, Isk-related subfamily, gene 3 MGI:1891124 Mm.282386 7 7 F1 KCNE3 10008 NM_026010 + 18912 100033364 67164 2610209A20Rik 1 tgagtgtagaatcacctccccaa ctcctttggaaacccagacactt 2 18 8 1.1.1.2.8.18 BCBC-5A-0 14093291 P203632 BC034076 ProximalPromoter P203632 ProximalPromoter Unique Tile chr2:31258773-31259814 (+) NM_177649 + 256 31260070 227712 BC034076 D030068H01|MGC31312|MGC49669 cDNA sequence BC034076 MGI:2677838 Mm.80703 2 2 B NM_007494 + 32464 31292278 11898 Ass1 0 tgctgtttgttgttattgttggg acctttgggagtcattccttagc 2 18 9 1.1.1.2.9.18 BCBC-5A-0 14093310 P202837 4631426J05Rik ProximalPromoter P202837 ProximalPromoter Unique Tile chr7:132155667-132156751 (-) NM_029935 - 169 132155498 77590 4631426J05Rik BRAG|mKIAA0598 RIKEN cDNA 4631426J05 gene MGI:1924840 Mm.213582 7 7 F4 GALNAC4S-6ST 51363 0 cctcttaaacagcaacctgcact tcgcccagcaagtaaatacagtt 2 18 10 1.1.1.2.10.18 BCBC-5A-0 14093329 P201942 D3Bwg0562e ProximalPromoter P201942 ProximalPromoter Unique Tile chr3:117352841-117353859 (-) NM_177664 - 39 117352880 229791 D3Bwg0562e A330086D10|PRG-1|mKIAA0455 DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed MGI:106530 Mm.140138 3 3 G1|3 55.0 cM LPPR4 9890 2 caggtaaaataaagaggtggggg cctgcatctgaagagaaagggta 2 18 11 1.1.1.2.11.18 BCBC-5A-0 14093348 P205209 Bcl2l11 ProximalPromoter P205209 ProximalPromoter Unique Tile chr2:127816244-127817215 (+) NM_009754;NM_207680;NM_207681; + 263 127817478 12125 Bcl2l11 Bim|Bod BCL2-like 11 (apoptosis facilitator) MGI:1197519 Mm.141083 2 2 F3-G1 BCL2L11 10018 2 ctgcaagaaaaggctacgtccta ccatcctccactcagaatgtacc 2 18 12 1.1.1.2.12.18 BCBC-5A-0 14093367 P204416 Fprl1 ProximalPromoter P204416 ProximalPromoter Unique Tile chr17:17591457-17592491 (+) NM_008042 + 22 17592469 14294 Fprl1 LXA4-R|Lxa4r formyl peptide receptor-like 1 MGI:1194495 Mm.430766 17 17 A3.2 FPRL1 2358 NM_008039 + 50 17592441 14289 Fpr-rs2 0 atttgcttgtgcctgtagagacc tcttcggttcctgtggtgtaaat 2 18 13 1.1.1.2.13.18 BCBC-5A-0 14093386 P206819 Ngef ProximalPromoter P206819 ProximalPromoter Unique Tile chr1:89341773-89342704 (-) NM_019867 - 256 89341517 53972 Ngef Tims2|ephexin neuronal guanine nucleotide exchange factor MGI:1858414 Mm.143717 1 1 D|1 54.0 cM NGEF 25791 0 caaataaaacaaccctcccttcc cagtgggtcgtttttcatagctc 2 18 14 1.1.1.2.14.18 BCBC-5A-0 14093405 P206989 Gsdm1 ProximalPromoter P206989 ProximalPromoter Unique Tile chr11:98479194-98480230 (+) NM_021347 + 210 98480440 57911 Gsdm1 BB149167|Gsdm|H312E gasdermin 1 MGI:1889509 Mm.86870 11 11 D GSDM1 284110 NM_029727 + 16280 98462914 76758 Gsdm2 0 agaggcagaacaaagtgtggaag aaagaagggggactgaaagtttg 2 18 15 1.1.1.2.15.18 BCBC-5A-0 14093424 P202403 E230019M04Rik ProximalPromoter P202403 ProximalPromoter Unique Tile chrX:135408078-135409092 (+) NM_177921 + 150 135409242 331537 E230019M04Rik - RIKEN cDNA E230019M04 gene MGI:3607720 Mm.328336 X X F1 1 gctcctggatagacccactctct agctaagtaggtcgactcgggtt 2 18 16 1.1.1.2.16.18 BCBC-5A-0 14093443 P209463 ProximalPromoter P209463 ProximalPromoter Unique Tile chr14:120718950-120720000 (-) 0 cagcccgatagcttcagtcttta attatgcccatgatcagctagga 2 18 17 1.1.1.2.17.18 BCBC-5A-0 14093462 P208860 Acox3 ProximalPromoter P208860 ProximalPromoter Unique Tile chr5:35899086-35900039 (+) NM_030721 + 119 35899920 80911 Acox3 BI685180|EST-s59|PCOX acyl-Coenzyme A oxidase 3, pristanoyl MGI:1933156 Mm.291503 5 - ACOX3 8310 NM_175208 - 5585 35905624 74364 4931431C16Rik 0 ttatgagttcatgacccatgtgc aaacccttcctgtctggaatctc 2 18 18 1.1.1.2.18.18 BCBC-5A-0 14093481 P001799 Cy3 Anchor P001799 Anchor Control Positive Cy3 Anchor 2 18 19 1.1.1.2.19.18 BCBC-5A-0 14093140 P100828 Hpca ProximalPromoter P100828 ProximalPromoter Unique Tile chr4:128621210-128622116 (-) NM_010471 - 148 128621062 15444 Hpca - hippocalcin MGI:1336200 Mm.384452 4 4 D2-D3 HPCA 3208 NM_025452 + 13291 128607919 66260 Tmem54 0 catgtgtggtggaggcaagta cagatcacacagcctgcactc 2 19 1 1.1.1.2.1.19 BCBC-5A-0 14093159 P101578 0610031J06Rik ProximalPromoter P101578 ProximalPromoter Unique Tile chr3:88410036-88411135 (+) NM_020003 + 149 88410986 56700 0610031J06Rik AB027141|NCU-G1 RIKEN cDNA 0610031J06 gene MGI:1913318 Mm.256034 3 3 F1 C1orf85 112770 NM_024246 - 9225 88420360 71913 Tmem79 0 agcctccattcctgtttggtt cccttacctggcgagtctctt 2 19 2 1.1.1.2.2.19 BCBC-5A-0 14093178 P102711 Bub1b ProximalPromoter P102711 ProximalPromoter Unique Tile chr2:118288876-118289836 (+) NM_009773 + 117 118289719 12236 Bub1b AU045529|BUBR1|MGC36092 budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae) MGI:1333889 Mm.29133 2 2 E5 BUB1B 701 NM_138313 - 47757 118241119 171543 Bmf 0 tagccaaggctacacagagaacc tgctaactgagtctccctcaacc 2 19 3 1.1.1.2.3.19 BCBC-5A-0 14093197 P103551 Gcs1 ProximalPromoter P103551 ProximalPromoter Unique Tile chr6:83079871-83080776 (+) NM_020619 + 387 83081163 57377 Gcs1 1810017N02Rik|AI181835 glucosidase 1 MGI:1929872 Mm.28188 6 6 D1 GCS1 7841 NM_026744 + 5119 83074752 68499 Mrpl53 1 gaagctggaggatcaaaagttca ctccacacgtttacacacacaca 2 19 4 1.1.1.2.4.19 BCBC-5A-0 14093216 P104301 Grb2 DistalPromoter P104301 DistalPromoter Unique Tile chr11:115516985-115518938 (-) NM_008163 - 7538 115524523 14784 Grb2 AA408164|Ash growth factor receptor bound protein 2 MGI:95805 Mm.383426 11 11 E2|11 75.0 cM GRB2 2885 0 taatcgtagcacctgagcggata gttcttcacggtcaccccttagt 2 19 5 1.1.1.2.5.19 BCBC-5A-0 14093235 P104847 Vnn1 DistalPromoter P104847 DistalPromoter Unique Tile chr10:23581204-23583269 (+) NM_011704 + 1006 23584275 22361 Vnn1 V-1 vanin 1 MGI:108395 Mm.27154 10 10 A1-B2 VNN1 8876 NM_053205 + 26552 23609821 111174 Taar1 0 actatagcgggaagctttagggg ctcctctgcacaccttctgacat 2 19 6 1.1.1.2.6.19 BCBC-5A-0 14093254 P107448 Nes DistalPromoter P107448 DistalPromoter Unique Tile chr3:88053567-88055701 (+) NM_016701 + 1318 88057019 18008 Nes AA166324|C78523|ESTM46 nestin MGI:101784 Mm.331129 3 3 F1|3 42.5 cM NES 10763 NM_007759 + 18906 88034661 12904 Crabp2 0 agcgaagaatatcaaggtggagc gcacctgtacacacacacacaca 2 19 7 1.1.1.2.7.19 BCBC-5A-0 14093273 P106061 Cdon DistalPromoter P106061 DistalPromoter Unique Tile chr9:35199016-35200843 (+) NM_021339 + 903 35201746 57810 Cdon CDO|Cd0|MGC129383|Orcam cell adhesion molecule-related/down-regulated by oncogenes MGI:1926387 Mm.80509 9 9 A4 CDON 50937 1 gctagcctgtaatcccagcactt agggagagaaggaaggacagaca 2 19 8 1.1.1.2.8.19 BCBC-5A-0 14093292 P203657 A230050P20Rik ProximalPromoter P203657 ProximalPromoter Unique Tile chr9:20617983-20618882 (+) NM_175687 + 215 20619097 319278 A230050P20Rik - RIKEN cDNA A230050P20 gene MGI:2441788 Mm.249932 9 9 A3 FLJ11286 55337 NM_145154 - 11208 20630090 70726 Angptl6 0 aagtctacaagggtgtaaggggc actctcagcctcagtttcctcct 2 19 9 1.1.1.2.9.19 BCBC-5A-0 14093311 P202861 Foxj3 ProximalPromoter P202861 ProximalPromoter Unique Tile chr4:119036240-119037326 (+) NM_172699 + 293 119037619 230700 Foxj3 C330039G02Rik|DKFZp761E2211|mKIAA1041 forkhead box J3 MGI:2443432 Mm.259227 4 4 D2.1 FOXJ3 22887 NM_001004178 - 461 119036701 433752 AA415398 0 tctggagagactgtcaatagccc gattccaactcctgaggaatgc 2 19 10 1.1.1.2.10.19 BCBC-5A-0 14093330 P202445 Chn1 ProximalPromoter P202445 ProximalPromoter Unique Tile chr2:73461476-73462413 (-) NM_029716;NM_175752; - 263 73461213 108699 Chn1 0610007I19Rik|0710001E19Rik|1700112L09Rik|2900046J01Rik|AI413815|ARHGAP2 chimerin (chimaerin) 1 MGI:1915674 Mm.257073 2 2 C3 0 ccaggtccttgtacattccagac gaggaaatcagcacataccaagg 2 19 11 1.1.1.2.11.19 BCBC-5A-0 14093349 P205233 Nr1i3 ProximalPromoter P205233 ProximalPromoter Unique Tile chr1:173049855-173050854 (+) NM_009803 + 159 173050695 12355 Nr1i3 AA209988|AI551208|CAR|CAR1|CAR2|Care2|ESTM32|MB67|MGC107281|mCAR nuclear receptor subfamily 1, group I, member 3 MGI:1346307 Mm.3077 1 1 H3|1 92.6 cM NR1I3 9970 NM_001037170 - 8005 173058859 641376 Tomm40l 0 tggatttcagcaagaaagctagg acctacctgtttcccttaggcag 2 19 12 1.1.1.2.12.19 BCBC-5A-0 14093368 P204440 Gap43 ProximalPromoter P204440 ProximalPromoter Unique Tile chr16:42259810-42260772 (-) NM_008083 - 88 42259898 14432 Gap43 B-50|Basp2|GAP-43 growth associated protein 43 MGI:95639 Mm.1222 16 16 B4|16 29.5 cM GAP43 2596 1 gtgtgtgtgtgtgtgtgtagcgt tggttcttctcatacagcacagc 2 19 13 1.1.1.2.13.19 BCBC-5A-0 14093387 P206843 Mpp6 ProximalPromoter P206843 ProximalPromoter Unique Tile chr6:50038691-50039596 (+) NM_019939 + 366 50039962 56524 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) MGI:1927340 Mm.41288 6 6 B2.3 MPP6 51678 0 aacgctctacaaagtccccctac ttatagcacaaaggagacgcgag 2 19 14 1.1.1.2.14.19 BCBC-5A-0 14093406 P206922 Slurp1 ProximalPromoter P206922 ProximalPromoter Unique Tile chr15:74555343-74556357 (-) NM_020519 - 62 74555281 57277 Slurp1 1110021N19Rik|AI415082|ARS|ArsB|MGC130552|Slurp-1 secreted Ly6/Plaur domain containing 1 MGI:1930923 Mm.27630 15 15 D3 SLURP1 57152 NM_026671 - 5211 74561568 68311 Lypd2 0 ccaaccacccacctattgttaaa ggaccagagtgactcagtaggga 2 19 15 1.1.1.2.15.19 BCBC-5A-0 14093425 P202427 Lss ProximalPromoter P202427 ProximalPromoter Unique Tile chr10:75974273-75975347 (+) NM_146006 + 5 75975342 16987 Lss 2810025N20Rik|BC029082|D10Ertd116e|MGC27893 lanosterol synthase MGI:1336155 Mm.55075 10 10 C1|10 41.1 cM LSS 4047 NM_029661 + 30640 76005987 76573 1700027D21Rik 2 gggaaggtgtgtgagtgttcttt agccctttacctgacagcctagt 2 19 16 1.1.1.2.16.19 BCBC-5A-0 14093444 P209487 Tnfaip8 ProximalPromoter P209487 ProximalPromoter Unique Tile chr18:50177559-50178862 (+) NM_134131 + 13 50178849 106869 Tnfaip8 AA987150|E130304C20Rik|Gg2-1|Nded|Ssc-2 tumor necrosis factor, alpha-induced protein 8 MGI:2147191 Mm.27740 18 18 D1 TNFAIP8 25816 0 agagctctatctatggcatcccc gaggctcctagacgagtgagatg 2 19 17 1.1.1.2.17.19 BCBC-5A-0 14093463 P208884 Gm1103 ProximalPromoter P208884 ProximalPromoter Unique Tile chr10:5993274-5994218 (-) NM_001033466 + 35786 5958432 381990 Gm1103 - gene model 1103, (NCBI) MGI:2685949 Mm.262466 10 10 A1 0 cttccagaggtcctgagttcaaa tctgttcgattatttccggtgtt 2 19 18 1.1.1.2.18.19 BCBC-5A-0 14093482 P001895 Cy3 Anchor P001895 Anchor Control Positive Cy3 Anchor 2 19 19 1.1.1.2.19.19 BCBC-5A-0 14093483 P100192 Ddx3x ProximalPromoter P100192 ProximalPromoter Unique Tile chrX:12447855-12448877 (+) NM_010028 + 703 12449580 13205 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked MGI:103064 Mm.289662 X X A1.1|X 42.0 cM DDX3X 1654 0 ttcaggtcttgccacctcatt gccaaggtttgattttagccc 3 1 1 1.1.1.3.1.1 BCBC-5A-0 14093502 P101032 Tes ProximalPromoter P101032 ProximalPromoter Unique Tile chr6:17044493-17045455 (+) NM_011570;NM_207176; + 30229 17015226 21753 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript MGI:105081 Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719 6 6 A2|6 1.5 cM TES 26136 2 tggttggtggtttagtccctg ctcaggccagctgagctacat 3 1 2 1.1.1.3.2.1 BCBC-5A-0 14093521 P101782 D4Wsu53e ProximalPromoter P101782 ProximalPromoter Unique Tile chr4:134194262-134195183 (+) NM_023665 + 532 134195715 27981 D4Wsu53e 2700043I21Rik|D4Ucla2 DNA segment, Chr 4, Wayne State University 53, expressed MGI:106498 Mm.331964 4 4 D3|4 65.7 cM NM_027935 - 7270 134186992 71817 Tmem50a 0 tcagacactccagaagagggc cacagaggacaagtcggttcc 3 1 3 1.1.1.3.3.1 BCBC-5A-0 14093540 P102915 Kcnma1 ProximalPromoter P102915 ProximalPromoter Unique Tile chr14:22792859-22793824 (-) NM_010610 - 377 22792482 16531 Kcnma1 MaxiK|Slo|Slo1|mSlo|mSlo1 potassium large conductance calcium-activated channel, subfamily M, alpha member 1 MGI:99923 Mm.343607 14 14 A3 KCNMA1 3778 1 atctagctgacaaccagccactc tgtgcggagatatatacagccaa 3 1 4 1.1.1.3.4.1 BCBC-5A-0 14093559 P103665 Nde1 ProximalPromoter P103665 ProximalPromoter Unique Tile chr16:14082196-14083165 (+) NM_023317 + 113 14083052 67203 Nde1 2810027M15Rik|AU042936|AW822251|Nude|mNudE nuclear distribution gene E homolog 1 (A nidulans) MGI:1914453 Mm.24105 16 16 A1 NDE1 54820 0 tctgtctttccggtgtctttctc tgcaggactgacctctgtttgta 3 1 5 1.1.1.3.5.1 BCBC-5A-0 14093578 P104409 Pcx DistalPromoter P104409 DistalPromoter Unique Tile chr19:4591161-4592964 (+) NM_008797 + 1393 4594357 18563 Pcx Pc pyruvate carboxylase MGI:97520 Mm.1845 19 19 A|19 0.0 cM PC 5091 NM_153388 - 21868 4614832 225875 Lrfn4 0 ggttttctgtctggaaggaggaa ggtgtttccaattacagcccttc 3 1 6 1.1.1.3.6.1 BCBC-5A-0 14093597 P104955 DistalPromoter P104955 DistalPromoter Unique Tile chrX:162195553-162197412 (+) 0 gggtcatgttcatgttttaccca gtggcgggggagagtatagtaga 3 1 7 1.1.1.3.7.1 BCBC-5A-0 14093616 P105321 Mesdc2 DistalPromoter P105321 DistalPromoter Unique Tile chr7:83765018-83766870 (+) NM_023403 + 1571 83768441 67943 Mesdc2 2210015O11Rik|AW537813|MGC25959|mKIAA0081 mesoderm development candiate 2 MGI:1891421 Mm.117365 7 7 D3 MESDC2 23184 NM_030705 - 4547 83760471 80889 Mesdc1 2 cctcaaggagacaggaaaggaaa tggctaacctggaactcactctg 3 1 8 1.1.1.3.8.1 BCBC-5A-0 14093635 P106495 Nkx6-1 DistalPromoter P106495 DistalPromoter Unique Tile chr5:101906369-101908346 (-) NM_144955 - 1356 101905013 18096 Nkx6-1 NKX6A|Nkx6.1 NK6 transcription factor related, locus 1 (Drosophila) MGI:1206039 Mm.193072 5 5 E4 NKX6-1 4825 0 gtagagccttgccctctccaata tcctgcgtggtgtctaaacctaa 3 1 9 1.1.1.3.9.1 BCBC-5A-0 14093654 P203572 Gprc5c ProximalPromoter P203572 ProximalPromoter Unique Tile chr11:114667097-114668041 (+) NM_147217 + 103 114668144 70355 Gprc5c 1110028I06Rik|3200002M13Rik|MGC11976|MGC6786 G protein-coupled receptor, family C, group 5, member C MGI:1917605 Mm.242413 11 11 E2 GPRC5C 55890 NM_170758 + 38089 114706130 217303 Cd300a 0 cttccctatttctgcggtttctt tccaggtacgagcaatcctaatc 3 1 10 1.1.1.3.10.1 BCBC-5A-0 14093673 P202777 ProximalPromoter P202777 ProximalPromoter Unique Tile chr12:109467464-109468488 (+) 1 tcttcagccttttgagtttggtc gccatataaaagcaggtcacagg 3 1 11 1.1.1.3.11.1 BCBC-5A-0 14093692 P203815 Trem2 ProximalPromoter P203815 ProximalPromoter Unique Tile chr17:47811064-47812049 (+) NM_031254 + 19 47812068 83433 Trem2 Trem2a|Trem2b|Trem2c triggering receptor expressed on myeloid cells 2 MGI:1913150 Mm.261623 17 17 C TREM2 54209 NM_027763 + 13433 47825482 71326 Treml1 0 ctcagctcttcagaggaaactgg aaagagatgaccaagccagtcag 3 1 12 1.1.1.3.12.1 BCBC-5A-0 14093711 P201270 Garnl3 ProximalPromoter P201270 ProximalPromoter Unique Tile chr2:32909083-32910088 (-) NM_178888 - 130 32909213 99326 Garnl3 AW120551 GTPase activating RANGAP domain-like 3 MGI:2139309 Mm.41290 2 2 B GARNL3 84253 0 tgatgcctcttacagtgcatgat ctcggtaccttttcatccttcct 3 1 13 1.1.1.3.13.1 BCBC-5A-0 14093730 P205324 Cyp2d10 ProximalPromoter P205324 ProximalPromoter Unique Tile chr15:82235185-82236237 (-) NM_010005 - 239 82234946 13101 Cyp2d10 AI303445|Cyp2d|P450-2D cytochrome P450, family 2, subfamily d, polypeptide 10 MGI:88602 Mm.174372 15 15 E1|15 47.2 cM NM_019823 - 27259 82207926 56448 Cyp2d22 0 ctttgtaaaattcccccttgacc aaattcatcgggtttgctactca 3 1 14 1.1.1.3.14.1 BCBC-5A-0 14093749 P201602 A530016O06Rik ProximalPromoter P201602 ProximalPromoter Unique Tile chr12:37750702-37751792 (+) NM_178767 + 252 37752044 319660 A530016O06Rik AI790538 RIKEN cDNA A530016O06 gene MGI:2442495 Mm.211255 12 12 A3 FLJ16237 392636 0 tagccagacactccctgaaactc ctatctgagaagcaatgggcagt 3 1 15 1.1.1.3.15.1 BCBC-5A-0 14093768 P206056 Sgcd ProximalPromoter P206056 ProximalPromoter Unique Tile chr11:47223045-47224144 (-) NM_011891 - 320 47222725 24052 Sgcd 35kDa|delta-SG sarcoglycan, delta (dystrophin-associated glycoprotein) MGI:1346525 Mm.338890 11 11 B1.2 SGCD 6444 0 ctgaatacacacacacactggca tgggttcacactcacagaaagaa 3 1 16 1.1.1.3.16.1 BCBC-5A-0 14093787 P200196 Cntd1 ProximalPromoter P200196 ProximalPromoter Unique Tile chr11:101094355-101095296 (+) NM_026562 + 4 101095292 68107 Cntd1 1700051C09Rik|4921513J16Rik|5430417M23Rik|Cntd|MGC11788 cyclin N-terminal domain containing 1 MGI:1923965 Mm.178947; Mm.262369; Mm.178947; Mm.262369; Mm.178947; Mm.262369; Mm.178947; Mm.262369; Mm.178947; Mm.262369 11 11 D CNTD1 124817 NM_026618 - 258 101095038 52469 Ccdc56 0 cagtgatgctgtaagaccaccag ttctatatgtttgccctcgcttc 3 1 17 1.1.1.3.17.1 BCBC-5A-0 14093806 P210666 Podn ProximalPromoter P210666 ProximalPromoter Unique Tile chr4:107529906-107530901 (-) NM_172874 - 116 107530022 242608 Podn 9430070G18|Pcan|SLRR5A podocan MGI:2674939 Mm.74710 4 4 C7 PODN 127435 1 gggaaataatcttcctttgcagg ccaagttttgttgtgggttctct 3 1 18 1.1.1.3.18.1 BCBC-5A-0 14093825 P207927 1110055J05Rik ProximalPromoter P207927 ProximalPromoter Unique Tile chr3:92805960-92806910 (-) NM_026394 - 207 92805753 67828 1110055J05Rik - RIKEN cDNA 1110055J05 gene MGI:1915078 Mm.158176 3 3 F1 NM_026811 - 11483 92794477 68694 1110031B11Rik 0 ccatgagagagatgtcctggtct gggaattgcattcctagatcctt 3 1 19 1.1.1.3.19.1 BCBC-5A-0 14093484 P100216 Gh ProximalPromoter P100216 ProximalPromoter Unique Tile chr11:106118240-106119159 (-) NM_008117 - 340 106117900 14599 Gh - growth hormone MGI:95707 Mm.343934 11 11 D|11 65.0 cM GH1 2688 NM_008339 - 11460 106130619 15985 Cd79b 1 gtttcccacatcagccagaag gcaacagagcctctccaagaa 3 2 1 1.1.1.3.1.2 BCBC-5A-0 14093503 P100966 Taf9 ProximalPromoter P100966 ProximalPromoter Unique Tile chr13:101750259-101751174 (-) NM_027139;NM_027592;NM_001015889; + 462 101751636 108143 Taf9 2310012M09Rik|2810046E22Rik|4921516M08Rik|AA673500|AU045423|MGC117979|Taf2g TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor MGI:1888697 Mm.301148 13 13 D1 TAF9 6880 NM_011233 - 83 101751091 19356 Rad17 1 aatatcccagaggcgtgaggt atggctcagcggttaagaaca 3 2 2 1.1.1.3.2.2 BCBC-5A-0 14093522 P101806 Slc16a3 ProximalPromoter P101806 ProximalPromoter Unique Tile chr11:120779088-120780074 (-) NM_001038653;NM_030696;NM_001038654; + 14918 120765156 80879 Slc16a3 Mct3|Mct4 solute carrier family 16 (monocarboxylic acid transporters), member 3 MGI:1933438 Mm.28632 11 11 E2 SLC16A3 9123 NM_139059;NM_027874; - 27335 120807409 104318 Csnk1d 0 gttatgtgcacccaaatgcct acttccttctgcctcctttgg 3 2 3 1.1.1.3.3.2 BCBC-5A-0 14093541 P102939 Mmp7 ProximalPromoter P102939 ProximalPromoter Unique Tile chr9:7691244-7692180 (+) NM_010810 + 80 7692100 17393 Mmp7 MAT matrix metallopeptidase 7 MGI:103189 Mm.4825 9 9 A1|9 1.0 cM MMP7 4316 0 acacacgtaagttatgcagggct agcagacacacaaagcagaacag 3 2 4 1.1.1.3.4.2 BCBC-5A-0 14093560 P103689 Pex13 ProximalPromoter P103689 ProximalPromoter Unique Tile chr11:23566186-23567130 (-) NM_023651 - 250 23565936 72129 Pex13 2610008O20Rik peroxisomal biogenesis factor 13 MGI:1919379 Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536; Mm.286622; Mm.29536 11 11 A3.3 PEX13 5194 NM_001033654;NM_028304;NM_028956; + 18 23566168 74467 4933435A13Rik 0 tatgtggattacaggggagagga ttaaggctagcagtaaagcccct 3 2 5 1.1.1.3.5.2 BCBC-5A-0 14093579 P104523 Phlda1 DistalPromoter P104523 DistalPromoter Unique Tile chr10:110906839-110908786 (+) NM_009344 + 1609 110910395 21664 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology-like domain, family A, member 1 MGI:1096880 Mm.3117 10 10 D1 PHLDA1 22822 NM_015781 + 21661 110885178 53605 Nap1l1 2 gctgcagcctaaggtgaagtttt tccctctggctgtttcacaatta 3 2 6 1.1.1.3.6.2 BCBC-5A-0 14093598 P104979 Clic4 DistalPromoter P104979 DistalPromoter Unique Tile chr4:134546341-134548257 (-) NM_013885 - 1505 134544836 29876 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) MGI:1352754 Mm.257765 4 4 D3 CLIC4 25932 0 cgccatagtagcttggttctcct acacacacacacacacacaccag 3 2 7 1.1.1.3.7.2 BCBC-5A-0 14093617 P105345 Zfp289 DistalPromoter P105345 DistalPromoter Unique Tile chr2:91062795-91064813 (+) NM_023854 + 1307 91066120 77038 Zfp289 2310032E02Rik zinc finger protein 289 MGI:1924288 Mm.43636 2 2 E1 ZNF289 84364 NM_028733;NM_030880; + 4628 91058167 80708 Pacsin3 0 cctgaggagatagcttggttggt gagtccctggctttcttcgtcta 3 2 8 1.1.1.3.8.2 BCBC-5A-0 14093636 P106517 Tfb1m DistalPromoter P106517 DistalPromoter Unique Tile chr17:3515445-3517482 (-) NM_146074 - 1250 3514195 224481 Tfb1m AI429207|MGC41387 transcription factor B1, mitochondrial MGI:2146851 Mm.226554 17 17 A1 TFB1M 51106 0 aaatccccacatgacaggaagat aaacggaaggcttactcatcagg 3 2 9 1.1.1.3.9.2 BCBC-5A-0 14093655 P203505 LOC545471 ProximalPromoter P203505 ProximalPromoter Unique Tile chr2:150161802-150162751 (-) NM_001034900 - 14702 150176504 545471 LOC545471 - similar to KRAB zinc finger protein 6D 2 2 G3 0 ctctgtgtagtcctggctgtcct gagtgggatattgcctcaaacac 3 2 10 1.1.1.3.10.2 BCBC-5A-0 14093674 P202801 Klhl15 ProximalPromoter P202801 ProximalPromoter Unique Tile chrX:90486418-90487378 (+) NM_001039060;NM_001039061;NM_001039059;NM_153165; + 270 90487648 236904 Klhl15 6330500C13Rik|MGC47138 kelch-like 15 (Drosophila) MGI:1923400 Mm.238117 X X C3 KLHL15 80311 NM_012010 - 21048 90465370 26905 Eif2s3x 0 agagacaggggaagcaaagagat gtttaccttccccctggttga 3 2 11 1.1.1.3.11.2 BCBC-5A-0 14093693 P203839 Slc33a1 ProximalPromoter P203839 ProximalPromoter Unique Tile chr3:64052810-64053721 (-) NM_015728 - 148 64052662 11416 Slc33a1 AI315656|AI788741|Acatn|D630022N01Rik solute carrier family 33 (acetyl-CoA transporter), member 1 MGI:1332247 Mm.135619 3 3 E1-E3 SLC33A1 9197 NM_001033300 + 10350 64064071 229363 Gmps 0 agactaggtgtggtggctcatgt ctaggccttggtgataacattgc 3 2 12 1.1.1.3.12.2 BCBC-5A-0 14093712 P201294 Asah2 ProximalPromoter P201294 ProximalPromoter Unique Tile chr19:32174269-32175367 (-) NM_018830 - 5132 32169137 54447 Asah2 AI585898 N-acylsphingosine amidohydrolase 2 MGI:1859310 Mm.104900 19 19 C3 ASAH2 56624 0 cccttactccccaagttgtttct ctcaggcactgacaagcagtaag 3 2 13 1.1.1.3.13.2 BCBC-5A-0 14093731 P205733 Pnliprp2 ProximalPromoter P205733 ProximalPromoter Unique Tile chr19:58811933-58812860 (+) NM_011128 + 118 58812978 18947 Pnliprp2 PLRP2 pancreatic lipase-related protein 2 MGI:1336202 Mm.212333 19 19 D2 PNLIPRP2 5408 NM_018874 + 29709 58782224 18946 Pnliprp1 0 gactgatctgtagctggagccat cctcccagagtttaatgatcgtg 3 2 14 1.1.1.3.14.2 BCBC-5A-0 14093750 P201626 Txnrd3 ProximalPromoter P201626 ProximalPromoter Unique Tile chr6:89608317-89609363 (+) NM_153162 + 265 89609628 232223 Txnrd3 AI196535|TR2|Tgr thioredoxin reductase 3 MGI:2386711 Mm.229332 6 6 D1 TXNRD3 114112 NM_025351 - 47061 89561256 66098 Chchd6 0 gggttgcaagtgaaaaagatttg gaggcctctctacagttccttcc 3 2 15 1.1.1.3.15.2 BCBC-5A-0 14093769 P206081 Esrrb ProximalPromoter P206081 ProximalPromoter Unique Tile chr12:87250038-87251001 (+) NM_011934 + 782 87250219 26380 Esrrb ERRb|Err2|Estrrb|Nr3b2 estrogen related receptor, beta MGI:1346832 Mm.235550 12 12 D2|12 41.0 cM ESRRB 2103 0 aactttcgtggaaagcacttgag cactgagccgagtacgaactttt 3 2 16 1.1.1.3.16.2 BCBC-5A-0 14093788 P200220 1810009J06Rik ProximalPromoter P200220 ProximalPromoter Unique Tile chr6:40928899-40929973 (-) NM_023707 + 35595 40894378 73626 1810009J06Rik - RIKEN cDNA 1810009J06 gene MGI:1920876 Mm.425319 6 6 B1 NM_023333 - 35143 40965116 67373 2210010C04Rik 0 tgattctggtaacatgccttcct atagtgttgactgcccgctttta 3 2 17 1.1.1.3.17.2 BCBC-5A-0 14093807 P210600 Ces5 ProximalPromoter P210600 ProximalPromoter Unique Tile chr8:107814472-107815539 (+) NM_172759 + 120 107815419 234673 Ces5 9030624L02Rik carboxylesterase 5 MGI:2443170 Mm.26580 8 8 D3 NM_197999 + 35329 107850868 72361 2210023G05Rik 2 tgccagggttctttgtgattatt tgaatgactctcaccttgcacat 3 2 18 1.1.1.3.18.2 BCBC-5A-0 14093826 P207952 Cs ProximalPromoter P207952 ProximalPromoter Unique Tile chr10:127739692-127740594 (+) NM_026444 + 171 127740765 12974 Cs 2610511A05Rik|9030605P22Rik|Cis citrate synthase MGI:88529 Mm.58836 10 10 D3 CS 1431 NM_019953 + 14057 127725635 56530 Tmem4 0 atttgaggcttggtggttacaga gagcctttgacagatgttatcgc 3 2 19 1.1.1.3.19.2 BCBC-5A-0 14093485 P100240 Gyk ProximalPromoter P100240 ProximalPromoter Unique Tile chrX:82029118-82030044 (-) NM_212444;NM_008194; - 223 82029341 14933 Gyk D930012N15Rik|GK glycerol kinase MGI:106594 Mm.246682 X X C-D|X 33.0 cM GK 2710 0 ccgggtatttccttcatggtt ctgagaagatgtcaccccagg 3 3 1 1.1.1.3.1.3 BCBC-5A-0 14093504 P100990 Rps7 ProximalPromoter P100990 ProximalPromoter Unique Tile chr12:29222814-29223808 (-) NM_011300 - 621 29222193 20115 Rps7 S7 ribosomal protein S7 MGI:1333818 Mm.279839 12 12 C1 RPS7 6201 NM_011275 + 12107 29235915 19819 Rnaseh1 0 gacacaccagaagagggcatc atgtccaggaacccctgtctt 3 3 2 1.1.1.3.2.3 BCBC-5A-0 14093523 P102123 Pzp ProximalPromoter P102123 ProximalPromoter Unique Tile chr6:128492192-128493272 (-) NM_007376 - 122 128492314 11287 Pzp A1m|A2m|AI893533|MAM pregnancy zone protein MGI:87854 Mm.260144 6 6 F1-G3|6 62.0 cM PZP 5858 0 acataaaaagaccaggcaagcag gcttacggttttgcagtagctgt 3 3 3 1.1.1.3.3.3 BCBC-5A-0 14093542 P102963 Nkx3-1 ProximalPromoter P102963 ProximalPromoter Unique Tile chr14:68142898-68143854 (+) NM_010921 + 167 68144021 18095 Nkx3-1 Bax|NKX3.1|NKX3A|Nkx-3.1|bagpipe NK-3 transcription factor, locus 1 (Drosophila) MGI:97352 Mm.3520 14 14 D1|14 30.0 cM NKX3-1 4824 NM_010920 + 17550 68125348 18092 Nkx2-6 0 aaaaatcagcgtaggctttcctc ctgatgagcccttaacctttcct 3 3 4 1.1.1.3.4.3 BCBC-5A-0 14093561 P103713 Cmtm3 ProximalPromoter P103713 ProximalPromoter Unique Tile chr8:107228715-107229804 (+) NM_024217 + 11 107229815 68119 Cmtm3 9430096L06Rik|AI413895|BNAS2|Cklfsf3 CKLF-like MARVEL transmembrane domain containing 3 MGI:2447162 Mm.390108 8 8 D3 CMTM3 123920 NM_028524 + 17253 107211462 75502 Cmtm2b 1 aaaatagaggaagatgggcaagc gcggaagaagaaaaagtggagtt 3 3 5 1.1.1.3.5.3 BCBC-5A-0 14093580 P104547 Tspyl1 DistalPromoter P104547 DistalPromoter Unique Tile chr10:33968220-33970190 (+) NM_009433 + 1468 33971658 22110 Tspyl1 Tspyl testis-specific protein, Y-encoded-like 1 MGI:1298395 Mm.20445 10 10 B1 TSPYL1 7259 NM_030203 + 16697 33986887 72480 Tspyl4 1 tttggttttatggtgaaggagca tcttgctaggcgtgttatttcca 3 3 6 1.1.1.3.6.3 BCBC-5A-0 14093599 P104913 Add1 DistalPromoter P104913 DistalPromoter Unique Tile chr5:34887120-34889386 (+) NM_001024458;NM_013457; + 1282 34890668 11518 Add1 AI256389 adducin 1 (alpha) MGI:87918 Mm.289106 5 5 B2|5 20.0 cM ADD1 118 NM_011893 + 20576 34866544 24055 Sh3bp2 2 tctaagttcttttcccagcaccc attttctttggcagaggcaactc 3 3 7 1.1.1.3.7.3 BCBC-5A-0 14093618 P105369 Grpel1 DistalPromoter P105369 DistalPromoter Unique Tile chr5:36778844-36780703 (+) NM_024478 + 1574 36782277 17713 Grpel1 AA408748|MGC8152|mt-GrpE#1|mt-Grpel1 GrpE-like 1, mitochondrial MGI:1334417 Mm.21535 5 5 B3 GRPEL1 80273 NM_025725 + 20979 36801682 66717 Ccdc96 0 cagtgatggggactctaggcttt tggattgagtctatggcacttgg 3 3 8 1.1.1.3.8.3 BCBC-5A-0 14093637 P106539 Scn3b DistalPromoter P106539 DistalPromoter Unique Tile chr9:40016972-40019504 (+) NM_153522;NM_178227; + 283 40019787 235281 Scn3b 1110001K16Rik|4833414B02Rik|Scnb3 sodium channel, voltage-gated, type III, beta MGI:1918882 Mm.290083 9 9 A5.1 SCN3B 55800 2 agggatctgatctccacttctgg gagggacacatctctttgaagca 3 3 9 1.1.1.3.9.3 BCBC-5A-0 14093656 P203530 5330431N19Rik ProximalPromoter P203530 ProximalPromoter Unique Tile chr19:45612803-45613793 (+) NM_172639 + 120 45613913 226162 5330431N19Rik - RIKEN cDNA 5330431N19 gene MGI:1924407 Mm.21978 19 19 C3 RP11-529I10.4 25911 NM_020032 - 61 45613854 56626 Poll 0 gccacaggttaggtcacttctgt agtttatttctctttgccgggag 3 3 10 1.1.1.3.10.3 BCBC-5A-0 14093675 P201456 Il2ra ProximalPromoter P201456 ProximalPromoter Unique Tile chr2:11559609-11560542 (+) NM_008367 + 160 11560702 16184 Il2ra CD25|Il2r|Ly-43|MGC130561 interleukin 2 receptor, alpha chain MGI:96549 Mm.915 2 2 A2-A3|2 6.4 cM IL2RA 3559 NM_152824 - 38557 11521052 76938 Rbm17 0 tcacaagcatttgtctgaaatgg caattactaggaggtgtgggcag 3 3 11 1.1.1.3.11.3 BCBC-5A-0 14093694 P203863 B4galt7 ProximalPromoter P203863 ProximalPromoter Unique Tile chr13:55608278-55609311 (+) NM_146045 + 206 55609517 218271 B4galt7 MGC28643 xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) MGI:2384987 Mm.139825 13 13 B1 B4GALT7 11285 NM_026211 + 5482 55602796 67511 Tmed9 0 gactgatcttccagaggtcctga gatctcggaagactgattgtgct 3 3 12 1.1.1.3.12.3 BCBC-5A-0 14093713 P201318 9430071P14Rik ProximalPromoter P201318 ProximalPromoter Unique Tile chr6:37976619-37977578 (-) NM_177200 - 15 37976604 320590 9430071P14Rik - RIKEN cDNA 9430071P14 gene MGI:2444335 Mm.197449 6 6 B1 0 gaagacctgccaactctatcgaa tctgaactcaccttttagagcgg 3 3 13 1.1.1.3.13.3 BCBC-5A-0 14093732 P205757 Lgmn ProximalPromoter P205757 ProximalPromoter Unique Tile chr12:102824642-102825730 (-) NM_011175 - 16105 102840747 19141 Lgmn AEP|AI746452|AU022324|Prsc1 legumain MGI:1330838 Mm.17185 12 12 E LGMN 5641 NM_013747 + 44511 102870241 27277 Golga5 0 aatctttaactcttccccctccc cggtaattataccagccattgga 3 3 14 1.1.1.3.14.3 BCBC-5A-0 14093751 P201560 Polr2b ProximalPromoter P201560 ProximalPromoter Unique Tile chr5:78384211-78385111 (+) NM_153798 + 164 78385275 231329 Polr2b MGC47046|POL2RB|RPB140|RPB2 polymerase (RNA) II (DNA directed) polypeptide B MGI:2388280 Mm.273217 5 5 D POLR2B 5431 NM_019836 - 278 78384833 56412 2610024G14Rik 0 gctcacaagctccaggtactgat gaaagtttcttgctgcgtgtttt 3 3 15 1.1.1.3.15.3 BCBC-5A-0 14093770 P206105 Chst4 ProximalPromoter P206105 ProximalPromoter Unique Tile chr8:112928514-112929438 (-) NM_011998 - 31 112928483 26887 Chst4 GST-3 carbohydrate (chondroitin 6/keratan) sulfotransferase 4 MGI:1349479 Mm.89207 8 - CHST4 10164 NM_175480 + 39452 112968890 234725 Zfp612 0 tattgcataaaattggacagggg tctgactcatgaactcctcctcc 3 3 16 1.1.1.3.16.3 BCBC-5A-0 14093789 P200244 D8Bwg1414e ProximalPromoter P200244 ProximalPromoter Unique Tile chr8:114763419-114764327 (-) NM_025781 - 71 114763348 66817 D8Bwg1414e 9030409E16Rik|AA403674 DNA segment, Chr 8, Brigham & Women's Genetics 1414 expressed MGI:106426 Mm.345350; Mm.507; Mm.345350; Mm.507; Mm.345350; Mm.507; Mm.345350; Mm.507; Mm.345350; Mm.507; Mm.345350; Mm.507; Mm.345350; Mm.507; Mm.345350; Mm.507; Mm.345350; Mm.507; Mm.345350; Mm.507; Mm.345350; Mm.507 8 8 D3|8 55.0 cM LOC124491 124491 NM_011801 - 22436 114740983 23837 Cfdp1 2 ggaactcaggtcacagctcctaa aatcgtttctccttccaatcaca 3 3 17 1.1.1.3.17.3 BCBC-5A-0 14093808 P210624 Kcnh5 ProximalPromoter P210624 ProximalPromoter Unique Tile chr12:76096319-76097284 (-) NM_172805 - 147 76096172 238271 Kcnh5 6430546I09 potassium voltage-gated channel, subfamily H (eag-related), member 5 MGI:3584508 Mm.44465 12 12 C3 KCNH5 27133 0 gagagcactttaaaggccagtga agccagatggaatatgagagcag 3 3 18 1.1.1.3.18.3 BCBC-5A-0 14093827 P207970 Ssxb1 ProximalPromoter P207970 ProximalPromoter Duplication Tile chrX:7572716-7573811 (+) NM_026492 + 3548 7570263 67985 Ssxb1 4930414C09Rik synovial sarcoma, X member B, breakpoint 1 MGI:1915235 Mm.298030 X X A1.1 NM_001001450 - 44874 7618685 387132 Ssxb2 0 tcctaaccaccaactctcccata ttgttctttaacaggcagcacaa 3 3 19 1.1.1.3.19.3 BCBC-5A-0 14093486 P100264 Hmgb3 ProximalPromoter P100264 ProximalPromoter Unique Tile chrX:67817623-67818663 (+) NM_008253 + 58 67818605 15354 Hmgb3 Hmg2a|Hmg4 high mobility group box 3 MGI:1098219 Mm.336087 X X A1 HMGB3 3149 1 cagacactttctttcaccccg gcataagcagacatcttgccc 3 4 1 1.1.1.3.1.4 BCBC-5A-0 14093505 P101014 ProximalPromoter P101014 ProximalPromoter No Hits Tile 0 tgttaggaggaaacctggggt aggatggaatggaaggctcat 3 4 2 1.1.1.3.2.4 BCBC-5A-0 14093524 P102147 Arntl ProximalPromoter P102147 ProximalPromoter Unique Tile chr7:112997734-112998733 (+) NM_007489 + 27 112998706 11865 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bmal1b' aryl hydrocarbon receptor nuclear translocator-like MGI:1096381 Mm.12177 7 7 F2-F3|7 52.0 cM ARNTL 406 NM_177248 + 32201 113030934 320743 A630005I04Rik 0 ctttcccgctcctttgatacttt gtccctgacctactttctgcctt 3 4 3 1.1.1.3.3.4 BCBC-5A-0 14093543 P102897 ProximalPromoter P102897 ProximalPromoter No Hits Tile 0 agttggttccctttgaagactcc atgagaaagaatacctctggggg 3 4 4 1.1.1.3.4.4 BCBC-5A-0 14093562 P103737 Mrpl17 ProximalPromoter P103737 ProximalPromoter Unique Tile chr7:105685166-105686212 (-) NM_025301 - 258 105684908 27397 Mrpl17 MRP-L26|Rpml26 mitochondrial ribosomal protein L17 MGI:1351608 Mm.44225 7 7 F1 MRPL17 63875 1 agggaacacacacacacacaaac gagtacctgaggagaactgcgtc 3 4 5 1.1.1.3.5.4 BCBC-5A-0 14093581 P104571 Akt1 DistalPromoter P104571 DistalPromoter Unique Tile chr12:113123451-113125503 (-) NM_009652 - 1367 113122084 11651 Akt1 Akt|PKB|PKB/Akt|PKBalpha thymoma viral proto-oncogene 1 MGI:87986 Mm.6645 12 12 F1-F2|12 57.0 cM AKT1 207 NM_013929 + 30732 113092719 30954 Siva 0 aaggcattctgggtagagacagc gactccttctgggtccacacttt 3 4 6 1.1.1.3.6.4 BCBC-5A-0 14093600 P104937 Pkd1 DistalPromoter P104937 DistalPromoter Unique Tile chr17:24274813-24276757 (+) NM_013630 + 792 24277549 18763 Pkd1 FLJ00285|MGC118471|PC-1|PC1|mFLJ00285 polycystic kidney disease 1 homolog MGI:97603 Mm.290442 17 17 A3.3|17 10.4 cM PKD1 5310 NM_153792 - 19383 24255430 224619 Traf7 2 gatctttcctttgcctcaccagt agcttccacttcgcaagtcttct 3 4 7 1.1.1.3.7.4 BCBC-5A-0 14093619 P105483 Zmynd19 DistalPromoter P105483 DistalPromoter Unique Tile chr2:24768571-24770450 (+) NM_026021 + 1360 24771810 67187 Zmynd19 2700064H14Rik|AA536891|AU014915|mizip zinc finger, MYND domain containing 19 MGI:1914437 Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712 2 2 A3 ZMYND19 116225 NM_178408 - 11399 24757172 215705 Arrdc1 1 ttgaaccttcctactcctgcctc ttaacgattgtgagcctccatgt 3 4 8 1.1.1.3.8.4 BCBC-5A-0 14093638 P106561 Fzd10 DistalPromoter P106561 DistalPromoter Unique Tile chr5:128912349-128914476 (+) NM_175284 + 1337 128915813 93897 Fzd10 Fz-10 frizzled homolog 10 (Drosophila) MGI:2136761 Mm.197628 5 5 G1.3 FZD10 11211 2 aagacaaacgttaaggagccagc cggactcttggctttggataaac 3 4 9 1.1.1.3.9.4 BCBC-5A-0 14093657 P203554 BC030396 ProximalPromoter P203554 ProximalPromoter Unique Tile chr15:57815050-57815989 (+) NM_173862 + 3 57815992 239463 BC030396 MGC40696 cDNA sequence BC030396 MGI:2447773 Mm.221241 15 15 D1 FAM83A 84985 NM_029418 - 48310 57864299 75758 9130401M01Rik 0 gggctgtgactctcctatcacac ttgcctacttggagaaatggttc 3 4 10 1.1.1.3.10.4 BCBC-5A-0 14093676 P201481 Chaf1b ProximalPromoter P201481 ProximalPromoter Unique Tile chr16:93771388-93772297 (+) NM_028083 + 143 93772440 110749 Chaf1b 2600017H24Rik|C76145|CAF-Ip60|CAF1|CAF1A|CAF1P60|MPHOSPH7 chromatin assembly factor 1, subunit B (p60) MGI:1314881 Mm.274222 16 16 C4|16 67.4 cM CHAF1B 8208 1 agaatgagtttcaggacagccag agctctgggctcttttctttctc 3 4 11 1.1.1.3.11.4 BCBC-5A-0 14093695 P203796 Olig2 ProximalPromoter P203796 ProximalPromoter Unique Tile chr16:91113558-91114508 (+) NM_016967 + 100 91114408 50913 Olig2 AI604895|Bhlhb1|Olg-2|Oligo2|RK17 oligodendrocyte transcription factor 2 MGI:1355331 Mm.37289 16 16 C3.3|16 63.0 cM OLIG2 10215 NM_016968 + 44119 91158627 50914 Olig1 0 cctgaaaatgaatgaggtggaag aattagatttgaggtgctcgctg 3 4 12 1.1.1.3.12.4 BCBC-5A-0 14093714 P201342 Slc45a3 ProximalPromoter P201342 ProximalPromoter Unique Tile chr1:133789417-133790511 (+) NM_145977 + 7643 133798154 212980 Slc45a3 2210413P12Rik|AU023994|AU043764|IPCA-6|MGC32471|PRST|Pcanap6|Prostein solute carrier family 45, member 3 MGI:1922082 Mm.200307 1 1 E4 SLC45A3 85414 NM_007923 + 44910 133835421 13714 Elk4 0 gcatttcctgggattctgtagtg aatctccaggttactcagtgggg 3 4 13 1.1.1.3.13.4 BCBC-5A-0 14093733 P205781 Rab33a ProximalPromoter P205781 ProximalPromoter Unique Tile chrX:44762813-44763821 (+) NM_011228 + 275 44764096 19337 Rab33a MGC129488|MGC129489|Rabs10 RAB33A, member of RAS oncogene family MGI:109493 Mm.2015 X X A4 RAB33A 9363 NM_012019 - 4760 44758053 26926 Pdcd8 0 tgatggttagtaagccttgggaa acactggagggagaaagcctaag 3 4 14 1.1.1.3.14.4 BCBC-5A-0 14093752 P201584 A430090L17Rik ProximalPromoter P201584 ProximalPromoter Unique Tile chr13:115272502-115273439 (-) NM_177004 - 32 115272470 319803 A430090L17Rik - RIKEN cDNA A430090L17 gene MGI:2442754 Mm.386896 13 13 D2.2 0 cctaacacgatgcctgagagact aagtttgcaggtgtcaaagaagg 3 4 15 1.1.1.3.15.4 BCBC-5A-0 14093771 P200973 Phka1 ProximalPromoter P200973 ProximalPromoter Unique Tile chrX:98847205-98848242 (-) NM_008832;NM_173021; - 288 98846917 18679 Phka1 5330411D17|9830108K24Rik|Phka phosphorylase kinase alpha 1 MGI:97576 Mm.212889 X X D|X 39.0 cM PHKA1 5255 2 gcctatagtctgagtgagggcaa ctgagagactgggactgaacgat 3 4 16 1.1.1.3.16.4 BCBC-5A-0 14093790 P200269 Mrpl3 ProximalPromoter P200269 ProximalPromoter Unique Tile chr9:104910203-104911139 (+) NM_053159 + 230 104911369 94062 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 MGI:2137204 Mm.29746 9 9 F1 MRPL3 11222 0 aggtagcaaggacagagtgatgc tgtgggaaaactcactgtgctaa 3 4 17 1.1.1.3.17.4 BCBC-5A-0 14093809 P210648 B230363K08Rik ProximalPromoter P210648 ProximalPromoter Unique Tile chr1:74869063-74869964 (-) NM_001039495 - 257 74868806 241116 B230363K08Rik A230051F10 RIKEN cDNA B230363K08 gene MGI:2444274 Mm.186404 1 1 C3 NM_010544 - 14894 74884858 16147 Ihh 0 cgtcatcacgttcaaagtacagc gcctgctcaaatttaatctccct 3 4 18 1.1.1.3.18.4 BCBC-5A-0 14093828 P207994 9430023L20Rik ProximalPromoter P207994 ProximalPromoter Unique Tile chr15:101111421-101112501 (+) NM_026566 + 147 101112354 68118 9430023L20Rik AA407441|AU022967 RIKEN cDNA 9430023L20 gene MGI:1915368 Mm.391998; Mm.89268; Mm.391998; Mm.89268; Mm.391998; Mm.89268; Mm.391998; Mm.89268; Mm.391998; Mm.89268; Mm.391998; Mm.89268; Mm.391998; Mm.89268; Mm.391998; Mm.89268; Mm.391998; Mm.89268 15 15 F3 C12orf44 60673 NM_001033182 + 8744 101121245 77717 6030408B16Rik 0 tttaggcgctaaaagcaactgac gacagaccaaaagcaaaaacagg 3 4 19 1.1.1.3.19.4 BCBC-5A-0 14093487 P100198 Folr2 ProximalPromoter P100198 ProximalPromoter Unique Tile chr7:101718102-101719139 (-) NM_008035 - 1036 101719138 14276 Folr2 FBP2|FR-P3|Folbp-2|Folbp2 folate receptor 2 (fetal) MGI:95569 Mm.2724 7 7 E2 FOLR2 2350 NM_010567 - 6205 101711897 16332 Inppl1 0 caaagcttctatgtggggctg cctgccaagttctccagattg 3 5 1 1.1.1.3.1.5 BCBC-5A-0 14093506 P101038 Timp3 ProximalPromoter P101038 ProximalPromoter Unique Tile chr10:85729751-85730517 (+) NM_011595 + 129 85730388 21859 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 MGI:98754 Mm.4871 10 10 C1-D1|10 47.0 cM TIMP3 7078 1 atggcaattaccacagccatc ggggaagtgccttccaagtag 3 5 2 1.1.1.3.2.5 BCBC-5A-0 14093525 P102171 Bmi1 ProximalPromoter P102171 ProximalPromoter Unique Tile chr2:18598404-18599310 (+) NM_007552 + 254 18599564 12151 Bmi1 AW546694|Bmi-1|Pcgf4 B lymphoma Mo-MLV insertion region 1 MGI:88174 Mm.289584 2 2 A3|2 9.0 cM BMI1 648 NM_147778 + 8189 18590215 12238 Commd3 1 ttccatggctcatccaatctact attcctggagcgagataaaaagg 3 5 3 1.1.1.3.3.5 BCBC-5A-0 14093544 P102921 Kpna2 ProximalPromoter P102921 ProximalPromoter Unique Tile chr11:106813824-106814888 (-) NM_010655 - 1703 106815527 16647 Kpna2 2410044B12Rik|IPOA1|MGC91246|Rch1 karyopherin (importin) alpha 2 MGI:103561 Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000; Mm.12508; Mm.391577; Mm.423000 11 11 E1 KPNA2 3838 2 gatggaaggccctataatggaac ccagggctatacagagaaaccct 3 5 4 1.1.1.3.4.5 BCBC-5A-0 14093563 P104043 Pkhd1l1 ProximalPromoter P104043 ProximalPromoter Unique Tile chr15:44286788-44287704 (+) NM_138674 + 78 44287626 192190 Pkhd1l1 AB055648|D86|PKHDL1 polycystic kidney and hepatic disease 1-like 1 MGI:2183153 Mm.211494 15 15 B3 PKHD1L1 93035 NM_175009 + 28602 44258186 223527 Eny2 0 agggggacagtcaaagactaagg gttacctttgtgggaatctgctg 3 5 5 1.1.1.3.5.5 BCBC-5A-0 14093582 P104595 Bmpr1a DistalPromoter P104595 DistalPromoter Unique Tile chr14:33291103-33292972 (-) NM_009758 - 1457 33289646 12166 Bmpr1a 1110037I22Rik|ALK3|AU045487|BMPR-IA|Bmpr bone morphogenetic protein receptor, type 1A MGI:1338938 Mm.237825 14 14 B|14 13.0 cM BMPR1A 657 0 ttggttctacaagcaccctacca gaagaaacacattatccagcccc 3 5 6 1.1.1.3.6.5 BCBC-5A-0 14093601 P104961 Tnfrsf12a DistalPromoter P104961 DistalPromoter Unique Tile chr17:23405933-23407955 (-) NM_013749 - 867 23405066 27279 Tnfrsf12a AI255180|C87282|Fn14|HPIP|TWEAK-R|TweakR tumor necrosis factor receptor superfamily, member 12a MGI:1351484 Mm.28518 17 17 A3.3 TNFRSF12A 51330 NM_018777 + 946 23407009 54419 Cldn6 0 ctccctatgttccaaggtctgct ggttggttgggtttttgttttgt 3 5 7 1.1.1.3.7.5 BCBC-5A-0 14093620 P105507 Slc25a37 DistalPromoter P105507 DistalPromoter Unique Tile chr14:68239942-68242043 (-) NM_026331 - 1509 68238433 67712 Slc25a37 1700020E22Rik|4930513O14Rik|4930526G11Rik|AI848481|C330015G08Rik|Mscp solute carrier family 25, member 37 MGI:1914962 Mm.293635 14 14 D1 SLC25A37 51312 NM_173420 - 5586 68247629 239167 D930020E02Rik 0 cctgtgcagggtgtgtctaaaac acattcggtaagaggggaaatga 3 5 8 1.1.1.3.8.5 BCBC-5A-0 14093639 P106503 Atpaf2 DistalPromoter P106503 DistalPromoter Unique Tile chr11:60234544-60236597 (-) NM_145427 - 1344 60233200 246782 Atpaf2 ATP12|ATP12p ATP synthase mitochondrial F1 complex assembly factor 2 MGI:2180561 Mm.41651 11 11 B2 ATPAF2 91647 NM_025757 + 907 60233637 66771 4933439F18Rik 0 cgggacaggtagaagatgaacct ccttaggagaactcagtcagccc 3 5 9 1.1.1.3.9.5 BCBC-5A-0 14093658 P203578 BC031593 ProximalPromoter P203578 ProximalPromoter Unique Tile chr15:101768212-101769145 (-) NM_146063 - 146 101768358 223917 BC031593 MGC36907 cDNA sequence BC031593 MGI:2385030 Mm.162744 15 15 F3 KRT6L 338785 NM_212487 - 13113 101782258 332131 Krt78 2 agggcattccttttctttctttg tagtggagaaagtctgcctggac 3 5 10 1.1.1.3.10.5 BCBC-5A-0 14093677 P201506 Tmem16e ProximalPromoter P201506 ProximalPromoter Unique Tile chr7:51377996-51379011 (+) NM_177694 + 36 51379047 233246 Tmem16e 9330162L24|Gdd1 transmembrane protein 16E MGI:3576659 Mm.254431; Mm.411727; Mm.254431; Mm.411727; Mm.254431; Mm.411727; Mm.254431; Mm.411727; Mm.254431; Mm.411727; Mm.254431; Mm.411727; Mm.254431; Mm.411727 7 7 B4 TMEM16E 203859 0 caagagtcttctgaaaccctgga aagagggaggagctagagacgag 3 5 11 1.1.1.3.11.5 BCBC-5A-0 14093696 P203821 Gja5 ProximalPromoter P203821 ProximalPromoter Unique Tile chr3:97117000-97117970 (+) NM_008121 + 150 97117820 14613 Gja5 5730555N10Rik|Cnx40|Cx40|Gja-5 gap junction membrane channel protein alpha 5 MGI:95716 Mm.281816; Mm.358911; Mm.281816; Mm.358911; Mm.281816; Mm.358911; Mm.281816; Mm.358911; Mm.281816; Mm.358911; Mm.281816; Mm.358911; Mm.281816; Mm.358911 3 3 F2.1|3 45.6 cM GJA5 2702 0 tgttactccatgtccttgaccct ctctggagaggcaagtctctgtc 3 5 12 1.1.1.3.12.5 BCBC-5A-0 14093715 P204470 Gpam ProximalPromoter P204470 ProximalPromoter Unique Tile chr19:55156250-55157149 (-) NM_008149 - 3553 55152697 14732 Gpam GPAT glycerol-3-phosphate acyltransferase, mitochondrial MGI:109162 Mm.210196 19 19 D2|19 52.0 cM GPAM 57678 0 tgaattttctaggcgtcggaata tcaaatcggcttctagctctttg 3 5 13 1.1.1.3.13.5 BCBC-5A-0 14093734 P205806 Rpa2 ProximalPromoter P205806 ProximalPromoter Unique Tile chr4:132039549-132040479 (+) NM_011284 + 43 132040436 19891 Rpa2 AA409079|AI325195|AU020965|Rf-A2 replication protein A2 MGI:1339939 Mm.2870 4 4 D2.3 RPA2 6118 NM_133888 - 10302 132029247 100340 Smpdl3b 0 aatgttcgaccaagtgcctacat aagaacacttgggaactctgtgc 3 5 14 1.1.1.3.14.5 BCBC-5A-0 14093753 P201608 Slc44a3 ProximalPromoter P201608 ProximalPromoter Unique Tile chr3:121522374-121523386 (+) NM_145394 - 1372 121523746 213603 Slc44a3 BC010552|MGC18084|MGC38127 solute carrier family 44, member 3 MGI:2384860 Mm.33062 3 3 G1 SLC44A3 126969 2 ttttgcagaagatgaaagaagcc tcatccatacccctcagtcaagt 3 5 15 1.1.1.3.15.5 BCBC-5A-0 14093772 P200997 Kazald1 ProximalPromoter P200997 ProximalPromoter Unique Tile chr19:45128219-45129249 (+) NM_178929 + 200 45129449 107250 Kazald1 AI842353|Bono1|IGFBP-rP10 Kazal-type serine peptidase inhibitor domain 1 MGI:2147606 Mm.24417 19 19 C3 KAZALD1 81621 NM_053197 + 27235 45100984 94280 Sfxn3 2 cttttccttttctagcttgccgt gtcacaatgagtgtacagagccg 3 5 16 1.1.1.3.16.5 BCBC-5A-0 14093791 P200202 Actrt1 ProximalPromoter P200202 ProximalPromoter Unique Tile chrX:42572668-42573623 (+) NM_028514 + 10 42573633 73360 Actrt1 1700061J02Rik|Arp-T1|MGC144637|MGC144638 actin-related protein T1 MGI:1920610 Mm.60929 X X A3.1 ACTRT1 139741 2 tcctccccagttacctaacaaca cccatgaatattgcctctttctg 3 5 17 1.1.1.3.17.5 BCBC-5A-0 14093810 P210673 ProximalPromoter P210673 ProximalPromoter Unique Tile chr5:142346119-142347133 (+) 0 cccaatagtagagttcttgccga aagtcaccataaacacgcacctt 3 5 18 1.1.1.3.18.5 BCBC-5A-0 14093829 P208018 BC061039 ProximalPromoter P208018 ProximalPromoter Unique Tile chr2:25039722-25040811 (+) NM_026624 + 57 25040754 68222 BC061039 4931415M17 cDNA sequence BC061039 MGI:3605773 Mm.425075 2 2 A3 LOC401565 401565 NM_146116 - 5832 25046643 227613 Tubb2c 0 gacccacaggcaaatgagataac atttgctttgactctgtccttgc 3 5 19 1.1.1.3.19.5 BCBC-5A-0 14093488 P100222 Gli3 ProximalPromoter P100222 ProximalPromoter Unique Tile chr13:15253529-15254519 (+) NM_008130 + 347 15254866 14634 Gli3 AI854843|AU023367|Bph|Pdn|Xt|add GLI-Kruppel family member GLI3 MGI:95729 Mm.391930; Mm.5098; Mm.391930; Mm.5098; Mm.391930; Mm.5098; Mm.391930; Mm.5098; Mm.391930; Mm.5098; Mm.391930; Mm.5098; Mm.391930; Mm.5098; Mm.391930; Mm.5098 13 13 A2|13 14.0 cM GLI3 2737 1 tggatggggagagagagatga cctccttccccaagttttcac 3 6 1 1.1.1.3.1.6 BCBC-5A-0 14093507 P101344 Dnpep ProximalPromoter P101344 ProximalPromoter Unique Tile chr1:75200409-75201365 (-) NM_016878 - 316 75200093 13437 Dnpep AA407814 aspartyl aminopeptidase MGI:1278328 Mm.24680 1 1 C3 DNPEP 23549 NM_009049 - 38881 75161528 19711 Resp18 1 cagctgtgccatccatttgta taagcttagctccgaaagggc 3 6 2 1.1.1.3.2.6 BCBC-5A-0 14093526 P102195 ProximalPromoter P102195 ProximalPromoter Unique Tile chr4:86573604-86574526 (+) 0 ttctggtgtctacaaacccacct ggttcctgatccttgctccttat 3 6 3 1.1.1.3.3.6 BCBC-5A-0 14093545 P102945 Msx1 ProximalPromoter P102945 ProximalPromoter Unique Tile chr5:38113070-38114143 (-) NM_010835 - 253 38112817 17701 Msx1 AA675338|AI324650|Hox-7|Hox7|Hox7.1|msh homeo box, msh-like 1 MGI:97168 Mm.256509 5 5 B3|5 21.0 cM MSX1 4487 0 ataattacccctaaatggccacg actcctggatgtggattctacca 3 6 4 1.1.1.3.4.6 BCBC-5A-0 14093564 P104067 Cyp2j13 ProximalPromoter P104067 ProximalPromoter Unique Tile chr4:95563651-95564582 (-) NM_145548 - 5897 95569548 230459 Cyp2j13 - cytochrome P450, family 2, subfamily j, polypeptide 13 MGI:2385197 Mm.268175 4 4 C5 0 ggaaagggtggagagattcaact aggcaggctgcttataatgactg 3 6 5 1.1.1.3.5.6 BCBC-5A-0 14093583 P104529 1700019E19Rik DistalPromoter P104529 DistalPromoter Unique Tile chr12:86969083-86970946 (-) NM_029601 + 719 86971665 76411 1700019E19Rik R75064 RIKEN cDNA 1700019E19 gene MGI:1923661 Mm.292345 12 12 D2 C14orf179 112752 NM_009368 - 939 86968144 21809 Tgfb3 0 ccttatgcctacttatgcctggg ctgcctaatctggaaaggcatta 3 6 6 1.1.1.3.6.6 BCBC-5A-0 14093602 P104985 Mapk8ip3 DistalPromoter P104985 DistalPromoter Unique Tile chr17:24665751-24667853 (-) NM_013931 - 1184 24664567 30957 Mapk8ip3 BB120594|D17Wsu15e|JIP-3|JSAP1|JSAP1a|JSAP1b|JSAP1c|JSAP1d|Jip3|Syd2|mKIAA1066 mitogen-activated protein kinase 8 interacting protein 3 MGI:1353598 Mm.43081 17 17 A3.3 MAPK8IP3 23162 NM_198937 - 20370 24688223 52009 D17Ertd441e 0 tcatgagctggacttcaggtagc atgtagatagcaccacctgccaa 3 6 7 1.1.1.3.7.6 BCBC-5A-0 14093621 P105531 Arpc4 DistalPromoter P105531 DistalPromoter Unique Tile chr6:113340845-113342707 (+) NM_026552 + 1184 113343891 68089 Arpc4 20kDa|5330419I20Rik|AI327076|p20-Arc actin related protein 2/3 complex, subunit 4 MGI:1915339 Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619; Mm.289306; Mm.401619 6 6 E3 ARPC4 10093 NM_133932 - 446 113343153 101206 Tada3l 0 atattcctggatcttgggttgga ggttcaaattgcaactaggaggc 3 6 8 1.1.1.3.8.6 BCBC-5A-0 14093640 P106525 Pknox2 DistalPromoter P106525 DistalPromoter Unique Tile chr9:36834168-36836151 (-) NM_148950;NM_001029838; - 1221 36832947 208076 Pknox2 D230005H23Rik|Prep2 Pbx/knotted 1 homeobox 2 MGI:2445415 Mm.260335 9 9 A4 PKNOX2 63876 0 ctccccactgcttctctacttcc acaccaacatcatgacaaccaca 3 6 9 1.1.1.3.9.6 BCBC-5A-0 14093659 P207001 Prokr1 ProximalPromoter P207001 ProximalPromoter Unique Tile chr6:87556539-87557525 (-) NM_021381 - 197 87556342 58182 Prokr1 EG-VEGFR1|Gpr73|Pkr1 prokineticin receptor 1 MGI:1929676 Mm.333226 6 6 D1 PROKR1 10887 0 gcatcctttcttaacctcaccct cctaagtcgagtggaactgagga 3 6 10 1.1.1.3.10.6 BCBC-5A-0 14093678 P201530 Oprk1 ProximalPromoter P201530 ProximalPromoter Unique Tile chr1:5577227-5578304 (+) NM_011011 + 269 5578573 18387 Oprk1 KOR|KOR-1|MGC151172|Oprk2|R21 opioid receptor, kappa 1 MGI:97439 Mm.7977 1 1 A2-A3|1 5.5 cM OPRK1 4986 0 tcatttagcctccttggatgtgt ccgtgtgtttggaatttcttttc 3 6 11 1.1.1.3.11.6 BCBC-5A-0 14093697 P203845 Arnt2 ProximalPromoter P203845 ProximalPromoter Unique Tile chr7:84285927-84286995 (-) NM_007488 - 217 84286144 11864 Arnt2 Hif-2b|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 MGI:107188 Mm.38594 7 7 D3|7 42.5 cM ARNT2 9915 1 cctaatcagggcatctactgtgg caccattcgagaacgaggatg 3 6 12 1.1.1.3.12.6 BCBC-5A-0 14093716 P204494 Gtl3 ProximalPromoter P204494 ProximalPromoter Unique Tile chr8:98324081-98325154 (-) NM_008187 - 160 98323921 14894 Gtl3 2600014O15Rik|AL024127|T10-2A2 gene trap locus 3 MGI:107428 Mm.2080 8 8 C5 GTL3 29105 0 ccccgaggatattttgaacaact aacttggttgccaagggactatt 3 6 13 1.1.1.3.13.6 BCBC-5A-0 14093735 P205739 ProximalPromoter P205739 ProximalPromoter No Hits Tile 1 aagaggaatattaccacccccac tgccaatcatctcttccttgttt 3 6 14 1.1.1.3.14.6 BCBC-5A-0 14093754 P201632 Traf6 ProximalPromoter P201632 ProximalPromoter Unique Tile chr2:101478042-101479033 (+) NM_009424 + 245 101479278 22034 Traf6 2310003F17Rik|AI851288|C630032O20Rik Tnf receptor-associated factor 6 MGI:108072 Mm.292729 2 2 E2 TRAF6 7189 NM_009019 - 27702 101450340 19373 Rag1 0 tgatctttttgaaagcctcttgc atcccattctccaacattgtcac 3 6 15 1.1.1.3.15.6 BCBC-5A-0 14093773 P201021 AI847670 ProximalPromoter P201021 ProximalPromoter Unique Tile chr5:20935913-20936856 (+) NM_177869 + 31 20936887 330050 AI847670 4631428I10 expressed sequence AI847670 MGI:2140983 Mm.40655 5 5 A3 0 agtaaaacccaaaggcatccaat tacttaacgccttaaatcccggt 3 6 16 1.1.1.3.16.6 BCBC-5A-0 14093792 P200226 Crkrs ProximalPromoter P200226 ProximalPromoter Unique Tile chr11:98018222-98019268 (+) NM_026952 + 135 98019403 69131 Crkrs 1810022J16Rik|AI646528|Crk7|MGC141525|Pksc Cdc2-related kinase, arginine/serine-rich MGI:1098802 Mm.260516 11 11 D|11 56.0 cM CRKRS 51755 NM_013634;NM_134027; - 8872 98009350 19014 Pparbp 0 ggcagagaaaatgaatgcaaaac aggagagagggaagaaaccaaga 3 6 17 1.1.1.3.17.6 BCBC-5A-0 14093811 P210787 Pskh1 ProximalPromoter P210787 ProximalPromoter Unique Tile chr8:108788440-108789368 (+) NM_173432 + 234 108789602 244631 Pskh1 AW539964|E130013P03Rik protein serine kinase H1 MGI:3528383 Mm.27627 8 8 D3 PSKH1 5681 NM_175024 + 5742 108782698 234700 G630049C14Rik 0 gagaaacaaatttcattgctgcc catttgtggagggaaaagttctg 3 6 18 1.1.1.3.18.6 BCBC-5A-0 14093830 P208042 Prps2 ProximalPromoter P208042 ProximalPromoter Unique Tile chrX:162726738-162727685 (-) NM_026662 - 53 162726791 110639 Prps2 2610101M19Rik|AA589463|AI464149|MGC28388|Prps-2 phosphoribosyl pyrophosphate synthetase 2 MGI:97776 Mm.272955 X X 72.0 cM PRPS2 5634 0 gagaatccaagggacaggaagtt gactgcgatgcagactactgcta 3 6 19 1.1.1.3.19.6 BCBC-5A-0 14093489 P100246 Hadhsc ProximalPromoter P100246 ProximalPromoter Unique Tile chr3:131261114-131262117 (-) NM_008212 - 78 131261192 15107 Hadhsc AA409008|AU019341|AW742602|Hadh L-3-hydroxyacyl-Coenzyme A dehydrogenase, short chain MGI:96009 Mm.260164 3 3 G3 HADHSC 3033 NM_027816 - 30265 131292382 71519 Cyp2u1 1 gagagtctcttcccagccaca aggaagaggaggacatggagc 3 7 1 1.1.1.3.1.7 BCBC-5A-0 14093508 P101368 Tmod3 ProximalPromoter P101368 ProximalPromoter Unique Tile chr9:75345319-75346260 (-) NM_016963 - 239 75345558 50875 Tmod3 U-Tmod|UTMOD tropomodulin 3 MGI:1355315 Mm.38445 9 9 D|9 38.0 cM TMOD3 29766 NM_001038710;NM_016711; - 37300 75383560 50876 Tmod2 0 ccacaccttggtgcgatttat acagccgctcccttcttagtc 3 7 2 1.1.1.3.2.7 BCBC-5A-0 14093527 P102129 Adcy7 ProximalPromoter P102129 ProximalPromoter Unique Tile chr8:91160974-91162051 (+) NM_007406;NM_001037724;NM_001037723; + 456 91162507 11513 Adcy7 AA407758|MGC141539 adenylate cyclase 7 MGI:102891 Mm.288206 8 8 C3|8 40.0 cM ADCY7 113 0 ttcccatcctaccaaaagagtga gtcatcaagttgtgaacccttcc 3 7 3 1.1.1.3.3.7 BCBC-5A-0 14093546 P102969 Nsg1 ProximalPromoter P102969 ProximalPromoter Unique Tile chr5:38447429-38448340 (-) NM_010942 - 261 38447690 18196 Nsg1 Neep21|m234|p21 neuron specific gene family member 1 MGI:109149 Mm.7414 5 5 B3|5 21.0 cM D4S234E 27065 0 aactttgagctctgaacacctgg ctagccagatcagagtctcaggc 3 7 4 1.1.1.3.4.7 BCBC-5A-0 14093565 P104091 Ndufs2 ProximalPromoter P104091 ProximalPromoter Unique Tile chr1:173083988-173085009 (-) NM_153064 - 201 173083787 226646 Ndufs2 AL033311|MGC27667 NADH dehydrogenase (ubiquinone) Fe-S protein 2 MGI:2385112 Mm.21669 1 1 H3 NDUFS2 4720 NM_172845 + 2087 173087096 240913 Adamts4 0 atatctcaggaagaaaggcccag ttctctgggcgtgagagatttac 3 7 5 1.1.1.3.5.7 BCBC-5A-0 14093584 P104553 Ube2e3 DistalPromoter P104553 DistalPromoter Unique Tile chr2:78668369-78670532 (+) NM_009454 + 647 78669885 22193 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast) MGI:107412 Mm.1485; Mm.393087; Mm.1485; Mm.393087; Mm.1485; Mm.393087; Mm.1485; Mm.393087; Mm.1485; Mm.393087; Mm.1485; Mm.393087; Mm.1485; Mm.393087; Mm.1485; Mm.393087; Mm.1485; Mm.393087 2 2 D UBE2E3 10477 1 tccaggtgaatgtcaataatggg aaacaaacaaacaaaagccctcc 3 7 6 1.1.1.3.6.7 BCBC-5A-0 14093603 P105099 Nfkb2 DistalPromoter P105099 DistalPromoter Unique Tile chr19:46355782-46357687 (+) NM_019408 + 1241 46358928 18034 Nfkb2 NF-kappaB2|lyt|p49|p49/p100|p50B|p52 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100 MGI:1099800 Mm.102365 19 19 C3-D2|19 45.75 cM NFKB2 4791 NM_028627 - 22780 46380467 73728 Psd 0 ggactaagatggggagatgttgg acactccagtaaccctcccagag 3 7 7 1.1.1.3.7.7 BCBC-5A-0 14093622 P105555 D3Ucla1 DistalPromoter P105555 DistalPromoter Unique Tile chr3:58614989-58617112 (-) NM_030685 - 1306 58613683 28146 D3Ucla1 RAMP4|Serp1 DNA segment, Chr 3, University of California at Los Angeles 1 MGI:92638 Mm.29702 3 3 D|3 31.8 cM SERP1 27230 NM_001005509 + 1045 58613944 229317 Eif2a 0 aatcaatccaactgctgcaatgt ttatgcgtctgtatctgagcgtg 3 7 8 1.1.1.3.8.7 BCBC-5A-0 14093641 P106547 Txndc9 DistalPromoter P106547 DistalPromoter Unique Tile chr1:37942667-37944165 (-) NM_172054 - 913 37941754 98258 Txndc9 AI098020|APACD thioredoxin domain containing 9 MGI:2138153 Mm.28438 1 1 B TXNDC9 10190 NM_198303 + 112 37942555 226982 Eif5b 2 aggcagggtagggtgatgattta ctcacaccatatgtgccctgtc 3 7 9 1.1.1.3.9.7 BCBC-5A-0 14093660 P207027 Stk4 ProximalPromoter P207027 ProximalPromoter Unique Tile chr2:163764333-163765343 (+) NM_021420 + 249 163765592 58231 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 MGI:1929004 Mm.234472 2 2 H3 STK4 6789 NM_025996 - 1790 163762543 67145 Tomm34 1 agtgctcttaaccactgagccac cacgggcttgataagtgagttct 3 7 10 1.1.1.3.10.7 BCBC-5A-0 14093679 P201462 Ppp1r16b ProximalPromoter P201462 ProximalPromoter Unique Tile chr2:158355619-158356606 (+) NM_153089 + 232 158356838 228852 Ppp1r16b ANKRD4|C130078N17Rik|TIMAP|Wdt4 protein phosphatase 1, regulatory (inhibitor) subunit 16B MGI:2151841 Mm.150540; Mm.392660; Mm.150540; Mm.392660; Mm.150540; Mm.392660; Mm.150540; Mm.392660; Mm.150540; Mm.392660; Mm.150540; Mm.392660; Mm.150540; Mm.392660; Mm.150540; Mm.392660; Mm.150540; Mm.392660 2 2 H1 PPP1R16B 26051 NM_175419 + 39247 158316372 109275 Actr5 2 gtcttttcttgcttgttggctgt aatcaagaccgagacaatgtggt 3 7 11 1.1.1.3.11.7 BCBC-5A-0 14093698 P203869 Igsf21 ProximalPromoter P203869 ProximalPromoter Unique Tile chr4:139519098-139520095 (-) NM_198610 - 238 139518860 230868 Igsf21 BC055811|Gm141|MGC67646 immunoglobin superfamily, member 21 MGI:2681842 Mm.298731 4 4 D3 IGSF21 84966 0 ccttctaaagcctgtcaggtgaa atctcatcacaactgcttgcttg 3 7 12 1.1.1.3.12.7 BCBC-5A-0 14093717 P204518 Foxd1 ProximalPromoter P204518 ProximalPromoter Unique Tile chr13:99453238-99454251 (+) NM_008242 + 160 99454411 15229 Foxd1 AI385632|BF-2|FREAC4|Hfh10|Hfhbf2 forkhead box D1 MGI:1347463 Mm.347441 13 13 D1|13 52.0 cM FOXD1 2297 NM_145455 - 36114 99417124 218490 Btf3 0 tacacaattattcggatttcccg gagttggagactgaagcccacta 3 7 13 1.1.1.3.13.7 BCBC-5A-0 14093736 P205763 Psen2 ProximalPromoter P205763 ProximalPromoter Unique Tile chr1:182082700-182083594 (-) NM_011183 - 124 182082576 19165 Psen2 AI266870|ALG-3|Ad4h|PS-2|PS2 presenilin 2 MGI:109284 Mm.330850 1 1 H4|1 101.0 cM PSEN2 5664 0 cctccatagcacaaagctcaact aaacatctgtgggaagtctcctg 3 7 14 1.1.1.3.14.7 BCBC-5A-0 14093755 P206513 ORF5 ProximalPromoter P206513 ProximalPromoter Unique Tile chr16:87329873-87330866 (-) NM_016924 - 104 87329769 53858 ORF5 - open reading frame 5 MGI:1858215 Mm.162406 16 16 C3.3 C21orf6 10069 NM_024258 + 13385 87344251 74112 Usp16 0 aagccctctttcccagtaatttg ttgctttctggtcctggttttta 3 7 15 1.1.1.3.15.7 BCBC-5A-0 14093774 P201046 2610019A05Rik ProximalPromoter P201046 ProximalPromoter Unique Tile chr11:106009553-106010556 (-) NM_028126 - 41 106009594 72149 2610019A05Rik 6030402H20Rik|AI480680|E130112C09Rik RIKEN cDNA 2610019A05 gene MGI:1919399 Mm.340911 11 11 E1 LYK5 92335 NM_026009 - 21837 106032393 67163 2610204L23Rik 0 ctgaaggccagtccagactacat tacctggtctaggagtcagagcg 3 7 16 1.1.1.3.16.7 BCBC-5A-0 14093793 P200250 Tm4sf5 ProximalPromoter P200250 ProximalPromoter Unique Tile chr11:70320514-70321424 (+) NM_029360 + 47 70321471 75604 Tm4sf5 2010003F10Rik|AI323987 transmembrane 4 superfamily member 5 MGI:1922854 Mm.24400 11 11 B3 NM_001013607 - 9387 70330811 327956 Vmo1 2 atcaggactgaaactcaagcagg aggagaggagtggctggtagact 3 7 17 1.1.1.3.17.7 BCBC-5A-0 14093812 P210811 Slc31a1 ProximalPromoter P210811 ProximalPromoter Unique Tile chr4:61845926-61846907 (+) NM_175090 + 202 61847109 20529 Slc31a1 4930445G01Rik|AI787263|AU016967|Ctr1 solute carrier family 31, member 1 MGI:1333843 Mm.248637 4 4 C1-C2 SLC31A1 1317 NM_139291 - 42325 61889232 66440 Cdc26 0 gaagggagacatgaggtccacta taccctgagagagtttgtcctgc 3 7 18 1.1.1.3.18.7 BCBC-5A-0 14093831 P207976 1110058L19Rik ProximalPromoter P207976 ProximalPromoter Unique Tile chr1:23960190-23961109 (-) NM_026503 - 275 23959915 68002 1110058L19Rik 1700001E18Rik|AI847425|C6orf57 RIKEN cDNA 1110058L19 gene MGI:1915252 Mm.250424 1 1 A5 C6orf57 135154 0 ttcagaggacctgagttccattc aaggagggaagttcaaagtccaa 3 7 19 1.1.1.3.19.7 BCBC-5A-0 14093490 P100270 Hpn ProximalPromoter P100270 ProximalPromoter Unique Tile chr7:30824648-30826082 (-) NM_008281 - 613 30824035 15451 Hpn AA408042|AI788568 hepsin MGI:1196620 Mm.19182 7 7 B1 HPN 3249 NM_011322 - 9623 30835705 20266 Scn1b 0 ctgtctgcctttccttccctt agtgtcagaccccagacctga 3 8 1 1.1.1.3.1.8 BCBC-5A-0 14093509 P101392 Bri3 ProximalPromoter P101392 ProximalPromoter Unique Tile chr5:144507648-144508594 (+) NM_018772 + 168 144508762 55950 Bri3 I3|I3 protein brain protein I3 MGI:1933174 Mm.38011; Mm.430717; Mm.38011; Mm.430717; Mm.38011; Mm.430717; Mm.38011; Mm.430717; Mm.38011; Mm.430717 5 5 G2 BRI3 25798 0 tccttgcttggtttttggaga agagaagttctgactcccggc 3 8 2 1.1.1.3.2.8 BCBC-5A-0 14093528 P102153 Atp2a1 ProximalPromoter P102153 ProximalPromoter Unique Tile chr7:126238980-126240046 (-) NM_007504 - 15241 126254221 11937 Atp2a1 SERCA1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 MGI:105058 Mm.35134 7 7 F3|7 61.4 cM ATP2A1 487 NM_030566 + 18393 126220587 70314 Rabep2 0 tgaccaacatgtcaccatctttc gaaaggtggttgagtcccttctt 3 8 3 1.1.1.3.3.8 BCBC-5A-0 14093547 P103275 Vapa ProximalPromoter P103275 ProximalPromoter Unique Tile chr17:65513416-65514500 (-) NM_013933 - 332 65513084 30960 Vapa 33kDa|VAP33 vesicle-associated membrane protein, associated protein A MGI:1353561 Mm.391032 17 17 E1.2 VAPA 9218 NM_153519 - 24799 65539299 213272 Txndc2 1 gatgaacaaggaaatccatctcg aattccgaacggaagagagtcat 3 8 4 1.1.1.3.4.8 BCBC-5A-0 14093566 P104115 BC060945 ProximalPromoter P104115 ProximalPromoter Inter Repeats Tile chr4:114908592-114909612 (+) NM_172306 + 38 114909574 13118 BC060945 Cyp4a12 cDNA sequence BC060945 MGI:3611747 Mm.276106 4 4 D1|4 49.5 cM 0 tttgagaattcagagcttcaccc tacaacagcttctggatcaccaa 3 8 5 1.1.1.3.5.8 BCBC-5A-0 14093585 P104577 Anp32a DistalPromoter P104577 DistalPromoter Unique Tile chr9:62136549-62138559 (+) NM_009672 + 874 62139433 11737 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A MGI:108447 Mm.269088 9 9 B|9 36.0 cM ANP32A 8125 1 ctaataacaaccaaagggcctgc gcgttgcacgtttcattctaatc 3 8 6 1.1.1.3.6.8 BCBC-5A-0 14093604 P105123 6430527G18Rik DistalPromoter P105123 DistalPromoter Unique Tile chr12:87737215-87739252 (-) NM_145836 - 36139 87773354 238330 6430527G18Rik - RIKEN cDNA 6430527G18 gene MGI:2442463 Mm.248358 12 12 D2 C14orf4 64207 2 agagaagggagtgcacactgatg cacacacaccccaaatgtacaga 3 8 7 1.1.1.3.7.8 BCBC-5A-0 14093623 P105489 Thex1 DistalPromoter P105489 DistalPromoter Unique Tile chr8:36965623-36967758 (-) NM_026067 - 1625 36963998 67276 Thex1 3'hexo|3110010F15Rik three prime histone mRNA exonuclease 1 MGI:1914526 Mm.207534 8 8 B1.1 THEX1 90459 0 atagttcttttggcgggggttat actgaaacccagccctctgtaag 3 8 8 1.1.1.3.8.8 BCBC-5A-0 14093642 P000786 Blank P000786 Buffer Control Negative Blank 3 8 9 1.1.1.3.9.8 BCBC-5A-0 14093661 P207052 Stag2 ProximalPromoter P207052 ProximalPromoter Unique Tile chrX:38445287-38446219 (+) NM_021465 + 262 38446481 20843 Stag2 9230105L23Rik|B230112I07Rik|SA-2|SAP2 stromal antigen 2 MGI:1098583 Mm.290422 X - STAG2 10735 0 tccttctgcatagggactttgag tccatgcatatgccatcttacac 3 8 10 1.1.1.3.10.8 BCBC-5A-0 14093680 P201488 Mipep ProximalPromoter P201488 ProximalPromoter Unique Tile chr14:59737664-59738611 (+) NM_027436 + 80 59738691 70478 Mipep 5730405E07Rik mitochondrial intermediate peptidase MGI:1917728 Mm.274650 14 14 D1 MIPEP 4285 NM_183175 + 15406 59722258 239126 C1qtnf9 0 tcgtgatgagacactgggagtta gaaacgtcctggatttgagtttg 3 8 11 1.1.1.3.11.8 BCBC-5A-0 14093699 P204278 Cpeb1 ProximalPromoter P204278 ProximalPromoter Unique Tile chr7:81328533-81329509 (-) NM_007755 - 344 81328189 12877 Cpeb1 AU024112|Cpeb|mCPEB cytoplasmic polyadenylation element binding protein 1 MGI:108442 Mm.273122; Mm.410473; Mm.273122; Mm.410473; Mm.273122; Mm.410473; Mm.273122; Mm.410473; Mm.273122; Mm.410473; Mm.273122; Mm.410473 7 7 D3 CPEB1 64506 NM_021492 - 37929 81367438 11775 Ap3b2 0 cctctgcactttaactccagcat gtgaccctgaccatttcactctc 3 8 12 1.1.1.3.12.8 BCBC-5A-0 14093718 P204542 Htr4 ProximalPromoter P204542 ProximalPromoter Unique Tile chr18:62448362-62449443 (+) NM_008313 + 129 62449572 15562 Htr4 5-HT4|5-HT<4L> 5 hydroxytryptamine (serotonin) receptor 4 MGI:109246 Mm.20440 18 18 D3 HTR4 3360 0 ggttccaaactatccagctcaaa catcctcctgctcctaaccaag 3 8 13 1.1.1.3.13.8 BCBC-5A-0 14093737 P205787 Rangap1 ProximalPromoter P205787 ProximalPromoter Unique Tile chr15:81557176-81558142 (-) NM_011241 - 20 81557156 19387 Rangap1 C79654|Fug1|mKIAA1835 RAN GTPase activating protein 1 MGI:103071 Mm.270975 15 15 E1|15 43.3 cM RANGAP1 5905 1 cacttatcattgagctatgcccc cttcgatttgatttgttcaagcc 3 8 14 1.1.1.3.14.8 BCBC-5A-0 14093756 P206537 Tuba8 ProximalPromoter P206537 ProximalPromoter Unique Tile chr6:121175623-121176569 (+) NM_017379 + 160 121176409 53857 Tuba8 - tubulin, alpha 8 MGI:1858225 Mm.32884 6 6 F1 TUBA8 51807 NM_028730 + 26090 121149533 74043 Pex26 0 gggtgaagaaatcctttgctctt aggagacttggagcccagtagat 3 8 15 1.1.1.3.15.8 BCBC-5A-0 14093775 P200979 Dnajc18 ProximalPromoter P200979 ProximalPromoter Unique Tile chr18:35829132-35830153 (-) NM_029669 - 37 35829095 76594 Dnajc18 2700075B01Rik DnaJ (Hsp40) homolog, subfamily C, member 18 MGI:1923844 Mm.354767 18 18 B3 DNAJC18 202052 NM_001033141 - 17312 35847465 68545 1110006O17Rik 2 gctcttacccttctgtttgggtt gtttaatacgtgtaggctgcgct 3 8 16 1.1.1.3.16.8 BCBC-5A-0 14093794 P200275 Mettl7a ProximalPromoter P200275 ProximalPromoter Unique Tile chr15:100132093-100133024 (+) NM_027334 + 165 100132859 70152 Mettl7a 2210414H16Rik|3300001H21Rik|Aam-B|UbiE1 methyltransferase like 7A MGI:1916523 Mm.220975 15 15 F3 METTL7A 25840 NM_183109 + 23223 100108870 75002 4930478A21Rik 0 tataaagcccatcagaagccaaa attgtacatcacggagaatcgct 3 8 17 1.1.1.3.17.8 BCBC-5A-0 14093813 P210835 A830039N20Rik ProximalPromoter P210835 ProximalPromoter Unique Tile chr14:22082338-22083308 (-) NM_175545 - 143 22082195 268723 A830039N20Rik - RIKEN cDNA A830039N20 gene MGI:2445176 Mm.39513 14 14 A3 0 tgcactcaataacagctcaccat aaaacctcatccagacttctccc 3 8 18 1.1.1.3.18.8 BCBC-5A-0 14093832 P208000 Gpr177 ProximalPromoter P208000 ProximalPromoter Unique Tile chr3:159773700-159774766 (+) NM_026582 + 221 159774987 68151 Gpr177 5031439A09Rik|AI173978|AI987742 G protein-coupled receptor 177 MGI:1915401 Mm.6766 3 3 H4 GPR177 79971 0 atgtgtgatttgagttgcattgg cgcagtctctaccatgtttcctt 3 8 19 1.1.1.3.19.8 BCBC-5A-0 14093491 P100576 Tgfb3 ProximalPromoter P100576 ProximalPromoter Unique Tile chr12:86968111-86969082 (-) NM_009368 - 33 86968144 21809 Tgfb3 MGC118722|Tgfb-3 transforming growth factor, beta 3 MGI:98727 Mm.3992 12 12 D2|12 41.0 cM TGFB3 7043 NM_029601 + 2583 86971665 76411 1700019E19Rik 0 cccgtgtttgacatctccatt cacatgcacacacacactgct 3 9 1 1.1.1.3.1.9 BCBC-5A-0 14093510 P101416 Ift20 ProximalPromoter P101416 ProximalPromoter Unique Tile chr11:78351432-78352488 (+) NM_018854 + 142 78352630 55978 Ift20 0610009H04Rik|AU015496 intraflagellar transport 20 homolog (Chlamydomonas) MGI:1915585 Mm.358671 11 11 B5 IFT20 90410 NM_009395 - 99 78352389 21927 Tnfaip1 0 gatggaacatggaggaaacga gtcaagttttcgacccactgc 3 9 2 1.1.1.3.2.9 BCBC-5A-0 14093529 P102177 C1qc ProximalPromoter P102177 ProximalPromoter Unique Tile chr4:136164821-136165819 (-) NM_007574 - 128 136164949 12262 C1qc AI385742|C1qg|Ciqc complement component 1, q subcomponent, C chain MGI:88225 Mm.2570 4 4 D3|4 66.1 cM C1QC 714 NM_007572 - 5017 136170836 12259 C1qa 0 ccacttgaggaaagagtcaggaa ctatcccagcaaacaaagacacc 3 9 3 1.1.1.3.3.9 BCBC-5A-0 14093548 P103299 Vezf1 ProximalPromoter P103299 ProximalPromoter Unique Tile chr11:87883021-87884003 (+) NM_016686 + 470 87884473 22344 Vezf1 AI848691|AW046909|db1 vascular endothelial zinc finger 1 MGI:1313291 Mm.46628 11 11 C ZNF161 7716 NM_173374 + 19048 87863973 110809 Sfrs1 0 cccctttattctggtgactgatg cagcttccacctacgaactagga 3 9 4 1.1.1.3.4.9 BCBC-5A-0 14093567 P104049 Atp1a1 ProximalPromoter P104049 ProximalPromoter Unique Tile chr3:101733973-101734883 (-) NM_144900 - 228 101733745 11928 Atp1a1 Atpa-1|BC010319|MGC38419 ATPase, Na+/K+ transporting, alpha 1 polypeptide MGI:88105 Mm.280103 3 3 F3|3 48.4 cM ATP1A1 476 0 gtgcctagatgtttgggtgtttc agaacactggggacttgagtgag 3 9 5 1.1.1.3.5.9 BCBC-5A-0 14093586 P104601 Calm1 DistalPromoter P104601 DistalPromoter Unique Tile chr12:100599884-100602070 (+) NM_009790 + 1480 100600590 12313 Calm1 AI256814|AI327027|AI461935|AL024000|CaM|Calm calmodulin 1 MGI:88251 Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885 12 12 E CALM1 801 1 ggcctaatagaatttgccacagg atctaccttcgggacaacgactc 3 9 6 1.1.1.3.6.9 BCBC-5A-0 14093605 P105147 Pdcd10 DistalPromoter P105147 DistalPromoter Unique Tile chr3:75644098-75646132 (-) NM_019745 - 1372 75642726 56426 Pdcd10 2410003B13Rik|MGC102058|Tfa15|Tfar15 programmed cell death 10 MGI:1928396 Mm.316473 3 3 E3 PDCD10 11235 NM_009250 + 599 75643499 20713 Serpini1 0 ccatttgatctggaacctgtgag taagataggatgggttccggcta 3 9 7 1.1.1.3.7.9 BCBC-5A-0 14093624 P105513 Pnrc2 DistalPromoter P105513 DistalPromoter Unique Tile chr4:135147465-135149626 (-) NM_026383 - 1562 135145903 52830 Pnrc2 0610011E17Rik|D4Bwg0593e|MGC11707 proline-rich nuclear receptor coactivator 2 MGI:106512 Mm.29159 4 4 D3|4 66.7 cM PNRC2 55629 NM_009924 + 17932 135167558 12802 Cnr2 0 cttcccaggtgatcctagcttgt tcctccctagtcctggcactaac 3 9 8 1.1.1.3.8.9 BCBC-5A-0 14093643 P000828 Blank P000828 Buffer Control Negative Blank 3 9 9 1.1.1.3.9.9 BCBC-5A-0 14093662 P207076 Hnrph1 ProximalPromoter P207076 ProximalPromoter Unique Tile chr11:50219951-50221022 (+) NM_021510 + 169 50221191 59013 Hnrph1 E430005G16Rik|Hnrnph heterogeneous nuclear ribonucleoprotein H1 MGI:1891925 Mm.21740 11 11 B1.2 HNRPH1 3187 0 ctcttgaagtcttgtgatgccct gctcagccctcttcataaactga 3 9 10 1.1.1.3.10.9 BCBC-5A-0 14093681 P201512 ProximalPromoter P201512 ProximalPromoter Unique Tile chr4:53651583-53652648 (+) 1 gcccactgatctatcttcctcct gaagctggaggagccttagagac 3 9 11 1.1.1.3.11.9 BCBC-5A-0 14093700 P204302 Ctsb ProximalPromoter P204302 ProximalPromoter Unique Tile chr14:62075553-62076480 (+) NM_007798 + 94 62076574 13030 Ctsb - cathepsin B MGI:88561 Mm.236553 14 14 D1|14 28.0 cM CTSB 1508 0 gccagagacacttttggcttaga ccaaaagaaactggtggtttgtc 3 9 12 1.1.1.3.12.9 BCBC-5A-0 14093719 P204476 Gpr27 ProximalPromoter P204476 ProximalPromoter Unique Tile chr6:99657245-99658331 (+) NM_008158 + 190 99658141 14761 Gpr27 - G protein-coupled receptor 27 MGI:1202299 Mm.35009 6 6 E1 GPR27 2850 NM_025829 - 25011 99632234 66892 Eif4e3 0 gactcccttgccctctaaaccta acaggtcgagcagcaggtagta 3 9 13 1.1.1.3.13.9 BCBC-5A-0 14093738 P205812 Rxra ProximalPromoter P205812 ProximalPromoter Unique Tile chr2:27498408-27499460 (+) NM_011305 + 251 27499209 20181 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha MGI:98214 Mm.24624 2 2 A3|2 17.0 cM RXRA 6256 0 gggcagagagctaaccaaggtat ggaaatgtttggtgtccatgtct 3 9 14 1.1.1.3.14.9 BCBC-5A-0 14093757 P206562 Icos ProximalPromoter P206562 ProximalPromoter Unique Tile chr1:60921240-60922224 (+) NM_017480 + 248 60922472 54167 Icos AILIM|H4|Ly115 inducible T-cell co-stimulator MGI:1858745 Mm.42044 1 1 C2|1 32.0 cM ICOS 29851 1 agcaagtgcttttacccactgag gatggatgaatggatgaatggat 3 9 15 1.1.1.3.15.9 BCBC-5A-0 14093776 P201003 ProximalPromoter P201003 ProximalPromoter No Hits Tile 2 ctctaaatcttggcactcctcca cgcaaataaccaccattatccc 3 9 16 1.1.1.3.16.9 BCBC-5A-0 14093795 P207776 Rpl37 ProximalPromoter P207776 ProximalPromoter Unique Tile chr15:5062858-5063927 (+) NM_026069 + 56 5063871 67281 Rpl37 3110005M08Rik ribosomal protein L37 MGI:1914531 Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657; Mm.10474; Mm.361657 15 15 A1 RPL37 6167 NM_001013367 + 27148 5091075 105787 Prkaa1 0 cctccctcctctgatttcagttt atttacagagcccagaaaccaca 3 9 17 1.1.1.3.17.9 BCBC-5A-0 14093814 P001355 Blank P001355 Buffer Control Negative Blank 3 9 18 1.1.1.3.18.9 BCBC-5A-0 14093833 P208024 9530058B02Rik ProximalPromoter P208024 ProximalPromoter Unique Tile chr17:25596614-25597309 (-) NM_026633 - 276 25596338 68241 9530058B02Rik - RIKEN cDNA 9530058B02 gene MGI:1915491 Mm.328870 17 17 B1 C16orf14 84331 NM_026686 + 5807 25603116 68347 0610011F06Rik 1 tgacaataggaaccttaaggcca gggccctttgtgtactagggtag 3 9 19 1.1.1.3.19.9 BCBC-5A-0 14093492 P100600 Ctr9 ProximalPromoter P100600 ProximalPromoter Unique Tile chr7:110818762-110819800 (+) NM_009431 + 401 110820201 22083 Ctr9 AA409336|KIAA0155|Sh2bp1|Tsbp|Tsp|mKIAA0155 Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) MGI:109345 Mm.255858 7 7 E3|7 54.0 cM CTR9 9646 NM_010826;NM_194464; - 45120 110773642 17540 Mrvi1 0 gttggagcttgaagccagaga cagtcgttttgtgttgtccca 3 10 1 1.1.1.3.1.10 BCBC-5A-0 14093511 P101350 Ppp2r1a ProximalPromoter P101350 ProximalPromoter Unique Tile chr17:20649343-20650295 (+) NM_016891 + 129 20650166 51792 Ppp2r1a 6330556D22Rik|PP2A|PR65 protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform MGI:1926334 Mm.294138 17 17 A3.2 PPP2R1A 5518 NM_134193 - 30310 20619033 171227 V1re4 1 gaggggagtcgaaaggagaaa gaaggatccccgtacctgaac 3 10 2 1.1.1.3.2.10 BCBC-5A-0 14093530 P102201 Cetn3 ProximalPromoter P102201 ProximalPromoter Unique Tile chr13:82260480-82261572 (+) NM_007684 + 944 82260628 12626 Cetn3 MmCEN3 centrin 3 MGI:1097706 Mm.12481 13 13 C3 CETN3 1070 1 cttgattgacatgaatgctgacc attccactgatattagccaggca 3 10 3 1.1.1.3.3.10 BCBC-5A-0 14093549 P103323 Smad3 ProximalPromoter P103323 ProximalPromoter Unique Tile chr9:63555777-63556731 (-) NM_016769 - 91 63555686 17127 Smad3 AU022421|Madh3 MAD homolog 3 (Drosophila) MGI:1201674 Mm.7320 9 - SMAD3 4088 1 ctggctccagctattgttcaagt cgaacttcgcttttaactctgga 3 10 4 1.1.1.3.4.10 BCBC-5A-0 14093568 P104073 Pdk3 ProximalPromoter P104073 ProximalPromoter Unique Tile chrX:90084657-90085688 (-) NM_145630 - 157 90084814 236900 Pdk3 2610001M10Rik|AI035637|MGC6383 pyruvate dehydrogenase kinase, isoenzyme 3 MGI:2384308 Mm.12775 X X C3 PDK3 5165 2 gcctttccaatggatgtgtatgt gtagaagagccgcatcctcacta 3 10 5 1.1.1.3.5.10 BCBC-5A-0 14093587 P106996 Tapbp DistalPromoter P106996 DistalPromoter Unique Tile chr17:33527285-33529282 (+) NM_001025313;NM_009318; + 649 33529931 21356 Tapbp D17Wsu91e|TPN TAP binding protein MGI:1201689 Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082; Mm.154457; Mm.392082 17 17 B1|17 18.41 cM TAPBP 6892 NM_020625 + 603 33526682 81630 Zbtb22 0 gccctcttctttcctttgttcct ttagactaagctccccaattgcc 3 10 6 1.1.1.3.6.10 BCBC-5A-0 14093606 P105171 Timm22 DistalPromoter P105171 DistalPromoter Unique Tile chr11:76220202-76222026 (+) NM_019818 + 1347 76223373 56322 Timm22 2610511O07Rik|Tim22 translocase of inner mitochondrial membrane 22 homolog (yeast) MGI:1929742 Mm.18803 11 11 B4 TIMM22 29928 NM_008750 - 4866 76215336 18230 Nxn 0 tacccagaatcaagctgaaccaa tgggtgaatcactctcttcttgc 3 10 7 1.1.1.3.7.10 BCBC-5A-0 14093625 P105537 Nola1 DistalPromoter P105537 DistalPromoter Unique Tile chr3:129824683-129826742 (-) NM_026578 - 1340 129823343 68147 Nola1 AA409823|AI326794|C430047J18Rik|GAR1 nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) MGI:1930948 Mm.24873 3 3 G3 NOLA1 54433 NM_007686 + 2018 129828760 12630 Cfi 0 atgggttgttattgggctattgg ttaacttcttccgtctgtgctgc 3 10 8 1.1.1.3.8.10 BCBC-5A-0 14093644 P000924 Blank P000924 Buffer Control Negative Blank 3 10 9 1.1.1.3.9.10 BCBC-5A-0 14093663 P207007 ProximalPromoter P207007 ProximalPromoter Unique Tile chrX:154969808-154970775 (+) 0 tcagacacagttcttgttgcgtt ctcccaggattagaccctcctta 3 10 10 1.1.1.3.10.10 BCBC-5A-0 14093682 P201536 ProximalPromoter P201536 ProximalPromoter Unique Tile chr2:126698925-126699911 (+) 0 aagcaggaacaacagagttttgc aagtgctgggattacaaacctga 3 10 11 1.1.1.3.11.10 BCBC-5A-0 14093701 P204326 Dll1 ProximalPromoter P204326 ProximalPromoter Unique Tile chr17:15081048-15081994 (-) NM_007865 - 498 15080550 13388 Dll1 Delta1 delta-like 1 (Drosophila) MGI:104659 Mm.4875 17 17 A2|17 8.2 cM DLL1 28514 NM_024203 + 19214 15101208 67544 4932442K08Rik 1 tcgcacaataacagactgcctta cttttccaaaccctcctctcaat 3 10 12 1.1.1.3.12.10 BCBC-5A-0 14093720 P204500 Slc39a7 ProximalPromoter P204500 ProximalPromoter Unique Tile chr17:33642097-33642973 (-) NM_008202 - 85 33642012 14977 Slc39a7 AA408174|AI117660|AL024048|H-2Ke4|H2-Ke4|KE4|Ke-4|MGC143814|MGC143815|Ring5 solute carrier family 39 (zinc transporter), member 7 MGI:95909 Mm.18556 17 17 B1|17 18.48 cM SLC39A7 7922 NM_011306 + 102 33642871 20182 Rxrb 0 tagaacattcggggcaaagagta cccgatacctttaccaacatgg 3 10 13 1.1.1.3.13.10 BCBC-5A-0 14093739 P205440 Gnb2 ProximalPromoter P205440 ProximalPromoter Unique Tile chr5:137763284-137764185 (-) NM_010312 - 267 137763017 14693 Gnb2 Gnb-2 guanine nucleotide binding protein, beta 2 MGI:95784 Mm.30141 5 5 G2|5 76.0 cM GNB2 2783 NM_031408 + 14359 137748925 57330 Perq1 0 cctaaactccgaggactgtctca gcaagacatcctctctagggaca 3 10 14 1.1.1.3.14.10 BCBC-5A-0 14093758 P206586 Extl3 ProximalPromoter P206586 ProximalPromoter Unique Tile chr14:64052344-64053300 (-) NM_018788 - 17759 64034585 54616 Extl3 2900009G18Rik|AU040105|Ext1l|KIAA0519|mKIAA0519 exostoses (multiple)-like 3 MGI:1860765 Mm.103748 14 14 D1 EXTL3 2137 2 gtggagagatcaggagatgagga cagagacattcgtgactttccg 3 10 15 1.1.1.3.15.10 BCBC-5A-0 14093777 P201027 Gmpr2 ProximalPromoter P201027 ProximalPromoter Unique Tile chr14:54625186-54626193 (+) NM_177992;NM_134075; + 113 54626306 105446 Gmpr2 1810008P16Rik|5730544D12Rik|AA959850 guanosine monophosphate reductase 2 MGI:1917903 Mm.390685 14 14 C3 GMPR2 51292 NM_008683 - 216 54625977 18002 Nedd8 0 aatgtacagcagaatggcctgat tgggacaagtagtttgttccgtt 3 10 16 1.1.1.3.16.10 BCBC-5A-0 14093796 P207800 4932438H23Rik ProximalPromoter P207800 ProximalPromoter Unique Tile chr16:90919746-90920708 (-) NM_028905 - 25630 90945376 74387 4932438H23Rik 4931406G06Rik|AI550392 RIKEN cDNA 4932438H23 gene MGI:1921637 Mm.236220 16 16 C3.3 C21orf62 56245 2 aggctaccgggatgtagattagc gcaacatgaaccacatgacaaat 3 10 17 1.1.1.3.17.10 BCBC-5A-0 14093815 P210793 ProximalPromoter P210793 ProximalPromoter Unique Tile chr1:60230867-60231769 (+) 0 aaaatttatgggccgaggaacta tgacggcagttggtctttttaat 3 10 18 1.1.1.3.18.10 BCBC-5A-0 14093834 P208048 0610008C08Rik ProximalPromoter P208048 ProximalPromoter Unique Tile chrX:90618833-90619791 (+) NM_026673 + 81 90619872 68316 0610008C08Rik 1110019O03Rik|MGC130105|MGC130106 RIKEN cDNA 0610008C08 gene MGI:1915566 Mm.343319; Mm.379156; Mm.343319; Mm.379156; Mm.343319; Mm.379156; Mm.343319; Mm.379156; Mm.343319; Mm.379156; Mm.343319; Mm.379156; Mm.343319; Mm.379156; Mm.343319; Mm.379156 X X D1 0 tcccaatcagtctctgggtaaaa ttagatcctgattcccttgacca 3 10 19 1.1.1.3.19.10 BCBC-5A-0 14093493 P100624 Wee1 ProximalPromoter P100624 ProximalPromoter Unique Tile chr7:109911732-109912798 (+) NM_009516 + 442 109913240 22390 Wee1 - wee 1 homolog (S. pombe) MGI:103075 Mm.287173 7 7 E3 WEE1 7465 0 gggcaatttgcttctgttgag cacgttctatagtcgcggtcc 3 11 1 1.1.1.3.1.11 BCBC-5A-0 14093512 P101374 Ccni ProximalPromoter P101374 ProximalPromoter Unique Tile chr5:94281978-94282998 (-) NM_017367 - 746 94281232 12453 Ccni - cyclin I MGI:1341077 Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424 5 5 E3.3-F1.3 CCNI 10983 0 ttactgagagcccagagcagg tcggtgacgtaagaggcttgt 3 11 2 1.1.1.3.2.11 BCBC-5A-0 14093531 P102507 Pla2g2c ProximalPromoter P102507 ProximalPromoter Unique Tile chr4:137996631-137997712 (+) NM_008868 + 91 137997803 18781 Pla2g2c - phospholipase A2, group IIC MGI:106638 Mm.5189 4 4 D3|4 68.0 cM PLA2G2C 376578 NM_178671 - 301 137996932 212190 Ubxd3 0 catgtacacgtgcattggtcttt cccagattctaagggtctcgttt 3 11 3 1.1.1.3.3.11 BCBC-5A-0 14093550 P103347 Ak2 ProximalPromoter P103347 ProximalPromoter Unique Tile chr4:128494252-128495333 (+) NM_001033966;NM_016895; + 235 128495568 11637 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 MGI:87978 Mm.29460 4 4 D2.2|4 61.0 cM AK2 204 NM_172875 - 29531 128464721 242669 Adc 0 tgatcagctcttacttccgcttc gggtgaagttctagtttggcctt 3 11 4 1.1.1.3.4.11 BCBC-5A-0 14093569 P104097 Pkhd1 ProximalPromoter P104097 ProximalPromoter Unique Tile chr1:20600918-20601965 (-) NM_153179 - 2290 20603208 241035 Pkhd1 AI118496|AI182499|FPC|Tigm1 polycystic kidney and hepatic disease 1 MGI:2155808 Mm.249253 1 1 A2-A5 PKHD1 5314 0 tctgcctggtgttagagaggaac gaggaccaggaagtctgctacaa 3 11 5 1.1.1.3.5.11 BCBC-5A-0 14093588 P107018 Top1 DistalPromoter P107018 DistalPromoter Unique Tile chr2:160334222-160336088 (+) NM_009408 + 1582 160337670 21969 Top1 AI467334|D130064I21Rik|Top-1 topoisomerase (DNA) I MGI:98788 Mm.217233 2 2 H2-3|2 92.0 cM TOP1 7150 0 caaacgaatctccaaaagaaccc gtacccatgtgcctctctccttt 3 11 6 1.1.1.3.6.11 BCBC-5A-0 14093607 P105105 Sfmbt1 DistalPromoter P105105 DistalPromoter Unique Tile chr14:29591913-29593932 (+) NM_019460 + 1076 29595008 54650 Sfmbt1 DKFZp434L243|Sfmbt|Smr Scm-like with four mbt domains 1 MGI:1859609 Mm.294662 14 14 A3|14 10.5 cM SFMBT1 51460 0 cattgagagaagtcagggcaaga acgccttcatttcatgttctcaa 3 11 7 1.1.1.3.7.11 BCBC-5A-0 14093626 P105561 Arts1 DistalPromoter P105561 DistalPromoter Unique Tile chr13:75109407-75111378 (+) NM_030711 + 5505 75105873 80898 Arts1 ERAAP|PILSA|PILSAP type 1 tumor necrosis factor receptor shedding aminopeptidase regulator MGI:1933403 Mm.83526 13 13 C1 ARTS-1 51752 0 ctgagaagataggtgcaggggtt cacagcatagggtagtggattgc 3 11 8 1.1.1.3.8.11 BCBC-5A-0 14093645 P001020 Blank P001020 Buffer Control Negative Blank 3 11 9 1.1.1.3.9.11 BCBC-5A-0 14093664 P207034 2900002H16Rik ProximalPromoter P207034 ProximalPromoter Unique Tile chr5:124791511-124792504 (-) NM_021430 - 391 124791902 75695 2900002H16Rik 6330559I19Rik|FLJ39378 RIKEN cDNA 2900002H16 gene MGI:1922945 Mm.41180 5 5 F FLJ39378 353116 NM_019770 + 8904 124801408 56334 Tmed2 0 ttttgtctcagctcgaagggtag cgatatcgtacacatccatgacg 3 11 10 1.1.1.3.10.11 BCBC-5A-0 14093683 P202045 4933412E14Rik ProximalPromoter P202045 ProximalPromoter Unique Tile chr9:54299551-54300528 (-) NM_173778 + 36592 54337120 244885 4933412E14Rik - RIKEN cDNA 4933412E14 gene MGI:2441692 Mm.358924 9 9 A5.3 2 cctgagctaaaaatcgcaaagaa ggtgaggacctgatgcagatg 3 11 11 1.1.1.3.11.11 BCBC-5A-0 14093702 P204350 Ei24 ProximalPromoter P204350 ProximalPromoter Unique Tile chr9:36547209-36548127 (-) NM_007915 - 470 36546739 13663 Ei24 AA536736|AI115355|PIG8 etoposide induced 2.4 mRNA MGI:108090 Mm.4337 9 9 A4|9 14.0 cM EI24 9538 NM_008408 - 29897 36517312 16430 Stt3a 2 ctaaactaactgggtggtggtgc agtcaaaccccttctcactgttg 3 11 12 1.1.1.3.12.11 BCBC-5A-0 14093721 P204524 Hoxd11 ProximalPromoter P204524 ProximalPromoter Unique Tile chr2:74479408-74480453 (+) NM_008273 + 2778 74483231 15431 Hoxd11 Hox-4.6|Hox-5.4 homeo box D11 MGI:96203 Mm.207763 2 2 C3|2 45.0 cM HOXD11 3237 NM_008274 + 3483 74475925 15432 Hoxd12 0 aacaactgaacaaaggcagaagc cctggtatctggagaacgtgaac 3 11 13 1.1.1.3.13.11 BCBC-5A-0 14093740 P205464 Gzmc ProximalPromoter P205464 ProximalPromoter Unique Tile chr14:55188756-55189735 (-) NM_010371 - 29 55188727 14940 Gzmc AI323531|CCP2|Ctla-5|Ctla5 granzyme C MGI:109256 Mm.14465 14 14 C3|14 20.5 cM NM_010374 - 32 55188724 14943 Gzmf 0 atgcttagagtgaggtcagccag cctatgcacctctgcttctgatt 3 11 14 1.1.1.3.14.11 BCBC-5A-0 14093759 P206519 Stag3 ProximalPromoter P206519 ProximalPromoter Unique Tile chr5:138509180-138510091 (+) NM_016964 + 247 138510338 50878 Stag3 SA-2 stromal antigen 3 MGI:1355311 Mm.285609 5 5 G2|5 67.0 cM STAG3 10734 NM_172412 - 359 138509732 71951 Gpc2 0 gcgatttctggctgttagaaaga acgcctcctttactcctatgtcc 3 11 15 1.1.1.3.15.11 BCBC-5A-0 14093778 P201052 Clcn3 ProximalPromoter P201052 ProximalPromoter Unique Tile chr8:63884157-63885194 (+) NM_173876;NM_007711; - 8715 63875442 12725 Clcn3 Clc3 chloride channel 3 MGI:103555 Mm.259751 8 8 B3.1|8 32.2 cM CLCN3 1182 NM_177148 + 8579 63875578 320383 B230317F23Rik 2 tggacttctagagtgccatcctc ggggttacggaataggaaagcta 3 11 16 1.1.1.3.16.11 BCBC-5A-0 14093797 P207825 Map1lc3b ProximalPromoter P207825 ProximalPromoter Unique Tile chr8:124475431-124476284 (+) NM_026160 + 240 124476524 67443 Map1lc3b 1010001C15Rik|MGC118046|Map1lc3 microtubule-associated protein 1 light chain 3 beta MGI:1914693 Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255; Mm.28357; Mm.426255 8 8 E1 MAP1LC3B 81631 NM_133765 - 10588 124464843 76454 Fbxo31 0 acctgtctgtcacctgctcctac gacttcattccccttcagtcctt 3 11 17 1.1.1.3.17.11 BCBC-5A-0 14093816 P210817 Tmem161b ProximalPromoter P210817 ProximalPromoter Unique Tile chr13:84694521-84695584 (+) NM_175187 + 127 84695457 72745 Tmem161b 2810446P07Rik|AI843389 transmembrane protein 161B MGI:1919995 Mm.295063 13 13 C3 TMEM161B 153396 2 aatttcctccccagttctgactc tcctcctgaaggttgtcactctc 3 11 18 1.1.1.3.18.11 BCBC-5A-0 14093835 P001571 Blank P001571 Buffer Control Negative Blank 3 11 19 1.1.1.3.19.11 BCBC-5A-0 14093494 P100648 Amy2 ProximalPromoter P100648 ProximalPromoter Duplication Tile chr3:113386601-113387533 (-) NM_009669 - 142 113386743 11723 Amy2 Amy-2 amylase 2, pancreatic Mm.331313 3 3 F3|3 50.0 cM 0 gtggccacagaacccttactg gtatcgctcacattccttggc 3 12 1 1.1.1.3.1.12 BCBC-5A-0 14093513 P101398 Prpf40a ProximalPromoter P101398 ProximalPromoter Unique Tile chr2:53013453-53014505 (-) NM_018785 - 257 53013196 56194 Prpf40a 2810012K09Rik|FBP11|Fnbp11|Fnbp3 PRP40 pre-mRNA processing factor 40 homolog A (yeast) MGI:1860512 Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219 2 2 C1 PRPF40A 55660 NM_022989 + 380 53014125 65103 Arl6ip6 1 agaaggaaagcaaggaggacg gaagtttctgcgtcgagtgct 3 12 2 1.1.1.3.2.12 BCBC-5A-0 14093532 P102531 Ptbp1 ProximalPromoter P102531 ProximalPromoter Unique Tile chr10:79256760-79257660 (+) NM_008956 + 83 79257743 19205 Ptbp1 AA407203|HNRPI|PTB-1|PTB2|PTB3|PTB4|Ptb|pPTB polypyrimidine tract binding protein 1 Mm.265610 10 10 C1|10 43.0 cM NM_181681 - 19698 79277358 216152 BC005764 0 tgtattacagaaaagggaggcca ggccttctattggtcaaaaggtt 3 12 3 1.1.1.3.3.12 BCBC-5A-0 14093551 P103281 Foxe3 ProximalPromoter P103281 ProximalPromoter Unique Tile chr4:114424323-114425250 (-) NM_015758 - 378 114423945 30923 Foxe3 FREAC8|dyl forkhead box E3 MGI:1353569 Mm.377122 4 4 C7|4 49.6 cM FOXE3 2301 NM_008593 - 17503 114406820 17301 Foxd2 0 ttacctctcagagcacctgttcc cttgtagaggtcagatccccctt 3 12 4 1.1.1.3.4.12 BCBC-5A-0 14093570 P104121 Pfkfb3 ProximalPromoter P104121 ProximalPromoter Unique Tile chr2:11416076-11417000 (-) NM_133232 - 3819 11419895 170768 Pfkfb3 E330010H22Rik|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 MGI:2181202 Mm.19669 2 2 A1 PFKFB3 5209 0 ctggcctctatagcctgtcttga cctcatatctctgccacacactg 3 12 5 1.1.1.3.5.12 BCBC-5A-0 14093589 P107040 Vcp DistalPromoter P107040 DistalPromoter Unique Tile chr4:43022850-43024871 (-) NM_009503 - 1295 43021555 269523 Vcp 3110001E05|CDC48|p97 valosin containing protein MGI:99919 Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457; Mm.262053; Mm.379457 4 4 A5|4 23.0 cM VCP 7415 NM_053081 - 6339 43031210 60534 Fancg 0 tgaatgacattgctgtgtatggg acccacacagactgacctgagag 3 12 6 1.1.1.3.6.12 BCBC-5A-0 14093608 P105129 Hsd17b12 DistalPromoter P105129 DistalPromoter Unique Tile chr2:93960245-93962436 (-) NM_019657 - 1497 93958748 56348 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 MGI:1926967 Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889 2 2 E1 HSD17B12 51144 2 cactcctcctctgtttcctgtca ctaagctgcctctacctcccaag 3 12 7 1.1.1.3.7.12 BCBC-5A-0 14093627 P106150 Agtpbp1 DistalPromoter P106150 DistalPromoter Unique Tile chr13:59555430-59557515 (-) NM_023328 - 1368 59554062 67269 Agtpbp1 1700020N17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|BB114605|MGC90651|Nna1|mKIAA1035|nmf243|pcd ATP/GTP binding protein 1 MGI:2159437 Mm.153008 13 13 B2 AGTPBP1 23287 NM_030153 + 37518 59595033 78689 Mak10 0 taggaaggaaatggctgggaata taaagctagacgtggggacacaa 3 12 8 1.1.1.3.8.12 BCBC-5A-0 14093646 P001116 Blank P001116 Buffer Control Negative Blank 3 12 9 1.1.1.3.9.12 BCBC-5A-0 14093665 P207058 Efemp2 ProximalPromoter P207058 ProximalPromoter Unique Tile chr19:5474411-5475490 (+) NM_021474 + 653 5474837 58859 Efemp2 0610011K11Rik|MBP1 epidermal growth factor-containing fibulin-like extracellular matrix protein 2 MGI:1891209 Mm.276367 19 19 A EFEMP2 30008 NM_009985 - 5913 5468498 13041 Ctsw 1 ggtgggcagaataacattttgag ctgaagatggctagtaccccaga 3 12 10 1.1.1.3.10.12 BCBC-5A-0 14093684 P202069 Pigt ProximalPromoter P202069 ProximalPromoter Unique Tile chr2:164187447-164188490 (+) NM_133779 + 275 164188765 78928 Pigt 4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T MGI:1926178 Mm.28228 2 2 H3 PIGT 51604 NM_026797 + 9690 164177757 52840 Dbndd2 2 gacagttgcttgcacttcctctt ccggtaccaagtgctgctattac 3 12 11 1.1.1.3.11.12 BCBC-5A-0 14093703 P204284 Pcdha4 ProximalPromoter P204284 ProximalPromoter Unique Tile chr18:37077757-37078753 (+) NM_007766 + 91 37078662 12936 Pcdha4 Cnr1|Crnr1|R75250 protocadherin alpha 4 MGI:1298406 Mm.308500 18 18 B2-B3 PCDHA4 56144 NM_138662 + 5577 37072180 192163 Pcdha3 0 tgctacagtgcttgcctagtctg caggaaaattccatttcaagtgc 3 12 12 1.1.1.3.12.12 BCBC-5A-0 14093722 P204548 Irf8 ProximalPromoter P204548 ProximalPromoter Unique Tile chr8:123621266-123622175 (+) NM_008320 + 177 123622352 15900 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 MGI:96395 Mm.334861 8 8 E1|8 65.0 cM IRF8 3394 2 accctgtcttggaaaacaaacaa tctttccgagaaatcacttttgc 3 12 13 1.1.1.3.13.12 BCBC-5A-0 14093741 P205488 Hipk2 ProximalPromoter P205488 ProximalPromoter Unique Tile chr6:38767192-38768123 (-) NM_010433 - 38338 38805530 15258 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 MGI:1314872 Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962; Mm.23790; Mm.391962 6 6 B HIPK2 28996 0 gtcattgtaactcaggggaccag atcttaaggatgatgccagtgga 3 12 14 1.1.1.3.14.12 BCBC-5A-0 14093760 P206543 Rfx5 ProximalPromoter P206543 ProximalPromoter Unique Tile chr3:95038406-95039412 (+) NM_017395 + 1006 95040418 53970 Rfx5 - regulatory factor X, 5 (influences HLA class II expression) MGI:1858421 Mm.24308 3 3 F2|3 43.2 cM RFX5 5993 NM_009150 + 19920 95018486 20341 Selenbp1 0 agttgctatgggtagcgagacag cagaatatgattggtcgagaggg 3 12 15 1.1.1.3.15.12 BCBC-5A-0 14093779 P200488 Tlr4 ProximalPromoter P200488 ProximalPromoter Unique Tile chr4:66312856-66313800 (+) NM_021297 + 159 66313959 21898 Tlr4 Lps|Ly87|Ran/M1|Rasl2-8 toll-like receptor 4 MGI:96824 Mm.38049 4 4 C1|4 33.0 cM TLR4 7099 0 ttcagcaacttctgattcccttc cagttagactcccaagtctccca 3 12 16 1.1.1.3.16.12 BCBC-5A-0 14093798 P207849 Kctd4 ProximalPromoter P207849 ProximalPromoter Unique Tile chr14:74695735-74696756 (+) NM_026214 + 114 74696642 67516 Kctd4 2210017A09Rik|AU017169 potassium channel tetramerisation domain containing 4 MGI:1914766 Mm.390712 14 14 D2 KCTD4 386618 NM_026816 - 48260 74745016 68705 Gtf2f2 0 aatcctaaaatgctctggaaggc ttacgctccattttcaagatgct 3 12 17 1.1.1.3.17.12 BCBC-5A-0 14093817 P001337 Blank P001337 Buffer Control Negative Blank 3 12 18 1.1.1.3.18.12 BCBC-5A-0 14093836 P001667 Blank P001667 Buffer Control Negative Blank 3 12 19 1.1.1.3.19.12 BCBC-5A-0 14093495 P100582 Thy1 ProximalPromoter P100582 ProximalPromoter Unique Tile chr9:43795859-43796951 (+) NM_009382 + 3 43796948 21838 Thy1 CD90|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta MGI:98747 Mm.3951 9 9 A5.1|9 26.0 cM THY1 7070 NM_016808;NM_198091;NM_198092; + 21210 43818161 53376 Usp2 0 cttggggcataatgctggata ctgtggtggggaaagctacag 3 13 1 1.1.1.3.1.13 BCBC-5A-0 14093514 P101422 Pnliprp1 ProximalPromoter P101422 ProximalPromoter Unique Tile chr19:58781131-58782172 (+) NM_018874 + 36 58782136 18946 Pnliprp1 Plrp1 pancreatic lipase related protein 1 MGI:97723 Mm.10753 19 19 D2|19 29.0 cM PNLIPRP1 5407 NM_011128 + 30806 58812978 18947 Pnliprp2 0 aacttaggagcgagtctgggg ctgcagtccaagcaaacagtg 3 13 2 1.1.1.3.2.13 BCBC-5A-0 14093533 P102555 Ret ProximalPromoter P102555 ProximalPromoter Unique Tile chr6:118163099-118164002 (-) NM_009050 - 238 118163337 19713 Ret PTC|RET51|RET9 ret proto-oncogene MGI:97902 Mm.57199 6 6 E3-F1|6 53.2 cM RET 5979 0 aggacctgtttgttcactccaag cgactgctaggggaacctctatt 3 13 3 1.1.1.3.3.13 BCBC-5A-0 14093552 P103305 Preb ProximalPromoter P103305 ProximalPromoter Unique Tile chr5:31237034-31237970 (-) NM_016703 - 218 31236816 50907 Preb C85705 prolactin regulatory element binding MGI:1355326 Mm.272414 5 5 B1 PREB 10113 NM_053085 + 7287 31245257 69852 Tcf23 0 tgtgacttcctctgtcagtctgg ggaggtggggctagaagagatta 3 13 4 1.1.1.3.4.13 BCBC-5A-0 14093571 P104331 Idh3g DistalPromoter P104331 DistalPromoter Unique Tile chrX:70040506-70042618 (-) NM_008323 - 889 70039617 15929 Idh3g - isocitrate dehydrogenase 3 (NAD+), gamma MGI:1099463 Mm.14825 X X A7.3-B|X 29.5 cM IDH3G 3421 NM_009279 + 562 70039944 20832 Ssr4 0 aaccctggatgcagtatccctta ggtatatcccaccccaaagttca 3 13 5 1.1.1.3.5.13 BCBC-5A-0 14093590 P107062 Adcyap1 DistalPromoter P107062 DistalPromoter Unique Tile chr17:93501250-93503264 (+) NM_009625 + 448 93503712 11516 Adcyap1 PACAP adenylate cyclase activating polypeptide 1 MGI:105094 Mm.3407 17 17 E5 ADCYAP1 116 0 gtgggttttgcctttaacagacc tttttctcccccagtcacgtaat 3 13 6 1.1.1.3.6.13 BCBC-5A-0 14093609 P105153 DistalPromoter P105153 DistalPromoter No Hits Tile 0 gatccaaactggagagttggctt gtcagatcttgctgcagatggtt 3 13 7 1.1.1.3.7.13 BCBC-5A-0 14093628 P106171 Rdh14 DistalPromoter P106171 DistalPromoter Unique Tile chr12:10413718-10415799 (+) NM_023697 + 990 10416789 105014 Rdh14 3110030G19Rik|AW215439|PAN2 retinol dehydrogenase 14 (all-trans and 9-cis) MGI:1920402 Mm.119343 12 12 A1.1 RDH14 57665 NM_027588 + 17667 10396051 70881 Nt5c1b 0 tcgaagaaagaccatgaccaaaa acgtaagtctcagctgtgcaagg 3 13 8 1.1.1.3.8.13 BCBC-5A-0 14093647 P000840 Blank P000840 Buffer Control Negative Blank 3 13 9 1.1.1.3.9.13 BCBC-5A-0 14093666 P207082 Slc28a2 ProximalPromoter P207082 ProximalPromoter Unique Tile chr2:122131311-122132285 (+) NM_172980 + 40 122132245 269346 Slc28a2 2010208B10Rik|B430217P18|BB152493|Cnt2 solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 MGI:1913105 Mm.29510 2 2 E3 SLC28A2 9153 0 atggagatgtggaaatggaaatg gtctgatgtcagtgaggatgcac 3 13 10 1.1.1.3.10.13 BCBC-5A-0 14093685 P202094 Snrpa ProximalPromoter P202094 ProximalPromoter Unique Tile chr7:26904791-26905777 (-) NM_015782 - 85 26904876 53607 Snrpa C430021M15Rik|Rnu1a-1|Rnu1a1|U1A small nuclear ribonucleoprotein polypeptide A MGI:1855690 Mm.386890 7 7 A3 SNRPA 6626 NM_019394 - 14881 26889910 12587 Mia1 2 tcatttggggtctacaggaagaa acgctgcacagacacacaactat 3 13 11 1.1.1.3.11.13 BCBC-5A-0 14093704 P204308 Cyba ProximalPromoter P204308 ProximalPromoter Unique Tile chr8:125319168-125320094 (-) NM_007806 - 151 125319017 13057 Cyba b558 cytochrome b-245, alpha polypeptide MGI:1316658 Mm.271671 8 - CYBA 1535 NM_138656 - 9386 125329480 192156 Mvd 1 ttgatgatcgattatactggggg actgcttgtgacttgtgaccgta 3 13 12 1.1.1.3.12.13 BCBC-5A-0 14093723 P205245 Cbfa2t3h ProximalPromoter P205245 ProximalPromoter Unique Tile chr8:125585414-125586400 (-) NM_009824 - 347 125585067 12398 Cbfa2t3h A630044F12Rik|ETO-2|MTGR2 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 homolog (human) MGI:1338013 Mm.194339; Mm.406286; Mm.194339; Mm.406286; Mm.194339; Mm.406286; Mm.194339; Mm.406286; Mm.194339; Mm.406286 8 - CBFA2T3 863 0 ctcctcaaaccctgaagagaaca tctgacttcccaacaacttcctc 3 13 13 1.1.1.3.13.13 BCBC-5A-0 14093742 P205513 Ica1 ProximalPromoter P205513 ProximalPromoter Unique Tile chr6:8728105-8729305 (-) NM_010492 - 10 8728095 15893 Ica1 69kDa|ICA69 islet cell autoantigen 1 MGI:96391 Mm.275683 6 6 A1-A2|6 2.9 cM ICA1 3382 0 atgctttaaaccccactctctcc gagatcctagcgtccctccag 3 13 14 1.1.1.3.14.13 BCBC-5A-0 14093761 P206568 Ctps2 ProximalPromoter P206568 ProximalPromoter Unique Tile chrX:158244715-158245765 (+) NM_018737 + 56 158245709 55936 Ctps2 CTPsH cytidine 5'-triphosphate synthase 2 MGI:1933185 Mm.2065 X X F5 CTPS2 56474 NM_025932 - 12179 158232536 67043 Syap1 1 actccacgaggtcttcagtaacg acaaaacaagcgcctaaaaagtg 3 13 15 1.1.1.3.15.13 BCBC-5A-0 14093780 P200513 4921530G04Rik ProximalPromoter P200513 ProximalPromoter Unique Tile chr11:120934648-120935664 (-) NM_027622 - 119 120934767 70956 4921530G04Rik - RIKEN cDNA 4921530G04 gene MGI:1918206 Mm.158506 11 11 E2 FLJ35767 400629 NM_028602 + 26568 120962232 73679 Tex19 1 cttaagcctgttgtgagccactt aaaagtcgattccttcttccctg 3 13 16 1.1.1.3.16.13 BCBC-5A-0 14093799 P207782 Zc3h13 ProximalPromoter P207782 ProximalPromoter Unique Tile chr14:74017475-74018387 (+) NM_026083 + 140 74018527 67302 Zc3h13 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618 zinc finger CCCH type containing 13 MGI:1914552 Mm.74704 14 14 D2 ZC3H13 23091 NM_019775 + 41006 73976469 56373 Cpb2 0 ggattcttgctgcctgagagata ttcctgacgcctgtttactaagg 3 13 17 1.1.1.3.17.13 BCBC-5A-0 14093818 P001361 Blank P001361 Buffer Control Negative Blank 3 13 18 1.1.1.3.18.13 BCBC-5A-0 14093837 P001763 Blank P001763 Buffer Control Negative Blank 3 13 19 1.1.1.3.19.13 BCBC-5A-0 14093496 P100606 Tuba4 ProximalPromoter P100606 ProximalPromoter Unique Tile chr1:75102714-75103764 (-) NM_009447 - 313 75102401 22145 Tuba4 M[a]4 tubulin, alpha 4 MGI:1095410 Mm.1155; Mm.401266; Mm.1155; Mm.401266; Mm.1155; Mm.401266; Mm.1155; Mm.401266; Mm.1155; Mm.401266; Mm.1155; Mm.401266; Mm.1155; Mm.401266; Mm.1155; Mm.401266; Mm.1155; Mm.401266 1 1 C3 TUBA1 7277 NM_011494 + 8697 75094017 20872 Stk16 0 caagcggcttaaccaaatgtc catggtgcaggtattccgatt 3 14 1 1.1.1.3.1.14 BCBC-5A-0 14093515 P101728 ProximalPromoter P101728 ProximalPromoter No Hits Tile 0 tcaggactgccatagaggagc gggcctagagacaatacccca 3 14 2 1.1.1.3.2.14 BCBC-5A-0 14093534 P102579 Shh ProximalPromoter P102579 ProximalPromoter Unique Tile chr5:28797861-28798859 (-) NM_009170 - 14 28797875 20423 Shh 9530036O11Rik|Dsh|Hhg1 sonic hedgehog MGI:98297 Mm.57202 5 5 B1|5 16.0 cM SHH 6469 0 aattagcttgcaaagctcctgtg taaatggtagcaaggctggagag 3 14 3 1.1.1.3.3.14 BCBC-5A-0 14093553 P103329 Mtx2 ProximalPromoter P103329 ProximalPromoter Unique Tile chr2:74647319-74648247 (+) NM_016804 + 21547 74626700 53375 Mtx2 1500012G02Rik metaxin 2 MGI:1859652 Mm.292613 2 2 D MTX2 10651 0 gccctgggagattgttattctct ggggctgaagagtttcgtttatt 3 14 4 1.1.1.3.4.14 BCBC-5A-0 14093572 P104355 Tm4sf1 DistalPromoter P104355 DistalPromoter Unique Tile chr3:57384198-57386091 (-) NM_008536 - 5650 57389848 17112 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 MGI:104678 Mm.856 3 3 D TM4SF1 4071 0 ttggagcattctgtcaggacttc gcctctaaaaggcatctcatggt 3 14 5 1.1.1.3.5.14 BCBC-5A-0 14093591 P107004 Tcf2 DistalPromoter P107004 DistalPromoter Unique Tile chr11:83663875-83666032 (+) NM_009330 + 1211 83667243 21410 Tcf2 AI385728|AI987804|HNF-1Beta|Hnf1b|Hnf1beta|Tcf-2|vHNF1 transcription factor 2 MGI:98505 Mm.7226 11 11 C|11 44.0 cM TCF2 6928 0 ataattttgagtggtggttgggg tcttgtatgccacctagagcagg 3 14 6 1.1.1.3.6.14 BCBC-5A-0 14093610 P105177 Gla DistalPromoter P105177 DistalPromoter Unique Tile chrX:129948402-129950387 (+) NM_013463 - 1093 129947309 11605 Gla Ags galactosidase, alpha MGI:1347344 Mm.1114 X X E-F1|X 53.0 cM GLA 2717 NM_019868 + 767 129947635 56258 Hnrph2 0 ttctcaggaaacgtaaggaagcc agcagctccagagcgttctagtt 3 14 7 1.1.1.3.7.14 BCBC-5A-0 14093629 P105625 Gins4 DistalPromoter P105625 DistalPromoter Unique Tile chr8:24704555-24706474 (-) NM_024240 - 1351 24703204 109145 Gins4 2810037C03Rik|4933405K01Rik|Sld5 GINS complex subunit 4 (Sld5 homolog) MGI:1923847 Mm.27945 8 8 A3 GINS4 84296 NM_020585;NM_001042484; - 15995 24722469 57437 Golga7 0 ggataaacagacttgccacaacg ggcctcatcatgtaactctgacg 3 14 8 1.1.1.3.8.14 BCBC-5A-0 14093648 P000936 Blank P000936 Buffer Control Negative Blank 3 14 9 1.1.1.3.9.14 BCBC-5A-0 14093667 P202722 Mbc2 ProximalPromoter P202722 ProximalPromoter Unique Tile chr10:127929026-127930067 (-) NM_011843 - 218 127928808 23943 Mbc2 vp115 membrane bound C2 domain containing protein MGI:1344426 Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056; Mm.412173; Mm.66056 10 10 D3 FAM62A 23344 NM_134003 - 20626 127950693 103284 Zc3h10 0 taggttctataagaaagccgggg atttgactggtcacggagagaac 3 14 10 1.1.1.3.10.14 BCBC-5A-0 14093686 P202119 C630004H02Rik ProximalPromoter P202119 ProximalPromoter Unique Tile chr11:115183968-115185063 (-) NM_175454 - 159 115183809 217310 C630004H02Rik - RIKEN cDNA C630004H02 gene MGI:2445087 Mm.205707 11 11 E2 C17orf28 283987 NM_027132 + 33100 115150868 69602 Otop3 2 gggtgggacacatacatcataca agtgttgtcctcgatcctcagtc 3 14 11 1.1.1.3.11.14 BCBC-5A-0 14093705 P204332 Dnmt3a ProximalPromoter P204332 ProximalPromoter Unique Tile chr12:3833815-3834878 (+) NM_007872;NM_153743; + 27808 3807070 13435 Dnmt3a AU015806|W91664 DNA methyltransferase 3A MGI:1261827 Mm.5001 12 12 A2-A3 DNMT3A 1788 1 ttctaagtccctttctcctggct tctaagagcctgggtgctatgac 3 14 12 1.1.1.3.12.14 BCBC-5A-0 14093724 P205269 Cdkn2a ProximalPromoter P205269 ProximalPromoter Unique Tile chr4:88765720-88766673 (-) NM_001040654;NM_009877; - 50 88765770 12578 Cdkn2a ARF-INK4a|Arf|INK4a-ARF|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19ARF cyclin-dependent kinase inhibitor 2A MGI:104738 Mm.4733 4 4 C3-C6|4 42.7 cM CDKN2A 1029 NM_007670 - 15517 88782190 12579 Cdkn2b 0 ctttttctccttcccccactttt tgaatcctcacagtgaccaagaa 3 14 13 1.1.1.3.13.14 BCBC-5A-0 14093743 P205446 Gnrhr ProximalPromoter P205446 ProximalPromoter Unique Tile chr5:87272620-87273671 (-) NM_010323 - 189 87272431 14715 Gnrhr - gonadotropin releasing hormone receptor MGI:95790 Mm.26791 5 5 E1|5 44.0 cM GNRHR 2798 NM_172712 - 25316 87247304 231380 Ube1l2 0 gccactaatgagatggcaagact ctgaaggccaagtgtaaccgtag 3 14 14 1.1.1.3.14.14 BCBC-5A-0 14093762 P206592 Atp6ap1 ProximalPromoter P206592 ProximalPromoter Unique Tile chrX:70548830-70549905 (+) NM_018794 + 40 70549865 54411 Atp6ap1 16A|AC45|AI316502|AW108110|Atp6ip1|Atp6s1|C7-1|CF2|FLJ00383|ORF|VATPS1|XAP-3|mFLJ00383 ATPase, H+ transporting, lysosomal accessory protein 1 MGI:109629 Mm.21961 X X A7.3|X 29.83 cM ATP6AP1 537 NM_177234 + 5088 70543742 320703 B230340J04Rik 0 agaggcaggaggatttctgagtt ccatcatagcctcagctttcagt 3 14 15 1.1.1.3.15.14 BCBC-5A-0 14093781 P200537 Prpf3 ProximalPromoter P200537 ProximalPromoter Unique Tile chr3:95904479-95905408 (-) NM_027541 - 36679 95941158 70767 Prpf3 3632413F13Rik PRP3 pre-mRNA processing factor 3 homolog (yeast) MGI:1918017 Mm.279872 3 3 F2 PRPF3 9129 0 ctagcaaagaagccacaccttgt agcctctacgctcctcaactctt 3 14 16 1.1.1.3.16.14 BCBC-5A-0 14093800 P207806 Bag4 ProximalPromoter P207806 ProximalPromoter Unique Tile chr8:27250977-27252202 (-) NM_026121 - 223 27250754 67384 Bag4 2410112I15Rik|SODD BCL2-associated athanogene 4 MGI:1914634 Mm.118400 8 8 A3 BAG4 9530 NM_026032 + 116 27250861 67207 Lsm1 1 ccagggctatacagagaaaccct acttcactgcactgactggagg 3 14 17 1.1.1.3.17.14 BCBC-5A-0 14093819 P207873 Arl2bp ProximalPromoter P207873 ProximalPromoter Unique Tile chr8:97527518-97528547 (+) NM_024269;NM_024191; + 27232 97555779 107566 Arl2bp 1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|Bart1 ADP-ribosylation factor-like 2 binding protein MGI:1349429 Mm.139700 8 8 C5 ARL2BP 23568 NM_026274 + 36061 97491457 67610 Rspry1 0 cacagaccttctgagggctaaaa gggataccactgtccatcttcag 3 14 18 1.1.1.3.18.14 BCBC-5A-0 14093838 P001859 Blank P001859 Buffer Control Negative Blank 3 14 19 1.1.1.3.19.14 BCBC-5A-0 14093497 P100630 Yy1 ProximalPromoter P100630 ProximalPromoter Unique Tile chr12:109240224-109241311 (+) NM_009537 + 172 109241139 22632 Yy1 AW488674|NF-E1 YY1 transcription factor MGI:99150 Mm.3868; Mm.392732; Mm.3868; Mm.392732; Mm.3868; Mm.392732; Mm.3868; Mm.392732; Mm.3868; Mm.392732; Mm.3868; Mm.392732; Mm.3868; Mm.392732; Mm.3868; Mm.392732 12 12 F1|12 53.0 cM YY1 7528 NM_181328 - 42245 109283556 214663 Slc25a29 1 cgagtaaaggcaaaacgaacg atggtctccacctcgatctca 3 15 1 1.1.1.3.1.15 BCBC-5A-0 14093516 P101752 Mrpl46 ProximalPromoter P101752 ProximalPromoter Unique Tile chr7:78657186-78658140 (-) NM_023331 - 584 78656602 67308 Mrpl46 3110052F15Rik|C15orf4|C80107|LIECG2|P2ECSL mitochondrial ribosomal protein L46 MGI:1914558 Mm.193181 7 7 D2 MRPL46 26589 NM_026498 + 324 78656862 67994 Mrps11 0 tatactgtggtgacccccagc cgcttcaggtgagggtaagtg 3 15 2 1.1.1.3.2.15 BCBC-5A-0 14093535 P102513 Ppp1r14b ProximalPromoter P102513 ProximalPromoter Unique Tile chr19:7040794-7041869 (+) NM_008889 + 222 7042091 18938 Ppp1r14b AOM172|PHI-1|PLCB3N|Png protein phosphatase 1, regulatory (inhibitor) subunit 14B MGI:107682 Mm.140; Mm.384495; Mm.140; Mm.384495; Mm.140; Mm.384495; Mm.140; Mm.384495; Mm.140; Mm.384495; Mm.140; Mm.384495; Mm.140; Mm.384495; Mm.140; Mm.384495; Mm.140; Mm.384495; Mm.140; Mm.384495; Mm.140; Mm.384495 19 19 A PPP1R14B 26472 NM_008874 - 3998 7036796 18797 Plcb3 0 gagttttcccgtttaatgttccc aacttaacctctggcctcaaacc 3 15 3 1.1.1.3.3.15 BCBC-5A-0 14093554 P103353 Atp6v0a1 ProximalPromoter P103353 ProximalPromoter Unique Tile chr11:100824350-100825368 (+) NM_016920 + 176 100825544 11975 Atp6v0a1 AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 ATPase, H+ transporting, lysosomal V0 subunit A1 MGI:103286 Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707; Mm.340818; Mm.417707 11 11 D|11 55.8 cM ATP6V0A1 535 NM_008986 - 37643 100786707 19285 Ptrf 0 taggaagcagctgactctgaggt gcgtgtgacttttgaagtgtttg 3 15 4 1.1.1.3.4.15 BCBC-5A-0 14093573 P104379 Nab1 DistalPromoter P104379 DistalPromoter Unique Tile chr1:52446582-52448714 (-) NM_008667 - 1589 52444993 17936 Nab1 - Ngfi-A binding protein 1 MGI:107564 Mm.25903 1 1 C1.1|1 27.0 cM NAB1 4664 0 tatctgctctccacaaggcaaag tggggctgatcctttttacagtt 3 15 5 1.1.1.3.5.15 BCBC-5A-0 14093592 P107026 Traf6 DistalPromoter P107026 DistalPromoter Unique Tile chr2:101476618-101478532 (+) NM_009424 + 746 101479278 22034 Traf6 2310003F17Rik|AI851288|C630032O20Rik Tnf receptor-associated factor 6 MGI:108072 Mm.292729 2 2 E2 TRAF6 7189 NM_009019 - 26278 101450340 19373 Rag1 0 gcctttatccattgaaccacctc tcctgaggtatgcaaaaagggat 3 15 6 1.1.1.3.6.15 BCBC-5A-0 14093611 P105291 Itm2c DistalPromoter P105291 DistalPromoter Unique Tile chr1:87722261-87724236 (+) NM_022417 + 1499 87725735 64294 Itm2c 3110038L02Rik|AU041202|BRI3|E25|E25C|ITM3|R75508 integral membrane protein 2C MGI:1927594 Mm.29870 1 1 C5 ITM2C 81618 2 ggctaagagtgcttgctgtgaaa ctgcacacatttattgggagagc 3 15 7 1.1.1.3.7.15 BCBC-5A-0 14093630 P106214 Nalp10 DistalPromoter P106214 DistalPromoter Unique Tile chr7:108722252-108724340 (+) NM_175532 - 917 108721335 244202 Nalp10 6430548I20Rik|Napl10|PAN5|Pynod NACHT, leucine rich repeat and PYD containing 10 MGI:2444084 Mm.37991 7 7 E3 NALP10 338322 NM_025344 + 1252 108725592 66085 Eif3s5 1 gaatgattgcaggatcctaaggg agggacagtgtgtgtgtgtgtgt 3 15 8 1.1.1.3.8.15 BCBC-5A-0 14093649 P001032 Blank P001032 Buffer Control Negative Blank 3 15 9 1.1.1.3.9.15 BCBC-5A-0 14093668 P202746 1700012H17Rik ProximalPromoter P202746 ProximalPromoter Unique Tile chr4:5570013-5571002 (+) NM_173426 + 323 5571325 242297 1700012H17Rik 5031405P22|AW049855 RIKEN cDNA 1700012H17 gene MGI:1916593 Mm.331470 4 4 A1 C8orf72 90362 0 ctgaaagagcaagaaggcagttc gatgagcttttctgatagcccct 3 15 10 1.1.1.3.10.15 BCBC-5A-0 14093687 P202051 Pkmyt1 ProximalPromoter P202051 ProximalPromoter Unique Tile chr17:23452823-23453797 (+) NM_023058 + 160 23453957 268930 Pkmyt1 6230424P17|AW209059|Myt1 protein kinase, membrane associated tyrosine/threonine 1 MGI:2137630 Mm.182193 17 17 A3.3 PKMYT1 9088 NM_177132 - 2418 23450405 320309 1520401A03Rik 0 tcaggacctctggaagaacagtc ttggctgccttaatattcgtgtc 3 15 11 1.1.1.3.11.15 BCBC-5A-0 14093706 P204356 Scye1 ProximalPromoter P204356 ProximalPromoter Unique Tile chr3:132621263-132622169 (-) NM_007926 - 123 132621140 13722 Scye1 EMAPII|Emap2 small inducible cytokine subfamily E, member 1 MGI:102774 Mm.235137 3 3 H2 SCYE1 9255 NM_173032 + 230 132621493 271981 A630047E20Rik 2 acaagagaaagccatgtaggcag cagctctctccctgtaccacact 3 15 12 1.1.1.3.12.15 BCBC-5A-0 14093725 P205293 Camp ProximalPromoter P205293 ProximalPromoter Unique Tile chr9:109706695-109707642 (-) NM_009921 - 160 109706855 12796 Camp CAP18|Cnlp|Cramp|FALL39|MCLP cathelicidin antimicrobial peptide MGI:108443 Mm.3834 9 9 F2|9 61.0 cM CAMP 820 NM_018757 + 16496 109690199 54369 Nme6 0 taaaggccacatttacaggagga tctagggactgctggttgaagtc 3 15 13 1.1.1.3.13.15 BCBC-5A-0 14093744 P205470 H2-DMb1 ProximalPromoter P205470 ProximalPromoter Unique Tile chr17:33754631-33755669 (+) NM_010387 + 225 33755894 14999 H2-DMb1 AI385589|H-2Mb1|H2-Mb1 histocompatibility 2, class II, locus Mb1 MGI:95922 Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060; Mm.16373; Mm.195060 17 17 B1|17 18.58 cM NM_010388 + 302 33755971 15000 H2-DMb2 2 cctattgtgtatgaggctctggg tgggttgactttctcatctcaca 3 15 14 1.1.1.3.14.15 BCBC-5A-0 14093763 P206024 Grem1 ProximalPromoter P206024 ProximalPromoter Unique Tile chr2:113559291-113560349 (-) NM_011824 - 166 113559457 23892 Grem1 Cktsf1b1|Drm|gremlin|ld gremlin 1 MGI:1344337 Mm.166318 2 2 E4|2 64.5 cM GREM1 26585 1 agaggttcccttcttgcttcagt cacagagacacacacacaccaga 3 15 15 1.1.1.3.15.15 BCBC-5A-0 14093782 P200561 Ccdc104 ProximalPromoter P200561 ProximalPromoter Unique Tile chr11:29147099-29148009 (-) NM_025740 - 143 29147242 216618 Ccdc104 2300003H10|4931428D14Rik coiled-coil domain containing 104 MGI:1913994 Mm.128663 11 11 A4 CCDC104 112942 0 caacacacagtcacctctggttc attccacttcgtcctcttcttcc 3 15 16 1.1.1.3.16.15 BCBC-5A-0 14093801 P207831 Abhd5 ProximalPromoter P207831 ProximalPromoter Unique Tile chr9:122199135-122200223 (+) NM_026179 + 90 122200313 67469 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 MGI:1914719 Mm.280254 9 9 F4 ABHD5 51099 0 aggatgggaattgaacctaggaa ggtagtcatccgtcggaataatg 3 15 17 1.1.1.3.17.15 BCBC-5A-0 14093820 P207897 Slc25a37 ProximalPromoter P207897 ProximalPromoter Unique Tile chr14:68238340-68239311 (-) NM_026331 - 93 68238433 67712 Slc25a37 1700020E22Rik|4930513O14Rik|4930526G11Rik|AI848481|C330015G08Rik|Mscp solute carrier family 25, member 37 MGI:1914962 Mm.293635 14 14 D1 SLC25A37 51312 NM_173420 - 8318 68247629 239167 D930020E02Rik 0 cagacctctgcgttttgatttct ttcttaaagtgggaacctcctcc 3 15 18 1.1.1.3.18.15 BCBC-5A-0 14093839 P001583 Blank P001583 Buffer Control Negative Blank 3 15 19 1.1.1.3.19.15 BCBC-5A-0 14093498 P100654 Ap2m1 ProximalPromoter P100654 ProximalPromoter Unique Tile chr16:20447865-20448790 (+) NM_009679 + 256 20449046 11773 Ap2m1 MGC102136 adaptor protein complex AP-2, mu1 MGI:1298405 Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423; Mm.18946; Mm.235423 16 16 A3 AP2M1 1173 NM_013852 + 13414 20462204 27406 Abcf3 0 tttgtgtccaggttggctctt gcgacccttcctgttcctagt 3 16 1 1.1.1.3.1.16 BCBC-5A-0 14093517 P101776 Aox4 ProximalPromoter P101776 ProximalPromoter Unique Tile chr1:58153454-58154542 (+) NM_023631 + 473 58155015 71872 Aox4 2310003G12Rik|AOH2|MGC144189|MGC144190 aldehyde oxidase 4 MGI:1919122 Mm.244525 1 1 23.2 cM 0 ggtgacgtcggaactatgagc gtattcacggaggccagtgag 3 16 2 1.1.1.3.2.16 BCBC-5A-0 14093536 P102537 Ptp4a3 ProximalPromoter P102537 ProximalPromoter Unique Tile chr15:73577762-73578707 (+) NM_008975 + 425 73579132 19245 Ptp4a3 AV088979|Prl-3 protein tyrosine phosphatase 4a3 MGI:1277098 Mm.390807 15 15 E1 PTP4A3 11156 NM_173365 - 43002 73534760 239530 Gpr20 0 tgttagctagctgttctttgggg gaagtcaggaccaaagggaaaat 3 16 3 1.1.1.3.3.16 BCBC-5A-0 14093555 P103659 Rhoj ProximalPromoter P103659 ProximalPromoter Unique Tile chr12:76226336-76227434 (+) NM_023275 + 160 76227274 80837 Rhoj 1110005O19Rik|AW210585|Arhj|TC10L|TCL ras homolog gene family, member J MGI:1931551 Mm.27467 12 12 C3 RHOJ 57381 0 catttgtaggttcacgttgtcca gggggtagagctggagttaagaa 3 16 4 1.1.1.3.4.16 BCBC-5A-0 14093574 P104403 Tulp2 DistalPromoter P104403 DistalPromoter Unique Tile chr7:45379649-45381716 (-) NM_008807 + 927 45382643 56734 Tulp2 MGC107290|Pdet tubby-like protein 2 MGI:1861600 Mm.383209 7 7 B3 TULP2 7288 NM_008749 - 1221 45378428 18220 Nucb1 0 caacattccttaaagggacccag accagaaccacagaagcttcaca 3 16 5 1.1.1.3.5.16 BCBC-5A-0 14093593 P107048 Wnt3a DistalPromoter P107048 DistalPromoter Unique Tile chr11:59108372-59110375 (-) NM_009522 - 1425 59106947 22416 Wnt3a Wnt-3a|vt wingless-related MMTV integration site 3A MGI:98956 Mm.1367 11 11 B1.3|11 32.0 cM WNT3A 89780 NM_139298 + 12749 59123124 216795 Wnt9a 0 tttcctccaggaccactcataca agctcatgatattgaggatgcca 3 16 6 1.1.1.3.6.16 BCBC-5A-0 14093612 P105315 Mrps34 DistalPromoter P105315 DistalPromoter Unique Tile chr17:24619437-24621286 (+) NM_023260 + 1433 24622719 79044 Mrps34 0610007F04Rik|5330430D13Rik|AV001970|Tce2 mitochondrial ribosomal protein S34 MGI:1930188 Mm.328851; Mm.43081; Mm.328851; Mm.43081; Mm.328851; Mm.43081; Mm.328851; Mm.43081; Mm.328851; Mm.43081; Mm.328851; Mm.43081; Mm.328851; Mm.43081 17 17 A3.3 MRPS34 65993 NM_019730 + 2819 24624105 79059 Nme3 0 aggtcattctactgcctgtgctg caaagccctcctgtgaacaagta 3 16 7 1.1.1.3.7.16 BCBC-5A-0 14093631 P106158 DistalPromoter P106158 DistalPromoter No Hits Tile 0 gaagaaggaggaggaggaggaac aaacattagccagacagtggcct 3 16 8 1.1.1.3.8.16 BCBC-5A-0 14093650 P001128 Blank P001128 Buffer Control Negative Blank 3 16 9 1.1.1.3.9.16 BCBC-5A-0 14093669 P202771 Arhgap24 ProximalPromoter P202771 ProximalPromoter Unique Tile chr5:102720861-102721813 (+) NM_029270;NM_146161; + 41 102721854 231532 Arhgap24 0610025G21Rik|MGC38749 Rho GTPase activating protein 24 MGI:1922647 Mm.233880 5 5 E4 ARHGAP24 83478 2 tggctaggggttctacacacatt gttgcgcaaagagtcaagaagtt 3 16 10 1.1.1.3.10.16 BCBC-5A-0 14093688 P202075 Tollip ProximalPromoter P202075 ProximalPromoter Unique Tile chr7:141712015-141712973 (-) NM_023764 - 219 141711796 54473 Tollip 4930403G24Rik|4931428G15Rik toll interacting protein MGI:1891808 Mm.103551 7 7 F5 TOLLIP 54472 NM_029426;NM_001009930;NM_001009929; + 46167 141759140 75770 Brsk2 0 tgtggtcttagtcacaaggggat gcatgcctaaacctgaacactct 3 16 11 1.1.1.3.11.16 BCBC-5A-0 14093707 P201264 Npsr1 ProximalPromoter P201264 ProximalPromoter Unique Tile chr9:23847120-23848201 (+) NM_175678 + 223 23848424 319239 Npsr1 9330128H10Rik|GPRA|Gpr154|PGR14|VRR1 neuropeptide S receptor 1 MGI:2441738 Mm.130824 9 9 A3-A4 NPSR1 387129 0 gggaaaccatgatcaaaatacga tccactaaggagcaattgggata 3 16 12 1.1.1.3.12.16 BCBC-5A-0 14093726 P205318 ProximalPromoter P205318 ProximalPromoter Unique Tile chr5:136770376-136771453 (-) 0 gccttcttggccttctagttctc tgttcttcttgaattctcggctc 3 16 13 1.1.1.3.13.16 BCBC-5A-0 14093745 P205495 Foxa2 ProximalPromoter P205495 ProximalPromoter Unique Tile chr2:147737280-147738244 (-) NM_010446 - 1130 147738410 15376 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 MGI:1347476 Mm.938 2 2 G2|2 84.0 cM FOXA2 3170 0 ttgttgttttgacagggaatgtg gtagtagctgctccagtcggatg 3 16 14 1.1.1.3.14.16 BCBC-5A-0 14093764 P206050 Ptpn21 ProximalPromoter P206050 ProximalPromoter Unique Tile chr12:99135828-99136738 (-) NM_011877 - 184 99135644 24000 Ptpn21 MGC107492|PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 MGI:1344406 Mm.4420 12 12 F1 PTPN21 11099 NM_001008506;NM_029334; + 11279 99148017 75553 Zc3h14 1 attatagcacacacacacacccg ttttgaggccgtatccacataac 3 16 15 1.1.1.3.15.16 BCBC-5A-0 14093783 P200494 BC063749 ProximalPromoter P200494 ProximalPromoter Unique Tile chr19:47972817-47973780 (-) NM_001001738 - 225 47972592 414801 BC063749 KIAA1754|mKIAA1754 cDNA sequence BC063749 MGI:3042776 Mm.29457 19 19 D1 KIAA1754 85450 NM_026619 + 49245 47923572 68214 Gsto2 0 tgcattgaaagcactaaccttga ggaataaagagggagacaaggga 3 16 16 1.1.1.3.16.16 BCBC-5A-0 14093802 P207855 Slc25a30 ProximalPromoter P207855 ProximalPromoter Unique Tile chr14:74521418-74522418 (-) NM_026232 - 226 74521192 67554 Slc25a30 4933433D23Rik|AW319655|KMCP1 solute carrier family 25, member 30 MGI:1914804 Mm.46067 14 14 D2 SLC25A30 253512 NM_177381 - 32748 74488670 338337 Cog3 0 ggctgaataaatcccctttgaat ggaagccacagactcttcttcag 3 16 17 1.1.1.3.17.16 BCBC-5A-0 14093821 P207921 6530403A03Rik ProximalPromoter P207921 ProximalPromoter Unique Tile chr13:38211254-38212207 (+) NM_026382 + 197 38212404 67797 6530403A03Rik 1110050F08Rik|C6orf151 RIKEN cDNA 6530403A03 gene MGI:1915047 Mm.250783 13 13 A5 C6orf151 154007 0 gccaatgaccacctagtgatttc ctgctccttcgatgtttttagga 3 16 18 1.1.1.3.18.16 BCBC-5A-0 14093840 P001679 Blank P001679 Buffer Control Negative Blank 3 16 19 1.1.1.3.19.16 BCBC-5A-0 14093499 P100960 Ptpn18 ProximalPromoter P100960 ProximalPromoter Unique Tile chr1:34403034-34403968 (+) NM_011206 + 335 34404303 19253 Ptpn18 FLP1|HSCF|PTP-HSCF|PTP-K1|Ptpk1 protein tyrosine phosphatase, non-receptor type 18 MGI:108410 Mm.361 1 1 B|1 17.3 cM PTPN18 26469 NM_178601 + 18570 34384464 27993 Imp4 0 cgaactcagaaatccacctgc aggtcggggacttcgaataaa 3 17 1 1.1.1.3.1.17 BCBC-5A-0 14093518 P101800 Derl1 ProximalPromoter P101800 ProximalPromoter Unique Tile chr15:57723078-57724150 (-) NM_024207 - 547 57722531 67819 Derl1 1110021N07Rik|AI195141|AW551338|Derlin-1 Der1-like domain family, member 1 MGI:1915069 Mm.289387 15 15 D2 DERL1 79139 0 ccatgtgggtgctaggaagag acatgatctggttcattgggg 3 17 2 1.1.1.3.2.17 BCBC-5A-0 14093537 P102561 Rit1 ProximalPromoter P102561 ProximalPromoter Unique Tile chr3:88800459-88801522 (+) NM_009069 + 1268 88802790 19769 Rit1 RIBB|ROC1|Rit Ras-like without CAAX 1 MGI:108053 Mm.4009 3 3 F1 RIT1 6016 NM_028814 + 28715 88771744 74200 2810403A07Rik 0 ctttgtgggttctttttcacacc caggcatcaggaatacaaatggt 3 17 3 1.1.1.3.3.17 BCBC-5A-0 14093556 P103683 Epha1 ProximalPromoter P103683 ProximalPromoter Unique Tile chr6:42302945-42303976 (-) NM_023580 - 70 42302875 13835 Epha1 5730453L17Rik|AL033318|Eph|Esk Eph receptor A1 MGI:107381 Mm.133330 6 6 B2.1 EPHA1 2041 NM_011777 + 23082 42279863 22793 Zyx 0 cacttcccctccagtacaatgac tggttcaccttcttaaagggaca 3 17 4 1.1.1.3.4.17 BCBC-5A-0 14093575 P104337 Ins2 DistalPromoter P104337 DistalPromoter Unique Tile chr7:142489825-142491805 (-) NM_008387 - 727 142489098 16334 Ins2 AA986540|Ins-2|Mody|Mody4|proinsulin insulin II MGI:96573 Mm.4946 7 7 F5|7 69.1 cM INS 3630 NM_010514 - 20946 142468879 16002 Igf2 0 aacttgagcaaggtcttcaaccc ctgatttggcactgtcctgtttc 3 17 5 1.1.1.3.5.17 BCBC-5A-0 14093594 P107069 Anxa7 DistalPromoter P107069 DistalPromoter Unique Tile chr14:19262755-19264861 (-) NM_009674 - 5613 19268368 11750 Anxa7 AI265384|AI316497|Anx7|synexin annexin A7 MGI:88031 Mm.280231 14 14 A2|14 2.5 cM ANXA7 310 0 actcaacaaagggacctgaaagc acatccctcccttagctgtcaac 3 17 6 1.1.1.3.6.17 BCBC-5A-0 14093613 P105339 Otog DistalPromoter P105339 DistalPromoter Unique Tile chr7:46107581-46109402 (-) NM_013624 + 374 46109028 18419 Otog 4932420K09|Otgn|twt otogelin MGI:1202064 Mm.8020 7 7 B4-C|7 28.0 cM OTOG 340990 NM_153677;NM_023649; - 1047 46106534 72088 Ush1c 0 cagagaaggtttccttccttcca atgggatgcaatcctctttcaat 3 17 7 1.1.1.3.7.17 BCBC-5A-0 14093632 P106179 Wdr54 DistalPromoter P106179 DistalPromoter Unique Tile chr6:83122736-83124535 (-) NM_023790 - 711 83122025 75659 Wdr54 1700030E05Rik|D3Mm3e|MGC102039 WD repeat domain 54 MGI:1922909 Mm.130665 6 6 D1 WDR54 84058 NM_007835 + 7073 83131608 13191 Dctn1 2 ctcccgagtagagtagagcaggc cctggctggtctagaactcacaa 3 17 8 1.1.1.3.8.17 BCBC-5A-0 14093651 P203499 Ddx46 ProximalPromoter P203499 ProximalPromoter Unique Tile chr13:55661420-55662431 (+) NM_145975 + 101 55662532 212880 Ddx46 2200005K02Rik|AI325430|AI957095|MGC116676|MGC31579|mKIAA0801 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 MGI:1920895 Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346; Mm.202725; Mm.392552; Mm.426346 13 13 B2 DDX46 9879 NM_007596 + 28717 55632703 12328 Caml 0 acatacacgtcgtgcagtcagtt tgtggactgctgtgtgctatctt 3 17 9 1.1.1.3.9.17 BCBC-5A-0 14093670 P202795 Umps ProximalPromoter P202795 ProximalPromoter Unique Tile chr16:33898320-33899261 (-) NM_009471 - 11570 33886750 22247 Umps 1700095D23Rik|AA408257|AL033308|BB164745 uridine monophosphate synthetase MGI:1298388 Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378; Mm.13145; Mm.398378 16 16 B3 UMPS 7372 2 catgtcactctgtcctcaccaag gtcatggactcaccctttgaaac 3 17 10 1.1.1.3.10.17 BCBC-5A-0 14093689 P202101 Runx1t1 ProximalPromoter P202101 ProximalPromoter Unique Tile chr4:13677857-13678927 (+) NM_009822 + 33001 13711928 12395 Runx1t1 Cbfa2t1h|ETO|MTG8 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) MGI:104793 Mm.399718; Mm.4909; Mm.399718; Mm.4909; Mm.399718; Mm.4909; Mm.399718; Mm.4909; Mm.399718; Mm.4909; Mm.399718; Mm.4909; Mm.399718; Mm.4909; Mm.399718; Mm.4909; Mm.399718; Mm.4909; Mm.399718; Mm.4909; Mm.399718; Mm.4909 4 4 A|4 4.4 cM RUNX1T1 862 2 gggggaaggttgtatctctctgt ccaattaaagataaggcccttgg 3 17 11 1.1.1.3.11.17 BCBC-5A-0 14093708 P201288 Gabrg2 ProximalPromoter P201288 ProximalPromoter Unique Tile chr11:41843950-41845026 (-) NM_177408;NM_008073; - 5 41843955 14406 Gabrg2 AI851231|BB128510|GABAA-R|Gabrg-2|gamma2 gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 MGI:95623 Mm.5309 11 11 A5|11 19.0 cM GABRG2 2566 0 tgagacaattacctcccctgtgt agataccatcaaagcgtcagctc 3 17 12 1.1.1.3.12.17 BCBC-5A-0 14093727 P205251 Ccnd2 ProximalPromoter P205251 ProximalPromoter Unique Tile chr6:127117718-127118626 (-) NM_009829 - 1051 127116667 12444 Ccnd2 2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1 cyclin D2 MGI:88314 Mm.333406 6 6 F3|6 61.1 cM CCND2 894 NM_177003 - 42563 127075155 319801 9630033F20Rik 0 gaaacccatcttgattaaacccc gtgctctaaagcatcctgtggtc 3 17 13 1.1.1.3.13.17 BCBC-5A-0 14093746 P205519 Ifnar2 ProximalPromoter P205519 ProximalPromoter Unique Tile chr16:91260512-91261458 (+) NM_010509 + 299 91261757 15976 Ifnar2 AI747302|Ifnar-2 interferon (alpha and beta) receptor 2 MGI:1098243 Mm.6834 16 16 C3.3|16 63.1 cM IFNAR2 3455 NM_008349 + 33726 91295184 16155 Il10rb 2 aactacctccccttctcttccct gatgcgggtgtgtactctcttct 3 17 14 1.1.1.3.14.17 BCBC-5A-0 14093765 P206075 Anxa10 ProximalPromoter P206075 ProximalPromoter Unique Tile chr8:65015141-65016110 (-) NM_011922 - 94 65015235 26359 Anxa10 - annexin A10 MGI:1347090 Mm.42179 8 8 B3.1|8 32.0 cM ANXA10 11199 0 agaggtggcagaatgatggtaaa gagtgtactcacatattccccgc 3 17 15 1.1.1.3.15.17 BCBC-5A-0 14093784 P200519 Olfr701 ProximalPromoter P200519 ProximalPromoter Unique Tile chr7:106606656-106607641 (+) NM_028910 + 151 106607792 66786 Olfr701 4932441H21Rik|4933433E02Rik|MGC123418|MOR283-1 olfactory receptor 701 MGI:3030535 Mm.159186 7 7 E3 NM_146600 - 6547 106600109 258593 Olfr700 0 agtcccacttctttcagccttct aaattgcctttgctcttcatcag 3 17 16 1.1.1.3.16.17 BCBC-5A-0 14093803 P210594 Adprhl1 ProximalPromoter P210594 ProximalPromoter Unique Tile chr8:13254457-13255365 (-) NM_172750 - 318 13254139 234072 Adprhl1 Arh2|D330008N11Rik ADP-ribosylhydrolase like 1 MGI:2442168 Mm.132785 8 8 A1.1 ADPRHL1 113622 NM_175323 - 9799 13265164 102220 E330037G11Rik 0 agagtccttggacctcactcctt aggcccacccattgtagttttat 3 17 17 1.1.1.3.17.17 BCBC-5A-0 14093822 P207946 Tmem100 ProximalPromoter P207946 ProximalPromoter Unique Tile chr11:89845174-89846265 (+) NM_026433 + 172 89846437 67888 Tmem100 1810057C19Rik|AV011897 transmembrane protein 100 MGI:1915138 Mm.212428 11 11 C TMEM100 55273 NM_008796 - 26219 89818955 18559 Pctp 0 aacaaagtgctagccaccagaag gaagagtaatagatagcggcgca 3 17 18 1.1.1.3.18.17 BCBC-5A-0 14093841 P001679 Blank P001679 Buffer Control Negative Blank 3 17 19 1.1.1.3.19.17 BCBC-5A-0 14093500 P100984 Sub1 ProximalPromoter P100984 ProximalPromoter Unique Tile chr15:11941295-11942279 (-) NM_011294 - 565 11940730 20024 Sub1 AI842364|P15|P9|Pc4|Rpo2tc1 SUB1 homolog (S. cerevisia MGI:104811 Mm.41746 15 15 A2 SUB1 10923 0 aggaagtcagggctggaactc cattggggatctggttttcaa 3 18 1 1.1.1.3.1.18 BCBC-5A-0 14093519 P101734 Nit2 ProximalPromoter P101734 ProximalPromoter Unique Tile chr16:57088957-57089864 (-) NM_023175 - 266 57088691 52633 Nit2 1190017B19Rik|D16Ertd502e nitrilase family, member 2 MGI:1261838 Mm.383203 16 16 C1.1|16 38.0 cM NIT2 56954 NM_138599 + 45885 57043072 28185 Tomm70a 0 ttcctccagcgcatacattct agggccttcaaaagcaaagtc 3 18 2 1.1.1.3.2.18 BCBC-5A-0 14093538 P102585 Slc4a2 ProximalPromoter P102585 ProximalPromoter Unique Tile chr5:23934461-23935381 (+) NM_009207 + 2 23935383 20535 Slc4a2 Ae2|B3RP solute carrier family 4 (anion exchanger), member 2 MGI:109351 Mm.4580 5 5 A3|5 14.0 cM SLC4A2 6522 NM_007668 - 866 23933595 12568 Cdk5 1 ccacagacagttgctacacttgg acttctcccaactcaactttccc 3 18 3 1.1.1.3.3.18 BCBC-5A-0 14093557 P103707 Atp6v1g1 ProximalPromoter P103707 ProximalPromoter Unique Tile chr4:63029987-63030943 (+) NM_024173 + 254 63031197 66290 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 MGI:1913540 Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471; Mm.29868; Mm.371615; Mm.396471 4 4 C1 ATP6V1G1 9550 NM_144905 + 15644 63046587 230279 6330416G13Rik 0 gtcactgtgtttgtggaggtcag ctcttttgcaactgtcaaaggct 3 18 4 1.1.1.3.4.18 BCBC-5A-0 14093576 P104361 Mcm6 DistalPromoter P104361 DistalPromoter Unique Tile chr1:130188477-130190596 (-) NM_008567 - 1267 130187210 17219 Mcm6 ASP-l1|D1Wsu22e|Mcmd6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) MGI:1298227 Mm.4933 1 1 E4|1 66.6 cM MCM6 4175 1 agctgccagaaagtttaacctgg atggacttgccagtgagagtgag 3 18 5 1.1.1.3.5.18 BCBC-5A-0 14093595 P104907 Brd7 DistalPromoter P104907 DistalPromoter Unique Tile chr8:91253713-91255822 (-) NM_012047 - 1455 91252258 26992 Brd7 BP75|CELTIX1|Ptpn13ip bromodomain containing 7 MGI:1349766 Mm.5400 8 8 C4 BRD7 29117 0 tccttttggggttgaattgactt agaacacttgctgctcttccaga 3 18 6 1.1.1.3.6.18 BCBC-5A-0 14093614 P105363 DistalPromoter P105363 DistalPromoter Unique Tile chr16:24441701-24443739 (+) 0 gcaagctggagcaaggaataact tttggggagggaactctactcag 3 18 7 1.1.1.3.7.18 BCBC-5A-0 14093633 P106201 Rps27a DistalPromoter P106201 DistalPromoter Unique Tile chr11:29449227-29451038 (-) NM_001033865;NM_024277; - 1187 29448040 78294 Rps27a 0610006J14Rik ribosomal protein S27a MGI:1925544 Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253; Mm.180003; Mm.350435; Mm.389253 11 11 A3.3 RPS27A 6233 NM_133767 + 22763 29426464 76784 Mtif2 0 tctggatttgattccagcaccta aaaccaactctagcaagttgccc 3 18 8 1.1.1.3.8.18 BCBC-5A-0 14093652 P203524 Lyplal1 ProximalPromoter P203524 ProximalPromoter Unique Tile chr1:187818283-187819331 (-) NM_146106 - 185 187818098 226791 Lyplal1 BC027340|MGC28394|Q96AVO lysophospholipase-like 1 MGI:2385115 Mm.257116 1 1 H5 LYPLAL1 127018 0 ccttcttttactgcctgtctgga ttctaaagctcaggatcacccag 3 18 9 1.1.1.3.9.18 BCBC-5A-0 14093671 P202728 Ptpn13 ProximalPromoter P202728 ProximalPromoter Unique Tile chr5:103664658-103665564 (+) NM_011204 + 36870 103702434 19249 Ptpn13 AI324989|PTP-BL|Ptpri|RIP protein tyrosine phosphatase, non-receptor type 13 MGI:103293 Mm.3414 5 5 E-F|5 56.0 cM PTPN13 5783 0 caagatgctattctgctcgtgaa gagaactgtgaccatggtgtgtc 3 18 10 1.1.1.3.10.18 BCBC-5A-0 14093690 P202125 Snapc3 ProximalPromoter P202125 ProximalPromoter Unique Tile chr4:82887639-82888709 (+) NM_029949 + 265 82888974 77634 Snapc3 1810020H02Rik|4930558A07Rik|5031401C21Rik|AI414457|E030018J20Rik small nuclear RNA activating complex, polypeptide 3 MGI:1916338 Mm.271985 4 4 C3 SNAPC3 6619 0 cttcaaactccctctgaaggtga attgggtccccatctcatagttt 3 18 11 1.1.1.3.11.18 BCBC-5A-0 14093709 P201312 Wipi1 ProximalPromoter P201312 ProximalPromoter Unique Tile chr11:109427320-109428411 (-) NM_145940 - 151 109427471 52639 Wipi1 4930533H01Rik|AW411817|D11Ertd498e|MGC36416 WD repeat domain, phosphoinositide interacting 1 MGI:1261864 Mm.35817 11 11 E1|11 68.0 cM WIPI1 55062 NM_021880 + 38236 109466647 19084 Prkar1a 1 gggttttcagtaaatcgggtagg tacgtgcagtcttggttgaaaga 3 18 12 1.1.1.3.12.18 BCBC-5A-0 14093728 P205275 Cga ProximalPromoter P205275 ProximalPromoter End Repeat Tile chr4:35081472-35082520 (+) NM_009889 + 145 35082665 12640 Cga CG-alpha|FSHA|GPHA1|GPHalpha|HCG|LHA|MGC107283|Tsha|aGSU|alpha-GSU|alphaGSU|alphaSU glycoprotein hormones, alpha subunit MGI:88390 Mm.1361 4 4 A5|4 10.5 cM CGA 1081 1 cacacacacacacacacacacac catatcacattgcaaccctcaga 3 18 13 1.1.1.3.13.18 BCBC-5A-0 14093747 P201554 Dpp9 ProximalPromoter P201554 ProximalPromoter Unique Tile chr17:55852665-55853565 (-) NM_172624 - 68 55852597 224897 Dpp9 6430584G11Rik|A330078I11|DPRP2 dipeptidylpeptidase 9 MGI:2443967 Mm.205535 17 17 C DPP9 91039 NM_080837 - 35036 55817629 28106 D17Wsu104e 0 ccctgttaggataacttttgggg gaaccaacgtccgtgaaactcta 3 18 14 1.1.1.3.14.18 BCBC-5A-0 14093766 P206099 Ncdn ProximalPromoter P206099 ProximalPromoter Unique Tile chr4:126255885-126256889 (-) NM_011986 - 233 126255652 26562 Ncdn AU042419|MMS10-AE|Ms10ae|mKIAA0607|norbin neurochondrin MGI:1347351 Mm.422605 4 4 D2.1 NCDN 23154 NM_001035526;NM_133886;NM_001035525; + 27 126255858 100317 AU040320 2 acagcttctattgtcagttgggc agtgctcgagctaaggaggaaag 3 18 15 1.1.1.3.15.18 BCBC-5A-0 14093785 P200543 4930563D23Rik ProximalPromoter P200543 ProximalPromoter Unique Tile chr16:92210111-92211018 (-) NM_029252 - 156 92210267 75328 4930563D23Rik - RIKEN cDNA 4930563D23 gene MGI:1922578 Mm.72970 16 16 C4 NM_138743 + 19934 92190177 68936 1190017O12Rik 0 gagaaagtgaagcaaactgccat agtttccccaaaatacacggtct 3 18 16 1.1.1.3.16.18 BCBC-5A-0 14093804 P210618 Pla2g3 ProximalPromoter P210618 ProximalPromoter Unique Tile chr11:3387079-3387984 (+) NM_172791 + 245 3388229 237625 Pla2g3 9130003P18Rik phospholipase A2, group III MGI:2444945 Mm.100476 11 11 A1 PLA2G3 50487 NM_172439 - 16840 3404824 170835 Pib5pa 0 tttaaactctctcagccctgtgg tttggagccagaagagagttcag 3 18 17 1.1.1.3.17.18 BCBC-5A-0 14093823 P207879 4930522H14Rik ProximalPromoter P207879 ProximalPromoter Unique Tile chr4:109029195-109030238 (-) NM_026291 - 34 109029229 67646 4930522H14Rik 1700007J23Rik RIKEN cDNA 4930522H14 gene MGI:1914896 Mm.45820 4 4 C7 C1orf185 284546 0 agttgcatgccacctagagattc tgatgccataaaagctgtctgaa 3 18 18 1.1.1.3.18.18 BCBC-5A-0 14093842 P001775 Cy3 Anchor P001775 Anchor Control Positive Cy3 Anchor 3 18 19 1.1.1.3.19.18 BCBC-5A-0 14093501 P101008 St6galnac4 ProximalPromoter P101008 ProximalPromoter Unique Tile chr2:32407364-32408449 (+) NM_011373 + 1049 32409498 20448 St6galnac4 MGC102103|Siat7d ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 MGI:1341894 Mm.27446 2 2 B ST6GALNAC4 27090 NM_198191 + 9529 32397835 227733 Pip5kl1 0 gcctgaggctatgagggaagt tcaaggtgtatgccaccactg 3 19 1 1.1.1.3.1.19 BCBC-5A-0 14093520 P101758 Npc2 ProximalPromoter P101758 ProximalPromoter Unique Tile chr12:85662861-85663881 (-) NM_023409 - 1 85662860 67963 Npc2 2700012J19Rik|AA408070|AU045843|HE1 Niemann Pick type C2 MGI:1915213 Mm.282556 12 12 D2 NPC2 10577 0 gccatctctccagccctagtt tattggtaccgacccacttcg 3 19 2 1.1.1.3.2.19 BCBC-5A-0 14093539 P102891 Il11ra1 ProximalPromoter P102891 ProximalPromoter Duplication Tile chr4:42332899-42333859 (-) NM_010549 - 444 42332455 16157 Il11ra1 AI314697|GP130|Il11ra|NR1 interleukin 11 receptor, alpha chain 1 MGI:107426 Mm.193451 4 4 A5|4 12.7 cM IL11RA 3590 NM_010550 - 2466 42336325 16158 Il11ra2 0 ttggagaatgaagctactgggag gaccaaggctaattatcgcctct 3 19 3 1.1.1.3.3.19 BCBC-5A-0 14093558 P103731 Luzp1 ProximalPromoter P103731 ProximalPromoter Unique Tile chr4:135792159-135793129 (+) NM_024452 + 338 135793467 269593 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 MGI:107629 Mm.92659 4 4 D3 LUZP1 7798 0 gaaagggaacttagggaaaagca gaaatcaactaaacgcccaagtg 3 19 4 1.1.1.3.4.19 BCBC-5A-0 14093577 P104385 Neo1 DistalPromoter P104385 DistalPromoter Unique Tile chr9:58835803-58837903 (-) NM_008684 - 1241 58834562 18007 Neo1 2610028H22Rik|AI327052|D930014N22Rik neogenin MGI:1097159 Mm.42249 9 9 B NEO1 4756 0 caaactctcttcaaccaggctca agtgaaattaggagccctccctt 3 19 5 1.1.1.3.5.19 BCBC-5A-0 14093596 P104931 Hsp110 DistalPromoter P104931 DistalPromoter Unique Tile chr5:149905601-149907600 (-) NM_013559 - 1004 149904597 15505 Hsp110 105kDa|AI790491|Hsp105|hsp-E7I heat shock protein 110 MGI:105053 Mm.270681 5 5 G3|5 88.0 cM HSPH1 10808 0 gtgggagggagactgattgaact aaccctgccactcctaaccataa 3 19 6 1.1.1.3.6.19 BCBC-5A-0 14093615 P105297 Pex19 DistalPromoter P105297 DistalPromoter Unique Tile chr1:173959840-173962007 (+) NM_023041 + 1439 173963446 19298 Pex19 Pxf peroxisome biogenesis factor 19 MGI:1334458 Mm.247764 1 1 H3|1 93.6 cM PEX19 5824 NM_153555 + 22751 173984758 98193 Wdr42a 0 acattgtctgaggtccttcctcc agcagcttttcctcctcagtcag 3 19 7 1.1.1.3.7.19 BCBC-5A-0 14093634 P105628 DistalPromoter P105628 DistalPromoter No Hits Tile 1 agggaggatgtggagtctcattc tcaaagatatgggacacaaaggc 3 19 8 1.1.1.3.8.19 BCBC-5A-0 14093653 P203548 Rhbg ProximalPromoter P203548 ProximalPromoter Unique Tile chr3:88340485-88341504 (-) NM_021375 - 126 88340611 58176 Rhbg - Rhesus blood group-associated B glycoprotein MGI:1927379 Mm.103777 3 3 F1|3 42.0 cM RHBG 57127 NM_009836 + 41557 88383061 12462 Cct3 0 gatctctggtctttcatgtgcct aagatagcaaagaggagggcagt 3 19 9 1.1.1.3.9.19 BCBC-5A-0 14093672 P202752 Asxl2 ProximalPromoter P202752 ProximalPromoter Unique Tile chr12:3425862-3426930 (+) NM_172421 + 30 3426900 75302 Asxl2 4930556B16Rik|mKIAA1685 additional sex combs like 2 (Drosophila) MGI:1922552 Mm.120475 12 12 A1.1 ASXL2 55252 1 tgttctggatattcaggagggtg gctgccatattgggttcttactg 3 19 10 1.1.1.3.10.19 BCBC-5A-0 14093691 P203790 Lhfpl1 ProximalPromoter P203790 ProximalPromoter Unique Tile chrX:140595295-140596326 (-) NM_178358 - 33 140595262 237091 Lhfpl1 Lhfp lipoma HMGIC fusion partner-like 1 MGI:1891214 Mm.135547 X X F2 LHFPL1 340596 0 cttccctttcaatgtatggcttg gcctgaaaaccttgctttacctt 3 19 11 1.1.1.3.11.19 BCBC-5A-0 14093710 P201336 Fastkd2 ProximalPromoter P201336 ProximalPromoter Unique Tile chr1:63664106-63665066 (+) NM_172422 + 140 63664926 75619 Fastkd2 2810421I24Rik FAST kinase domains 2 MGI:1922869 Mm.30965 1 1 C2 FASTKD2 22868 NM_029696 - 472 63664594 76668 Mdh1b 0 cacatccaggtcctccattagac aaacttaagacccaggccacttc 3 19 12 1.1.1.3.12.19 BCBC-5A-0 14093729 P205300 Cox6a2 ProximalPromoter P205300 ProximalPromoter Unique Tile chr7:127997316-127998238 (-) NM_009943 - 169 127997485 12862 Cox6a2 COXVIaH|VIaH cytochrome c oxidase, subunit VI a, polypeptide 2 MGI:104649 Mm.43824 7 7 F3|7 61.0 cM COX6A2 1339 NM_146205 + 30266 128028504 233912 Armc5 2 atgagatctgatgccctcttctg aaagagaacagatcggctaggct 3 19 13 1.1.1.3.13.19 BCBC-5A-0 14093748 P201578 Ly9 ProximalPromoter P201578 ProximalPromoter Unique Tile chr1:173444224-173445311 (-) NM_008534 - 216 173444008 17085 Ly9 AI893573|CD229|Lgp100|Ly-9|SLAMF3|T100 lymphocyte antigen 9 MGI:96885 Mm.560 1 1 H3|1 93.3 cM LY9 4063 NM_144539 - 40303 173485614 75345 Slamf7 0 taagatggcctgcaaaggattta cctgcaaggaaattgtaaaccag 3 19 14 1.1.1.3.14.19 BCBC-5A-0 14093767 P206030 Mab21l2 ProximalPromoter P206030 ProximalPromoter Unique Tile chr3:86634229-86635169 (-) NM_011839 - 19 86634210 23937 Mab21l2 - mab-21-like 2 (C. elegans) MGI:1346022 Mm.389466 3 3 F1 MAB21L2 10586 0 cccctcctttacacatacacagc cagcgtgctagtctcctctcttc 3 19 15 1.1.1.3.15.19 BCBC-5A-0 14093786 P200567 Phf14 ProximalPromoter P200567 ProximalPromoter Unique Tile chr6:11874815-11875736 (+) NM_029404 + 144 11875880 75725 Phf14 1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|KIAA0783|mKIAA0783 PHD finger protein 14 MGI:1923539 Mm.212411 6 6 A2 PHF14 9678 NM_010886 - 17369 11857446 17992 Ndufa4 0 tatttcccacccccattagactt gtgggagtgaaaactggtacagc 3 19 16 1.1.1.3.16.19 BCBC-5A-0 14093805 P210642 Vwa2 ProximalPromoter P210642 ProximalPromoter Unique Tile chr19:56926425-56927440 (+) NM_172840 + 225 56927665 240675 Vwa2 Amaco von Willebrand factor A domain containing 2 MGI:2684334 Mm.129534 19 19 D2 VWA2 340706 NM_001002238;NM_001002241;NM_031387;NM_001002240; + 34014 56892411 83561 Tdrd1 1 ttggcatttacaggaatactggg aactattgctccagggaaccg 3 19 17 1.1.1.3.17.19 BCBC-5A-0 14093824 P207903 4921537D05Rik ProximalPromoter P207903 ProximalPromoter Unique Tile chr10:94118182-94119218 (-) NM_029852 + 630 94118588 77048 4921537D05Rik 2600001G24Rik|5730513H21Rik RIKEN cDNA 4921537D05 gene MGI:1924298 Mm.296971 10 10 C2 2 tcccacagttcagaccttacctc aagtgtgacaagggcacagagtc 3 19 18 1.1.1.3.18.19 BCBC-5A-0 14093843 P001871 Cy3 Anchor P001871 Anchor Control Positive Cy3 Anchor 3 19 19 1.1.1.3.19.19 BCBC-5A-0 14093844 P100000 Pzp ProximalPromoter P100000 ProximalPromoter Unique Tile chr6:128492973-128494020 (-) NM_007376 - 641 128492332 11287 Pzp A1m|A2m|AI893533|MAM pregnancy zone protein MGI:87854 Mm.260144 6 6 F1-G3|6 62.0 cM PZP 5858 2 tgttctctcctctgccacaca attttccttccctctcctccc 4 1 1 1.1.1.4.1.1 BCBC-5A-0 14093863 P100840 ProximalPromoter P100840 ProximalPromoter No Hits Tile 0 attcctccgaggctgaaagac tggaccttgaagaggaagcag 4 1 2 1.1.1.4.2.1 BCBC-5A-0 14093882 P101590 Dnajb10 ProximalPromoter P101590 ProximalPromoter Unique Tile chr1:75118121-75119168 (+) NM_020266;NM_178055; + 448 75119616 56812 Dnajb10 2700059H22Rik|Hsj1|MGC113758|mDj8 DnaJ (Hsp40) homolog, subfamily B, member 10 MGI:1928739 Mm.248776 1 1 C3 DNAJB2 3300 NM_009447 - 15720 75102401 22145 Tuba4 0 gtgcctgcacccttagatcag ttctccacactgtcagagcca 4 1 3 1.1.1.4.3.1 BCBC-5A-0 14093901 P102723 Cflar ProximalPromoter P102723 ProximalPromoter Unique Tile chr1:58669510-58670432 (+) NM_009805;NM_207653; + 12570 58657862 12633 Cflar CLARP|Cash|Casper|FLAME|Flip|I-FLICE|MGC103395|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator MGI:1336166 Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848; Mm.11778; Mm.28347; Mm.336848 1 1 C1.3|1 30.1 cM CFLAR 8837 NM_175370 - 29009 58640501 108812 Als2cr12 0 tccgcagttaggttaaagctctg gggccttgtgaataagaagaggt 4 1 4 1.1.1.4.4.1 BCBC-5A-0 14093920 P103473 B4galt6 ProximalPromoter P103473 ProximalPromoter Unique Tile chr18:20889840-20890788 (-) NM_019737 - 426 20889414 56386 B4galt6 AA536803|AU022389 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 MGI:1928380 Mm.26364 18 18 A2 B4GALT6 9331 0 cacattctctccttcccctttct cacatgttcccagcatattgtgt 4 1 5 1.1.1.4.5.1 BCBC-5A-0 14093939 P104313 Hbb-y DistalPromoter P104313 DistalPromoter Unique Tile chr7:103728175-103730005 (-) NM_008221 - 1147 103727028 15135 Hbb-y Ey|Hby hemoglobin Y, beta-like embryonic chain MGI:96027 Mm.288567 7 7 E3|7 49.95 cM HBE1 3046 NM_008219 - 11192 103716983 15132 Hbb-bh1 0 caagtacccaagtagcctgcctt ttggtcacagtttggctttccta 4 1 6 1.1.1.4.6.1 BCBC-5A-0 14093958 P104859 Coro1c DistalPromoter P104859 DistalPromoter Unique Tile chr5:114171198-114173176 (-) NM_011779 - 1493 114169705 23790 Coro1c AL022675|AW455561|AW548837|MGC102522 coronin, actin binding protein 1C MGI:1345964 Mm.260158 5 - CORO1C 23603 0 cctccccctttgatcactaattg ggaaccaggagtcctctgaaaaa 4 1 7 1.1.1.4.7.1 BCBC-5A-0 14093977 P107459 Atp2a3 DistalPromoter P107459 DistalPromoter Unique Tile chr11:72774258-72776315 (+) NM_016745 + 1107 72777422 53313 Atp2a3 SERCA3b|Serca3 ATPase, Ca++ transporting, ubiquitous MGI:1194503 Mm.6306 11 11 B4 ATP2A3 489 NM_008771 + 39021 72815336 18436 P2rx1 0 cctgggctacacagagaaacctt acttttatggccgtgtctccttc 4 1 8 1.1.1.4.8.1 BCBC-5A-0 14093996 P105638 Ankrd37 DistalPromoter P105638 DistalPromoter Unique Tile chr8:47494525-47496584 (+) NM_001039562 - 4142 47498667 654824 Ankrd37 - ankyrin repeat domain 37 MGI:3603344 Mm.334517 8 8 B1.1 ANKRD37 353322 NM_026278 + 12834 47509418 67620 Lrp2bp 0 cagagccagagacagctgttagc ttccagaatgtgccaggtttcta 4 1 9 1.1.1.4.9.1 BCBC-5A-0 14094015 P203669 Vegfb ProximalPromoter P203669 ProximalPromoter Unique Tile chr19:7054760-7055790 (-) NM_011697 - 87 7054673 22340 Vegfb VEGF-B|Vrf vascular endothelial growth factor B MGI:106199 Mm.15607 19 19 B VEGFB 7423 NM_020566 - 3526 7059316 57431 Dnajc4 0 ggacagccaaggctatacagaga atgtgacctaaacacgcgctc 4 1 10 1.1.1.4.10.1 BCBC-5A-0 14094034 P202873 Rab3b ProximalPromoter P202873 ProximalPromoter Unique Tile chr4:108375919-108376877 (+) NM_023537 + 124 108377001 69908 Rab3b 2610528C18Rik RAB3B, member RAS oncogene family MGI:1917158 Mm.41580 4 4 C7 RAB3B 5865 NM_029571 + 30131 108345788 100087 Kti12 0 gctgataagcagctctagcgaac gcccacattctatagtttgcacc 4 1 11 1.1.1.4.11.1 BCBC-5A-0 14094053 P202457 2210421G13Rik ProximalPromoter P202457 ProximalPromoter Unique Tile chr15:77360615-77361696 (-) NM_175391 - 45 77360570 108956 2210421G13Rik - RIKEN cDNA 2210421G13 gene MGI:1920912 Mm.86391 15 15 E1 2 aagagacaccataaccaaggcaa ggaaagagaaagccccatttcta 4 1 12 1.1.1.4.12.1 BCBC-5A-0 14094072 P205155 Adcy8 ProximalPromoter P205155 ProximalPromoter End Repeat Tile chr15:64751487-64752386 (-) NM_009623 - 346 64751833 11514 Adcy8 AC8|AW060868 adenylate cyclase 8 MGI:1341110 Mm.1425 15 15 D1|15 37.5 cM ADCY8 114 1 cacacacacacacacacacacac atgaagctctctcttcggttcct 4 1 13 1.1.1.4.13.1 BCBC-5A-0 14094091 P204452 Gcnt2 ProximalPromoter P204452 ProximalPromoter Unique Tile chr13:40896807-40897894 (+) NM_008105;NM_133219;NM_023887; + 245 40898139 14538 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme MGI:1100870 Mm.314757 13 13 A5|13 17.0 cM GCNT2 2651 0 accactttacaaaatggctgcat actgcctctctcttctgctgtgt 4 1 14 1.1.1.4.14.1 BCBC-5A-0 14094110 P206855 Pex3 ProximalPromoter P206855 ProximalPromoter Unique Tile chr10:13243214-13244189 (-) NM_019961 - 8 13243222 56535 Pex3 1700014F15Rik|2810027F19Rik|2900010N04Rik peroxisomal biogenesis factor 3 MGI:1929646 Mm.282711 10 10 A PEX3 8504 NM_025748 + 220 13243434 66757 Deadc1 0 catgttcacagaatgaaaaccca aaaccacagacgtttctctgagc 4 1 15 1.1.1.4.15.1 BCBC-5A-0 14094129 P206934 Terf2ip ProximalPromoter P206934 ProximalPromoter Unique Tile chr8:114897007-114897904 (+) NM_020584 + 162 114898066 57321 Terf2ip - telomeric repeat binding factor 2, interacting protein MGI:1929871 Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067; Mm.213064; Mm.390067 8 8 E1 TERF2IP 54386 NM_053092 - 35 114897939 85305 Kars 0 gcagaaacacagccataaaaagg gcgagcagaaactaagcaagaag 4 1 16 1.1.1.4.16.1 BCBC-5A-0 14094148 P200391 Dtx2 ProximalPromoter P200391 ProximalPromoter Unique Tile chr5:136278672-136279582 (+) NM_023742 + 79 136279503 74198 Dtx2 2610524D08Rik|AA408415|AU022494|Deltex2 deltex 2 homolog (Drosophila) MGI:1921448 Mm.275574 5 5 G2 DTX2 113878 NM_011776 + 13926 136264746 22788 Zp3 1 tttttcgagacagggtttctctg gaagcagaaggaacaggttgaga 4 1 17 1.1.1.4.17.1 BCBC-5A-0 14094167 P209499 AW491445 ProximalPromoter P209499 ProximalPromoter Unique Tile chr19:5877490-5878572 (+) NM_134154 + 100 5878472 107375 AW491445 - expressed sequence AW491445 MGI:2147731 Mm.5323 19 19 A NM_026169 - 2225 5875265 67457 1200004M23Rik 0 tcatccttggttttcacgaatct acccgataacctcccactaatgt 4 1 18 1.1.1.4.18.1 BCBC-5A-0 14094186 P208896 Gimap3 ProximalPromoter P208896 ProximalPromoter Unique Tile chr6:48700709-48701616 (-) NM_031247 - 272 48700437 83408 Gimap3 2010110D23Rik|Gimap5|Ian4 GTPase, IMAP family member 3 MGI:1932723 Mm.333050 6 6 B2.3 NM_175035 + 24828 48675881 317757 Gimap5 0 ccctgagttctgtgaggaagaaa tagatggaatttgaggtggcagt 4 1 19 1.1.1.4.19.1 BCBC-5A-0 14093845 P100024 Apc ProximalPromoter P100024 ProximalPromoter Unique Tile chr18:34384111-34385192 (+) NM_007462 + 39408 34345784 11789 Apc AI047805|AU020952|AW124434|Min adenomatosis polyposis coli MGI:88039 Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883; Mm.384171; Mm.7883 18 18 B1|18 15.0 cM APC 324 0 gatcacagccacctggaactc gaaaggttaaggtggatgccc 4 2 1 1.1.1.4.1.2 BCBC-5A-0 14093864 P100774 Fkbp5 ProximalPromoter P100774 ProximalPromoter Unique Tile chr17:28169260-28170269 (-) NM_010220 - 44417 28213677 14229 Fkbp5 51kDa|D17Ertd592e|Dit1|FKBP51 FK506 binding protein 5 MGI:104670 Mm.276405 17 17 A3.3|17 13.0 cM FKBP5 2289 0 gttgtgttgctagaggcccac tcgctcctacttcaggcactc 4 2 2 1.1.1.4.2.2 BCBC-5A-0 14093883 P101614 Fbxo3 ProximalPromoter P101614 ProximalPromoter Unique Tile chr2:103827906-103828819 (+) NM_212433;NM_020593; + 83 103828736 57443 Fbxo3 1200002G09Rik|1700026K02Rik|AI046358|Fba F-box only protein 3 MGI:1929084 Mm.143768 2 2 E2 FBXO3 26273 NM_175161 - 328 103829147 70986 4931422A03Rik 1 aggccggttcagaaaagaaag caccgccccattacttgatta 4 2 3 1.1.1.4.3.2 BCBC-5A-0 14093902 P102747 Tpp1 ProximalPromoter P102747 ProximalPromoter Unique Tile chr7:105626352-105627346 (-) NM_009906 - 324 105626028 12751 Tpp1 Cln2|TPP-I tripeptidyl peptidase I MGI:1336194 Mm.20837 7 7 E3|7 50.0 cM TPP1 1200 NM_020024 - 8192 105618160 24075 Taf10 0 cctcagcttcagcactcagtaca agaaatgtgcctcatacttggga 4 2 4 1.1.1.4.4.2 BCBC-5A-0 14093921 P103497 Ncoa6 ProximalPromoter P103497 ProximalPromoter Unique Tile chr2:155129448-155130515 (-) NM_019825 - 119 155129567 56406 Ncoa6 AIB3|ASC-2|ASC2|MGC90663|NRC|Ncoa7|PRIP|RAP250|mKIAA0181 nuclear receptor coactivator 6 MGI:1929915 Mm.27592 2 - NCOA6 23054 0 catcttcagcctcctcattttct agtcaaactccacctctgagtcg 4 2 5 1.1.1.4.5.2 BCBC-5A-0 14093940 P104427 Pmp22 DistalPromoter P104427 DistalPromoter Unique Tile chr11:62943893-62946077 (+) NM_008885 + 1629 62947706 18858 Pmp22 22kDa|Gas-3|HNPP|Tr|trembler peripheral myelin protein MGI:97631 Mm.1237 11 11 B3|11 34.45 cM PMP22 5376 0 tggaccctactgagatcattgga actgcggcaatggaagtaaatct 4 2 6 1.1.1.4.6.2 BCBC-5A-0 14093959 P104883 Ubl3 DistalPromoter P104883 DistalPromoter Unique Tile chr5:148864320-148866257 (-) NM_011908 - 1182 148863138 24109 Ubl3 AW108023|HCG ubiquitin-like 3 MGI:1344373 Mm.21846 5 5 G2-3 UBL3 5412 1 tgaggagtaggggaggagagttg acgggacacttcagaggacctac 4 2 7 1.1.1.4.7.2 BCBC-5A-0 14093978 P107480 Corin DistalPromoter P107480 DistalPromoter Unique Tile chr5:72784617-72786710 (-) NM_016869 - 1009 72783608 53419 Corin AV273130|Lrp4|MGC118735 corin MGI:1349451 Mm.332425 5 5 C3.2 CORIN 10699 0 ggagatttccttgtgagccagtt aatgggtactttgcttccgaaaa 4 2 8 1.1.1.4.8.2 BCBC-5A-0 14093997 P106344 Sfrs6 DistalPromoter P106344 DistalPromoter Unique Tile chr2:162619779-162621683 (+) NM_026499 + 1302 162622985 67996 Sfrs6 1210001E11Rik|AI314910|AW146126 splicing factor, arginine/serine-rich 6 MGI:1915246 Mm.24042 2 2 H2|2 79.8 cM SFRS6 6431 0 tccggtttacaagctgttgttgt caagttgtcctctgacctcctga 4 2 9 1.1.1.4.9.2 BCBC-5A-0 14094016 P203602 B3gat1 ProximalPromoter P203602 ProximalPromoter Unique Tile chr9:26499876-26500795 (+) NM_029792 + 212 26501007 76898 B3gat1 0710007K08Rik|AI846286|GlcAT-P|HNK-1|KIAA4235|mKIAA4235 beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) MGI:1924148 Mm.218788 9 9 A4 B3GAT1 27087 0 tgttttggttggccataactttc cttcccttgagaagcagacacat 4 2 10 1.1.1.4.10.2 BCBC-5A-0 14094035 P202897 A930041I02Rik ProximalPromoter P202897 ProximalPromoter Unique Tile chr2:39012838-39013826 (-) NM_178778 - 99 39012739 320271 A930041I02Rik 9330112M16|AI662729 RIKEN cDNA A930041I02 gene MGI:2443716 Mm.204836 2 2 B C9orf126 286205 NM_024209 - 34522 39048348 67857 Ppp6c 0 caccttttactctgctgagccat gtatctagaaatccgaccgctga 4 2 11 1.1.1.4.11.2 BCBC-5A-0 14094054 P202481 4932413O14Rik ProximalPromoter P202481 ProximalPromoter Unique Tile chr5:93750259-93751222 (-) NM_177230 - 70 93750329 320696 4932413O14Rik - RIKEN cDNA 4932413O14 gene MGI:2444555 Mm.209991 5 5 E2 FLJ25770 339965 NM_015756 + 7416 93758638 27428 Shroom3 1 ttgtatctctcatcttccgcctc tacctgctaacaacacctagccc 4 2 12 1.1.1.4.12.2 BCBC-5A-0 14094073 P205179 Ap3s1 ProximalPromoter P205179 ProximalPromoter Unique Tile chr18:46866437-46867415 (+) NM_009681 + 150 46867265 11777 Ap3s1 MGC117528|[s]3A adaptor-related protein complex 3, sigma 1 subunit MGI:1337062 Mm.312536 18 18 C AP3S1 1176 NM_026217 - 443 46866880 67526 Atg12 2 ccagtgagggctgttctctaaaa cacatagggctggtagaacttgg 4 2 13 1.1.1.4.13.2 BCBC-5A-0 14094092 P204759 Slc22a18 ProximalPromoter P204759 ProximalPromoter Unique Tile chr7:143282335-143283316 (+) NM_008767 + 106 143283210 18400 Slc22a18 AW260131|BWR1A|BWSCR1A|HET|ITM|Impt1|Orctl2|Slc22a1l|TSSC5|p45-BWR1A solute carrier family 22 (organic cation transporter), member 18 MGI:1336884 Mm.271740 7 7 F5|7 69.5 cM SLC22A18 5002 NM_009876 - 11949 143270386 12577 Cdkn1c 0 tcaacaagatcaaggcaatagca ggttgagtaagactgcctcagga 4 2 14 1.1.1.4.14.2 BCBC-5A-0 14094111 P206880 Gcn5l2 ProximalPromoter P206880 ProximalPromoter Unique Tile chr11:100528649-100529608 (-) NM_020004;NM_001038010; - 105 100528544 14534 Gcn5l2 1110051E14Rik|AW212720 GCN5 general control of amino acid synthesis-like 2 (yeast) MGI:1343101 Mm.218837 11 11 D|11 61.4 cM GCN5L2 2648 NM_030150 - 8288 100520361 80861 D11Lgp2e 0 ccaggaagaactatccctgacct ttcttggttccagacaaccaaat 4 2 15 1.1.1.4.15.2 BCBC-5A-0 14094130 P206958 Cxcl10 ProximalPromoter P206958 ProximalPromoter Unique Tile chr5:93424129-93425111 (-) NM_021274 - 73 93424056 15945 Cxcl10 C7|CRG-2|INP10|IP-10|IP10|Ifi10|Scyb10|gIP-10|mob-1 chemokine (C-X-C motif) ligand 10 MGI:1352450 Mm.877 5 5 E2|5 53.0 cM CXCL10 3627 NM_019494 - 13355 93438466 56066 Cxcl11 0 ttctgtctgtccttccagattcc ctgagtcctgattggctgacttt 4 2 16 1.1.1.4.16.2 BCBC-5A-0 14094149 P200415 Srfbp1 ProximalPromoter P200415 ProximalPromoter Unique Tile chr18:52589775-52590840 (+) NM_026040 + 244 52591084 67222 Srfbp1 2810036K01Rik|p49/STRAP serum response factor binding protein 1 MGI:1914472 Mm.100617 18 18 D1 SRFBP1 153443 0 ctggcaacctaatcatggacttc gacctaaggagaggcgaatgttt 4 2 17 1.1.1.4.17.2 BCBC-5A-0 14094168 P209433 Tbrg4 ProximalPromoter P209433 ProximalPromoter Unique Tile chr11:6525914-6526828 (-) NM_134011 - 112 6526026 21379 Tbrg4 2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|TB-12|mKIAA0948 transforming growth factor beta regulated gene 4 MGI:1100868 Mm.247761 11 11 A1 TBRG4 9238 NM_011709 - 11824 6538652 22373 Wap 0 tagcactgggattactgggaaaa ggtccttactaactgctgccctt 4 2 18 1.1.1.4.18.2 BCBC-5A-0 14094187 P208921 Otof ProximalPromoter P208921 ProximalPromoter End Repeat Tile chr5:30738619-30739690 (-) NM_031875 - 136 30738483 83762 Otof - otoferlin MGI:1891247 Mm.244502 5 - OTOF 9381 NM_029285 + 2964 30742654 75434 1700001C02Rik 1 tgccctgactcttacaagtttcc tgtgtgtgtgtgtgtgtgtgtgt 4 2 19 1.1.1.4.19.2 BCBC-5A-0 14093846 P100048 Bach2 ProximalPromoter P100048 ProximalPromoter Unique Tile chr4:32566079-32567017 (+) NM_007521 + 545 32567562 12014 Bach2 MGC117590 BTB and CNC homology 2 MGI:894679 Mm.270304 4 - BACH2 60468 0 tgcctcacctgaaaccagaat ccttgaaagtcagggcttgtg 4 3 1 1.1.1.4.1.3 BCBC-5A-0 14093865 P100798 Got2 ProximalPromoter P100798 ProximalPromoter Unique Tile chr8:98777320-98778393 (-) NM_010325 - 174 98777494 14719 Got2 AL022787|FABP-pm|Got-2|MGC102129|MGC115763|mAspAT glutamate oxaloacetate transaminase 2, mitochondrial MGI:95792 Mm.230169 8 8 D1|8 46.0 cM GOT2 2806 NM_172758 - 34700 98742620 234595 BC031853 0 attaaaggcatgcaccaccac ctgcatctctgtatccctcgg 4 3 2 1.1.1.4.2.3 BCBC-5A-0 14093884 P101920 Atpbd4 ProximalPromoter P101920 ProximalPromoter Unique Tile chr2:114346796-114347833 (-) NM_025675 - 402 114346394 66632 Atpbd4 5730421E18Rik ATP binding domain 4 MGI:1913882 Mm.117809 2 2 E5 ATPBD4 89978 1 tgctcttccagaggtcctgag cttcgaggtttgcatctctgc 4 3 3 1.1.1.4.3.3 BCBC-5A-0 14093903 P102771 ProximalPromoter P102771 ProximalPromoter No Hits Tile 0 aaaaacccactgtctagtgccag tttctccataggaggaagtgctg 4 3 4 1.1.1.4.4.3 BCBC-5A-0 14093922 P103521 Pfdn5 ProximalPromoter P103521 ProximalPromoter Unique Tile chr15:102153031-102153938 (+) NM_027044 + 211 102154149 56612 Pfdn5 1190001O17Rik|1700010A06Rik|D15Ertd697e|Eig1|MM-1 prefoldin 5 MGI:1928753 Mm.158264 15 15 F3|15 61.7 cM PFDN5 5204 NM_021713 + 5805 102159743 60315 Myg1 2 atgagatctgatgccctcttctg ccaggagctacaacaaacattcc 4 3 5 1.1.1.4.5.3 BCBC-5A-0 14093941 P104451 Rab23 DistalPromoter P104451 DistalPromoter Unique Tile chr1:33665207-33667013 (+) NM_008999 + 2456 33664557 19335 Rab23 AW545388|opb|opb2 RAB23, member RAS oncogene family MGI:99833 Mm.86744 1 1 B|1 18.5 cM RAB23 51715 NM_145392 - 35264 33702277 213539 Bag2 0 catgtgtgatttgggataggctc actcagcgacagaagaaggaggt 4 3 6 1.1.1.4.6.3 BCBC-5A-0 14093960 P104817 Tbxas1 DistalPromoter P104817 DistalPromoter Unique Tile chr6:38844961-38847107 (+) NM_011539 + 1485 38848592 21391 Tbxas1 CYP5|CYP5A1|THAS|TS|TXAS|TXS thromboxane A synthase 1, platelet MGI:98497 Mm.4054 6 6 F1-pter|6 20.5 cM TBXAS1 6916 NM_010433 - 39401 38805560 15258 Hipk2 0 tggaagccattctctcacttcag gagaaatgttgatcgtggcaaag 4 3 7 1.1.1.4.7.3 BCBC-5A-0 14093979 P107502 DistalPromoter P107502 DistalPromoter Unique Tile chr11:8240472-8242529 (-) 0 ggagccctgtagcacattttctt acaagacctgcaccaactgacat 4 3 8 1.1.1.4.8.3 BCBC-5A-0 14093998 P106365 Blvra DistalPromoter P106365 DistalPromoter Unique Tile chr2:126768758-126770710 (+) NM_026678 + 8603 126762107 109778 Blvra 0610006A11Rik|2500001N03Rik|Blvr biliverdin reductase A MGI:88170 Mm.22028 2 2 F3|2 62.0 cM BLVRA 644 0 gtgctgtactgagcctttcgtgt aacacagctctgacaaaccttgc 4 3 9 1.1.1.4.9.3 BCBC-5A-0 14094017 P203626 Efna5 ProximalPromoter P203626 ProximalPromoter Unique Tile chr17:62566833-62567893 (-) NM_010109;NM_207654; - 54 62566779 13640 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 MGI:107444 Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978; Mm.401670; Mm.428534; Mm.7978 17 17 E1.1|17 33.5 cM EFNA5 1946 1 atctctacaagttgctggggttg ggagaagaatcacaagacggaga 4 3 10 1.1.1.4.10.3 BCBC-5A-0 14094036 P202241 Lrrc16 ProximalPromoter P202241 ProximalPromoter Unique Tile chr13:24288268-24289213 (-) NM_026825 - 8 24288260 68732 Lrrc16 1110037D04Rik|AI425970|CARMIL|D130057M20 leucine rich repeat containing 16 MGI:1915982 Mm.211047 13 13 A3.2 LRRC16 55604 1 tgggttgggtaaaattgaatcag tcctaagagttgaaaatccgagc 4 3 11 1.1.1.4.11.3 BCBC-5A-0 14094055 P202505 Tgoln1 ProximalPromoter P202505 ProximalPromoter Unique Tile chr6:72546400-72547478 (-) NM_009443 - 109 72546509 22134 Tgoln1 AU015504|D6Ertd384e|TGN38|TGN38A|Ttgn1 trans-golgi network protein MGI:105080 Mm.246563 6 6 C1|6 31.5 cM NM_009444 - 143 72546257 22135 Tgoln2 0 aacaagacctgattccctcttcc cggaagtcaagtccagctcttta 4 3 12 1.1.1.4.12.3 BCBC-5A-0 14094074 P205203 B2m ProximalPromoter P205203 ProximalPromoter Unique Tile chr2:121838219-121839256 (+) NM_009735 + 84 121839172 12010 B2m Ly-m11|beta2-m beta-2 microglobulin MGI:88127 Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473; Mm.163; Mm.267473 2 2 F1-F3|2 69.0 cM B2M 567 NM_080510 + 12884 121852140 70928 Rnf36 0 cctcttcctacccttcctcactc gaggcactcactctggatagcat 4 3 13 1.1.1.4.13.3 BCBC-5A-0 14094093 P204784 Pex7 ProximalPromoter P204784 ProximalPromoter Unique Tile chr10:19597285-19598233 (-) NM_008822 - 220 19597065 18634 Pex7 MmPEX7 peroxisome biogenesis factor 7 MGI:1321392 Mm.338363 10 10 A3 PEX7 5191 NM_008580 + 25665 19623898 26408 Map3k5 0 tccagttactgttgcttgggaat gttcacgtttaattgcaacctcc 4 3 14 1.1.1.4.14.3 BCBC-5A-0 14094112 P206813 B230317C12Rik ProximalPromoter P206813 ProximalPromoter Unique Tile chr2:26449287-26450187 (+) NM_019833 + 293 26450480 56279 B230317C12Rik AB030186|AW209000|PIP49 RIKEN cDNA B230317C12 gene MGI:1927576 Mm.279863 2 2 A3 FAM69B 138311 NM_026212 - 23068 26426219 67512 Agpat2 0 gcgataatgaaacaatcccatgt caccttttcaagggtaaaagacg 4 3 15 1.1.1.4.15.3 BCBC-5A-0 14094131 P206983 Acp1 ProximalPromoter P206983 ProximalPromoter Unique Tile chr12:31497495-31498433 (-) NM_021330 - 96 31497591 11431 Acp1 4632432E04Rik|AI427468|Acp-1|LMW-PTP|MGC103115|MGC132904 acid phosphatase 1, soluble MGI:87881 Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726; Mm.207496; Mm.359831; Mm.399726 12 12 A2 ACP1 52 NM_013709 + 225 31497720 24057 Sh3yl1 0 gatttacaaaaggatccgtgcag acttcagggtcccaaagaaaaag 4 3 16 1.1.1.4.16.3 BCBC-5A-0 14094150 P200439 Usp43 ProximalPromoter P200439 ProximalPromoter Unique Tile chr11:67737614-67738660 (+) NM_173754 - 571 67738185 216835 Usp43 9130017K11Rik|B930051C24|C630032K07Rik ubiquitin specific peptidase 43 MGI:2444541 Mm.158885 11 11 B3 USP43 124739 NM_027963 - 43176 67781836 71860 Wdr16 0 agtgtctaccgaagacctacccc cacgaccagaaacttagccagag 4 3 17 1.1.1.4.17.3 BCBC-5A-0 14094169 P209457 Akr1c18 ProximalPromoter P209457 ProximalPromoter Unique Tile chr13:4150126-4151155 (-) NM_134066 - 249 4149877 105349 Akr1c18 AW146047 aldo-keto reductase family 1, member C18 MGI:2145420 Mm.41337 13 13 A1 NM_013778 + 39278 4190433 27384 Akr1c13 0 ggggaagaaatgtctgtgatttg gctttatgagagaccgagggatt 4 3 18 1.1.1.4.18.3 BCBC-5A-0 14094188 P207584 Lgals2 ProximalPromoter P207584 ProximalPromoter Unique Tile chr15:78682895-78683824 (-) NM_025622 - 111 78682784 107753 Lgals2 2200008F12Rik|AI324147 lectin, galactose-binding, soluble 2 MGI:895068 Mm.390793 15 15 E1 LGALS2 3957 NM_027219 + 12982 78669913 104445 Cdc42ep1 0 gaccccaactaccacaaaattca atatgcaggcactcactcaacaa 4 3 19 1.1.1.4.19.3 BCBC-5A-0 14093847 P100072 Capn6 ProximalPromoter P100072 ProximalPromoter Unique Tile chrX:139066808-139067826 (-) NM_007603 - 6855 139073663 12338 Capn6 - calpain 6 MGI:1100850 Mm.30290 X X F2 CAPN6 827 0 atgccagaggaaaatcgttca gagcttcagaggaggacccat 4 4 1 1.1.1.4.1.4 BCBC-5A-0 14093866 P100822 H2afx ProximalPromoter P100822 ProximalPromoter Unique Tile chr9:44084082-44085044 (+) NM_010436 + 665 44085709 15270 H2afx AW228881|H2A.X|H2ax|Hist5-2ax H2A histone family, member X MGI:102688 Mm.245931 9 9 A5.2|9 26.0 cM H2AFX 3014 NM_007875 + 5900 44078182 13478 Dpagt1 2 cgttaccaactcgtccgactc ttctctgagtagccctgcctg 4 4 2 1.1.1.4.2.4 BCBC-5A-0 14093885 P101944 Tax1bp1 ProximalPromoter P101944 ProximalPromoter Unique Tile chr6:52642076-52643010 (+) NM_025816 + 315 52643325 52440 Tax1bp1 1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151 Tax1 (human T-cell leukemia virus type I) binding protein 1 MGI:1289308 Mm.389757 6 6 B3|6 26.0 cM TAX1BP1 8887 0 caggatgtcttcaccctggag ccatcatattcccgtgttgct 4 4 3 1.1.1.4.3.4 BCBC-5A-0 14093904 P102705 Bag1 ProximalPromoter P102705 ProximalPromoter Unique Tile chr4:41137351-41138428 (-) NM_009736 - 424 41136927 12017 Bag1 Rap46 Bcl2-associated athanogene 1 MGI:108047 Mm.688 4 4 B1 BAG1 573 NM_029814 + 89 41137262 76959 Chmp5 0 tcccattacatgtcatcagcatc ggcatttgactttgcatacctct 4 4 4 1.1.1.4.4.4 BCBC-5A-0 14093923 P103545 1300007B12Rik ProximalPromoter P103545 ProximalPromoter Unique Tile chr1:136178831-136179879 (-) NM_020588;NM_001042485; - 421 136178410 57439 1300007B12Rik 1700020N19Rik RIKEN cDNA 1300007B12 gene MGI:1914729 Mm.18230 1 1 E4 C1orf37 92703 NM_173771 + 22471 136202350 240755 4933406M09Rik 0 ccattctaaccccacaactcttg gagatgctgcctgaaaaatgagt 4 4 5 1.1.1.4.5.4 BCBC-5A-0 14093942 P104475 S100a10 DistalPromoter P104475 DistalPromoter Unique Tile chr3:93636677-93638858 (+) NM_009112 + 1709 93640567 20194 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) MGI:1339468 Mm.1 3 3 F1-F2|3 41.7 cM S100A10 6281 NM_016740 + 30757 93605920 20195 S100a11 1 tggctgaaggtgaaggaaataca attgacccaaataccacattccc 4 4 6 1.1.1.4.6.4 BCBC-5A-0 14093961 P104841 Ufd1l DistalPromoter P104841 DistalPromoter Unique Tile chr16:18722944-18724943 (+) NM_011672 + 945 18725888 22230 Ufd1l Ufd1 ubiquitin fusion degradation 1 like MGI:109353 Mm.237594 16 16 B1-B4|16 11.75 cM UFD1L 7353 NM_009862 - 251 18725194 12544 Cdc45l 0 tacaacactttgaaggccaagga acgtttgcttctacagagggtcc 4 4 7 1.1.1.4.7.4 BCBC-5A-0 14093980 P105387 Akap3 DistalPromoter P105387 DistalPromoter Unique Tile chr6:126815833-126817938 (-) NM_009650 + 824 126818762 11642 Akap3 - A kinase (PRKA) anchor protein 3 MGI:1341149 Mm.87748 6 6 F3 AKAP3 10566 NM_025358 - 1089 126814744 66108 Ndufa9 0 acttccctgatgtttgaagaggc cctgcctataatcccagctcttg 4 4 8 1.1.1.4.8.4 BCBC-5A-0 14093999 P106387 Chic2 DistalPromoter P106387 DistalPromoter Unique Tile chr5:75327589-75329452 (-) NM_028850 - 1276 75326313 74277 Chic2 1700081B18Rik|4930502K01Rik|BTL cysteine-rich hydrophobic domain 2 MGI:1921527 Mm.239814 5 5 D CHIC2 26511 NM_133256 + 27845 75357297 14843 Gsh2 2 ttgtagatcaacctggccttgaa cctactgtgtggtcagctgtgtg 4 4 9 1.1.1.4.9.4 BCBC-5A-0 14094018 P203651 Fkbp9 ProximalPromoter P203651 ProximalPromoter Unique Tile chr6:56760566-56761526 (+) NM_012056 + 110 56761636 27055 Fkbp9 1810014L23|AW549641|FKBP60|FKBP63 FK506 binding protein 9 MGI:1350921 Mm.20943 6 6 B3|6 28.0 cM FKBP9 11328 0 aaggtcaactcaaaatggacgaa gatcccaagagacgatatggaga 4 4 10 1.1.1.4.10.4 BCBC-5A-0 14094037 P202265 Traf3ip2 ProximalPromoter P202265 ProximalPromoter Unique Tile chr10:39301284-39302382 (+) NM_134000 + 33 39302349 103213 Traf3ip2 AI429613|Act1 Traf3 interacting protein 2 MGI:2143599 Mm.295265 10 10 B1 TRAF3IP2 10758 1 ctacagccatttctgacgtgatg gcggtcttcacactgcttattct 4 4 11 1.1.1.4.11.4 BCBC-5A-0 14094056 P202439 Snapc2 ProximalPromoter P202439 ProximalPromoter Unique Tile chr8:4251929-4252870 (+) NM_133968 + 231 4253101 102209 Snapc2 0610007H10Rik|AU015675 small nuclear RNA activating complex, polypeptide 2 MGI:1914861 Mm.28452 8 8 A1.1 SNAPC2 6618 NM_183315 - 6340 4259210 330695 Ctxn1 0 aggcccacgtaaggtagtacaca ttgcttttcatagagaagtgggc 4 4 12 1.1.1.4.12.4 BCBC-5A-0 14094075 P205227 Calm1 ProximalPromoter P205227 ProximalPromoter Unique Tile chr12:100599475-100600374 (+) NM_009790 + 216 100600590 12313 Calm1 AI256814|AI327027|AI461935|AL024000|CaM|Calm calmodulin 1 MGI:88251 Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885; Mm.285993; Mm.430885 12 12 E CALM1 801 2 aagatcaaattctgcgctttgtc ctgcaagagtcctctagagctgg 4 4 13 1.1.1.4.13.4 BCBC-5A-0 14094094 P204808 Pola1 ProximalPromoter P204808 ProximalPromoter Unique Tile chrX:89885084-89886101 (-) NM_008892 - 210 89884874 18968 Pola1 AW321876|Pola polymerase (DNA directed), alpha 1 MGI:99660 Mm.1923 X X C-D|X 34.0 cM POLA 5422 NM_177546;NM_211138; + 21480 89907581 236899 Pcyt1b 0 ttttgggaatgggttttataggc gggagctgaaaagaaacctccta 4 4 14 1.1.1.4.14.4 BCBC-5A-0 14094113 P206837 Sumo3 ProximalPromoter P206837 ProximalPromoter Unique Tile chr10:77049125-77050063 (+) NM_019929 + 58 77050005 20610 Sumo3 2810014B19Rik|AA409334|AW121497|AW536077|D10Ertd345e|SMT3A|SUMO-3|Smt3h1 SMT3 suppressor of mif two 3 homolog 3 (yeast) MGI:1336201 Mm.24433 10 10 C1|10 41.6 cM SUMO3 6612 NM_019803 + 15973 77066036 22213 Ube2g2 2 tccagaaacagcaaatggtaggt gcttaccttgggcttctcttcc 4 4 15 1.1.1.4.15.4 BCBC-5A-0 14094132 P201070 Zcchc6 ProximalPromoter P201070 ProximalPromoter Unique Tile chr13:59833013-59834094 (-) NM_153538 - 289 59832724 214290 Zcchc6 6030448M23Rik|AA420405|MGC38585 zinc finger, CCHC domain containing 6 MGI:2387179 Mm.233082 13 13 B2 ZCCHC6 79670 0 ctcagccccctcattctcttaat gctgggtctttttataattccga 4 4 16 1.1.1.4.16.4 BCBC-5A-0 14094151 P200464 Metapl1 ProximalPromoter P200464 ProximalPromoter Unique Tile chr2:71253005-71253953 (+) NM_025633 + 223 71254176 66559 Metapl1 2310066F24Rik|3110033D18Rik|AV117938 methionine aminopeptidase-like 1 MGI:1913809 Mm.152796 2 2 C2 MAP1D 254042 0 ttctccgatttgaggtttgtgat atcagggatggaagaaagtcgtc 4 4 17 1.1.1.4.17.4 BCBC-5A-0 14094170 P209481 Stk38 ProximalPromoter P209481 ProximalPromoter Unique Tile chr17:28735506-28736477 (-) NM_134115 - 98 28735604 106504 Stk38 5830476G13Rik|9530097A09Rik|AA617404|Ndr1 serine/threonine kinase 38 MGI:2442572 Mm.255075 17 17 A3.3 STK38 11329 NM_013663 + 23862 28760339 20383 Sfrs3 1 ccagcctggtctacaaagtgagt aggacaggacaaaaggaagaacc 4 4 18 1.1.1.4.18.4 BCBC-5A-0 14094189 P207608 Gpatc4 ProximalPromoter P207608 ProximalPromoter Unique Tile chr3:88128121-88129168 (+) NM_025663 + 118 88129050 66614 Gpatc4 2610029K21Rik G patch domain containing 4 MGI:1913864 Mm.46029 3 3 F1 NM_022031 - 14754 88113367 73940 Hapln2 1 tttttcgagacagggtttctctg gggtggaactactctccgatctt 4 4 19 1.1.1.4.19.4 BCBC-5A-0 14093848 P100006 Acta2 ProximalPromoter P100006 ProximalPromoter Unique Tile chr19:34318644-34319728 (-) NM_007392 - 2673 34321317 11475 Acta2 0610041G09Rik|Actvs|a-SMA actin, alpha 2, smooth muscle, aorta MGI:87909 Mm.213025 19 19 C3 ACTA2 59 NM_007987 + 36934 34356662 14102 Fas 0 gctgaagaaacccattttccc cagacagggttcttggtcctg 4 5 1 1.1.1.4.1.5 BCBC-5A-0 14093867 P100846 Ilk ProximalPromoter P100846 ProximalPromoter Unique Tile chr7:105609376-105610353 (+) NM_010562 + 215 105610568 16202 Ilk AA511515|ESTM24 integrin linked kinase MGI:1195267 Mm.274846 7 7 E1 ILK 3611 NM_025897 - 16 105610337 101867 1500003O22Rik 0 agtgagttccaggacagccag gccgctctagctaccacagaa 4 5 2 1.1.1.4.2.5 BCBC-5A-0 14093886 P101968 Polr3k ProximalPromoter P101968 ProximalPromoter Unique Tile chr2:181792620-181793719 (+) NM_025901 + 132 181793851 67005 Polr3k 12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11 polymerase (RNA) III (DNA directed) polypeptide K MGI:1914255 Mm.306482 2 2 H4 POLR3K 51728 NM_153594 + 22008 181770612 245867 Pcmtd2 0 ggatgctgcttactggtttgc ccattggtcaccgcagataat 4 5 3 1.1.1.4.3.5 BCBC-5A-0 14093905 P102729 Cct6b ProximalPromoter P102729 ProximalPromoter Unique Tile chr11:82580606-82581643 (-) NM_009839 - 105 82580501 12467 Cct6b CCTzeta-2|Cctz-2 chaperonin subunit 6b (zeta) MGI:1329013 Mm.4126 11 11 B5 CCT6B 10693 NM_025884 + 53 82580553 66983 Ccdc16 0 ctttaccctccagtcctgagaca cgagtggtgaatcaggaagaact 4 5 4 1.1.1.4.4.5 BCBC-5A-0 14093924 P103851 1200007D18Rik ProximalPromoter P103851 ProximalPromoter Unique Tile chr17:26287665-26288686 (+) NM_026170 + 425 26289111 67458 1200007D18Rik MGC102406 RIKEN cDNA 1200007D18 gene MGI:1914708 Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942; Mm.30496; Mm.427942 17 17 B1 0 cctacatgggtgtcctagtttgc tgcttcttaggaaaagccatctg 4 5 5 1.1.1.4.5.5 BCBC-5A-0 14093943 P104499 Slc1a5 DistalPromoter P104499 DistalPromoter Unique Tile chr7:15937040-15939072 (+) NM_009201 + 856 15939928 20514 Slc1a5 AAAT|ASCT2|ATBO|M7V1|M7VS1|MGC46952|R16|RDRC|Slc1a7 solute carrier family 1 (neutral amino acid transporter), member 5 MGI:105305 Mm.1056 7 - SLC1A5 6510 NM_001039878;NM_133789; + 35756 15974828 97387 Strn4 0 ttacccactgtgccatctcctta ggaagaggaggaggaaagaggtc 4 5 6 1.1.1.4.6.5 BCBC-5A-0 14093962 P104865 Fiz1 DistalPromoter P104865 DistalPromoter Unique Tile chr7:4618257-4620149 (-) NM_011813 - 526 4617731 23877 Fiz1 AI790204|FLJ00416|MGC117900|mFLJ00416 Flt3 interacting zinc finger protein 1 MGI:1344336 Mm.38911 7 7 A1 FLJ14768 84922 NM_025324 + 336 4618593 66056 Zfp524 1 tctcctcctccctcaaacctatg ccggtacctgtatttgattgggt 4 5 7 1.1.1.4.7.5 BCBC-5A-0 14093981 P105411 1810036H07Rik DistalPromoter P105411 DistalPromoter Unique Tile chr6:87336119-87337988 (+) NM_025467 + 1010 87338998 66284 1810036H07Rik - RIKEN cDNA 1810036H07 gene MGI:1913534 Mm.46446 6 6 D2 GDDR 200504 NM_025466 - 19570 87316549 66283 Gkn1 2 ccaacttcacactgacagaggct taaccgtctgctgcctcatttta 4 5 8 1.1.1.4.8.5 BCBC-5A-0 14094000 P106331 1810059G22Rik DistalPromoter P106331 DistalPromoter Unique Tile chr19:8842518-8844683 (-) NM_026325 - 1006 8841512 67706 1810059G22Rik 0610031L02Rik|1500003K22Rik|MGC151338|MGC151340 RIKEN cDNA 1810059G22 gene MGI:1914956 Mm.45155 19 19 A LOC374395 374395 NM_025791 + 4473 8838045 66836 0610006I08Rik 2 tccactgagccactctttgaaac ttgtccagtaagtgggcagatgt 4 5 9 1.1.1.4.9.5 BCBC-5A-0 14094019 P203675 Fasn ProximalPromoter P203675 ProximalPromoter Unique Tile chr11:120640189-120641196 (-) NM_007988 - 2 120640191 14104 Fasn A630082H08Rik|FAS fatty acid synthase MGI:95485 Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658; Mm.236443; Mm.427658 11 11 E2|11 72.0 cM FASN 2194 NM_026824 - 27704 120612485 68730 Dus1l 2 ccaaccctgagaagtctgtgtct gtctctctggctccctctaggc 4 5 10 1.1.1.4.10.5 BCBC-5A-0 14094038 P202289 Rgs6 ProximalPromoter P202289 ProximalPromoter Unique Tile chr12:83535120-83536066 (+) NM_015812 + 181 83535885 50779 Rgs6 - regulator of G-protein signaling 6 MGI:1354730 Mm.153013 12 12 D1|12 36.5 cM RGS6 9628 1 aatcacgtttcaggactctcagg ttctcctcctcttccaccttctt 4 5 11 1.1.1.4.11.5 BCBC-5A-0 14094057 P202463 Supt3h ProximalPromoter P202463 ProximalPromoter Unique Tile chr17:44238955-44239959 (+) NM_178652 + 266 44240225 109115 Supt3h 2310066G22Rik|AI315192|SPT3|SPT3L suppressor of Ty 3 homolog (S. cerevisiae) MGI:1923723 Mm.391013 17 17 B3 SUPT3H 8464 NM_009820 - 37723 44277682 12393 Runx2 0 cacaagacaattgcaatccagag gatctgcactgggagaaggtcta 4 5 12 1.1.1.4.12.5 BCBC-5A-0 14094076 P203204 Myo10 ProximalPromoter P203204 ProximalPromoter Unique Tile chr15:25566096-25567142 (+) NM_019472 + 508 25567650 17909 Myo10 AW048724|D15Ertd600e|mKIAA0799 myosin X MGI:107716 Mm.60590 15 15 C|15 9.2 cM MYO10 4651 0 cagaaagactgccctggaaagta gctctcaaatatacccaaacccc 4 5 13 1.1.1.4.13.5 BCBC-5A-0 14094095 P204832 Proc ProximalPromoter P204832 ProximalPromoter Unique Tile chr18:32281348-32282445 (-) NM_008934 - 139 32281209 19123 Proc PC protein C MGI:97771 Mm.2786 18 18 B3 PROC 5624 NM_011946 + 23653 32306098 26405 Map3k2 2 gcgtttatttcacaagttcctgg cagaaagggagggagaaagagag 4 5 14 1.1.1.4.14.5 BCBC-5A-0 14094114 P206861 Hacl1 ProximalPromoter P206861 ProximalPromoter Unique Tile chr14:30470129-30471186 (-) NM_019975 - 159 30469970 56794 Hacl1 1600020H07Rik|Hpcl|Phyh2 2-hydroxyacyl-CoA lyase 1 MGI:1929657 Mm.38887 14 14 B HACL1 26061 NM_025295 + 21 30470108 26363 Btd 0 ctgccaacaaaaataacagggag gtcctatgcgaagcaggtaagaa 4 5 15 1.1.1.4.15.5 BCBC-5A-0 14094133 P201094 Elovl5 ProximalPromoter P201094 ProximalPromoter Unique Tile chr9:77701763-77702826 (+) NM_134255 + 225 77703051 68801 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) MGI:1916051 Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018; Mm.19130; Mm.427018 9 9 E1 ELOVL5 60481 0 gagctgaaacagggatcaaacat tagccacagtgaagttctggatg 4 5 16 1.1.1.4.16.5 BCBC-5A-0 14094152 P200397 Zfhx1b ProximalPromoter P200397 ProximalPromoter Unique Tile chr2:44932089-44933023 (-) NM_015753;NM_001033635; - 2936 44935025 24136 Zfhx1b 9130203F04Rik|SIP1|Zfx1b|Zfxh1b|mKIAA0569 zinc finger homeobox 1b MGI:1344407 Mm.259595 2 2 C1 ZFHX1B 9839 2 aaagtttcgaagccaaaaaggac ctgcttcattgataagagcggat 4 5 17 1.1.1.4.17.5 BCBC-5A-0 14094171 P209505 Acot2 ProximalPromoter P209505 ProximalPromoter Unique Tile chr12:84876411-84877442 (+) NM_134188 + 195 84877637 171210 Acot2 AA571646|MTE-I|Mte1 acyl-CoA thioesterase 2 MGI:2159605 Mm.371675 12 12 D3 ACOT2 10965 NM_012006 + 21803 84899245 26897 Acot1 0 gctagcggaggaaaaggtgtatt gcactgtttttcaggtgctcttt 4 5 18 1.1.1.4.18.5 BCBC-5A-0 14094190 P207632 Krtap3-2 ProximalPromoter P207632 ProximalPromoter Unique Tile chr11:99372980-99373964 (-) NM_025720 - 37 99372943 66708 Krtap3-2 2310020D06Rik|4733401L16Rik|KAP3.2|KRTAP3.2 keratin associated protein 3-2 MGI:1913958 Mm.46389 11 11 D KRTAP3-2 83897 NM_025524 - 65 99372915 66380 Krtap3-3 0 tcagcctacaggaaacacaaaca cctcagtgggtatgagtccaatc 4 5 19 1.1.1.4.19.5 BCBC-5A-0 14093849 P100030 Arbp ProximalPromoter P100030 ProximalPromoter Unique Tile chr5:115818876-115819934 (+) NM_007475 + 577 115820511 11837 Arbp 36B4|MGC107165|MGC107166 acidic ribosomal phosphoprotein P0 MGI:88066 Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286; Mm.371545; Mm.5286 5 5 F NM_133915;NM_011223; + 13535 115805341 19303 Pxn 0 ctgatcttcaaaggcaccagg ttctcaaggtcccacacgact 4 6 1 1.1.1.4.1.6 BCBC-5A-0 14093868 P101152 Serinc3 ProximalPromoter P101152 ProximalPromoter Unique Tile chr2:163336819-163337891 (-) NM_012032 - 247 163336572 26943 Serinc3 AA959945|AA960047|AIGP1|DIFF33|TMS-1|Tde1 serine incorporator 3 MGI:1349457 Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448; Mm.218473; Mm.392448 2 2 H3 SERINC3 10955 NM_001039390;NM_001039391;NM_011106; + 11973 163349864 18769 Pkig 0 aactcagaaatcctcctgccc gactgttaagtcgtggctggg 4 6 2 1.1.1.4.2.6 BCBC-5A-0 14093887 P101992 Rnf141 ProximalPromoter P101992 ProximalPromoter Unique Tile chr7:110628703-110629602 (-) NM_025999 - 6851 110635554 67150 Rnf141 2610110L04Rik|AA792898|AU022812|ZFP36|ZNF230 ring finger protein 141 MGI:1914400 Mm.96867 7 7 F2 RNF141 50862 NM_053247 - 24532 110654134 114332 Xlkd1 0 tgaaggtcagaggcagctttc ctcctgtggcttgctcactct 4 6 3 1.1.1.4.3.6 BCBC-5A-0 14093906 P102753 Col18a1 ProximalPromoter P102753 ProximalPromoter Unique Tile chr10:76610678-76611756 (-) NM_009929 - 461 76610217 12822 Col18a1 endostatin procollagen, type XVIII, alpha 1 MGI:88451 Mm.4352 10 10 41.3 cM COL18A1 80781 0 cacagacagcacatggacctatc gaccacgaccacttcttatgtcc 4 6 4 1.1.1.4.4.6 BCBC-5A-0 14093925 P103875 Rer1 ProximalPromoter P103875 ProximalPromoter Unique Tile chr4:153930370-153931378 (-) NM_026395 - 273 153930097 67830 Rer1 1110060F11Rik|5830454N22Rik|AU043380 RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae) MGI:1915080 Mm.241604 4 4 E2 RER1 11079 NM_001042407 + 19541 153910829 230983 Pex10 0 gcttggtacaagactgactgcct cagctttatggttgctagggaaa 4 6 5 1.1.1.4.5.6 BCBC-5A-0 14093944 P104433 RP23-136K12.4 DistalPromoter P104433 DistalPromoter Unique Tile chr11:75444483-75446329 (+) NM_008916 + 885 75447214 19062 RP23-136K12.4 C62|Pps putative phosphatase MGI:1194899 Mm.1458 11 11 B5|11 44.12 cM SKIP 51763 NM_008659 + 21443 75467772 17913 Myo1c 0 gcttccattacatttccagggtc gaacccacaaaagctccactacc 4 6 6 1.1.1.4.6.6 BCBC-5A-0 14093963 P104889 Nubp1 DistalPromoter P104889 DistalPromoter Unique Tile chr16:10322149-10324153 (+) NM_011955 + 1374 10325527 26425 Nubp1 - nucleotide binding protein 1 MGI:1347073 Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732 16 16 A1|16 3.4 cM NUBP1 4682 NM_001013778 - 36775 10360928 383103 LOC383103 0 aggctggcttcaaactcataagg cacctgccaaaatgaaaacaaag 4 6 7 1.1.1.4.7.6 BCBC-5A-0 14093982 P105435 2400001E08Rik DistalPromoter P105435 DistalPromoter Unique Tile chr7:101776763-101778615 (+) NM_025605 + 1134 101779749 66508 2400001E08Rik MGC102412|MGC144253|MGC144254 RIKEN cDNA 2400001E08 gene MGI:1913758 Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278; Mm.214841; Mm.30003; Mm.359278 7 7 F1 C11orf59 55004 NM_027532 + 6515 101770248 75430 3200002M19Rik 2 tttggcagatggcttagtggtta gctcttctggaggtcctgagttc 4 6 8 1.1.1.4.8.6 BCBC-5A-0 14094001 P105641 3110023E09Rik DistalPromoter P105641 DistalPromoter Unique Tile chr7:141392341-141394188 (-) NM_026522 - 1205 141391136 68038 3110023E09Rik AI841869 RIKEN cDNA 3110023E09 gene MGI:1915288 Mm.245355 7 7 F5 NM_007459 + 19369 141413557 11772 Ap2a2 0 gatcccattggtaacagaaagcc caccctactaggaacaaatgccc 4 6 9 1.1.1.4.9.6 BCBC-5A-0 14094020 P203400 Rnf130 ProximalPromoter P203400 ProximalPromoter Unique Tile chr11:49867999-49868930 (+) NM_021540 + 160 49868770 59044 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 MGI:1891717 Mm.359004 11 11 B1.2 RNF130 55819 0 agaggaccataccaacctgatga gtgtagtactcctggctcgcgt 4 6 10 1.1.1.4.10.6 BCBC-5A-0 14094039 P202313 Myh9 ProximalPromoter P202313 ProximalPromoter Unique Tile chr15:77669516-77670511 (-) NM_022410;NM_181327; - 156 77669360 17886 Myh9 C80049|D0Jmb2|E030044M24Rik|Myhn-1|Myhn1|NMHC II-A|TU-72.6 myosin, heavy polypeptide 9, non-muscle MGI:107717 Mm.29677 15 15 E1|15 43.3 cM MYH9 4627 0 tctttgctgtaatgtgggtagca ggagtctggcctaaactgacaga 4 6 11 1.1.1.4.11.6 BCBC-5A-0 14094058 P202487 C330018K18Rik ProximalPromoter P202487 ProximalPromoter Unique Tile chr9:95927584-95928507 (+) NM_177352 + 273 95928780 235533 C330018K18Rik AV095337|G630067D24Rik RIKEN cDNA C330018K18 gene MGI:2443336 Mm.213651 9 9 E3.3 MGC40579 256356 0 tgcctattcacgacaagagcata cagcgaccgttactttgaaactt 4 6 12 1.1.1.4.12.6 BCBC-5A-0 14094077 P203228 Riok2 ProximalPromoter P203228 ProximalPromoter Unique Tile chr17:17078223-17079321 (+) NM_025934 + 113 17079208 67045 Riok2 2010110K24Rik RIO kinase 2 (yeast) MGI:1914295 Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633 17 17 A3.1 RIOK2 55781 NM_025681 + 27968 17107289 66643 Lix1 0 agtggagtatggaaggaacacga cgaatggataagcaagaaaggtg 4 6 13 1.1.1.4.13.6 BCBC-5A-0 14094096 P204765 Pak3 ProximalPromoter P204765 ProximalPromoter Unique Tile chrX:138763590-138764638 (+) NM_008778 + 44998 138809636 18481 Pak3 Pak65alpha|Pak65beta|Stk4|mPAK-3 p21 (CDKN1A)-activated kinase 3 MGI:1339656 Mm.40035 X X F2 PAK3 5063 0 ttctgttctgcaactccatttca ctgcacctgtcactagaatccct 4 6 14 1.1.1.4.14.6 BCBC-5A-0 14094115 P206886 Sphk2 ProximalPromoter P206886 ProximalPromoter Unique Tile chr7:45584944-45585854 (-) NM_020011;NM_203280; - 135 45585079 56632 Sphk2 C76851|MGC102297 sphingosine kinase 2 MGI:1861380 Mm.24222 7 7 B3 SPHK2 56848 NM_009077 + 258 45586112 19899 Rpl18 0 agaatcagagacatgatcggagc cactttcagggaagacaccctaa 4 6 15 1.1.1.4.15.6 BCBC-5A-0 14094134 P201118 ProximalPromoter P201118 ProximalPromoter Unique Tile chr2:71960366-71961377 (+) 0 aaaatgtcttcgtattgtggcgt acttctctcatccttggagcctt 4 6 16 1.1.1.4.16.6 BCBC-5A-0 14094153 P200421 Tbcc ProximalPromoter P200421 ProximalPromoter Unique Tile chr17:46352765-46353621 (+) NM_178385 + 190 46353811 72726 Tbcc 2810055C19Rik|MGC103238 tubulin-specific chaperone c MGI:1919976 Mm.33780 17 17 C TBCC 6903 NM_008938 + 20054 46373675 19133 Rds 0 ctggactttaggctaggctcgtt ttttcttcttaaaggggcaggac 4 6 17 1.1.1.4.17.6 BCBC-5A-0 14094172 P209621 Sh3bgrl3 ProximalPromoter P209621 ProximalPromoter Unique Tile chr4:133406414-133407402 (-) NM_080559 - 5585 133400829 73723 Sh3bgrl3 1110004L05Rik|AU022188 SH3 domain binding glutamic acid-rich protein-like 3 MGI:1920973 Mm.22240 4 4 D3 SH3BGRL3 83442 NM_026257 + 31723 133374691 67586 Ubxd5 1 aaagtgtagtgaggtgtggggaa atcttcttaatactgcgcccctc 4 6 18 1.1.1.4.18.6 BCBC-5A-0 14094191 P207656 4933439F11Rik ProximalPromoter P207656 ProximalPromoter Unique Tile chr11:102700372-102701282 (+) NM_025766 + 24 102701258 66784 4933439F11Rik MGC151146|MGC151148 RIKEN cDNA 4933439F11 gene MGI:1914034 Mm.357763 11 11 D NM_028492 + 3039 102697333 73293 Ccdc103 0 gtccattgataggactgtttgcc agctcaagtacaagatgccgttc 4 6 19 1.1.1.4.19.6 BCBC-5A-0 14093850 P100054 Bckdha ProximalPromoter P100054 ProximalPromoter Unique Tile chr7:25367550-25368504 (-) NM_007533 - 52 25367498 12039 Bckdha - branched chain ketoacid dehydrogenase E1, alpha polypeptide MGI:107701 Mm.25848 7 - BCKDHA 593 NM_138586 + 373 25367923 27998 Exosc5 0 gatgccctcttctggtgtgtc cccaccagatgccttattcaa 4 7 1 1.1.1.4.1.7 BCBC-5A-0 14093869 P101176 Lilrb4 ProximalPromoter P101176 ProximalPromoter Duplication Tile chr10:51178325-51179338 (+) NM_013532 + 51 51179389 14728 Lilrb4 CD85K|Gp49b|HM18|ILT3|LIR-5|gp49 leukocyte immunoglobulin-like receptor, subfamily B, member 4 MGI:102701 Mm.34408 10 10 B4|10 32.0 cM NM_008147 + 9232 51169093 14727 Gp49a 0 ggcatctttagggtccacaca aggtccttcctgtcatgggtt 4 7 2 1.1.1.4.2.7 BCBC-5A-0 14093888 P101926 Tbc1d15 ProximalPromoter P101926 ProximalPromoter Unique Tile chr10:114656101-114657159 (-) NM_025706 - 526 114655575 66687 Tbc1d15 4432405K22Rik|AU022358|AU023730|AW557774 TBC1 domain family, member 15 MGI:1913937 Mm.22252 10 10 D2 TBC1D15 64786 0 ggtgtccgctattgtcctgag cacccaagcatctgcatgtaa 4 7 3 1.1.1.4.3.7 BCBC-5A-0 14093907 P102777 Cyp2d9 ProximalPromoter P102777 ProximalPromoter Unique Tile chr15:82279037-82280037 (+) NM_010006 + 121 82280158 13105 Cyp2d9 Cyp2d|P450-2D cytochrome P450, family 2, subfamily d, polypeptide 9 MGI:88606 Mm.378904 15 15 E1|15 47.2 cM NM_010005 - 44091 82234946 13101 Cyp2d10 0 gtgtctccattcaactcaagcct gccagtgatgttcagttcctacc 4 7 4 1.1.1.4.4.7 BCBC-5A-0 14093926 P103899 Dcakd ProximalPromoter P103899 ProximalPromoter Unique Tile chr11:102833411-102834390 (-) NM_026551 - 174 102833237 68087 Dcakd 3010024O21Rik|6720485C15Rik|AI849483|FLJ22955 dephospho-CoA kinase domain containing MGI:1915337 Mm.277449 11 11 E1 DCAKD 79877 NM_008707 + 10258 102844648 18107 Nmt1 1 tagactgcgttactgcaaatgga tttttcgagacagggtttctctg 4 7 5 1.1.1.4.5.7 BCBC-5A-0 14093945 P104457 Rdx DistalPromoter P104457 DistalPromoter Unique Tile chr9:51797336-51799281 (+) NM_009041 + 1350 51800631 19684 Rdx AA516625 radixin MGI:97887 Mm.245746 9 9 A5.3 RDX 5962 NM_001001500 + 26962 51826243 414109 9830163H01Rik 0 ggggaagactctgatggagacat taaagtcggaagtcggtggtaca 4 7 6 1.1.1.4.6.7 BCBC-5A-0 14093964 P105003 Stra13 DistalPromoter P105003 DistalPromoter Unique Tile chr11:120530942-120533132 (-) NM_016665 - 1120 120529822 20892 Stra13 - stimulated by retinoic acid 13 MGI:894324 Mm.259716 11 11 E2 NM_153545 + 880 120530062 217366 Lrrc45 0 tcatgttatctgctgggctcaat tctgatgtcactgagtagcagcg 4 7 7 1.1.1.4.7.7 BCBC-5A-0 14093983 P105459 1300002A08Rik DistalPromoter P105459 DistalPromoter Unique Tile chr8:89510459-89512672 (+) NM_025827 + 1539 89514211 66887 1300002A08Rik AU015403|Lonp RIKEN cDNA 1300002A08 gene MGI:1914137 Mm.324550 8 8 C3 LONPL 83752 0 acctgggaatcatggaaatgtct tgtacccgactatgcaagctgtt 4 7 8 1.1.1.4.8.7 BCBC-5A-0 14094002 P106373 2310040A13Rik DistalPromoter P106373 DistalPromoter Unique Tile chr12:111182621-111184819 (+) NM_027149 + 936 111185755 69641 2310040A13Rik 4930421J07Rik|AI549910|WDR20 RIKEN cDNA 2310040A13 gene MGI:1916891 Mm.399141; Mm.430749; Mm.399141; Mm.430749; Mm.399141; Mm.430749; Mm.399141; Mm.430749; Mm.399141; Mm.430749; Mm.399141; Mm.430749; Mm.399141; Mm.430749; Mm.399141; Mm.430749; Mm.399141; Mm.430749; Mm.399141; Mm.430749 12 12 F1 NM_010480 - 38419 111144202 15519 Hsp90aa1 0 aagtgctgggattaaaggctcag tctgtagagcgagcccagtacac 4 7 9 1.1.1.4.9.7 BCBC-5A-0 14094021 P203426 B230342M21Rik ProximalPromoter P203426 ProximalPromoter Unique Tile chr5:150845575-150846641 (-) NM_133898 - 205 150845370 100637 B230342M21Rik AI428195 RIKEN cDNA B230342M21 gene MGI:2140872 Mm.279932 5 5 G3 0 ctaccaaggacagtcaggttgct gctctgatctctgtaaggaccca 4 7 10 1.1.1.4.10.7 BCBC-5A-0 14094040 P202247 ProximalPromoter P202247 ProximalPromoter Unique Tile chr5:54637271-54638285 (+) 1 cttgctcaaggtcacagagtgaa attaagagttgcctcccttccag 4 7 11 1.1.1.4.11.7 BCBC-5A-0 14094059 P202511 4922504M18Rik ProximalPromoter P202511 ProximalPromoter Unique Tile chr7:104024275-104025221 (-) NM_198624 - 33 104024308 244179 4922504M18Rik Gm490 RIKEN cDNA 4922504M18 gene MGI:2685336 Mm.189668 7 7 E3 MGC20470 143630 NM_198623 - 7182 104017093 244178 Ubqln3 0 gggacaaggcctcactatgtatg ttattcgatgttgatccctcacc 4 7 12 1.1.1.4.12.7 BCBC-5A-0 14094078 P203252 ProximalPromoter P203252 ProximalPromoter Unique Tile chr2:166273265-166274237 (-) 0 aagatgaagggcatcagtctctg tgtagccaaaactcctagccttg 4 7 13 1.1.1.4.13.7 BCBC-5A-0 14094097 P204790 Pik3r2 ProximalPromoter P204790 ProximalPromoter Unique Tile chr8:73705905-73706953 (-) NM_008841 - 225 73705680 18709 Pik3r2 - phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta) MGI:1098772 Mm.12945 8 8 B3.3|8 33.5 cM PIK3R2 5296 NM_023065 - 10267 73695638 65972 Ifi30 0 ctagggcaatagggcaaaatctc aaacactagaaagcggaagggtc 4 7 14 1.1.1.4.14.7 BCBC-5A-0 14094116 P206316 Hsd3b6 ProximalPromoter P206316 ProximalPromoter Unique Tile chr3:98943571-98944507 (-) NM_013821 - 73 98943498 15497 Hsd3b6 D19210 hydroxysteroid dehydrogenase-6, delta<5>-3-beta MGI:109598 Mm.14435 3 3 F2.2 HSD3B1 3283 NM_008293 - 42748 98987255 15492 Hsd3b1 0 ttaggtattgtggggtttgatgc tgggccttctcacatcagttaat 4 7 15 1.1.1.4.15.7 BCBC-5A-0 14094135 P201142 Ankrd52 ProximalPromoter P201142 ProximalPromoter Unique Tile chr10:127779236-127780231 (+) NM_172790 + 110 127780121 237615 Ankrd52 6430544C07|G431002C21Rik ankyrin repeat domain 52 MGI:2444029 Mm.214459 10 10 D3 ANKRD52 283373 NM_028092;NM_028051; - 23184 127803415 72002 Slc39a5 1 tacacaatcctcctgcttcaggt gaagaggaagtggggaagggt 4 7 16 1.1.1.4.16.7 BCBC-5A-0 14094154 P200445 Cort ProximalPromoter P200445 ProximalPromoter Unique Tile chr4:147970499-147971410 (-) NM_007745 - 42 147970541 12854 Cort CST|PCST cortistatin MGI:109538 Mm.6204 4 4 E2|4 81.0 cM CORT 1325 NM_027263 - 9940 147981350 69928 2610040C18Rik 0 gagtgtgggtcagaggtcaagtt ttttaagctctagcaccacctgc 4 7 17 1.1.1.4.17.7 BCBC-5A-0 14094173 P209646 Mtss1 ProximalPromoter P209646 ProximalPromoter Unique Tile chr15:58912025-58913032 (-) NM_144800 - 47 58912072 211401 Mtss1 2310003N14Rik|BC024131|D130001D01Rik|MGC37896|Mim|mKIAA0429 metastasis suppressor 1 MGI:2384818 Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414; Mm.215481; Mm.394414 15 15 D1 MTSS1 9788 1 tcttgcaaacggttcaattaggt aaagagagaacgaaaaagggcag 4 7 18 1.1.1.4.18.7 BCBC-5A-0 14094192 P207590 2510027J23Rik; Rwdd3 ProximalPromoter P207590 ProximalPromoter Unique Tile chr3:121163933-121164846 (-) NM_028456;NM_025637; - 216 121163717 66568; 73170 2510027J23Rik; Rwdd3 -; 3110037C01Rik|AI035684|AI662458|X2CR1 RIKEN cDNA 2510027J23 gene; RWD domain containing 3 MGI:1913818; MGI:1920420 Mm.263163 3 3 G1 ; RWDD3 ; 25950 0 cctttctcttcttggaagccaat tacaagaacaaccaggctgtgaa 4 7 19 1.1.1.4.19.7 BCBC-5A-0 14093851 P100078 Ctnnd1 ProximalPromoter P100078 ProximalPromoter Unique Tile chr2:84451600-84452671 (-) NM_007615 - 86 84451514 12388 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 MGI:105100 Mm.35738 2 2 D|2 47.8 cM CTNND1 1500 NM_001037279;NM_001033166; - 18869 84471540 72657 2700094K13Rik 0 tgcactcatgcacacacaaag cctaagtgatgtcagcccctg 4 8 1 1.1.1.4.1.8 BCBC-5A-0 14093870 P101200 Ppp1cc ProximalPromoter P101200 ProximalPromoter Unique Tile chr5:122417967-122418964 (+) NM_013636 + 8 122418956 19047 Ppp1cc PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform MGI:104872 Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120; Mm.280784; Mm.334198; Mm.395120 5 5 F-G1 PPP1CC 5501 NM_183307 - 19288 122398679 330188 Ccdc63 0 caaggaagctagaggcaagca ccacgagaagaacaagatggc 4 8 2 1.1.1.4.2.8 BCBC-5A-0 14093889 P101950 Pccb ProximalPromoter P101950 ProximalPromoter Unique Tile chr9:100844332-100845390 (-) NM_025835 - 105 100844227 66904 Pccb 1300012P06Rik|AI314687|R74805 propionyl Coenzyme A carboxylase, beta polypeptide MGI:1914154 Mm.335385 9 9 E4 PCCB 5096 2 tagaactgaccttggctccca cagtcacaggcttgcattcag 4 8 3 1.1.1.4.3.8 BCBC-5A-0 14093908 P103083 Tes ProximalPromoter P103083 ProximalPromoter Unique Tile chr6:17035372-17036305 (+) NM_011570;NM_207176; + 21079 17015226 21753 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript MGI:105081 Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719; Mm.230654; Mm.430719 6 6 A2|6 1.5 cM TES 26136 0 gagggaaatagcctgcttcctaa caagaacttgtcagagagtgcga 4 8 4 1.1.1.4.4.8 BCBC-5A-0 14093927 P103923 Nudt4 ProximalPromoter P103923 ProximalPromoter Unique Tile chr10:94994129-94995149 (-) NM_027722 - 295 94993834 71207 Nudt4 4933436C10Rik|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 MGI:1918457 Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041; Mm.24397; Mm.427041 10 10 C3 NM_080560 + 49257 94944872 93765 Ube2n 0 ggtctgaccggttttgtaagatg gttctccgttttagaggtccgat 4 8 5 1.1.1.4.5.8 BCBC-5A-0 14093946 P104481 Scd2 DistalPromoter P104481 DistalPromoter Unique Tile chr19:44343814-44345765 (+) NM_009128 + 1633 44347398 20250 Scd2 Scd-2 stearoyl-Coenzyme A desaturase 2 MGI:98240 Mm.193096 19 19 C3|19 43.0 cM SCD 6319 NM_183216 + 40871 44386636 329065 Scd4 1 tcttactgagttcccacatccca catctctgtgttcaatggggaag 4 8 6 1.1.1.4.6.8 BCBC-5A-0 14093965 P105027 Plrg1 DistalPromoter P105027 DistalPromoter Unique Tile chr3:83139131-83141161 (+) NM_016784 + 303 83141464 53317 Plrg1 AA958940|C80566 pleiotropic regulator 1, PRL1 homolog (Arabidopsis) MGI:1858197 Mm.286349 3 3 E3 PLRG1 5356 NM_181849 - 3414 83135717 110135 Fgb 0 gacagcttcctttgttgatccct cttggtgctccttacttggaggt 4 8 7 1.1.1.4.7.8 BCBC-5A-0 14093984 P105393 1110001A07Rik DistalPromoter P105393 DistalPromoter Unique Tile chr11:86922803-86924764 (+) NM_025377 + 661 86925425 66140 1110001A07Rik C78640|MGC151378 RIKEN cDNA 1110001A07 gene MGI:1913390 Mm.45008 11 11 C FAM33A 348235 NM_175563 - 120 86924884 270906 Prr11 0 actgggatttgaagcagaaggac gttcttatggaggtggggtcttg 4 8 8 1.1.1.4.8.8 BCBC-5A-0 14094003 P106395 Ndufs7 DistalPromoter P106395 DistalPromoter Unique Tile chr10:79648995-79651133 (+) NM_029272 + 1447 79652580 75406 Ndufs7 1010001M04Rik NADH dehydrogenase (ubiquinone) Fe-S protein 7 MGI:1922656 Mm.28712 10 10 C1|10 43.0 cM NDUFS7 374291 NM_010255 - 12950 79664083 14431 Gamt 0 taactcgtgtctcactggaagcc acatttgcatgagcacacacact 4 8 9 1.1.1.4.9.8 BCBC-5A-0 14094022 P203451 Lrrc46 ProximalPromoter P203451 ProximalPromoter Unique Tile chr11:96857243-96858162 (-) NM_027026 - 216 96857459 69297 Lrrc46 1700006D24Rik leucine rich repeat containing 46 MGI:1916547 Mm.250465 11 11 D LRRC46 90506 NM_026154 + 432 96857675 107732 Mrpl10 0 agacgagacacgtgcataaacaa gagcagagaagcttagacggttg 4 8 10 1.1.1.4.10.8 BCBC-5A-0 14094041 P202271 Sfrs12 ProximalPromoter P202271 ProximalPromoter Unique Tile chr13:104895098-104896107 (-) NM_172592 - 10134 104884964 218543 Sfrs12 8430401B01|AI450757|AI462342|SRrp508|SRrp86 splicing factor, arginine/serine-rich 12 MGI:2145245 Mm.33908 13 13 D1 SFRS12 140890 0 catagctgtagccatttcgttcc ttgctaggcgtcactaggtcttc 4 8 11 1.1.1.4.11.8 BCBC-5A-0 14094060 P203888 H13 ProximalPromoter P203888 ProximalPromoter Unique Tile chr2:152359719-152360773 (+) NM_010376 + 129 152360902 14950 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|PSL3|Spp histocompatibility 13 MGI:95886 Mm.277327 2 2 G3|2 86.0 cM HM13 81502 NM_025543 + 17815 152378588 66405 Mcts2 0 gatttgggcatttaagagcattg ctggaccactatggctgtaatcc 4 8 12 1.1.1.4.12.8 BCBC-5A-0 14094079 P203277 4632423N09Rik ProximalPromoter P203277 ProximalPromoter Unique Tile chr11:97900442-97901480 (-) NM_134030 - 185 97900257 103861 4632423N09Rik AI849362 RIKEN cDNA 4632423N09 gene MGI:2144301 Mm.386834 11 11 D NM_146028 - 30890 97869552 217154 Stac2 0 cagcctttctggaggtgaaagta ctgtctcctgtctcctgtggttt 4 8 13 1.1.1.4.13.8 BCBC-5A-0 14094098 P204814 Ppfibp2 ProximalPromoter P204814 ProximalPromoter Unique Tile chr7:107385216-107386128 (+) NM_008905 + 314 107386442 19024 Ppfibp2 Cclp1|MGC117695 protein tyrosine phosphatase, receptor-type, F interacting protein, binding protein 2 MGI:894649 Mm.2817 7 7 F2 PPFIBP2 8495 NM_172907 + 26594 107358622 244198 Olfml1 0 agcctctcacccgctattttaag cttgcacctaggactcttgcact 4 8 14 1.1.1.4.14.8 BCBC-5A-0 14094117 P206340 Hspb7 ProximalPromoter P206340 ProximalPromoter Unique Tile chr4:140692890-140693943 (+) NM_013868 + 164 140693779 29818 Hspb7 27kDa|Hsp25-2|MGC107591|cvHsp heat shock protein family, member 7 (cardiovascular) MGI:1352494 Mm.46181 4 4 E1 HSPB7 27129 NM_019701 - 4800 140688090 56365 Clcnkb 0 cctaggaggctgtatttcctggt gaagaagaagaggaggaggagga 4 8 15 1.1.1.4.15.8 BCBC-5A-0 14094136 P201076 B230120H23Rik ProximalPromoter P201076 ProximalPromoter Unique Tile chr2:72043339-72044393 (+) NM_023057;NM_178084; + 42211 72086604 65964 B230120H23Rik AV006891|MLTK|MLTKalpha|MLTKbeta|Zak RIKEN cDNA B230120H23 gene MGI:2443258 Mm.314618 2 2 C3 ZAK 51776 0 ccatgattttgaagcttttggag gatttggagaaactgtggcattc 4 8 16 1.1.1.4.16.8 BCBC-5A-0 14094155 P200470 5730405I09Rik ProximalPromoter P200470 ProximalPromoter Unique Tile chr18:9450356-9451392 (-) NM_026484 - 208 9450148 67974 5730405I09Rik 1700025H17Rik|3110050L10Rik|4631402G10Rik RIKEN cDNA 5730405I09 gene MGI:1915224 Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523; Mm.376607; Mm.86523 18 18 A1 C10orf9 219771 0 gtgtgtgcagttgataggcaaag gaatatagatagtggctccggca 4 8 17 1.1.1.4.17.8 BCBC-5A-0 14094174 P209670 Ube2e2 ProximalPromoter P209670 ProximalPromoter Unique Tile chr14:17686990-17687977 (-) NM_144839 - 237 17686753 218793 Ube2e2 BC016265|MGC28917 ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) MGI:2384997 Mm.23551 14 14 A2 UBE2E2 7325 0 tggggtctttttgcactagttgt taaagtgacagctgagtcctggg 4 8 18 1.1.1.4.18.8 BCBC-5A-0 14094193 P207614 3300001M20Rik ProximalPromoter P207614 ProximalPromoter Unique Tile chr2:132518505-132519436 (+) NM_175113 - 11009 132507496 66926 3300001M20Rik AU016412|AW492787|CGI-09|mKIAA1153 RIKEN cDNA 3300001M20 gene MGI:1914176 Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784; Mm.34199; Mm.427784 2 2 F2 CGI-09 51605 NM_025676 + 10730 132507775 66634 Mcm8 0 tctctatgccctttctcaacagc tgttgctaacagaatttgcctca 4 8 19 1.1.1.4.19.8 BCBC-5A-0 14093852 P100384 Ntn1 ProximalPromoter P100384 ProximalPromoter Unique Tile chr11:68202634-68203672 (-) NM_008744 - 319 68202315 18208 Ntn1 AI561871|BC019633|Netrin-1 netrin 1 MGI:105088 Mm.39095 11 11 B3 NTN1 9423 NM_177320 + 44647 68248319 320207 Pik3r5 1 cctagagcctaggggcagaaa cagctatgcccattctccttg 4 9 1 1.1.1.4.1.9 BCBC-5A-0 14093871 P101224 Sgk2 ProximalPromoter P101224 ProximalPromoter Unique Tile chr2:162677355-162678350 (+) NM_013731 + 636 162678986 27219 Sgk2 AI098171|AW146006|Sgkl serum/glucocorticoid regulated kinase 2 MGI:1351318 Mm.26462 2 2 H3 SGK2 10110 NM_172150 + 30562 162708912 245866 Ift52 0 ccactagggcacagaccaaag actgagctgctgcctaaccac 4 9 2 1.1.1.4.2.9 BCBC-5A-0 14093890 P101974 Itpa ProximalPromoter P101974 ProximalPromoter Unique Tile chr2:130358344-130359244 (+) NM_025922 + 37 130359281 16434 Itpa 2010016I08Rik|AU020102|Itp inosine triphosphatase (nucleoside triphosphate pyrophosphatase) MGI:96622 Mm.21399; Mm.27090; Mm.96211; Mm.21399; Mm.27090; Mm.96211; Mm.21399; Mm.27090; Mm.96211; Mm.21399; Mm.27090; Mm.96211; Mm.21399; Mm.27090; Mm.96211; Mm.21399; Mm.27090; Mm.96211; Mm.21399; Mm.27090; Mm.96211; Mm.21399; Mm.27090; Mm.96211; Mm.21399; Mm.27090; Mm.96211; Mm.21399; Mm.27090; Mm.96211; Mm.21399; Mm.27090; Mm.96211; Mm.21399; Mm.27090; Mm.96211 2 2 F1|2 73.6 cM ITPA 3704 NM_029832 - 2258 130356086 77006 2600009E05Rik 0 cgaactcagaaatccacctgc gcggaagtaggtagctcggtt 4 9 3 1.1.1.4.3.9 BCBC-5A-0 14093909 P103107 Unc119 ProximalPromoter P103107 ProximalPromoter Unique Tile chr11:78158429-78159462 (+) NM_011676 + 254 78159716 22248 Unc119 HRG4|Unc119h unc-119 homolog (C. elegans) MGI:1328357 Mm.284811 11 11 B5 UNC119 9094 NM_201406 + 13813 78144616 276846 Pigs 0 ctcgaacttgaaagcctttgtgt tttccctgatacctttgtcctga 4 9 4 1.1.1.4.4.9 BCBC-5A-0 14093928 P103857 Atg12 ProximalPromoter P103857 ProximalPromoter Unique Tile chr18:46866862-46867885 (-) NM_026217 - 18 46866880 67526 Atg12 4931423H11Rik|A330058M13Rik|Apg12l|Atg12l autophagy-related 12 (yeast) MGI:1914776 Mm.9852 18 18 C ATG12 9140 NM_009681 + 385 46867247 11777 Ap3s1 1 tatggaaacaccctggacagact ctgaatcttccgacatctttgct 4 9 5 1.1.1.4.5.9 BCBC-5A-0 14093947 P104505 Snrpb DistalPromoter P104505 DistalPromoter Unique Tile chr2:129871884-129873705 (-) NM_009225 - 1084 129870800 20638 Snrpb AU018828|SM-B|SM11|SMB|SNRNP-B small nuclear ribonucleoprotein B Mm.88216 2 2 F1|2 73.0 cM NM_138655 + 12929 129886634 192140 Tmc2 0 cattctgattctgacaccttggg ctacccagttccctctgtccatc 4 9 6 1.1.1.4.6.9 BCBC-5A-0 14093966 P105051 Pkd2l2 DistalPromoter P105051 DistalPromoter Unique Tile chr18:34530792-34532940 (+) NM_016927 + 1283 34534223 53871 Pkd2l2 TRPP5 polycystic kidney disease 2-like 2 MGI:1858231 Mm.226899 18 18 C PKD2L2 27039 NM_007874 - 32662 34498130 13476 Reep5 0 gctcagcgcttttgttctaatca gctgcatctcaattccatcactt 4 9 7 1.1.1.4.7.9 BCBC-5A-0 14093985 P105417 MGC30332 DistalPromoter P105417 DistalPromoter Unique Tile chr7:30273401-30275249 (-) NM_145580 + 410 30274839 101883 MGC30332 - hypothetical protein MGC30332 Mm.333757 7 7 B1 NM_170760 + 1302 30272099 233073 U2af1l4 0 agcacacctactccccaaagaag gtcccagaagcttgagtgtttga 4 9 8 1.1.1.4.8.9 BCBC-5A-0 14094004 P000804 Blank P000804 Buffer Control Negative Blank 4 9 9 1.1.1.4.9.9 BCBC-5A-0 14094023 P203475 BC024479 ProximalPromoter P203475 ProximalPromoter Unique Tile chr9:37265987-37266942 (+) NM_146222 + 7 37266949 235184 BC024479 MGC37388 cDNA sequence BC024479 MGI:2384579 Mm.127892 9 9 A4 C11orf61 79684 NM_027102 + 10837 37277779 69524 Esam1 0 caggaactgagccagactgaaat tctttcttttcccaacaccatgt 4 9 10 1.1.1.4.10.9 BCBC-5A-0 14094042 P202295 BC035954 ProximalPromoter P202295 ProximalPromoter Unique Tile chr4:147794034-147795123 (+) NM_177569 + 152 147794971 194162 BC035954 MGC31683 cDNA sequence BC035954 MGI:2673697 Mm.89623 4 4 E2 RP4-734G22.2 163301 0 gctctgagcaggacaaaatgaat agcagacaccgcttagaaacaac 4 9 11 1.1.1.4.11.9 BCBC-5A-0 14094061 P203913 Cd14 ProximalPromoter P203913 ProximalPromoter Unique Tile chr18:36852456-36853537 (-) NM_009841 - 172 36852628 12475 Cd14 - CD14 antigen MGI:88318 Mm.3460 18 18 B2|18 31.0 cM CD14 929 NM_028036 + 7504 36861041 71983 2410015B03Rik 0 acaacaatgatgacgatgacgac gactcaccatggtcggtagattc 4 9 12 1.1.1.4.12.9 BCBC-5A-0 14094080 P203210 F830003B07 ProximalPromoter P203210 ProximalPromoter Unique Tile chr5:108991501-108992507 (-) NM_177874 - 244 108991257 330157 F830003B07 - hypothetical protein F830003B07 Mm.244849 5 5 F NM_026109 - 43158 109035665 67366 1810008K16Rik 0 aaaggatgtggagaaagagggac cactcccacttcatggctctagt 4 9 13 1.1.1.4.13.9 BCBC-5A-0 14094099 P204838 Npepps ProximalPromoter P204838 ProximalPromoter Unique Tile chr11:97096893-97097961 (-) NM_008942 - 227 97096666 19155 Npepps MGC102199|MP100|Psa|R74825|goku aminopeptidase puromycin sensitive MGI:1101358 Mm.29824 11 11 D|11 56.0 cM NPEPPS 9520 NM_025927 + 33984 97131945 67036 Mrpl45 0 aaggcccgtctctttaagaattg ctctgtggaaaatggaagcctac 4 9 14 1.1.1.4.14.9 BCBC-5A-0 14094118 P206365 Col5a1 ProximalPromoter P206365 ProximalPromoter Unique Tile chr2:27707220-27708153 (+) NM_015734 + 540 27708693 12831 Col5a1 - procollagen, type V, alpha 1 MGI:88457 Mm.7281 2 2 A2-B|2 18.0 cM COL5A1 1289 1 taagtcagtactagccaccccca ccaccctgatcctagattcttcc 4 9 15 1.1.1.4.15.9 BCBC-5A-0 14094137 P201100 Oprl1 ProximalPromoter P201100 ProximalPromoter Unique Tile chr2:181643202-181644195 (+) NM_011012 + 254 181644449 18389 Oprl1 KOR3|LC132|MOR-C|ORL1|Oprl|XOR1|morc opioid receptor-like 1 MGI:97440 Mm.285075 2 2 H2-4|2 110.0 cM OPRL1 4987 NM_199023 - 15354 181627848 277496 4930526D03Rik 0 tgtctccttgagtgtccatgtgt aaatgctcacctagaggcagatg 4 9 16 1.1.1.4.16.9 BCBC-5A-0 14094156 P209233 Bcdo2 ProximalPromoter P209233 ProximalPromoter Unique Tile chr9:50307683-50308595 (-) NM_133217 - 4751 50302932 170752 Bcdo2 B-diox-II|MGC129322|MGC129323 beta-carotene 9', 10'-dioxygenase 2 MGI:2177469 Mm.390149 9 9 B BCDO2 83875 NM_025687 - 4903 50313498 66654 Tex12 2 cggtgttttctgatggtcttagg tttagactggcaggcaatagctc 4 9 17 1.1.1.4.17.9 BCBC-5A-0 14094175 P209694 5630401D24Rik ProximalPromoter P209694 ProximalPromoter Unique Tile chr1:164385013-164386090 (-) NM_144877 - 7 164385020 71449 5630401D24Rik - RIKEN cDNA 5630401D24 gene MGI:1918699 Mm.270569 1 1 H1 KIAA0859 51603 NM_016796 + 21412 164407502 53330 Vamp4 0 cctagaacatcttccggtccttt aatcttagccactacaggcacca 4 9 18 1.1.1.4.18.9 BCBC-5A-0 14094194 P207638 ProximalPromoter P207638 ProximalPromoter Unique Tile chrX:81884065-81885108 (+) 0 tctcataaaactgtgctttgcca tttcccaccattacgattttcac 4 9 19 1.1.1.4.19.9 BCBC-5A-0 14093853 P100408 Pitpna ProximalPromoter P100408 ProximalPromoter Unique Tile chr11:75402910-75403994 (+) NM_008850 + 308 75404302 18738 Pitpna Pitpn|vb|vibrator phosphatidylinositol transfer protein, alpha MGI:99887 Mm.3128 11 11 B5|11 44.11 cM PITPNA 5306 NM_007749 - 12249 75416243 12867 Cox7c 2 tctgcttcagttcctgccttc aaccacgaagcacttgcctaa 4 10 1 1.1.1.4.1.10 BCBC-5A-0 14093872 P101158 Rpl8 ProximalPromoter P101158 ProximalPromoter Unique Tile chr15:76730812-76731714 (+) NM_012053 + 160 76731554 26961 Rpl8 - ribosomal protein L8 MGI:1350927 Mm.30066 15 15 E1 RPL8 6132 NM_025536 + 3582 76727230 66398 Commd5 0 tccgcaggtgaccttcttaaa ccctcctacctttacgatgcc 4 10 2 1.1.1.4.2.10 BCBC-5A-0 14093891 P101998 Lass4 ProximalPromoter P101998 ProximalPromoter End Repeat Tile chr8:4491588-4492798 (+) NM_026058 + 705 4493503 67260 Lass4 2900019C14Rik|Trh1 longevity assurance homolog 4 (S. cerevisiae) MGI:1914510 Mm.35511 8 8 A1.2 LASS4 79603 0 aagctgcatccaccagatgat ctgctaggctctgcaaaggaa 4 10 3 1.1.1.4.3.10 BCBC-5A-0 14093910 P103131 Cdc6 ProximalPromoter P103131 ProximalPromoter Unique Tile chr11:98722942-98723963 (+) NM_001025779;NM_011799; + 15 98723978 23834 Cdc6 CDC18L cell division cycle 6 homolog (S. cerevisiae) MGI:1345150 Mm.20912 11 11 D CDC6 990 NM_009024 + 29824 98753787 19401 Rara 2 ccaagacagccagagctacaaat tctacagcagctgcaaagtcaac 4 10 4 1.1.1.4.4.10 BCBC-5A-0 14093929 P103881 Ela3 ProximalPromoter P103881 ProximalPromoter Unique Tile chr4:136702903-136703820 (-) NM_026419 - 307 136702596 67868 Ela3 0910001F22Rik|2310074F01Rik|AI504000|Ela3b elastase 3, pancreatic MGI:1915118 Mm.297477 4 4 D3|4 82.0 cM ELA3B 23436 NM_027063 + 21552 136725372 69380 1700013G24Rik 0 agcaagcctgcttcctcttttat cctggctttgtctattgagtgct 4 10 5 1.1.1.4.5.10 BCBC-5A-0 14093948 P104619 Cebpz DistalPromoter P104619 DistalPromoter Unique Tile chr17:78843732-78845930 (-) NM_001024806 - 1604 78842128 12607 Cebpz AI848081|CBF2|Cbf|Cebpa-rs1|MGC36087 CCAAT/enhancer binding protein zeta MGI:109386 Mm.24169 17 17 E3 CEBPZ 10153 NM_028611;NM_144760; + 1527 78842205 73694 2410091C18Rik 1 gttctgagttcagttcccagcaa agcaagcgatgctcatgtgtaat 4 10 6 1.1.1.4.6.10 BCBC-5A-0 14093967 P105075 Eif3s2 DistalPromoter P105075 DistalPromoter Unique Tile chr4:129103873-129105770 (-) NM_018799 - 958 129102915 54709 Eif3s2 36kDa|D4Ertd632e|Trip1 eukaryotic translation initiation factor 3, subunit 2 (beta) MGI:1860763 Mm.250874 4 4 D2.2|4 61.0 cM EIF3S2 8668 NM_029748 + 863 129103010 76799 2510006D16Rik 2 ctctgagtcctggggttacaggt acttgccctggggtagaacataa 4 10 7 1.1.1.4.7.10 BCBC-5A-0 14093986 P105441 Spcs2 DistalPromoter P105441 DistalPromoter Unique Tile chr7:99724197-99726366 (-) NM_025668 - 8769 99732966 66624 Spcs2 5730406I15Rik|AA408713|MGC60452|mKIAA0102 signal peptidase complex subunit 2 homolog (S. cerevisiae) MGI:1913874 Mm.30043 7 7 E2 SPCS2 9789 NM_016720 - 21697 99702500 50877 Neu3 2 aacaaaaccagcagactcccttc atgtaaccgagcatgtgtgtgtg 4 10 8 1.1.1.4.8.10 BCBC-5A-0 14094005 P000900 Blank P000900 Buffer Control Negative Blank 4 10 9 1.1.1.4.9.10 BCBC-5A-0 14094024 P203407 Pbef1 ProximalPromoter P203407 ProximalPromoter Unique Tile chr12:33404377-33405329 (+) NM_021524 + 252 33405581 59027 Pbef1 1110035O14Rik|AI314458|Nampt|Pbef|Visfatin pre-B-cell colony-enhancing factor 1 MGI:1929865 Mm.202727 12 12 B1 PBEF1 10135 0 ataaaacagcctaaaatggcggt accttcctcttgtcctacccagt 4 10 10 1.1.1.4.10.10 BCBC-5A-0 14094043 P202319 Nostrin ProximalPromoter P202319 ProximalPromoter Unique Tile chr2:68935827-68936732 (+) NM_181547 + 47 68936685 329416 Nostrin Daip2|mDaIP2 nitric oxide synthase trafficker MGI:3606242 Mm.90047 2 2 C2 NOSTRIN 115677 0 catcacctcagggattgacctac tcatgttgaaatgctgtctgctt 4 10 11 1.1.1.4.11.10 BCBC-5A-0 14094062 P203937 Gas1 ProximalPromoter P203937 ProximalPromoter Unique Tile chr13:60187092-60188079 (-) NM_008086 - 104 60186988 14451 Gas1 AW554192|Gas-1 growth arrest specific 1 MGI:95655 Mm.22701 13 13 B3-C2|13 37.0 cM GAS1 2619 NM_177810 + 27014 60215093 328264 A030007L22 0 atgctaagatttgtcattgccgt caaaaacattagcaacgctcctc 4 10 12 1.1.1.4.12.10 BCBC-5A-0 14094081 P203234 Lactb2 ProximalPromoter P203234 ProximalPromoter Unique Tile chr1:13645963-13646982 (-) NM_145381 - 240 13645723 212442 Lactb2 Cgi-83|E430032H21Rik|MGC7674 lactamase, beta 2 MGI:2442551 Mm.393974; Mm.89572; Mm.393974; Mm.89572; Mm.393974; Mm.89572; Mm.393974; Mm.89572; Mm.393974; Mm.89572 1 1 A3 LACTB2 51110 NM_001011873 + 7002 13653984 381246 Xkr9 0 ggcagagaaaattggaaaagaca tctgagccttgtttccaagtagc 4 10 13 1.1.1.4.13.10 BCBC-5A-0 14094100 P204856 Ptprn ProximalPromoter P204856 ProximalPromoter Unique Tile chr1:75147452-75148366 (-) NM_008985 - 152 75147300 19275 Ptprn IA-2|KIAA4064|mIA-A|mKIAA4064 protein tyrosine phosphatase, receptor type, N MGI:102765 Mm.2902 1 1 C3|1 41.0 cM PTPRN 5798 NM_009049 - 13125 75161491 19711 Resp18 0 tttgatgtggcgtgtaccttatg gctcttatgcctatttgcgtcat 4 10 14 1.1.1.4.14.10 BCBC-5A-0 14094119 P206390 Icosl ProximalPromoter P206390 ProximalPromoter Unique Tile chr10:77471074-77472682 (+) NM_015790 + 186 77472496 50723 Icosl AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|KIAA0653|LICOS|Ly115l|mKIAA0653 icos ligand MGI:1354701 Mm.17819 10 10 C1 ICOSLG 23308 NM_019448 + 17973 77453101 54427 Dnmt3l 2 atgttgatagccaagagccagag aacagcgaacggactcactttag 4 10 15 1.1.1.4.15.10 BCBC-5A-0 14094138 P201124 Nagpa ProximalPromoter P201124 ProximalPromoter Unique Tile chr16:5119533-5120525 (-) NM_013796 - 200 5119333 27426 Nagpa AI596180 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase MGI:1351598 Mm.215641 16 - NAGPA 51172 NM_001033220 - 17076 5137601 239691 AU021092 0 cctttgggtaagccctaagaaga tctgtgttgcacaaaccagaagt 4 10 16 1.1.1.4.16.10 BCBC-5A-0 14094157 P209257 Zfand2a ProximalPromoter P209257 ProximalPromoter Unique Tile chr5:139738085-139739173 (-) NM_133349 - 26 139738059 100494 Zfand2a AA407930|AU016206|Airap zinc finger, AN1-type domain 2A MGI:2140729 Mm.24521 5 5 G2 ZFAND2A 90637 NM_028469 - 23916 139714169 73212 3110082I17Rik 0 ttctgggtctattagcctagccc gatccagagtcatacatcctggg 4 10 17 1.1.1.4.17.10 BCBC-5A-0 14094176 P209627 Rab3il1 ProximalPromoter P209627 ProximalPromoter Unique Tile chr19:10084157-10085077 (+) NM_144538 + 195 10085272 74760 Rab3il1 1200014K04Rik|AI115013|C76746|Rab3ail1 RAB3A interacting protein (rabin3)-like 1 MGI:1922010 Mm.281969 19 19 A RAB3IL1 5866 NM_011913 - 19898 10064259 24115 Vmd2 0 tcaaggttctggcagtagaggtc cctatcactttctgccttgcact 4 10 18 1.1.1.4.18.10 BCBC-5A-0 14094195 P207662 9030623N16Rik ProximalPromoter P207662 ProximalPromoter Unique Tile chr2:121989517-121990437 (+) NM_025777 + 84 121990353 66811 9030623N16Rik - RIKEN cDNA 9030623N16 gene MGI:1914061 Mm.171333 2 2 E5 NM_145395 - 14697 122005134 213696 Duoxa1 0 aagaggcccctactacgtacctg gagtgataaaaagtccgagccct 4 10 19 1.1.1.4.19.10 BCBC-5A-0 14093854 P100432 RP23-136K12.4 ProximalPromoter P100432 ProximalPromoter Unique Tile chr11:75446329-75447246 (+) NM_008916 + 32 75447214 19062 RP23-136K12.4 C62|Pps putative phosphatase MGI:1194899 Mm.1458 11 11 B5|11 44.12 cM SKIP 51763 NM_008659 + 20526 75467772 17913 Myo1c 0 cttgaggcatcactgggtagc tccctccggattgtttttctt 4 11 1 1.1.1.4.1.11 BCBC-5A-0 14093873 P101182 Hoxc4 ProximalPromoter P101182 ProximalPromoter Unique Tile chr15:102861257-102862314 (+) NM_013553 + 114 102862428 15423 Hoxc4 Hox-3.5 homeo box C4 MGI:96195 Mm.1351 15 15 F3|15 57.4 cM HOXC4 3221 NM_175730 + 19216 102842041 15424 Hoxc5 0 aaatagtccttccttgcccca tatggcaatcgtgttgcagtc 4 11 2 1.1.1.4.2.11 BCBC-5A-0 14093892 P102315 Gsta1 ProximalPromoter P102315 ProximalPromoter Duplication Tile chr9:78016642-78017568 (+) NM_008181 + 1199 78016369 14857 Gsta1 Gst2-1 glutathione S-transferase, alpha 1 (Ya) MGI:1095417 Mm.197422 9 9 E1|9 43.0 cM NM_010357 + 38927 77977715 14860 Gsta4 0 catccagtacccacctattgctc ttgcacacttctctctgcagttc 4 11 3 1.1.1.4.3.11 BCBC-5A-0 14093911 P103155 Slc26a8 ProximalPromoter P103155 ProximalPromoter Unique Tile chr17:28417584-28418666 (+) NM_146076 - 8 28417576 224661 Slc26a8 MGC38861 solute carrier family 26, member 8 MGI:2385046 Mm.219530 17 17 A3.3|17 13.4 cM SLC26A8 116369 NM_011951 + 264 28418930 26416 Mapk14 0 ttacgggtctaactttccccatt caacctgctcactagagtcgtca 4 11 4 1.1.1.4.4.11 BCBC-5A-0 14093930 P103905 ProximalPromoter P103905 ProximalPromoter Unique Tile chr3:21239286-21240252 (+) 0 aacaaacatcagggctatccaga ctaaggctgggttggtagacaga 4 11 5 1.1.1.4.5.11 BCBC-5A-0 14093949 P104643 Eif3s10 DistalPromoter P104643 DistalPromoter Unique Tile chr19:60831295-60833451 (-) NM_010123 - 14011 60845306 13669 Eif3s10 A830012B05Rik|Csma|Eif3|mKIAA0139 eukaryotic translation initiation factor 3, subunit 10 (theta) MGI:95301 Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824; Mm.2238; Mm.403824 19 19 D EIF3S10 8661 NM_178421 + 20333 60810962 332397 Nanos1 0 agctgcatttagagatggcagtg attaattaggccgattcgtgtgg 4 11 6 1.1.1.4.6.11 BCBC-5A-0 14093968 P105009 Exosc10 DistalPromoter P105009 DistalPromoter Unique Tile chr4:147398961-147401087 (+) NM_016699 + 1161 147402248 50912 Exosc10 PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4 exosome component 10 MGI:1355322 Mm.266635 4 4 E2 EXOSC10 5394 NM_009272 + 34231 147435318 20810 Srm 0 cctcagggctagaactgaaccat ggacgggtgaggtaacaggatag 4 11 7 1.1.1.4.7.11 BCBC-5A-0 14093987 P105465 Chordc1 DistalPromoter P105465 DistalPromoter Unique Tile chr9:18039294-18041345 (+) NM_025844 + 1323 18042668 66917 Chordc1 1110001O09Rik|AA409036|Chp-1 cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 MGI:1914167 Mm.103534; Mm.427563; Mm.103534; Mm.427563; Mm.103534; Mm.427563; Mm.103534; Mm.427563; Mm.103534; Mm.427563; Mm.103534; Mm.427563; Mm.103534; Mm.427563; Mm.103534; Mm.427563; Mm.103534; Mm.427563; Mm.103534; Mm.427563; Mm.103534; Mm.427563 9 9 A3 CHORDC1 26973 0 tgtctgcagaacagcaatggtaa cagtttctggtgagtgatttggg 4 11 8 1.1.1.4.8.11 BCBC-5A-0 14094006 P000996 Blank P000996 Buffer Control Negative Blank 4 11 9 1.1.1.4.9.11 BCBC-5A-0 14094025 P203432 Snrk ProximalPromoter P203432 ProximalPromoter Unique Tile chr9:121964964-121966031 (+) NM_133741 + 5 121966036 20623 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|MGC28970|R74830|mKIAA0096 SNF related kinase MGI:108104 Mm.257989 9 9 F4 SNRK 54861 1 ggaaggaagaagacttgccattt acccagggctaatcataataccg 4 11 10 1.1.1.4.10.11 BCBC-5A-0 14094044 P201848 ProximalPromoter P201848 ProximalPromoter Unique Tile chr13:50555979-50556909 (+) 0 caggcaaattggagactatggac aatgttgtcttccctccctcttc 4 11 11 1.1.1.4.11.11 BCBC-5A-0 14094063 P203961 5730453I16Rik ProximalPromoter P203961 ProximalPromoter Unique Tile chr19:10592047-10593026 (-) NM_172302 + 31 10592995 269061 5730453I16Rik AL022757|C330017N18Rik|MGC46982 RIKEN cDNA 5730453I16 gene MGI:1917826 Mm.293980 19 19 A FLJ12529 79869 NM_025333 - 97 10592144 66072 0610038F07Rik 1 cggagaaccgacaaagtaagaaa cacagaggaggacgaaacagtct 4 11 12 1.1.1.4.12.11 BCBC-5A-0 14094082 P203258 Ttc28 ProximalPromoter P203258 ProximalPromoter Unique Tile chr5:111527215-111528257 (+) NM_024477 + 254 111528511 209683 Ttc28 6030435N04|AI428795|AI851761|BC002262|MGC7623 tetratricopeptide repeat domain 28 MGI:2140873 Mm.295660; Mm.389674; Mm.295660; Mm.389674; Mm.295660; Mm.389674; Mm.295660; Mm.389674; Mm.295660; Mm.389674; Mm.295660; Mm.389674; Mm.295660; Mm.389674; Mm.295660; Mm.389674; Mm.295660; Mm.389674; Mm.295660; Mm.389674 5 5 F TTC28 23331 NM_019640 + 42808 111571065 56305 Pitpnb 1 ctgcactgacgcattacattagc tcactggagtgacaaggagtcag 4 11 13 1.1.1.4.13.11 BCBC-5A-0 14094101 P204881 Rb1 ProximalPromoter P204881 ProximalPromoter Unique Tile chr14:72059630-72060745 (-) NM_009029 - 265 72059895 19645 Rb1 Rb|Rb-1|pRb retinoblastoma 1 MGI:97874 Mm.273862 14 14 D3|14 41.0 cM RB1 5925 1 agtatgctcttttccggtgtctg ctcccttcccttcccttctct 4 11 14 1.1.1.4.14.11 BCBC-5A-0 14094120 P206322 Rax ProximalPromoter P206322 ProximalPromoter Unique Tile chr18:66064314-66065315 (-) NM_013833 - 108 66064422 19434 Rax 7530406A22Rik|E130303K03Rik|Rx|ey-1|ey1 retina and anterior neural fold homeobox MGI:109632 Mm.275824 18 18 E1|18 38.0 cM RAX 30062 NM_145493 - 30155 66095470 225644 Cplx4 2 cttctttctgctgagcctttgag tcggtctgtccaaagctaaactc 4 11 15 1.1.1.4.15.11 BCBC-5A-0 14094139 P201148 Dgkb ProximalPromoter P201148 ProximalPromoter End Repeat Tile chr12:38389745-38390751 (+) NM_178681 + 149 38390602 217480 Dgkb 6430574F24|90kda|C630029D13Rik|DAGK2|DGK|DGK-beta|mKIAA0718 diacylglycerol kinase, beta MGI:2442474 Mm.126525 12 12 A3 DGKB 1607 1 tgtgtgtgtgtgtgtgtgtgtgt aggcttctttccttatgcaaacc 4 11 16 1.1.1.4.16.11 BCBC-5A-0 14094158 P209281 2310061J03Rik ProximalPromoter P209281 ProximalPromoter Unique Tile chr16:55899812-55900886 (-) NM_133677 - 311 55899501 66391 2310061J03Rik - RIKEN cDNA 2310061J03 gene MGI:1913641 Mm.347938 16 16 C1.1 NM_024218 + 8453 55891359 68193 Rpl24 1 agcaaaacacccatacacacaaa tgcgacacagaaacaaggaataa 4 11 17 1.1.1.4.17.11 BCBC-5A-0 14094177 P209652 Slc39a14 ProximalPromoter P209652 ProximalPromoter Unique Tile chr14:69086737-69087689 (-) NM_144808 - 233 69086504 213053 Slc39a14 BC021530|G630015O18Rik|MGC38539|fad123 solute carrier family 39 (zinc transporter), member 14 MGI:2384851 Mm.270647 14 14 D2 SLC39A14 23516 0 accaaaaatcccccttttacctt gctattctctggaaacctcccat 4 11 18 1.1.1.4.18.11 BCBC-5A-0 14094196 P001547 Blank P001547 Buffer Control Negative Blank 4 11 19 1.1.1.4.19.11 BCBC-5A-0 14093855 P100456 Abcd3 ProximalPromoter P100456 ProximalPromoter Unique Tile chr3:121807476-121808388 (-) NM_008991 - 238 121807238 19299 Abcd3 AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1 ATP-binding cassette, sub-family D (ALD), member 3 MGI:1349216 Mm.194462 3 3 G-H1|3 56.6 cM ABCD3 5825 0 cacaaacggcatatggaggat tctctgcttgcacacacccta 4 12 1 1.1.1.4.1.12 BCBC-5A-0 14093874 P101206 ProximalPromoter P101206 ProximalPromoter Unique Tile chr13:51737886-51738888 (-) 0 aaggtgaggcggatctgtgta gggtagcagcaaggacctctt 4 12 2 1.1.1.4.2.12 BCBC-5A-0 14093893 P102339 Hiat1 ProximalPromoter P102339 ProximalPromoter Unique Tile chr3:116654878-116655844 (-) NM_008246 - 324 116654554 15247 Hiat1 MGC144858 hippocampus abundant gene transcript 1 MGI:1201609 Mm.280077 3 3 G2 HIAT1 64645 NM_144902 - 48412 116704256 229782 Slc35a3 0 aatgtggctaagctgggtattca atagtttctcagatgctcaggcg 4 12 3 1.1.1.4.3.12 BCBC-5A-0 14093912 P103089 Tle1 ProximalPromoter P103089 ProximalPromoter Unique Tile chr4:71686698-71687696 (-) NM_011599 - 386 71687084 21885 Tle1 C230057C06Rik|Grg1 transducin-like enhancer of split 1, homolog of Drosophila E(spl) MGI:104636 Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716; Mm.278444; Mm.388819; Mm.399716 4 - TLE1 7088 1 cttcaaccccctgctttttactt ccttggctaaaacccacgtagac 4 12 4 1.1.1.4.4.12 BCBC-5A-0 14093931 P103929 Aldh1b1 ProximalPromoter P103929 ProximalPromoter Unique Tile chr4:45822368-45823330 (+) NM_028270 + 3113 45820217 72535 Aldh1b1 2700007F14Rik|MGC101971 aldehyde dehydrogenase 1 family, member B1 MGI:1919785 Mm.331583 4 4 B2 ALDH1B1 219 NM_018741 - 24567 45847897 75426 Igfbpl1 0 aaattctgatccctcagagtccc atggctcatcacaacgctaaagt 4 12 5 1.1.1.4.5.12 BCBC-5A-0 14093950 P104667 Gsta4 DistalPromoter P104667 DistalPromoter Unique Tile chr9:77980143-77982288 (+) NM_010357 + 4573 77977715 14860 Gsta4 5.7|GST|GST 5.7|mGsta4 glutathione S-transferase, alpha 4 MGI:1309515 Mm.2662 9 9 E1 GSTA4 2941 NM_008181 + 34081 78016369 14857 Gsta1 0 acactggagttttcctcctggtc caagaaaatgacccagctgaatg 4 12 6 1.1.1.4.6.12 BCBC-5A-0 14093969 P105033 Dapk1 DistalPromoter P105033 DistalPromoter Unique Tile chr13:60648269-60650296 (+) NM_029653 + 38248 60612048 69635 Dapk1 2310039H24Rik|2810425C21Rik|AI642003|D13Ucla1|DAP-Kinase death associated protein kinase 1 MGI:1916885 Mm.24103 13 13 B2|13 40.0 cM DAPK1 1612 0 tcctcaagggttaggaaaaccaa attcggctgttctcctatcttgc 4 12 7 1.1.1.4.7.12 BCBC-5A-0 14093988 P105976 Foxo1 DistalPromoter P105976 DistalPromoter Unique Tile chr3:52353132-52354932 (+) NM_019739 + 1370 52356302 56458 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 MGI:1890077 Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558; Mm.29891; Mm.395558 3 3 C|3 22.5 cM FOXO1A 2308 0 tcatacaggagtcaccaagcaca tgaaacggctgcctactgataaa 4 12 8 1.1.1.4.8.12 BCBC-5A-0 14094007 P001092 Blank P001092 Buffer Control Negative Blank 4 12 9 1.1.1.4.9.12 BCBC-5A-0 14094026 P203457 Loh12cr1 ProximalPromoter P203457 ProximalPromoter Unique Tile chr6:134605497-134606527 (+) NM_026371 + 146 134606673 67774 Loh12cr1 5830457J20Rik|AW124643 loss of heterozygosity, 12, chromosomal region 1 homolog (human) MGI:1915024 Mm.41892 6 6 G1 LOH12CR1 118426 NM_026345 - 7316 134598181 67729 Mansc1 2 gactatgccctggtatttttccc agataaagccttttcctaccccc 4 12 10 1.1.1.4.10.12 BCBC-5A-0 14094045 P201874 Cdkal1 ProximalPromoter P201874 ProximalPromoter Unique Tile chr13:29863066-29864081 (-) NM_144536 - 13 29863053 68916 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 MGI:1921765 Mm.212227 13 13 A3.3 CDKAL1 54901 2 gtcaggagatgcagcttagtggt caggaaactgcacagacttcaga 4 12 11 1.1.1.4.11.12 BCBC-5A-0 14094064 P203895 Nr2e1 ProximalPromoter P203895 ProximalPromoter Unique Tile chr10:42271884-42272900 (-) NM_152229 - 119 42272003 21907 Nr2e1 Mtl1|Mtll|TLL|Tlx|XTLL|fierce|frc nuclear receptor subfamily 2, group E, member 1 MGI:1100526 Mm.287100 10 10 B2|10 25.5 cM NR2E1 7101 2 cagagagctctaggatttcgggt gggaaactagattgctgggagat 4 12 12 1.1.1.4.12.12 BCBC-5A-0 14094083 P203283 1200013P24Rik ProximalPromoter P203283 ProximalPromoter Unique Tile chr16:3799024-3799940 (+) NM_029090 + 30 3799910 74763 1200013P24Rik AI315146 RIKEN cDNA 1200013P24 gene MGI:1922013 Mm.133257 16 16 A1 FLJ14154 79903 NM_001033159 - 11422 3787602 71063 Zfp597 0 actgaaagagagcacacgaatcc cgacagattatgtaaccggcag 4 12 13 1.1.1.4.13.12 BCBC-5A-0 14094102 P204906 Polr2a ProximalPromoter P204906 ProximalPromoter Unique Tile chr11:69574697-69575600 (-) NM_009089 - 279 69574418 20020 Polr2a 220kDa|Rpo2-1 polymerase (RNA) II (DNA directed) polypeptide A MGI:98086 Mm.16533 11 11 B1-C|11 37.0 cM POLR2A 5430 NM_019871 - 2439 69578039 56293 Amac1 0 tgaaaggtgtagggtttccttga ggaagaagaaaaggggtaacgaa 4 12 14 1.1.1.4.14.12 BCBC-5A-0 14094121 P206347 Rnf17 ProximalPromoter P206347 ProximalPromoter Unique Tile chr14:55355616-55356543 (+) NM_001033043 + 264 55356807 30054 Rnf17 MMIP-2|Mmip2|TDRD4 ring finger protein 17 MGI:1353419 Mm.287783 14 14 C3 RNF17 56163 NM_138652 + 36438 55319178 192113 Atp12a 0 cccgatgggctttattcttaact agggtttctctgtatagccctgg 4 12 15 1.1.1.4.15.12 BCBC-5A-0 14094140 P202337 Papln ProximalPromoter P202337 ProximalPromoter Unique Tile chr12:84652656-84653581 (+) NM_130887 + 173 84653408 170721 Papln E030033C16Rik papilin, proteoglycan-like sulfated glycoprotein MGI:2386139 Mm.133443 12 12 D1 PAPLN 89932 NM_198422 + 30001 84683582 231474 Paqr3 0 gtactgtggtggtggtggtgtaa cagatctcccatggtctctcact 4 12 16 1.1.1.4.16.12 BCBC-5A-0 14094159 P209305 Cno ProximalPromoter P209305 ProximalPromoter Unique Tile chr5:37037055-37037967 (-) NM_133724 - 147 37036908 117197 Cno 2610101N07Rik cappuccino MGI:1929230 Mm.46744 5 5 B3 CNO 55330 NM_026242 - 46986 37084953 67568 Mrfap1 0 gttccactgttcttgcttttgct gtagtgtgtgccagcagagtttg 4 12 17 1.1.1.4.17.12 BCBC-5A-0 14094178 P209676 Ankrd54 ProximalPromoter P209676 ProximalPromoter Unique Tile chr15:78890374-78891311 (-) NM_144849 - 260 78890114 223690 Ankrd54 C730048E16Rik|EST1068184|EST475269|MGC25673 ankyrin repeat domain 54 MGI:2444209 Mm.24262 15 15 E1|15 46.6 cM ANKRD54 129138 NM_145139 + 11166 78902477 223691 Eif3s6ip 2 gctagcctggtccacagagtaaa aaatagctgcgttcaggacactc 4 12 18 1.1.1.4.18.12 BCBC-5A-0 14094197 P001643 Blank P001643 Buffer Control Negative Blank 4 12 19 1.1.1.4.19.12 BCBC-5A-0 14093856 P100390 Pafah1b2 ProximalPromoter P100390 ProximalPromoter Unique Tile chr9:45736159-45737142 (-) NM_008775 - 293 45735866 18475 Pafah1b2 AI747451|AU021353|Pafahb|mus[b] platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit MGI:108415 Mm.200859 9 9 A5.2 PAFAH1B2 5049 NM_027498 + 26730 45763872 70661 BC033915 0 aagccaagtggagaggaaagg cagattgcagagaatggggag 4 13 1 1.1.1.4.1.13 BCBC-5A-0 14093875 P101230 Gyg ProximalPromoter P101230 ProximalPromoter Unique Tile chr3:20347622-20348655 (-) NM_013755 - 495 20347127 27357 Gyg AU017667|Gyg1 glycogenin MGI:1351614 Mm.6375 3 3 A2|3 12.5 cM GYG1 2992 0 ccagaaataggagggcagctt agaaagccccagtgcctttag 4 13 2 1.1.1.4.2.13 BCBC-5A-0 14093894 P102363 Lipc ProximalPromoter P102363 ProximalPromoter Unique Tile chr9:70734200-70735231 (-) NM_008280 - 175 70734025 15450 Lipc AI256194|HL|Hpl lipase, hepatic MGI:96216 Mm.390187 9 9 D|9 39.0 cM LIPC 3990 0 ctgagtcctttctgtaccccctt aatcccaaagagagatgaaagcc 4 13 3 1.1.1.4.3.13 BCBC-5A-0 14093913 P103113 Vill ProximalPromoter P103113 ProximalPromoter Unique Tile chr9:118905338-118906372 (+) NM_011700 + 4873 118901499 22351 Vill Villp villin-like MGI:1201781 Mm.83817 9 9 F4 VILL 50853 NM_019676 - 35803 118942175 18799 Plcd1 0 gcttcagactctgccctttaaca cctgacacctaaagctctccaaa 4 13 4 1.1.1.4.4.13 BCBC-5A-0 14093932 P104235 DistalPromoter P104235 DistalPromoter No Hits Tile 0 gatttctatgggtgtagccctgg gcttcatgcatggtagacagacc 4 13 5 1.1.1.4.5.13 BCBC-5A-0 14093951 P104691 Id2 DistalPromoter P104691 DistalPromoter Unique Tile chr12:25686326-25688668 (-) NM_010496 - 1168 25685158 15902 Id2 AI255428|C78922|Idb2 inhibitor of DNA binding 2 MGI:96397 Mm.34871 12 12 B|12 7.0 cM ID2 3398 1 tgagtctcagagaggccagaaga agaggaagaatgcagaatccagg 4 13 6 1.1.1.4.6.13 BCBC-5A-0 14093970 P105057 Ccni DistalPromoter P105057 DistalPromoter Unique Tile chr5:94282943-94284869 (-) NM_017367 - 1711 94281232 12453 Ccni - cyclin I MGI:1341077 Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424; Mm.175502; Mm.250419; Mm.297636; Mm.394424 5 5 E3.3-F1.3 CCNI 10983 0 ggtccctgaaagtacaggcaagt tggaaaatttcagaccagtgtgg 4 13 7 1.1.1.4.7.13 BCBC-5A-0 14093989 P105998 Trpc4ap DistalPromoter P105998 DistalPromoter Unique Tile chr2:155384872-155387044 (-) NM_019828 - 1089 155383783 56407 Trpc4ap 4833429F06Rik|D2Ertd113e|FLJ00177|Trrp4ap|mFLJ00177|truss transient receptor potential cation channel, subfamily C, member 4 associated protein MGI:1930751 Mm.268304 2 2 90.0 cM TRPC4AP 26133 NM_145537 - 33783 155420827 108687 Edem2 1 caccagctatccccaactcttct actgcctggtgacctggtttaag 4 13 8 1.1.1.4.8.13 BCBC-5A-0 14094008 P000816 Blank P000816 Buffer Control Negative Blank 4 13 9 1.1.1.4.9.13 BCBC-5A-0 14094027 P203481 C230094A16Rik ProximalPromoter P203481 ProximalPromoter Unique Tile chr11:29664349-29665335 (-) NM_146016 - 116 29664233 237711 C230094A16Rik 2900083P10Rik|MGC38936 RIKEN cDNA C230094A16 gene MGI:2442895 Mm.240780; Mm.338324; Mm.240780; Mm.338324; Mm.240780; Mm.338324; Mm.240780; Mm.338324; Mm.240780; Mm.338324; Mm.240780; Mm.338324 11 11 A3.3 NM_024226;NM_194053;NM_194051;NM_194054;NM_194052; + 45780 29618569 68585 Rtn4 0 tgctttgttcaagtcatccaaga aagcactttcaaagcatcaggtc 4 13 10 1.1.1.4.10.13 BCBC-5A-0 14094046 P201898 Plcd1 ProximalPromoter P201898 ProximalPromoter Unique Tile chr9:118950215-118951145 (+) NM_019676 - 8021 118942194 18799 Plcd1 AW212592|C79986 phospholipase C, delta 1 MGI:97614 Mm.23963 9 9 F3 PLCD1 5333 NM_011700 + 38070 118912145 22351 Vill 2 ttgcttttgagaaagggtctcac ttcctttagaagagcgtcaccac 4 13 11 1.1.1.4.11.13 BCBC-5A-0 14094065 P203919 Solh ProximalPromoter P203919 ProximalPromoter Unique Tile chr17:25713526-25714561 (-) NM_015830 - 220 25713306 50817 Solh - small optic lobes homolog (Drosophila) MGI:1355075 Mm.216072 17 17 A3 SOLH 6650 NM_175505 + 34455 25679071 240054 A930017K11Rik 0 atgaatgagcagtgacttcacca agttcacggatgcagttggtact 4 13 12 1.1.1.4.12.13 BCBC-5A-0 14094084 P204374 Ereg ProximalPromoter P204374 ProximalPromoter Unique Tile chr5:92148688-92149615 (+) NM_007950 + 206 92149821 13874 Ereg MGC36144 epiregulin MGI:107508 Mm.4791 5 5 E2 EREG 2069 NM_053087 + 45972 92102716 71920 Epgn 0 tttccatcccaatctctttgtgt tactccccaaacttttccatcct 4 13 13 1.1.1.4.13.13 BCBC-5A-0 14094103 P204930 Cxcl5 ProximalPromoter P204930 ProximalPromoter Unique Tile chr5:91833310-91834334 (+) NM_009141 + 243 91834577 20311 Cxcl5 AMCF-II|ENA-78|GCP-2|LIX|Scyb5|Scyb6|chemokine chemokine (C-X-C motif) ligand 5 MGI:1096868 Mm.4660 5 5 E2|5 53.0 cM CXCL6 6372 NM_023785 + 9383 91843717 57349 Cxcl7 0 agtcagaacggatgctatcttgc ctgctctgggtcagactccttta 4 13 14 1.1.1.4.14.13 BCBC-5A-0 14094122 P206371 Tcn2 ProximalPromoter P206371 ProximalPromoter Unique Tile chr11:3832256-3833235 (-) NM_015749 - 670 3831586 21452 Tcn2 AW208754|Tcn-2 transcobalamin 2 MGI:98534 Mm.20948 11 11 A1|11 3.0 cM TCN2 6948 NM_153142 - 17589 3814667 103710 Slc35e4 0 ccagacacccagtgtagtcagtg aacgtcgcttaaagacatcttgg 4 13 15 1.1.1.4.15.13 BCBC-5A-0 14094141 P202361 Pcyt1b ProximalPromoter P202361 ProximalPromoter Unique Tile chrX:89906413-89907438 (+) NM_177546;NM_211138; + 143 89907581 236899 Pcyt1b AW045697|CTTbeta phosphate cytidylyltransferase 1, choline, beta isoform MGI:2147987 Mm.166467 X X C3 PCYT1B 9468 NM_008892 - 21539 89884874 18968 Pola1 0 ggatgaactcatggacagaaagg atgctcctggaatgacaaacatt 4 13 16 1.1.1.4.16.13 BCBC-5A-0 14094160 P209239 Dscr6 ProximalPromoter P209239 ProximalPromoter Unique Tile chr16:94436147-94437100 (+) NM_133229 + 117 94437217 170765 Dscr6 Ripply3 Down syndrome critical region homolog 6 (human) MGI:2181192 Mm.42604 16 16 C4 DSCR6 53820 NM_139145 - 39493 94396654 110948 Hlcs 0 tggctcaacatgagtgtgttttt accagaaaggctcaaggaagaga 4 13 17 1.1.1.4.17.13 BCBC-5A-0 14094179 P209700 BC018465 ProximalPromoter P209700 ProximalPromoter Unique Tile chr2:153914310-153915367 (+) NM_144890 + 147 153915220 228802 BC018465 MGC27784 cDNA sequence BC018465 MGI:2385160 Mm.167411 2 2 H1 C20orf115 402016 NM_153418;NM_001012392; + 22490 153891820 228801 U46068 0 tgtgtctcggctcccttatgtat catgcttcttcaagctcattcct 4 13 18 1.1.1.4.18.13 BCBC-5A-0 14094198 P001739 Blank P001739 Buffer Control Negative Blank 4 13 19 1.1.1.4.19.13 BCBC-5A-0 14093857 P100414 Pkd2 ProximalPromoter P100414 ProximalPromoter Unique Tile chr5:104698498-104699480 (+) NM_008861 + 271 104699751 18764 Pkd2 C030034P18Rik|TRPP2 polycystic kidney disease 2 MGI:1099818 Mm.6442 5 5 E5|5 55.0 cM PKD2 5311 NM_009263 + 21992 104676506 20750 Spp1 0 gatgatgacgatgaccacgaa cagaaagaaatcaccaaggcg 4 14 1 1.1.1.4.1.14 BCBC-5A-0 14093876 P101536 Vapb ProximalPromoter P101536 ProximalPromoter Unique Tile chr2:173379281-173380319 (+) NM_019806 + 190 173380509 56491 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C MGI:1928744 Mm.260456 2 2 H3|2 103.0 cM VAPB 9217 0 gcacaaggcgtataatggagc gcggtctccagtgagactgtt 4 14 2 1.1.1.4.2.14 BCBC-5A-0 14093895 P102387 Kcna2 ProximalPromoter P102387 ProximalPromoter Unique Tile chr3:107230929-107231993 (+) NM_008417 + 2371 107229622 16490 Kcna2 Akr6a4|Kca1-2|Kv1.2|Mk-2 potassium voltage-gated channel, shaker-related subfamily, member 2 MGI:96659 Mm.56930 3 3 F2.3|3 48.8 cM KCNA2 3737 NM_175410 + 11994 107218935 109226 A930002I21Rik 0 gacatggctaaggtcagagagga acagaggcaggtaaggacatgag 4 14 3 1.1.1.4.3.14 BCBC-5A-0 14093914 P103137 ProximalPromoter P103137 ProximalPromoter No Hits Tile 1 accactaagcccagttagtgctg ttctgtttctaggcttctgggag 4 14 4 1.1.1.4.4.14 BCBC-5A-0 14093933 P104259 Wbp4 DistalPromoter P104259 DistalPromoter Unique Tile chr14:78246886-78248847 (+) NM_018765 - 31463 78215423 22380 Wbp4 AW545037|BB101031|FBP21 WW domain binding protein 4 MGI:109568 Mm.20938 14 14 D3 WBP4 11193 NM_007920 + 31538 78215348 13709 Elf1 0 tgcagtgtccagatacagggaat agcactacagcaatgtcctccag 4 14 5 1.1.1.4.5.14 BCBC-5A-0 14093952 P104625 Ccr1 DistalPromoter P104625 DistalPromoter Unique Tile chr9:123814328-123816784 (-) NM_009912 - 2865 123817193 12768 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 MGI:104618 Mm.274927 9 9 F|9 71.6 cM CCR1 1230 NM_007718 - 10422 123827206 12770 Ccr1l1 1 cttcgccaaatagcaacaaaatg tatccaacaggagacagcacaca 4 14 6 1.1.1.4.6.14 BCBC-5A-0 14093971 P105081 Smarcal1 DistalPromoter P105081 DistalPromoter Unique Tile chr1:72513599-72515639 (+) NM_018817 + 838 72516477 54380 Smarcal1 6030401P21Rik|Mharp Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 MGI:1859183 Mm.274232 1 1 C3|1 40.0 cM SMARCAL1 50485 0 tcttcacagcaatagaaacccca ccatttctgagcacagcattctt 4 14 7 1.1.1.4.7.14 BCBC-5A-0 14093990 P106020 Hirip5 DistalPromoter P106020 DistalPromoter Unique Tile chr6:86972101-86974145 (+) NM_020045 + 1392 86975537 56748 Hirip5 0610006G17Rik|CGI-33 histone cell cycle regulation defective interacting protein 5 MGI:1913290 Mm.23809 6 6 D2 HIRIP5 27247 NM_177762;NM_001040106; + 9972 86962129 269774 Aak1 0 ttcactctgcagtccagctaacc tcaattctcagcaaccacatgaa 4 14 8 1.1.1.4.8.14 BCBC-5A-0 14094009 P000912 Blank P000912 Buffer Control Negative Blank 4 14 9 1.1.1.4.9.14 BCBC-5A-0 14094028 P202819 C130090K23Rik ProximalPromoter P202819 ProximalPromoter Unique Tile chr5:73684005-73685102 (+) NM_181323;NM_145560; + 110 73685212 231293 C130090K23Rik - RIKEN cDNA C130090K23 gene MGI:2444131 Mm.280211 5 5 C3.3 FLJ21511 80157 0 gcagagagcacatcttcaacaga agtccacgcagagaggtttgtag 4 14 10 1.1.1.4.10.14 BCBC-5A-0 14094047 P201923 Camk2b ProximalPromoter P201923 ProximalPromoter End Repeat Tile chr11:5965708-5966653 (-) NM_007595 - 43 5965751 12323 Camk2b Camk2d|MGC90738 calcium/calmodulin-dependent protein kinase II, beta MGI:88257 Mm.4857 11 11 A1|11 0.5 cM CAMK2B 816 2 gctccaaacaccaagagtcaaat gagatctgctcgctctgtccc 4 14 11 1.1.1.4.11.14 BCBC-5A-0 14094066 P203943 Cdyl2 ProximalPromoter P203943 ProximalPromoter Unique Tile chr8:119618912-119619854 (-) NM_029441 - 56 119618968 75796 Cdyl2 1700029M19Rik|4930453I21Rik chromodomain protein, Y chromosome-like 2 MGI:1923046 Mm.159575 8 8 E1 CDYL2 124359 1 ctgcagacacttgtagttgggtg tgcgtgtgtataagtgtgtggtg 4 14 12 1.1.1.4.12.14 BCBC-5A-0 14094085 P204398 Fgf7 ProximalPromoter P204398 ProximalPromoter Unique Tile chr2:125725324-125726402 (+) NM_008008 + 178 125726224 14178 Fgf7 Kgf fibroblast growth factor 7 MGI:95521 Mm.330557 2 2 F-G FGF7 2252 0 tatgctattgctctcaggaaggc ttcacagctcaaaagtctttccc 4 14 13 1.1.1.4.13.14 BCBC-5A-0 14094104 P204862 Pxmp3 ProximalPromoter P204862 ProximalPromoter Unique Tile chr3:5559270-5560287 (-) NM_008994 - 69 5559201 19302 Pxmp3 35kDa|D3Ertd138e|PEX2|PMP35 peroxisomal membrane protein 3 MGI:107486 Mm.132336 3 3 A1|3 1.0 cM PXMP3 5828 2 ggtgcatctctagacacatccct gaattacacccagaagcaacacc 4 14 14 1.1.1.4.14.14 BCBC-5A-0 14094123 P206396 Polg2 ProximalPromoter P206396 ProximalPromoter Unique Tile chr11:106595872-106596946 (-) NM_015810 - 340 106595532 50776 Polg2 - polymerase (DNA directed), gamma 2, accessory subunit MGI:1354947 Mm.859 11 11 E1 POLG2 11232 NM_007840 - 7483 106604429 13207 Ddx5 2 gtaggatcaccagcaaacagctt atgttgtcctggacggtactgat 4 14 15 1.1.1.4.15.14 BCBC-5A-0 14094142 P202385 Slc7a6 ProximalPromoter P202385 ProximalPromoter Unique Tile chr8:109056683-109057762 (+) NM_178798 + 241 109058003 330836 Slc7a6 AI643885|LAT-2|LAT3 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 MGI:2142598 Mm.46749 8 8 D3 NM_133792 + 17156 109039527 192654 Lypla3 1 ccagggctatacagagaaaccct cagtcacttgaagcctctggg 4 14 16 1.1.1.4.16.14 BCBC-5A-0 14094161 P209263 Zfp617 ProximalPromoter P209263 ProximalPromoter Unique Tile chr8:74850603-74851572 (+) NM_133358 + 280 74851852 170938 Zfp617 Zfps11-6 zinc finger protein 617 MGI:2684459 Mm.251482 8 8 B3.3 NM_145624 + 39496 74811107 236193 Zfp709 0 gatttggtccagacaatgaaagc gtctccgaagcctaagtgacaga 4 14 17 1.1.1.4.17.14 BCBC-5A-0 14094180 P208842 Trim26 ProximalPromoter P208842 ProximalPromoter Unique Tile chr17:36444108-36445053 (+) NM_030698;NM_001025599; + 183 36445236 22670 Trim26 AI462198|Zfp173|Zfp1736 tripartite motif protein 26 MGI:1337056 Mm.34587 17 17 B1|17 20.4 cM TRIM26 7726 NM_201611 + 23881 36420227 399549 H2-M10.6 0 ctgagatcaaagtccagagcaca aaaaggaaagtgaaatcggaagc 4 14 18 1.1.1.4.18.14 BCBC-5A-0 14094199 P001835 Blank P001835 Buffer Control Negative Blank 4 14 19 1.1.1.4.19.14 BCBC-5A-0 14093858 P100438 Npepps ProximalPromoter P100438 ProximalPromoter Unique Tile chr11:97097077-97098138 (-) NM_008942 - 411 97096666 19155 Npepps MGC102199|MP100|Psa|R74825|goku aminopeptidase puromycin sensitive MGI:1101358 Mm.29824 11 11 D|11 56.0 cM NPEPPS 9520 NM_025927 + 33807 97131945 67036 Mrpl45 0 caactgggtctcaattccagc gtcgctccaaccagtgaaatc 4 15 1 1.1.1.4.1.15 BCBC-5A-0 14093877 P101560 Cript ProximalPromoter P101560 ProximalPromoter Unique Tile chr17:86932981-86933907 (+) NM_019936 + 5 86933912 56724 Cript 1200020A08Rik|AA589469 cysteine-rich PDZ-binding protein MGI:1929655 Mm.109329 17 17 E4 CRIPT 9419 NM_008838 - 180 86933727 18701 Pigf 0 tacacacgcacaagccatttc acgacttcctcttccggctac 4 15 2 1.1.1.4.2.15 BCBC-5A-0 14093896 P102321 Slc39a7 ProximalPromoter P102321 ProximalPromoter Unique Tile chr17:33642253-33643117 (-) NM_008202 - 241 33642012 14977 Slc39a7 AA408174|AI117660|AL024048|H-2Ke4|H2-Ke4|KE4|Ke-4|MGC143814|MGC143815|Ring5 solute carrier family 39 (zinc transporter), member 7 MGI:95909 Mm.18556 17 17 B1|17 18.48 cM SLC39A7 7922 NM_011306 + 52 33642305 20182 Rxrb 1 tctaatagtcgtgagaggaggcg agacttcccgtctgtacaaagat 4 15 3 1.1.1.4.3.15 BCBC-5A-0 14093915 P103161 ProximalPromoter P103161 ProximalPromoter Unique Tile chr10:84741800-84742841 (+) 0 agcaggggatatgagtcagtcag acctaccacaccaaccaaagaga 4 15 4 1.1.1.4.4.15 BCBC-5A-0 14093934 P104283 Fstl1 DistalPromoter P104283 DistalPromoter Unique Tile chr16:37693418-37695373 (+) NM_008047 + 920 37696293 14314 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 MGI:102793 Mm.182434; Mm.397949; Mm.182434; Mm.397949; Mm.182434; Mm.397949; Mm.182434; Mm.397949; Mm.182434; Mm.397949; Mm.182434; Mm.397949; Mm.182434; Mm.397949; Mm.182434; Mm.397949 16 16 B3|16 27.3 cM FSTL1 11167 0 ttgtcccagcacttctcagctac gttctttcgctctggggtttaga 4 15 5 1.1.1.4.5.15 BCBC-5A-0 14093953 P104649 Fusip1 DistalPromoter P104649 DistalPromoter Unique Tile chr4:135124720-135126556 (+) NM_010178 + 1266 135127822 14105 Fusip1 FUSIP2|NSSR1|NSSR2|Nssr|SRrp40|TASR|TASR1|TASR2 FUS interacting protein (serine-arginine rich) 1 MGI:1333805 Mm.10229 4 4 D3 FUSIP1 10772 NM_026383 - 19339 135145895 52830 Pnrc2 2 ggatacgcagagagaaaccctgt agttccaatgtaggtggctcaca 4 15 6 1.1.1.4.6.15 BCBC-5A-0 14093972 P107429 Trfr2 DistalPromoter P107429 DistalPromoter Unique Tile chr5:137797324-137799472 (+) NM_015799 + 1120 137800592 50765 Trfr2 Tfr2 transferrin receptor 2 MGI:1354956 Mm.21757 5 5 G2 TFR2 7036 NM_031404 + 13982 137783342 83766 Actl6b 1 cattcctcaggcaccttctacct ctaagaaattcgtgccccagagt 4 15 7 1.1.1.4.7.15 BCBC-5A-0 14093991 P106042 Zc3h8 DistalPromoter P106042 DistalPromoter Unique Tile chr2:128636939-128639023 (-) NM_020594 - 1478 128635461 57432 Zc3h8 AU020882|E130108N08Rik|Fliz1|Zc3hdc8 zinc finger CCCH type containing 8 MGI:1930128 Mm.11675 2 2 F1 ZC3H8 84524 NM_178404 + 19854 128658877 78751 Zc3h6 1 ctaagtcctctggaagagcagcc ttatgtccagccttgaacagagc 4 15 8 1.1.1.4.8.15 BCBC-5A-0 14094010 P001008 Blank P001008 Buffer Control Negative Blank 4 15 9 1.1.1.4.9.15 BCBC-5A-0 14094029 P202843 Adat1 ProximalPromoter P202843 ProximalPromoter Unique Tile chr8:114879227-114880190 (-) NM_013925 - 252 114878975 30947 Adat1 MMADAT1|mADAT1 adenosine deaminase, tRNA-specific 1 MGI:1353631 Mm.282162 8 8 D3 ADAT1 23536 NM_053092 - 17749 114897939 85305 Kars 1 ccaacctccacaagagagaagaa tttttcgagacagggtttctctg 4 15 10 1.1.1.4.10.15 BCBC-5A-0 14094048 P201854 Tmem74 ProximalPromoter P201854 ProximalPromoter Unique Tile chr15:43700239-43701330 (-) NM_175502 - 136 43700103 239408 Tmem74 AA549547|B230382K22Rik transmembrane protein 74 MGI:2443417 Mm.41219 15 15 B3.2 TMEM74 157753 0 ggctggaatcaagaaacagagaa aggattttgctcttctgggaaac 4 15 11 1.1.1.4.11.15 BCBC-5A-0 14094067 P203967 AK122525 ProximalPromoter P203967 ProximalPromoter Unique Tile chr10:43166695-43167625 (+) NM_199028 + 71 43167554 331623 AK122525 mKIAA1553 cDNA sequence AK122525 MGI:2677212 Mm.26897 10 10 B2 KIAA1553 57673 1 acgcagcttaaaagttgacttgg ttttcccctctctttgtgtgtgt 4 15 12 1.1.1.4.12.15 BCBC-5A-0 14094086 P204422 Fxr1h ProximalPromoter P204422 ProximalPromoter Unique Tile chr3:34210533-34211631 (+) NM_008053 + 25 34211656 14359 Fxr1h 1110050J02Rik|9530073J07Rik|Fxr1|Fxr1p fragile X mental retardation gene 1, autosomal homolog MGI:104860 Mm.259021 3 3 B FXR1 8087 0 tggaggctaagacaagagaatgg ttctagaaactttccaacgcgag 4 15 13 1.1.1.4.13.15 BCBC-5A-0 14094105 P204887 Rbpsuh ProximalPromoter P204887 ProximalPromoter Unique Tile chr5:53877294-53878330 (+) NM_009035 + 262 53878592 19664 Rbpsuh AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBPjk recombining binding protein suppressor of hairless (Drosophila) MGI:96522 Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686; Mm.209292; Mm.321004; Mm.427686 5 5 C1-C3|5 37.5 cM RBPSUH 3516 2 cacatttcaggaaagtaccaggc gactgtctccattcatttgctcc 4 15 14 1.1.1.4.14.15 BCBC-5A-0 14094124 P206904 Scamp5 ProximalPromoter P206904 ProximalPromoter Unique Tile chr9:57266450-57267491 (-) NM_020270 - 289 57266161 56807 Scamp5 AI426171|AW558254|Sc5 secretory carrier membrane protein 5 MGI:1928948 Mm.102278 9 9 B SCAMP5 192683 NM_176831 - 28199 57238251 66812 Ppcdc 0 atctggtctctgtttgaaggctg agtgccttaacttccacatctgc 4 15 15 1.1.1.4.15.15 BCBC-5A-0 14094143 P202409 Ticam2 ProximalPromoter P202409 ProximalPromoter Unique Tile chr18:46699651-46700733 (-) NM_173394 - 212 46699863 225471 Ticam2 B430113A10|MGC107370|TICAM-2|TRAM|Tirp|Trif toll-like receptor adaptor molecule 2 MGI:3040056 Mm.149280 18 18 C TICAM2 353376 NM_010120 + 22301 46723034 13664 Eif1a 0 ccaaggaggtctgtgtaaattgg tgactgtcgtagatcttgtccca 4 15 16 1.1.1.4.16.15 BCBC-5A-0 14094162 P209287 Cxxc5 ProximalPromoter P209287 ProximalPromoter Unique Tile chr18:35955610-35956512 (+) NM_133687 + 721 35955791 67393 Cxxc5 4930415K17Rik|MGC101987 CXXC finger 5 MGI:1914643 Mm.94560 18 18 B3 CXXC5 51523 1 caaagctgatctgggagggag cttgggaaggcttcggtatagg 4 15 17 1.1.1.4.17.15 BCBC-5A-0 14094181 P208866 Zfp313 ProximalPromoter P208866 ProximalPromoter Unique Tile chr2:167193432-167194441 (+) NM_030743 + 210 167194651 81018 Zfp313 1110008J21Rik|AI225886|AW549494|Zfp228|Znf228 zinc finger protein 313 Mm.22225 2 - NM_170756 - 9353 167184079 263876 Spata2 1 acacacacacacacacaaagtgc acaggaactcagaccgtgaatgt 4 15 18 1.1.1.4.18.15 BCBC-5A-0 14094200 P001559 Blank P001559 Buffer Control Negative Blank 4 15 19 1.1.1.4.19.15 BCBC-5A-0 14093859 P100462 Rad21 ProximalPromoter P100462 ProximalPromoter Unique Tile chr15:51812950-51814013 (-) NM_009009 - 8686 51821636 19357 Rad21 SCC1|mKIAA0078 RAD21 homolog (S. pombe) MGI:108016 Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243; Mm.182628; Mm.392243 15 15 D3 RAD21 5885 0 ttcttcaatgggtgagtggct caccgccaagtattaagacgg 4 16 1 1.1.1.4.1.16 BCBC-5A-0 14093878 P101584 B3galnt1 ProximalPromoter P101584 ProximalPromoter Unique Tile chr3:69664291-69665217 (-) NM_020026 - 2982 69667273 26879 B3galnt1 B3galt3|b3GT3 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 MGI:1349405 Mm.153710 3 3 E1 B3GALNT1 8706 0 acctctctgagcaaggtgtgc tgccaggattctaccctctga 4 16 2 1.1.1.4.2.16 BCBC-5A-0 14093897 P102345 Hmgcs2 ProximalPromoter P102345 ProximalPromoter Unique Tile chr3:98364786-98365883 (+) NM_008256 + 32 98365851 15360 Hmgcs2 1300002P16|mHS 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 MGI:101939 Mm.289131 3 3 F2.2|3 48.0 cM HMGCS2 3158 0 aggaagatcctaggagccctttt aggtatcaacagaaagccagcag 4 16 3 1.1.1.4.3.16 BCBC-5A-0 14093916 P103467 Smc1a ProximalPromoter P103467 ProximalPromoter Unique Tile chrX:147355728-147356703 (+) NM_019710 + 440 147357143 24061 Smc1a 5830426I24Rik|KIAA0178|SB1.8|SMCB|Smc1|Smc1alpha|Smc1l1|mKIAA0178 structural maintenance of chromosomes 1A MGI:1344345 Mm.26412 X X F3 SMC1A 8243 NM_025660 - 302 147357005 66611 Ribc1 0 cacttgcacacagttacaaagcc cgagcttagagtgtgaggacgat 4 16 4 1.1.1.4.4.16 BCBC-5A-0 14093935 P104307 Cfb DistalPromoter P104307 DistalPromoter Unique Tile chr17:34471405-34473420 (-) NM_008198 - 1132 34470273 14962 Cfb AI195813|AI255840|B|Bf|FB|H2-Bf complement factor B MGI:105975 Mm.653 17 17 B1|17 18.85 cM CFB 629 NM_138580 + 12431 34458974 27632 Rdbp 0 ttccaagacagccagagctacac gcaaggattgtcatcttcctcct 4 16 5 1.1.1.4.5.16 BCBC-5A-0 14093954 P104673 Gusb DistalPromoter P104673 DistalPromoter Unique Tile chr5:130289145-130290960 (-) NM_010368 - 1593 130287552 110006 Gusb AI747421|Gur|Gus|Gus-r|Gus-s|Gus-t|Gus-u|Gut|asd|g glucuronidase, beta MGI:95872 Mm.3317 5 5 G1.3 GUSB 2990 NM_133768 - 18074 130309034 109900 Asl 0 ctgagtcagggttactggggact gtggtgcatagacatacatgcca 4 16 6 1.1.1.4.6.16 BCBC-5A-0 14093973 P107451 DistalPromoter P107451 DistalPromoter No Hits Tile 1 atcaatggtctcaactccccaat gagaaatgactgagaagcgctga 4 16 7 1.1.1.4.7.16 BCBC-5A-0 14093992 P105984 Mtch2 DistalPromoter P105984 DistalPromoter Unique Tile chr2:90644634-90646670 (+) NM_019758 + 1323 90647993 56428 Mtch2 2310034D24Rik|4930539J07Rik|HSPC032 mitochondrial carrier homolog 2 (C. elegans) MGI:1929260 Mm.28023 2 2 E1 MTCH2 23788 NM_026161 + 40028 90686698 67445 C1qtnf4 0 cttccaaatgctgggattaaagg acctagcctggcatacacaacaa 4 16 8 1.1.1.4.8.16 BCBC-5A-0 14094011 P001104 Blank P001104 Buffer Control Negative Blank 4 16 9 1.1.1.4.9.16 BCBC-5A-0 14094030 P202867 D19Ertd386e ProximalPromoter P202867 ProximalPromoter Unique Tile chr19:42570888-42571917 (+) NM_177464 + 198 42572115 52013 D19Ertd386e 1700036B12Rik|AI450607|C10orf28|GIDRP86 DNA segment, Chr 19, ERATO Doi 386, expressed MGI:1196316 Mm.254169; Mm.396211; Mm.254169; Mm.396211; Mm.254169; Mm.396211; Mm.254169; Mm.396211; Mm.254169; Mm.396211; Mm.254169; Mm.396211; Mm.254169; Mm.396211; Mm.254169; Mm.396211; Mm.254169; Mm.396211 19 19 C3|19 41.0 cM C10orf28 27291 0 gggaaactttttaggaaggctca atcttctcacgtcctgctcaatc 4 16 10 1.1.1.4.10.16 BCBC-5A-0 14094049 P201880 Ap1s2 ProximalPromoter P201880 ProximalPromoter Unique Tile chrX:159252027-159253070 (+) NM_026887 + 194 159253264 108012 Ap1s2 1500012A13Rik|AI853648|EST1 adaptor-related protein complex 1, sigma 2 subunit MGI:1889383 Mm.146736; Mm.426783; Mm.146736; Mm.426783; Mm.146736; Mm.426783; Mm.146736; Mm.426783; Mm.146736; Mm.426783; Mm.146736; Mm.426783; Mm.146736; Mm.426783; Mm.146736; Mm.426783; Mm.146736; Mm.426783; Mm.146736; Mm.426783; Mm.146736; Mm.426783; Mm.146736; Mm.426783 X X F5 AP1S2 8905 NM_178794;NM_009453; - 49624 159302694 22184 U2af1-rs2 1 atgagtagcatttgacaggggaa gagaagccgattggtcaaataac 4 16 11 1.1.1.4.11.16 BCBC-5A-0 14094068 P205149 Actg2 ProximalPromoter P205149 ProximalPromoter Unique Tile chr6:83502092-83503094 (-) NM_009610 - 202 83501890 11468 Actg2 ACTA3|Act-4|Act4|SMGA actin, gamma 2, smooth muscle, enteric MGI:104589 Mm.292865 6 6 C3|6 34.95 cM ACTG2 72 NM_013764 - 29465 83472627 27369 Dguok 0 tcatttcctccttccctttcttc gactctggaccatggatttgttc 4 16 12 1.1.1.4.12.16 BCBC-5A-0 14094087 P204446 Gbas ProximalPromoter P204446 ProximalPromoter Unique Tile chr5:130038680-130039614 (+) NM_008095 + 219 130039833 14467 Gbas AV006093|Nipsnap2 glioblastoma amplified sequence MGI:1278343 Mm.12468; Mm.395057; Mm.12468; Mm.395057; Mm.12468; Mm.395057; Mm.12468; Mm.395057; Mm.12468; Mm.395057; Mm.12468; Mm.395057; Mm.12468; Mm.395057 5 5 G1.3 GBAS 2631 NM_025450 + 8279 130030401 66258 Mrps17 0 cgactcaagagcggtaaacagat tgaagtccgagtgagaaaggaac 4 16 13 1.1.1.4.13.16 BCBC-5A-0 14094106 P204912 Nr1h4 ProximalPromoter P204912 ProximalPromoter Unique Tile chr10:88936306-88937223 (-) NM_009108 - 120 88936426 20186 Nr1h4 AI957360|Fxr|HRR1|RIP14|Rxrip14 nuclear receptor subfamily 1, group H, member 4 MGI:1352464 Mm.3095 10 10 C2|10 50.0 cM NR1H4 9971 0 ttggttttgactactgtgcctga cctttagctggcttcacactcat 4 16 14 1.1.1.4.14.16 BCBC-5A-0 14094125 P206928 S3-12 ProximalPromoter P206928 ProximalPromoter Unique Tile chr17:55703312-55704223 (-) NM_020568 - 216 55703096 57435 S3-12 mKIAA1881 plasma membrane associated protein, S3-12 MGI:1929709 Mm.12966 17 17 D KIAA1881 114782 NM_025874 - 6598 55710821 66968 2310076L09Rik 0 cctaacacacccaagattccaag acctcccactctctgcctctact 4 16 15 1.1.1.4.15.16 BCBC-5A-0 14094144 P202343 ProximalPromoter P202343 ProximalPromoter Unique Tile chr15:35315051-35315974 (+) 0 actttggcagtctcacgaatacc accgctctgggttaggaattaac 4 16 16 1.1.1.4.16.16 BCBC-5A-0 14094163 P209311 Wdr23 ProximalPromoter P209311 ProximalPromoter Unique Tile chr14:54512917-54513872 (+) NM_133734 + 230 54514102 28199 Wdr23 0710008A13Rik|C76035|D14Ucla1|GLO14 WD repeat domain 23 MGI:90168 Mm.11535 14 14 C2|14 24.5 cM WDR23 80344 NM_026808 + 15872 54529744 68680 1110028A07Rik 0 tccagccctcggttatttttatt ctgtgtcaggtttcctggtctct 4 16 17 1.1.1.4.17.16 BCBC-5A-0 14094182 P208890 Slc22a8 ProximalPromoter P208890 ProximalPromoter Unique Tile chr19:8659074-8659980 (+) NM_031194 + 268 8660248 19879 Slc22a8 Oat3|Roct solute carrier family 22 (organic anion transporter), member 8 MGI:1336187 Mm.285294 19 19 A SLC22A8 9376 NM_008766 + 25103 8685083 18399 Slc22a6 1 ggagagggagagtgtgtgtgtct aagcgagaatctggaaaaggact 4 16 18 1.1.1.4.18.16 BCBC-5A-0 14094201 P001655 Blank P001655 Buffer Control Negative Blank 4 16 19 1.1.1.4.19.16 BCBC-5A-0 14093860 P100768 F3 ProximalPromoter P100768 ProximalPromoter Unique Tile chr3:121714823-121715900 (+) NM_010171 + 332 121715568 14066 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III MGI:88381 Mm.273188 3 3 G1|3 50.0 cM F3 2152 1 aaacacaaattggaacgtccg ccccagctagccagataggtt 4 17 1 1.1.1.4.1.17 BCBC-5A-0 14093879 P101608 As3mt ProximalPromoter P101608 ProximalPromoter Unique Tile chr19:46759332-46760317 (+) NM_020577 + 466 46760783 57344 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase MGI:1929882 Mm.28566 19 19 D1 AS3MT 57412 NM_025563 + 16088 46743244 66439 2010012O05Rik 0 gaggaaggaactgcatggttg aggtcagccaggacaaacaaa 4 17 2 1.1.1.4.2.17 BCBC-5A-0 14093898 P102369 Hspe1 ProximalPromoter P102369 ProximalPromoter Unique Tile chr1:55031899-55032971 (+) NM_008303 + 38 55032933 15528 Hspe1 10kDa|MGC117526|mt-cpn10 heat shock protein 1 (chaperonin 10) MGI:104680 Mm.215667 1 1 C1 HSPE1 3336 NM_010477 - 464 55032363 15510 Hspd1 2 tacggtaacacagcagctagcaa cacgagacactcaccatgactct 4 17 3 1.1.1.4.3.17 BCBC-5A-0 14093917 P103491 Tmeff2 ProximalPromoter P103491 ProximalPromoter Unique Tile chr1:50871312-50872285 (+) NM_019790 + 194 50872091 56363 Tmeff2 4832418D20Rik transmembrane protein with EGF-like and two follistatin-like domains 2 MGI:1861735 Mm.245154 1 1 C1 TMEFF2 23671 0 gctccagggaaagagaatcaaat gtgagaggatagtccgctgagaa 4 17 4 1.1.1.4.4.17 BCBC-5A-0 14093936 P104241 Ddit3 DistalPromoter P104241 DistalPromoter Unique Tile chr10:126693950-126695755 (+) NM_007837 + 1997 126693758 13198 Ddit3 CHOP-10|CHOP10|chop|gadd153 DNA-damage inducible transcript 3 MGI:109247 Mm.110220 10 10 D3 DDIT3 1649 NM_033072 - 2230 126691720 110962 Mbd6 2 aagcttgtagactgggaagggtg ctgtcctggaactcactgtggac 4 17 5 1.1.1.4.5.17 BCBC-5A-0 14093955 P104697 Ilk DistalPromoter P104697 DistalPromoter Unique Tile chr7:105607253-105609325 (+) NM_010562 + 1243 105610568 16202 Ilk AA511515|ESTM24 integrin linked kinase MGI:1195267 Mm.274846 7 7 E1 ILK 3611 NM_025897 - 987 105610312 101867 1500003O22Rik 0 ctactttgagaagacccctggga caagtgctgggattaaaggtgtg 4 17 6 1.1.1.4.6.17 BCBC-5A-0 14093974 P107472 DistalPromoter P107472 DistalPromoter No Hits Tile 1 tcatcaatgagccatctctctcc ggattcaggaatcaaacaggacc 4 17 7 1.1.1.4.7.17 BCBC-5A-0 14093993 P106006 Olfr670 DistalPromoter P106006 DistalPromoter Unique Tile chr7:104825503-104827689 (-) NM_207146 - 9048 104834551 384703 Olfr670 GA_x5J8B7W6B6J-141796-141659|MOR32-8 olfactory receptor 670 MGI:3030504 Mm.377901 7 7 E3 NM_147043 + 13155 104812348 259045 Olfr669 2 ctcacacacacacatgaacacca gtgttccacacaccagaggtctt 4 17 8 1.1.1.4.8.17 BCBC-5A-0 14094012 P203596 Trip12 ProximalPromoter P203596 ProximalPromoter Unique Tile chr1:84638096-84639015 (-) NM_133975 - 43 84638053 14897 Trip12 1110036I07Rik|6720416K24Rik|AA410158|Gtl6|MGC31615 thyroid hormone receptor interactor 12 MGI:1309481 Mm.209265 1 1 F TRIP12 9320 1 ttaattgtcgactggttggtgtg ataaactcgtcccagagtggaca 4 17 9 1.1.1.4.9.17 BCBC-5A-0 14094031 P202891 Ccdc98 ProximalPromoter P202891 ProximalPromoter Unique Tile chr5:101061499-101062477 (-) NM_172405 - 257 101061242 70681 Ccdc98 3830405G04Rik|5630400M01Rik|AI506069|AL024423|AV118690 coiled-coil domain containing 98 MGI:1917931 Mm.221269 5 5 E4 CCDC98 84142 NM_026826 + 22439 101039060 68735 Mrps18c 0 tagggaactcgggtacatgagaa cactgcccttcatctattggaac 4 17 10 1.1.1.4.10.17 BCBC-5A-0 14094050 P201904 Ick ProximalPromoter P201904 ProximalPromoter Unique Tile chr9:77897626-77898724 (+) NM_019987 + 368 77899092 56542 Ick 2210420N10Rik|AI848300 intestinal cell kinase MGI:1934157 Mm.288719 9 9 E1 ICK 22858 NM_023605 - 3315 77894311 71538 Fbxo9 2 agtggagcaaaaggagtgatctg aatcaatgcgactaaactgcaca 4 17 11 1.1.1.4.11.17 BCBC-5A-0 14094069 P205173 Anp32a ProximalPromoter P205173 ProximalPromoter Unique Tile chr9:62138408-62139425 (+) NM_009672 + 8 62139433 11737 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A MGI:108447 Mm.269088 9 9 B|9 36.0 cM ANP32A 8125 0 gaaccagggctgtaaaggtttct taggactttgaaggctcaaccag 4 17 12 1.1.1.4.12.17 BCBC-5A-0 14094088 P204380 Evl ProximalPromoter P204380 ProximalPromoter Unique Tile chr12:109001296-109002323 (+) NM_007965 + 203 109002526 14026 Evl AI528774 Ena-vasodilator stimulated phosphoprotein MGI:1194884 Mm.207605; Mm.238841; Mm.207605; Mm.238841; Mm.207605; Mm.238841; Mm.207605; Mm.238841; Mm.207605; Mm.238841; Mm.207605; Mm.238841; Mm.207605; Mm.238841; Mm.207605; Mm.238841; Mm.207605; Mm.238841; Mm.207605; Mm.238841 12 12 F2 EVL 51466 2 gactgaaagggacttgctcacat agtgaattccagggtcttgtctg 4 17 13 1.1.1.4.13.17 BCBC-5A-0 14094107 P204936 Sec23a ProximalPromoter P204936 ProximalPromoter Unique Tile chr12:59916334-59917351 (-) NM_009147 - 13695 59930029 20334 Sec23a Msec23|Sec23r SEC23A (S. cerevisiae) MGI:1349635 Mm.209207 12 12 C1 SEC23A 10484 NM_025656 + 14051 59931402 66603 Sip1 0 ctcagagcttggtgcatagtgaa gagagtcccagcatttcctgtaa 4 17 14 1.1.1.4.14.17 BCBC-5A-0 14094126 P206952 Abcb11 ProximalPromoter P206952 ProximalPromoter Unique Tile chr2:69143565-69144567 (-) NM_021022 - 139 69143426 27413 Abcb11 ABC16|Bsep|Lith1|PFIC2|PGY4|SPGP ATP-binding cassette, sub-family B (MDR/TAP), member 11 MGI:1351619 Mm.303187 2 2 C2|2 38.4 cM ABCB11 8647 NM_175512 + 36733 69181300 241452 Dhrs9 0 gaaagagataccagccagagcaa acatactcaaagcaggaacccaa 4 17 15 1.1.1.4.15.17 BCBC-5A-0 14094145 P202367 C1qtnf5; Mfrp ProximalPromoter P202367 ProximalPromoter Unique Tile chr9:43851663-43852649 (+) NM_145613;NM_147126;NM_001040631;NM_001040632; + 187 43852836 235312; 259172 C1qtnf5; Mfrp CTRP5; rd6 C1q and tumor necrosis factor related protein 5; membrane-type frizzled-related protein MGI:2385958; MGI:2385957 Mm.227110 9 9 A5.2|9 25.5 cM C1QTNF5; MFRP 114902; 83552 NM_153762 - 11397 43864046 213211 Rnf26 0 atgttcaaggtcatccttgccta acggaatggtccttaatccaact 4 17 16 1.1.1.4.16.17 BCBC-5A-0 14094164 P209427 1810008A18Rik ProximalPromoter P209427 ProximalPromoter Unique Tile chr10:76959668-76960639 (-) NM_133998 - 167 76959501 108707 1810008A18Rik AI303072 RIKEN cDNA 1810008A18 gene MGI:1916334 Mm.259547 10 10 C1 C21orf70 85395 NM_008404 + 25059 76985698 16414 Itgb2 0 attcccaggtcatctcaaaacaa ccaagagccagggaagtaaaact 4 17 17 1.1.1.4.17.17 BCBC-5A-0 14094183 P208915 Zfp275 ProximalPromoter P208915 ProximalPromoter Unique Tile chrX:69594203-69595202 (+) NM_031494 + 152 69595354 27081 Zfp275 5430431L06Rik|AI593314|DXBay20|DXHXS52|DXPas8 zinc finger protein 275 MGI:1350985 Mm.26595 X X A7.3|X 29.21 cM ZNF275 10838 0 ctcatcatggtttgtgtctggag ggtgggatagatgagactagggg 4 17 18 1.1.1.4.18.17 BCBC-5A-0 14094202 P001655 Blank P001655 Buffer Control Negative Blank 4 17 19 1.1.1.4.19.17 BCBC-5A-0 14093861 P100792 Ghr ProximalPromoter P100792 ProximalPromoter Unique Tile chr15:3533592-3534518 (-) NM_010284 - 361 3533231 14600 Ghr AA986417|GHBP|GHR/BP growth hormone receptor MGI:95708 Mm.3986 15 15 A1|15 4.6 cM GHR 2690 NM_028133 - 9148 3524444 112407 Egln3 0 agagagtggtgaagccgtctg ttcccccaaagaaggcagtat 4 18 1 1.1.1.4.1.18 BCBC-5A-0 14093880 P101542 Adrm1 ProximalPromoter P101542 ProximalPromoter Unique Tile chr2:180100567-180101570 (+) NM_019822 + 504 180101066 56436 Adrm1 1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110 adhesion regulating molecule 1 MGI:1929289 Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082; Mm.316654; Mm.379082 2 2 H4 ADRM1 11047 1 cgctcacccaataatgcaaat cgtttatctggggtgaccgta 4 18 2 1.1.1.4.2.18 BCBC-5A-0 14093899 P102393 Kcne1 ProximalPromoter P102393 ProximalPromoter Unique Tile chr16:92248152-92249134 (-) NM_008424 - 122 92248274 16509 Kcne1 Isk|MinK|nmf190 potassium voltage-gated channel, Isk-related subfamily, member 1 MGI:96673 Mm.299425 16 16 C4|16 64.4 cM KCNE1 3753 NM_029252 - 37885 92210267 75328 4930563D23Rik 1 atacaagatgtggagccaggtgt agcatctacttactgggtgcctg 4 18 3 1.1.1.4.3.18 BCBC-5A-0 14093918 P103515 Sort1 ProximalPromoter P103515 ProximalPromoter Unique Tile chr3:108410858-108411761 (+) NM_019972 + 426 108412187 20661 Sort1 2900053A11Rik|AI852375|Ntr3|Ntsr3 sortilin 1 MGI:1338015 Mm.157119 3 3 F3 SORT1 6272 NM_011967 + 25607 108385251 26442 Psma5 0 ctcagaaactggagggcttttct ctcctaaaaatttccttcggtgg 4 18 4 1.1.1.4.4.18 BCBC-5A-0 14093937 P104265 Ercc1 DistalPromoter P104265 DistalPromoter Unique Tile chr7:18500012-18501846 (+) NM_007948 + 1776 18503622 13870 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 MGI:95412 Mm.280913 7 7 A3|7 4.0 cM ERCC1 2067 NM_145822 - 16095 18517941 70333 Cd3eap 1 taggcgacacagtgcaacactaa agaagcagaagcaggcgatctat 4 18 5 1.1.1.4.5.18 BCBC-5A-0 14093956 P104811 Sptlc2 DistalPromoter P104811 DistalPromoter Unique Tile chr12:88278550-88280434 (-) NM_011479 - 1206 88277344 20773 Sptlc2 AI173915|LCB2|mKIAA0526 serine palmitoyltransferase, long chain base subunit 2 MGI:108074 Mm.565 12 12 E SPTLC2 9517 0 agaacaaacccctctgctcattc cttaacagcaagtggagcaagga 4 18 6 1.1.1.4.6.18 BCBC-5A-0 14093975 P107493 Ccl20 DistalPromoter P107493 DistalPromoter Unique Tile chr1:82992918-82994988 (+) NM_016960 + 817 82995805 20297 Ccl20 CKb4|LARC|MIP-3A|MIP-3[a]|MIP3A|ST38|Scya20|exodus-1 chemokine (C-C motif) ligand 20 MGI:1329031 Mm.116739 1 1 C5|1 52.0 cM CCL20 6364 NM_027725 + 43797 83038785 71227 4930563E19Rik 0 gaagagggtgtcagattccccta tttaatgcagagcctaagggagg 4 18 7 1.1.1.4.7.18 BCBC-5A-0 14093994 P106028 Pik3cg DistalPromoter P106028 DistalPromoter Unique Tile chr12:32794999-32796915 (-) NM_020272 - 1282 32793717 30955 Pik3cg 5830428L06Rik|PI3Kgamma|p110gamma phosphoinositide-3-kinase, catalytic, gamma polypeptide MGI:1353576 Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021; Mm.101369; Mm.404021 12 12 B PIK3CG 5294 0 gctactgcagatctctggggttt aggtccactctaaacatgggagc 4 18 8 1.1.1.4.8.18 BCBC-5A-0 14094013 P203620 Cnot10 ProximalPromoter P203620 ProximalPromoter Unique Tile chr9:114489015-114489914 (-) NM_153585 - 143 114488872 78893 Cnot10 2600001P13Rik|MGC37693 CCR4-NOT transcription complex, subunit 10 MGI:1926143 Mm.283708 9 9 F3 CNOT10 25904 NM_146229 + 47614 114537528 235661 Dync1li1 0 catgtgcccttggagactatttc cagaaggggaaggactttttgtt 4 18 9 1.1.1.4.9.18 BCBC-5A-0 14094032 P202825 Fbxw9 ProximalPromoter P202825 ProximalPromoter End Repeat Tile chr8:87949838-87950771 (+) NM_026791 + 138 87950633 68628 Fbxw9 1110017H11Rik|Fbw9|MGC7678 F-box and WD-40 domain protein 9 MGI:1915878 Mm.374815 8 8 C3 NM_001039514 + 11090 87961861 330817 Dhps 0 ccagggctatacagagaaaccct cccggaaatctttggattttaag 4 18 10 1.1.1.4.10.18 BCBC-5A-0 14094051 P201930 Toe1 ProximalPromoter P201930 ProximalPromoter Unique Tile chr4:116305752-116306702 (-) NM_026654 - 261 116305491 68276 Toe1 4930584N22Rik|4933424D16Rik|AI413517 target of EGR1, member 1 (nuclear) MGI:1915526 Mm.30534 4 4 C7 TOE1 114034 NM_133250 + 68 116305684 70603 Mutyh 1 tagttctggctgtcctggaactc tacagccgatcgtttcacttaca 4 18 11 1.1.1.4.11.18 BCBC-5A-0 14094070 P205197 Atp1b1 ProximalPromoter P205197 ProximalPromoter Unique Tile chr1:166294484-166295401 (-) NM_009721 - 184 166294668 11931 Atp1b1 Atpb|Atpb-1 ATPase, Na+/K+ transporting, beta 1 polypeptide MGI:88108 Mm.4550 1 1 H2.2|1 86.8 cM ATP1B1 481 0 aaggggtaagaccagtacgaagg agatgaatttcttccagctgcct 4 18 12 1.1.1.4.12.18 BCBC-5A-0 14094089 P204404 Fkbp1a ProximalPromoter P204404 ProximalPromoter Unique Tile chr2:151232728-151233779 (+) NM_008019 + 160 151233939 14225 Fkbp1a 12kDa|FKBP12|Fkbp|Fkbp1|mFKBP1|mFKBP12 FK506 binding protein 1a MGI:95541 Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214; Mm.278458; Mm.381214 2 2 G3 FKBP1A 2280 NM_145535 + 30293 151264072 228765 Sdcbp2 0 ctttttggttttgtttgtggagc gctttacttgcgcacacctaact 4 18 13 1.1.1.4.13.18 BCBC-5A-0 14094108 P206807 Gltp ProximalPromoter P206807 ProximalPromoter Unique Tile chr5:114952194-114953190 (-) NM_019821 - 260 114951934 56356 Gltp 1110001F24Rik|C76925|C77564 glycolipid transfer protein MGI:1929253 Mm.275766 5 5 F GLTP 51228 NM_029992 + 15682 114968872 77832 Tchp 1 attagggagtcttcccaaaggtg gtttacagctcaaaccctgacg 4 18 14 1.1.1.4.14.18 BCBC-5A-0 14094127 P206977 Noc3l ProximalPromoter P206977 ProximalPromoter Unique Tile chr19:38884264-38885210 (-) NM_021315 - 80 38884344 57753 Noc3l AF233884|Fad24 nucleolar complex associated 3 homolog (S. cerevisiae) MGI:1932610 Mm.86482 19 19 C3 NOC3L 64318 NM_145952 + 16512 38901722 209478 Tbc1d12 2 agatggatgtgctgggaatagaa taccacagacaagatcactcgga 4 18 15 1.1.1.4.15.18 BCBC-5A-0 14094146 P202391 6330406I15Rik ProximalPromoter P202391 ProximalPromoter Unique Tile chr5:149679378-149680304 (+) NM_027519 + 40 149680264 70717 6330406I15Rik MGC143803|MGC143804 RIKEN cDNA 6330406I15 gene MGI:1917967 Mm.252139 5 5 G3 FLJ14834 84935 0 cacccacattctcaggatttagc gagtaaatctgtggtctgtcccg 4 18 16 1.1.1.4.16.18 BCBC-5A-0 14094165 P209451 Pelo ProximalPromoter P209451 ProximalPromoter Unique Tile chr13:116211302-116212238 (-) NM_134058 - 354 116210948 105083 Pelo AA409897|AI852218 pelota homolog (Drosophila) MGI:2145154 Mm.317280 13 13 D2.2 PELO 53918 NM_001033228 - 10604 116222842 109700 Itga1 0 gatggtaaattagatgggagggg tatcattctgcaccttagcgtga 4 18 17 1.1.1.4.17.18 BCBC-5A-0 14094184 P208848 Trim2 ProximalPromoter P208848 ProximalPromoter Unique Tile chr3:84306720-84307765 (-) NM_030706 - 68 84306788 80890 Trim2 KIAA0517|mKIAA0517|narf tripartite motif protein 2 MGI:1933163 Mm.44876 3 3 F1 TRIM2 23321 0 ctcaattcagtgcttcactgtgg tccgaattcagaccaatcaatct 4 18 18 1.1.1.4.18.18 BCBC-5A-0 14094203 P001751 Cy3 Anchor P001751 Anchor Control Positive Cy3 Anchor 4 18 19 1.1.1.4.19.18 BCBC-5A-0 14093862 P100816 Hdac5 ProximalPromoter P100816 ProximalPromoter Unique Tile chr11:102041102-102042030 (-) NM_010412 - 95 102041007 15184 Hdac5 AI426555|Hdac4|mHDA1|mKIAA0600 histone deacetylase 5 MGI:1333784 Mm.22665 11 11 D HDAC5 10014 NM_153544 + 22941 102064971 217216 BC030867 0 ggtagggctctctgggagaaa gacaattttggagcgatcgag 4 19 1 1.1.1.4.1.19 BCBC-5A-0 14093881 P101566 Pdgfc ProximalPromoter P101566 ProximalPromoter Unique Tile chr3:81122218-81123194 (+) NM_019971 + 28 81123166 54635 Pdgfc 1110064L01Rik|AI647969|PDGF-C platelet-derived growth factor, C polypeptide MGI:1859631 Mm.331089 3 3 E3 PDGFC 56034 0 aagttacagccagggagagcc gagccctcttctgtgtctcca 4 19 2 1.1.1.4.2.19 BCBC-5A-0 14093900 P102699 Atp2a2 ProximalPromoter P102699 ProximalPromoter Unique Tile chr5:122762837-122763927 (-) NM_009722 - 325 122762512 11938 Atp2a2 9530097L16Rik|D5Wsu150e|KIAA4195|SERCA2|mKIAA4195 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 MGI:88110 Mm.227583 5 5 F|5 65.0 cM ATP2A2 488 2 tgtccatgaccttgaactcttga tgctctaatagcatttatccgcc 4 19 3 1.1.1.4.3.19 BCBC-5A-0 14093919 P103539 Park7 ProximalPromoter P103539 ProximalPromoter Unique Tile chr4:149754025-149755100 (-) NM_020569 - 375 149753650 57320 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 MGI:2135637 Mm.277349 4 4 E1 PARK7 11315 NM_011612 + 8917 149764017 21942 Tnfrsf9 0 gaagaaccagtccattccacaac tttcttgccccttactgtgacat 4 19 4 1.1.1.4.4.19 BCBC-5A-0 14093938 P104289 Gata5 DistalPromoter P104289 DistalPromoter Unique Tile chr2:180265418-180267442 (-) NM_008093 - 1337 180264081 14464 Gata5 - GATA binding protein 5 MGI:109497 Mm.388880 2 2 H4|2 106.0 cM GATA5 140628 NM_173031 - 46131 180219287 271887 BC066135 0 cctctgtttgcactcaaagccta atacttgggtctccagtcttggc 4 19 5 1.1.1.4.5.19 BCBC-5A-0 14093957 P104835 Trp53 DistalPromoter P104835 DistalPromoter Unique Tile chr11:69393133-69395232 (+) NM_011640 + 943 69396175 22059 Trp53 bbl|bfy|bhy|p53 transformation related protein 53 MGI:98834 Mm.222 11 11 B2-C|11 39.0 cM TP53 7157 NM_144824 - 287 69395519 216853 Wdr79 0 agaccaggtcatcctcaaactcc gagcgactcttagctccggatag 4 19 6 1.1.1.4.6.19 BCBC-5A-0 14093976 P107437 Nt5c DistalPromoter P107437 DistalPromoter Unique Tile chr11:115309018-115311175 (-) NM_015807 - 1111 115307907 50773 Nt5c Dnt|Dnt1|Umph-2|Umph2 5',3'-nucleotidase, cytosolic MGI:1354954 Mm.390379 11 11 E NT5C 30833 NM_177778 + 17252 115291766 276905 Armc7 0 ggacaggaaggttcaggttgact ctcttctcctttcctctgccatc 4 19 7 1.1.1.4.7.19 BCBC-5A-0 14093995 P106050 DistalPromoter P106050 DistalPromoter No Hits Tile 1 agggtttctatctccagtgtgcc gcaccttccttccaaggttttt 4 19 8 1.1.1.4.8.19 BCBC-5A-0 14094014 P203645 Lass5 ProximalPromoter P203645 ProximalPromoter Unique Tile chr15:99600730-99601642 (-) NM_028015 - 181 99600549 71949 Lass5 2310081H14Rik|AU045339|AW544927|Trh4 longevity assurance homolog 5 (S. cerevisiae) MGI:1919199 Mm.390821 15 15 F1 LASS5 91012 NM_023063 - 46464 99648106 65970 Lima1 1 attacagatggttgtgagccacc gtttctttcagcaggttcgacat 4 19 9 1.1.1.4.9.19 BCBC-5A-0 14094033 P202849 Glrb ProximalPromoter P202849 ProximalPromoter Unique Tile chr3:80999774-81000743 (-) NM_010298 - 230 80999544 14658 Glrb AI853901|Glyrb|spa|spastic glycine receptor, beta subunit MGI:95751 Mm.275639 3 3 E3-F1|3 36.0 cM GLRB 2743 1 agctttaaaacaaggcagctgtg aaataaaggagcagggctcaaga 4 19 10 1.1.1.4.10.19 BCBC-5A-0 14094052 P202433 ProximalPromoter P202433 ProximalPromoter Unique Tile chr2:20638821-20639875 (+) 0 tcccttttccacatcactgtttt ttaaaatgttcaggctggttggt 4 19 11 1.1.1.4.11.19 BCBC-5A-0 14094071 P205221 Serping1 ProximalPromoter P205221 ProximalPromoter Unique Tile chr2:84575918-84576930 (-) NM_009776 - 267 84575651 12258 Serping1 C1INH|C1nh serine (or cysteine) peptidase inhibitor, clade G, member 1 MGI:894696 Mm.38888 2 2 D SERPING1 710 NM_019949 + 22758 84599688 56791 Ube2l6 1 caagtctaactgggctcctcctt acagaacaataagccagaggctg 4 19 12 1.1.1.4.12.19 BCBC-5A-0 14094090 P204428 Gabra2 ProximalPromoter P204428 ProximalPromoter Unique Tile chr5:71374542-71375394 (-) NM_008066 - 368 71374910 14395 Gabra2 C630048P16Rik|Gabra-2|MGC140832 gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 2 MGI:95614 Mm.5304 5 5 C3.1|5 40.0 cM GABRA2 2555 1 ctcacaaacacacaccattcaca gacattggaattcgatcttggag 4 19 13 1.1.1.4.13.19 BCBC-5A-0 14094109 P206831 Tlx3 ProximalPromoter P206831 ProximalPromoter Unique Tile chr11:33103735-33104759 (-) NM_019916 - 276 33103459 27140 Tlx3 Hox11l2|Rnx|Tlx1l2 T-cell leukemia, homeobox 3 MGI:1351209 Mm.25362 11 - TLX3 30012 NM_008722 - 40659 33063076 18148 Npm1 2 agtcaggaaaccagaggaagagg tagggactgttccaaggtgacat 4 19 14 1.1.1.4.14.19 BCBC-5A-0 14094128 P206910 Tspan32 ProximalPromoter P206910 ProximalPromoter Unique Tile chr7:142814306-142815229 (+) NM_020286 + 149 142815080 27027 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 MGI:1350360 Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873; Mm.28172; Mm.403873 7 7 F5|7 69.0 cM TSPAN32 10077 NM_008554 - 35689 142778617 17173 Ascl2 2 ccactaggttacaagggttgctg tatagggtctgggcttcttaggc 4 19 15 1.1.1.4.15.19 BCBC-5A-0 14094147 P202415 E330009J07Rik ProximalPromoter P202415 ProximalPromoter Unique Tile chr6:40365957-40366993 (-) NM_175528 - 217 40365740 243780 E330009J07Rik AI841796|mKIAA1147 RIKEN cDNA E330009J07 gene MGI:2444256 Mm.333006 6 6 B1 NM_201370 + 5563 40372556 381759 BC052883 2 ctttgttgtctggccttcagagt ctctgcatctctgtatgtgggtg 4 19 16 1.1.1.4.16.19 BCBC-5A-0 14094166 P209475 Letmd1 ProximalPromoter P209475 ProximalPromoter Unique Tile chr15:100296387-100297328 (+) NM_134093 + 201 100297127 68614 Letmd1 1110019O13Rik|AI593524|BB130465|BB235638|HCCR-2|HCCR1|MCC-32|Mccr LETM1 domain containing 1 MGI:1915864 Mm.275272 15 15 F1 LETMD1 25875 NM_153407 - 25945 100323273 207785 BC035295 1 cacggagatgttctacagacgtg tggaagggcttctacatcaaaaa 4 19 17 1.1.1.4.17.19 BCBC-5A-0 14094185 P208872 Cd247 ProximalPromoter P208872 ProximalPromoter Unique Tile chr1:167624454-167625529 (+) NM_031162 + 87 167625442 12503 Cd247 AW552088|CD3-eta|CD3-zeta|Cd3|Cd3h|Cd3z|T3z|TCRk|Tcrz CD247 antigen MGI:88334 Mm.217308; Mm.417649; Mm.217308; Mm.417649; Mm.217308; Mm.417649; Mm.217308; Mm.417649; Mm.217308; Mm.417649; Mm.217308; Mm.417649; Mm.217308; Mm.417649; Mm.217308; Mm.417649; Mm.217308; Mm.417649; Mm.217308; Mm.417649; Mm.217308; Mm.417649; Mm.217308; Mm.417649; Mm.217308; Mm.417649 1 1 G-H|1 87.2 cM CD247 919 NM_011804 + 24000 167600454 433375 Creg1 0 gctctctgcctccagatttgata gcgagaacagacactttccactt 4 19 18 1.1.1.4.18.19 BCBC-5A-0 14094204 P001847 Cy3 Anchor P001847 Anchor Control Positive Cy3 Anchor 4 19 19 1.1.1.4.19.19 BCBC-5A-0 14094205 P100300 Jak2 ProximalPromoter P100300 ProximalPromoter Unique Tile chr19:29316850-29317774 (+) NM_008413 + 663 29318437 16452 Jak2 AI504024|C81284|Fd17 Janus kinase 2 MGI:96629 Mm.275839; Mm.393199; Mm.275839; Mm.393199; Mm.275839; Mm.393199; Mm.275839; Mm.393199; Mm.275839; Mm.393199; Mm.275839; Mm.393199; Mm.275839; Mm.393199; Mm.275839; Mm.393199; Mm.275839; Mm.393199; Mm.275839; Mm.393199 19 19 C1|19 24.0 cM JAK2 3717 1 cacatttctgctcaaatgcca tttctgctctgcctcagcttc 5 1 1 1.1.2.1.1.1 BCBC-5A-0 14094224 P101140 Cops3 ProximalPromoter P101140 ProximalPromoter Unique Tile chr11:59656131-59657136 (-) NM_011991 - 169 59655962 26572 Cops3 Csn3|Sgn3 COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana) MGI:1349409 Mm.40 11 11 B2 COPS3 8533 NM_134029 + 7131 59664267 103850 Nt5m 0 cgtttgatgtgccatgtgact cctcgcctttcattgtagtgc 5 1 2 1.1.2.1.2.1 BCBC-5A-0 14094243 P101890 2310042G06Rik ProximalPromoter P101890 ProximalPromoter Unique Tile chr2:174115784-174116816 (-) NM_025531 - 96 174115880 66390 2310042G06Rik AA407013 RIKEN cDNA 2310042G06 gene MGI:1913640 Mm.182294 2 2 H4 C20orf45 51012 NM_025983 - 8754 174107030 67126 Atp5e 1 aatagaaccacatgccatccg ccgaagtccagatcttcatgg 5 1 3 1.1.2.1.3.1 BCBC-5A-0 14094262 P103023 Rabggtb ProximalPromoter P103023 ProximalPromoter Unique Tile chr3:153849749-153850747 (-) NM_011231 - 304 153849445 19352 Rabggtb - RAB geranylgeranyl transferase, b subunit MGI:99537 Mm.277831 3 3 H3|3 76.5 cM RABGGTB 5876 NM_031870 - 6225 153843524 55993 Msh4 1 aatcttcgagggtattggggata cacccaataagtaggtcaaagcg 5 1 4 1.1.2.1.4.1 BCBC-5A-0 14094281 P103773 Ndufb3 ProximalPromoter P103773 ProximalPromoter Unique Tile chr1:58529974-58531034 (+) NM_025597 + 110 58531144 66495 Ndufb3 2700033I16Rik|AI415450 NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 MGI:1913745 Mm.2033 1 1 C1.3 NDUFB3 4709 NM_172513 - 247 58530787 213056 BC049806 1 aggctctccacttttctgaaggt gattatttcccacactttgcagc 5 1 5 1.1.2.1.5.1 BCBC-5A-0 14094300 P106734 Gnai2 DistalPromoter P106734 DistalPromoter Unique Tile chr9:107494758-107496881 (-) NM_008138 - 1315 107493443 14678 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein, alpha inhibiting 2 MGI:95772 Mm.196464 9 9 F1|9 59.0 cM GNAI2 2771 NM_023805 - 28594 107525475 76257 Slc38a3 0 gccaagtcaagccgaattagagt gagatctgagaccctcttctggg 5 1 6 1.1.2.1.6.1 BCBC-5A-0 14094319 P107223 Hmgb1 DistalPromoter P107223 DistalPromoter Unique Tile chr5:149364284-149366438 (-) NM_010439 - 898 149363386 15289 Hmgb1 Hmg1|MGC103168|MGC103169|MGC117896|MGC117897 high mobility group box 1 MGI:96113 Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345; Mm.207047; Mm.313345 5 5 G3|5 83.0 cM HMGB1 3146 0 acacacacacacacacacacgtc ttttctgtgactcggtgtggatt 5 1 7 1.1.2.1.7.1 BCBC-5A-0 14094338 P107556 DistalPromoter P107556 DistalPromoter Unique Tile chr4:69737043-69739225 (-) 0 tttcaaagtttcctaggggtcca acgaggaagcaacttcacatcac 5 1 8 1.1.2.1.8.1 BCBC-5A-0 14094357 P104151 Prdx3 DistalPromoter P104151 DistalPromoter Unique Tile chr19:60930760-60932820 (-) NM_007452 - 1583 60929177 11757 Prdx3 AW822249|Aop1|D0Tohi1|Ef2l|Mer5|Prx3|SP22|TDXM peroxiredoxin 3 MGI:88034 Mm.29821 19 19 D3|19 50.0 cM PRDX3 10935 NM_018869 + 12318 60945138 14773 Gprk5 2 ttgtaaagagcttgtcagccagc ctgggatttgaactcctgacctt 5 1 9 1.1.2.1.9.1 BCBC-5A-0 14094376 P203095 D15Mgi27 ProximalPromoter P203095 ProximalPromoter Unique Tile chr15:102106345-102107335 (+) NM_134100 + 154 102107489 106073 D15Mgi27 - DNA Segment, Chr 15, Mouse Genome Informatics 27 Mm.287740 15 15 F3 NM_001004171 + 7749 102098596 432988 LOC432988 0 tggagctacaagcaattgtgaaa tcgtccggaatgaaagtgtattt 5 1 10 1.1.2.1.10.1 BCBC-5A-0 14094395 P203174 Glt28d1 ProximalPromoter P203174 ProximalPromoter Unique Tile chrX:139563518-139564432 (+) NM_026247 + 42 139564390 67574 Glt28d1 2810046O15Rik|4833435D08Rik|MDS031 glycosyltransferase 28 domain containing 1 MGI:1914824 Mm.249084 X X F2 GLT28D1 55849 0 aaccaatcccaagaacccatagt gacagtcacaaacgctctcttca 5 1 11 1.1.2.1.11.1 BCBC-5A-0 14094414 P204023 AA536749 ProximalPromoter P204023 ProximalPromoter Unique Tile chr11:59477563-59478507 (+) NM_201245;NM_012027; + 219 59478726 26936 AA536749 9530046C02|AI647711|C76423|MGC67316|RIP3|Rhoip3|mKIAA0864|p116Rip expressed sequence AA536749 MGI:1349438 Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074; Mm.2402; Mm.392074 11 11 B1.3 M-RIP 23164 NM_001011740 + 48403 59429160 257886 Olfr225 0 aaacacaggctgacttctggaac gaactttcaggtttggtggactg 5 1 12 1.1.2.1.12.1 BCBC-5A-0 14094433 P202644 Pdcl3 ProximalPromoter P202644 ProximalPromoter Unique Tile chr1:38931080-38932101 (+) NM_026850 + 248 38932349 68833 Pdcl3 1110061A19Rik|C80025|Viaf1 phosducin-like 3 MGI:1916083 Mm.28121 1 1 B PDCL3 79031 NM_001011684 + 47386 38883694 433292 Nms 0 tctgaagcacacctgctgtaaaa gacccgaggtaagcataggttct 5 1 13 1.1.2.1.13.1 BCBC-5A-0 14094452 P205044 Tert ProximalPromoter P205044 ProximalPromoter Unique Tile chr13:74091849-74092772 (+) NM_009354 + 230 74093002 21752 Tert EST2|TCS1|TP2|TRT telomerase reverse transcriptase MGI:1202709 Mm.10109 13 13 C1|13 43.0 cM TERT 7015 NM_146047 + 21547 74070302 218335 C130052I12Rik 0 caaacccctcaaaaagactgatg gatgtgttggagtaacgaaaggg 5 1 14 1.1.2.1.14.1 BCBC-5A-0 14094471 P202975 ProximalPromoter P202975 ProximalPromoter Unique Tile chr5:62900481-62901385 (-) 0 ttcctgctgaccctctgtctaac gcacagtacattagggaaggtgg 5 1 15 1.1.2.1.15.1 BCBC-5A-0 14094490 P206262 Trhr ProximalPromoter P206262 ProximalPromoter Unique Tile chr15:44025245-44026234 (+) NM_013696 + 72 44026306 22045 Trhr MGC124380|MGC124381 thyrotropin releasing hormone receptor MGI:98824 Mm.309350 15 15 B3.2|15 24.7 cM TRHR 7201 0 acaaaagcatgcaaacagtagca tgtcaaaccatagatcgtccctt 5 1 16 1.1.2.1.16.1 BCBC-5A-0 14094509 P200888 G630039H03Rik ProximalPromoter P200888 ProximalPromoter Unique Tile chr16:34609091-34610130 (+) NM_172824 + 326 34610456 239839 G630039H03Rik - RIKEN cDNA G630039H03 gene MGI:2443448 Mm.272045 16 16 B3 NM_030744 + 38134 34570957 76378 Ropn1 0 gtactacatgctggggaccagag gctggatttcagaagctttgtgt 5 1 17 1.1.2.1.17.1 BCBC-5A-0 14094528 P210193 Rdh9 ProximalPromoter P210193 ProximalPromoter Unique Tile chr10:127178482-127179406 (+) NM_153133 + 53 127179353 103142 Rdh9 AI121090|Crad3 retinol dehydrogenase 9 MGI:2143528 Mm.425648 10 10 D3 NM_080436 + 15724 127162758 107605 Rdh1 0 tattggggcacttcctgatagaa gatactcggtgtcaaaatgagcc 5 1 18 1.1.2.1.18.1 BCBC-5A-0 14094547 P209396 5830446M03Rik ProximalPromoter P209396 ProximalPromoter Unique Tile chr6:87804652-87805672 (-) NM_133934 - 258 87804394 57905 5830446M03Rik AI181014|AU020769 RIKEN cDNA 5830446M03 gene MGI:1923310 Mm.241546; Mm.400565; Mm.241546; Mm.400565; Mm.241546; Mm.400565; Mm.241546; Mm.400565; Mm.241546; Mm.400565; Mm.241546; Mm.400565; Mm.241546; Mm.400565; Mm.241546; Mm.400565 6 6 D2 KIAA1160 57461 NM_013493 - 10964 87816636 12785 Cnbp 0 tatgcacggtggtaacattcttg tgacagcagatgacctttttgaa 5 1 19 1.1.2.1.19.1 BCBC-5A-0 14094206 P100324 Smad4 ProximalPromoter P100324 ProximalPromoter Unique Tile chr18:73803780-73804732 (-) NM_008540 - 25330 73829110 17128 Smad4 D18Wsu70e|DPC4|Madh4 MAD homolog 4 (Drosophila) MGI:894293 Mm.100399 18 18 E2|18 48.0 cM SMAD4 4089 0 ctcccttcctccttttctcca caagttgtgatgacccccaat 5 2 1 1.1.2.1.1.2 BCBC-5A-0 14094225 P101074 Wars ProximalPromoter P101074 ProximalPromoter Unique Tile chr12:109336636-109337667 (-) NM_011710 - 4368 109341004 22375 Wars WRS tryptophanyl-tRNA synthetase MGI:104630 Mm.38433 12 12 F2 WARS 7453 NM_001012310 + 37701 109298935 104910 AI132487 0 agtgccctccaggtagctttc cgaggtgatgtttgttcccat 5 2 2 1.1.2.1.2.2 BCBC-5A-0 14094244 P101914 Pomp ProximalPromoter P101914 ProximalPromoter Unique Tile chr5:148169527-148170504 (+) NM_025624 + 472 148170976 66537 Pomp 2510048O06Rik proteasome maturation protein MGI:1913787 Mm.332855 5 5 G3 POMP 51371 NM_027872 - 34647 148205151 71706 1200006F02Rik 0 gctttgagcctcctgatgaga gccaccggttcgttcataata 5 2 3 1.1.2.1.3.2 BCBC-5A-0 14094263 P103047 Sgk ProximalPromoter P103047 ProximalPromoter Unique Tile chr10:21683278-21684284 (+) NM_011361 + 164 21684120 20393 Sgk Sgk1 serum/glucocorticoid regulated kinase MGI:1340062 Mm.28405 10 10 A3 SGK 6446 1 gggatttttcagccttgcttagt ggctctcctacacacacaagtcc 5 2 4 1.1.2.1.4.2 BCBC-5A-0 14094282 P103797 Eif4e3 ProximalPromoter P103797 ProximalPromoter Unique Tile chr6:99632637-99633699 (-) NM_025829 - 403 99632234 66892 Eif4e3 1300018P11Rik|AI451927|eIF4E-3 eukaryotic translation initiation factor 4E member 3 MGI:1914142 Mm.32889 6 6 D3 EIF4E3 317649 NM_008158 + 24442 99658141 14761 Gpr27 0 gattgtcttgggagaaggtgaga gccgaacagataaagagactcca 5 2 5 1.1.2.1.5.2 BCBC-5A-0 14094301 P106834 Pea15 DistalPromoter P106834 DistalPromoter Unique Tile chr1:174036288-174038331 (-) NM_011063 - 7066 174043354 18611 Pea15 Mat1|PEA-15|Pkcs15 phosphoprotein enriched in astrocytes 15 MGI:104799 Mm.544 1 1 H3|1 93.8 cM PEA15 8682 NM_009813 - 18177 174056508 12372 Casq1 0 gctaacctctgagccatctctcc gtatggggagaaatcccagacac 5 2 6 1.1.2.1.6.2 BCBC-5A-0 14094320 P107245 Ier2 DistalPromoter P107245 DistalPromoter Unique Tile chr8:87554286-87555867 (-) NM_010499 - 1333 87552953 15936 Ier2 AI317238|ch1|pip92 immediate early response 2 MGI:104815 Mm.399 8 8 C3|8 38.4 cM IER2 9592 NM_025788 - 22073 87577940 66830 Btbd14b 0 tgagtcaagaatcaaggccagag cagccctcaggagcctaactaag 5 2 7 1.1.2.1.7.2 BCBC-5A-0 14094339 P105779 Psmc4 DistalPromoter P105779 DistalPromoter Unique Tile chr7:27759771-27761928 (-) NM_011874 - 968 27758803 23996 Psmc4 CIP21|MGC103150|MIP224 proteasome (prosome, macropain) 26S subunit, ATPase, 4 MGI:1346093 Mm.29582 7 7 A3|7 10.0 cM PSMC4 5704 0 tggttgcttggtctgggtagtaa gaaaagggcataggaatctgtgg 5 2 8 1.1.2.1.8.2 BCBC-5A-0 14094358 P104175 Zfp36l1 DistalPromoter P104175 DistalPromoter Unique Tile chr12:81033105-81035174 (-) NM_007564 - 1252 81031853 12192 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 MGI:107946 Mm.235132 12 12 C3 ZFP36L1 677 1 gaaccaatactcgaatcccgaac gggtaccaagcaataagacccac 5 2 9 1.1.2.1.9.2 BCBC-5A-0 14094377 P203029 Kcnt1 ProximalPromoter P203029 ProximalPromoter Unique Tile chr2:25698631-25699602 (+) NM_175462 + 267 25699869 227632 Kcnt1 C030030G16Rik|Slack|mKIAA1422|slo2 potassium channel, subfamily T, member 1 MGI:1924627 Mm.119462 2 2 A3 KCNT1 57582 NM_001001714 - 29374 25669257 227631 Sohlh1 0 gtgagtgtaggcctgtgtgtgtc acagctcatgaggctcttggtag 5 2 10 1.1.2.1.10.2 BCBC-5A-0 14094396 P203198 Gpr157 ProximalPromoter P203198 ProximalPromoter Unique Tile chr4:148930098-148931010 (+) NM_177366 + 292 148931302 269604 Gpr157 F730108M23Rik G protein-coupled receptor 157 MGI:2442046 Mm.219307 4 4 E2 GPR157 80045 NM_019741 + 32133 148963143 56485 Slc2a5 0 aaatttatgggtatgggggtacg ctctttcagcctcaagctcaatc 5 2 11 1.1.2.1.11.2 BCBC-5A-0 14094415 P204047 Nploc4 ProximalPromoter P204047 ProximalPromoter Unique Tile chr11:120253953-120254998 (-) NM_199469 - 195 120253758 217365 Nploc4 AK129375|KIAA1499|Npl4|mKIAA1499 nuclear protein localization 4 homolog (S. cerevisiae) MGI:2679787 Mm.309520 11 11 E2 NPLOC4 55666 NM_145363 + 3784 120258782 208634 Tspan10 2 catgagacgaggatagaaatggg attcctgaaagttcgagcaatga 5 2 12 1.1.2.1.12.2 BCBC-5A-0 14094434 P202668 Gloxd1 ProximalPromoter P202668 ProximalPromoter Unique Tile chr4:116319304-116320321 (-) NM_146256 - 49 116319255 242642 Gloxd1 A830048M07Rik|BC034099|MGC31514 glyoxalase domain containing 1 MGI:2444646 Mm.279897 4 4 D1 GLOXD1 84842 NM_133250 + 7048 116312256 70603 Mutyh 0 agtctggcttgcttcttctctca ggtgtatccgaagatcgtgtttc 5 2 13 1.1.2.1.13.2 BCBC-5A-0 14094453 P205842 Sin3a ProximalPromoter P205842 ProximalPromoter Unique Tile chr9:56878493-56879399 (+) NM_011378 + 4774 56874625 20466 Sin3a AW553200|KIAA4126|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) MGI:107157 Mm.15755 9 9 B|9 30.0 cM SIN3A 25942 NM_028636 + 49514 56928913 73744 Man2c1 0 agcacttgctcctagagcttgaa ggcatctgcatccacatgtataa 5 2 14 1.1.2.1.14.2 BCBC-5A-0 14094472 P202999 Gna14 ProximalPromoter P202999 ProximalPromoter Unique Tile chr19:16501697-16502777 (+) NM_008137 + 3 16502780 14675 Gna14 AU023208 guanine nucleotide binding protein, alpha 14 MGI:95769 Mm.313181 19 19 A-B|19 9.0 cM GNA14 9630 0 tgatcaaatgaatgggaacactg cacacttggggtttctagactgg 5 2 15 1.1.2.1.15.2 BCBC-5A-0 14094491 P206286 Dnajb9 ProximalPromoter P206286 ProximalPromoter Unique Tile chr12:45080381-45081423 (-) NM_013760 - 27 45080354 27362 Dnajb9 AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7 DnaJ (Hsp40) homolog, subfamily B, member 9 MGI:1351618 Mm.27432; Mm.407411; Mm.27432; Mm.407411; Mm.27432; Mm.407411; Mm.27432; Mm.407411; Mm.27432; Mm.407411; Mm.27432; Mm.407411; Mm.27432; Mm.407411; Mm.27432; Mm.407411; Mm.27432; Mm.407411; Mm.27432; Mm.407411; Mm.27432; Mm.407411 12 12 B1 DNAJB9 4189 0 cttgccttggcttctgaataaaa gcttatagagccgacctacacga 5 2 16 1.1.2.1.16.2 BCBC-5A-0 14094510 P200912 4932409I22Rik ProximalPromoter P200912 ProximalPromoter Unique Tile chr10:79017275-79017960 (-) NM_198614 - 146 79017129 237397 4932409I22Rik Gm238|MGC86088 RIKEN cDNA 4932409I22 gene MGI:2685084 Mm.334207 10 10 C1 KIAA1957 126567 NM_011583;NM_199226; - 27010 78990265 21830 Theg 0 ataaatgtaggcccatggaaggt agacagtctcctggttcaagctg 5 2 17 1.1.2.1.17.2 BCBC-5A-0 14094529 P210126 D11Ertd730e ProximalPromoter P210126 ProximalPromoter Unique Tile chr11:43276171-43277263 (+) NM_198936;NM_148673; + 110 43277153 193116 D11Ertd730e AU018913|D3Bwg0878e|MGC31026 DNA segment, Chr 11, ERATO Doi 730, expressed MGI:2385598 Mm.28200 11 11 B1.1 SLU7 10569 NM_013917 - 6497 43269674 30939 Pttg1 0 cggtttggtactcattctggttc aatctcagaaccccaacttaccc 5 2 18 1.1.2.1.18.2 BCBC-5A-0 14094548 P209421 Cd276 ProximalPromoter P209421 ProximalPromoter Unique Tile chr9:58353456-58354537 (-) NM_133983 - 14379 58339077 102657 Cd276 6030411F23Rik|AU016588|B7RP-2|B7h3 CD276 antigen MGI:2183926 Mm.5356 9 9 B CD276 80381 NM_009145 + 26008 58380545 20320 Nptn 0 tcagcacacaaattcaaggacat gtactctgaggaggaggaggagg 5 2 19 1.1.2.1.19.2 BCBC-5A-0 14094207 P100348 Laptm4a ProximalPromoter P100348 ProximalPromoter Unique Tile chr12:8946595-8947534 (+) NM_008640 + 220 8947314 17775 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A MGI:108017 Mm.30071; Mm.401534; Mm.30071; Mm.401534; Mm.30071; Mm.401534; Mm.30071; Mm.401534; Mm.30071; Mm.401534; Mm.30071; Mm.401534; Mm.30071; Mm.401534; Mm.30071; Mm.401534; Mm.30071; Mm.401534; Mm.30071; Mm.401534; Mm.30071; Mm.401534; Mm.30071; Mm.401534; Mm.30071; Mm.401534 12 12 A1.1 LAPTM4A 9741 NM_010770 + 26469 8974003 17182 Matn3 0 gaatcctcacgattgctttgc gatttctgtccttcccccatc 5 3 1 1.1.2.1.1.3 BCBC-5A-0 14094226 P101098 Hax1 ProximalPromoter P101098 ProximalPromoter Unique Tile chr3:90084645-90085634 (-) NM_011826 - 32 90084613 23897 Hax1 HAX-1|Hs1bp1|SIG-111|Silg111|mHAX-1s HCLS1 associated X-1 Mm.256035 3 3 F2 NM_153489;NM_028475; - 48194 90133828 74383 Ubap2l 0 acaccctgccttgcctatttt tcgtaaaagtcgtaagccgga 5 3 2 1.1.2.1.2.3 BCBC-5A-0 14094245 P102231 Cyp2b19 ProximalPromoter P102231 ProximalPromoter Unique Tile chr7:26465103-26466085 (+) NM_007814 + 139 26465946 13090 Cyp2b19 - cytochrome P450, family 2, subfamily b, polypeptide 19 MGI:107303 Mm.14098 7 7 A3|7 7.3 cM 0 agggactcttatggagagttggg tctgcaagaggttacccaagaag 5 3 3 1.1.2.1.3.3 BCBC-5A-0 14094264 P103071 Supt4h1 ProximalPromoter P103071 ProximalPromoter Unique Tile chr11:87552348-87553326 (+) NM_009296 + 432 87553758 20922 Supt4h1 AL022777|Supt4h suppressor of Ty 4 homolog 1 (S. cerevisiae) MGI:107416 Mm.622 11 11 C|11 49.0 cM SUPT4H1 6827 NM_011509 + 468 87553794 20923 Supt4h2 0 cttatatgtggtgggtcctgagc tcctaagttggcctctgagtacg 5 3 4 1.1.2.1.4.3 BCBC-5A-0 14094283 P103821 Psmc6 ProximalPromoter P103821 ProximalPromoter Unique Tile chr14:44250860-44251846 (+) NM_025959 + 146 44251700 67089 Psmc6 2300001E01Rik|AI451058|MGC151129 proteasome (prosome, macropain) 26S subunit, ATPase, 6 MGI:1914339 Mm.18472 14 14 C1 PSMC6 5706 NM_015774 - 10456 44240404 50527 Ero1l 2 cggttcccagtatccacatagag ggtccaggcactagagagtgtgt 5 3 5 1.1.2.1.5.3 BCBC-5A-0 14094302 P106856 Nin DistalPromoter P106856 DistalPromoter Unique Tile chr12:71032042-71034207 (-) NM_008697 - 1479 71030563 18080 Nin AI385615|mKIAA1565 ninein MGI:105108 Mm.244047 12 - NIN 51199 0 aaacacttcctcggaagaccaag ataacgccattcatcaaccctct 5 3 6 1.1.2.1.6.3 BCBC-5A-0 14094321 P107188 Fmo5 DistalPromoter P107188 DistalPromoter Unique Tile chr3:97711683-97713529 (+) NM_010232 + 750 97714279 14263 Fmo5 5033418D19Rik|AI195026 flavin containing monooxygenase 5 MGI:1310004 Mm.385180 3 3 F2.2 FMO5 2330 NM_026539 - 16075 97695608 68058 Chd1l 0 ttctgtttccatgatctgtccgt tcagggttcagtatctcccttcc 5 3 7 1.1.2.1.7.3 BCBC-5A-0 14094340 P105801 Adh4 DistalPromoter P105801 DistalPromoter Unique Tile chr3:138349744-138351905 (+) NM_011996 + 990 138352895 26876 Adh4 Adh2 alcohol dehydrogenase 4 (class II), pi polypeptide MGI:1349472 Mm.158750 3 3 H2 ADH4 127 NM_007410 + 28645 138380550 11532 Adh5 0 caacttggcaagcaatttacagg gtggacagctcctgtgcctacta 5 3 8 1.1.2.1.8.3 BCBC-5A-0 14094359 P104199 2900006K08Rik DistalPromoter P104199 DistalPromoter Unique Tile chr12:85296820-85298983 (-) NM_028377 + 122 85298861 72873 2900006K08Rik AI427784 RIKEN cDNA 2900006K08 gene MGI:1920123 Mm.24846 12 12 D1 C14orf45 80127 NM_001026214;NM_007647; - 206 85298777 12499 Entpd5 1 tttgcctttcctcttgtctttcc acatgcctttaatcccagcattt 5 3 9 1.1.2.1.9.3 BCBC-5A-0 14094378 P203053 D930048N14Rik ProximalPromoter P203053 ProximalPromoter Unique Tile chr11:51493253-51494165 (+) NM_175289 + 213 51494378 97775 D930048N14Rik AI315703|R75254 RIKEN cDNA D930048N14 gene MGI:2144709 Mm.220299 11 11 B1.3 NM_145974 - 44 51494209 212706 C330016O10Rik 0 cctggggaaagaggtaagaagaa gaagagaaaggttcgagaccgag 5 3 10 1.1.2.1.10.3 BCBC-5A-0 14094397 P200109 1500002O20Rik ProximalPromoter P200109 ProximalPromoter Unique Tile chr7:24107640-24108540 (+) NM_028047 + 68 24108472 71997 1500002O20Rik AI429693|N28092 RIKEN cDNA 1500002O20 gene MGI:1919247 Mm.150977 7 7 A3 FLJ12886 56006 NM_008433 + 28567 24079073 16534 Kcnn4 1 ccagggctatacagagaaaccct aaggtcacaagccagagaatgag 5 3 11 1.1.2.1.11.3 BCBC-5A-0 14094416 P204071 Six2 ProximalPromoter P204071 ProximalPromoter Unique Tile chr17:85596707-85597762 (-) NM_011380 - 127 85596580 20472 Six2 - sine oculis-related homeobox 2 homolog (Drosophila) MGI:102778 Mm.5039 17 17 E4|17 45.5 cM SIX2 10736 1 atccagtctcttctgtgcacctc agtcgagtcaaattattcgccat 5 3 12 1.1.2.1.12.3 BCBC-5A-0 14094435 P202692 9830107B12Rik ProximalPromoter P202692 ProximalPromoter Duplication Tile chr17:47609707-47610788 (-) NM_177824 - 249 47609458 328829 9830107B12Rik - RIKEN cDNA 9830107B12 gene MGI:3608415 Mm.391001 17 17 C NM_178796 - 19621 47630409 328830 A530064D06Rik 0 cacagttgtgcactctcccatag ggaaaggagatgggcatttattc 5 3 13 1.1.2.1.13.3 BCBC-5A-0 14094454 P205866 Sox2 ProximalPromoter P205866 ProximalPromoter Unique Tile chr3:34840706-34841657 (+) NM_011443 + 27 34841684 20674 Sox2 Sox-2|lcc|ysb SRY-box containing gene 2 MGI:98364 Mm.4541; Mm.65396; Mm.4541; Mm.65396; Mm.4541; Mm.65396; Mm.4541; Mm.65396; Mm.4541; Mm.65396 3 3 A2-B|3 15.0 cM SOX2 6657 1 cttgtgtcagggttgggagttag tcccagccctagtcttaaagagg 5 3 14 1.1.2.1.14.3 BCBC-5A-0 14094473 P202933 Gjb3 ProximalPromoter P202933 ProximalPromoter Unique Tile chr4:126832982-126833885 (-) NM_008126 - 149 126832833 14620 Gjb3 Cnx31|Cx31|D4Wsu144e|Gjb-3 gap junction membrane channel protein beta 3 MGI:95721 Mm.90003 4 4 D2.2|4 58.0 cM GJB3 2707 NM_008120 - 16700 126816282 14612 Gja4 0 atcagagatctttcctttgcgtg atgcaagttctaatccaggagca 5 3 15 1.1.2.1.15.3 BCBC-5A-0 14094492 P206310 Plk3 ProximalPromoter P206310 ProximalPromoter Unique Tile chr4:116632173-116633100 (-) NM_013807 - 289 116631884 12795 Plk3 Cnk|Fnk|PRK polo-like kinase 3 (Drosophila) MGI:109604 Mm.259022 4 4 D2.1 PLK3 1263 NM_175030 + 7172 116625001 242646 4833401D15Rik 2 ggcagagacaggtaggaagtcaa ccccttcatccttagaatgtgtg 5 3 16 1.1.2.1.16.3 BCBC-5A-0 14094511 P200936 Fabp9 ProximalPromoter P200936 ProximalPromoter Unique Tile chr3:10179896-10180926 (-) NM_011598 - 142 10179754 21884 Fabp9 1700007P10Rik|Perf|Perf15|Tlbp fatty acid binding protein 9, testis MGI:1194881 Mm.26654 3 3 A2 NM_024406 - 8004 10188930 11770 Fabp4 0 tacagcgagctttaacttcctgg gcaaagtttaattcagggagcct 5 3 17 1.1.2.1.17.3 BCBC-5A-0 14094530 P210151 Plcd3 ProximalPromoter P210151 ProximalPromoter Unique Tile chr11:102917869-102918784 (-) NM_152813 - 177 102917692 72469 Plcd3 2610205J15Rik|mKIAA1964 phospholipase C, delta 3 MGI:107451 Mm.264743 11 11 E1|11 63.0 cM PLCD3 113026 NM_025988 + 6 102917863 67131 Acbd4 0 aaggacactggagctgagttttg gcccctactagtgagtcggtctt 5 3 18 1.1.2.1.18.3 BCBC-5A-0 14094549 P207403 Plekhf1 ProximalPromoter P207403 ProximalPromoter Unique Tile chr7:37937215-37938166 (-) NM_024413 - 168 37937047 72287 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 MGI:1919537 Mm.333798 7 7 B1 PLEKHF1 79156 NM_025390 - 42270 37980436 66161 Pop4 1 atgtgtcttctccccatctgaaa taattaaaccgctggaccgtaaa 5 3 19 1.1.2.1.19.3 BCBC-5A-0 14094208 P100372 Notch3 ProximalPromoter P100372 ProximalPromoter Unique Tile chr17:31895901-31896803 (-) NM_008716 - 343 31895558 18131 Notch3 AW229011 Notch gene homolog 3 (Drosophila) MGI:99460 Mm.4945 17 17 B1|17 20.0 cM NOTCH3 4854 NM_001033163 - 21366 31918169 71932 Abhd9 0 gagaccgtgtgaaccatgaca ctgggtgtagagaggccaatg 5 4 1 1.1.2.1.1.4 BCBC-5A-0 14094227 P101122 Ing1 ProximalPromoter P101122 ProximalPromoter Unique Tile chr8:11560218-11561176 (+) NM_011919 + 4683 11556493 26356 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1 inhibitor of growth family, member 1 MGI:1349481 Mm.25709 8 8 A1.1 ING1 3621 0 tggcgtcagtacaaagggtct gccacaattgccacaatttct 5 4 2 1.1.2.1.2.4 BCBC-5A-0 14094246 P102255 Ecm1 ProximalPromoter P102255 ProximalPromoter Unique Tile chr3:95825332-95826371 (-) NM_007899 - 365 95824967 13601 Ecm1 AI663821|p85 extracellular matrix protein 1 MGI:103060 Mm.3433 3 3 F2.1|3 45.4 cM ECM1 1893 NM_027931 - 13896 95840267 71807 Tarsl1 0 cactgtgggctgtatgtagcaag ctgggaaagagggagtaaagcat 5 4 3 1.1.2.1.3.4 BCBC-5A-0 14094265 P103005 Pltp ProximalPromoter P103005 ProximalPromoter Unique Tile chr2:164549250-164550230 (-) NM_011125 - 337 164548913 18830 Pltp OD107 phospholipid transfer protein MGI:103151 Mm.6105 2 2 H3|2 93.0 cM PLTP 5360 NM_146129 + 20342 164570572 228866 F730014I05Rik 0 aaccttacactaaacctggggga tcttttctctcacaaccgtctcc 5 4 4 1.1.2.1.4.4 BCBC-5A-0 14094284 P103845 Armcx2 ProximalPromoter P103845 ProximalPromoter Unique Tile chrX:130155677-130156635 (-) NM_026139 - 319 130155358 67416 Armcx2 3230401N03Rik|AI043003|ALEX2 armadillo repeat containing, X-linked 2 MGI:1914666 Mm.285969 X X E3 ARMCX2 9823 0 ggtaaggggataaaggcattcac cctcgagtttttcctgggttact 5 4 5 1.1.2.1.5.4 BCBC-5A-0 14094303 P106877 Pde6d DistalPromoter P106877 DistalPromoter Unique Tile chr1:88414730-88416927 (-) NM_008801 - 1058 88413672 18582 Pde6d AI841218 phosphodiesterase 6D, cGMP-specific, rod, delta MGI:1270843 Mm.12925 1 1 D PDE6D 5147 NM_172974 + 1343 88418270 26895 Cops7b 0 actggagagatgatggctcagtg gatttcctgaaaggagctggtgt 5 4 6 1.1.2.1.6.4 BCBC-5A-0 14094322 P107210 Gnpat DistalPromoter P107210 DistalPromoter Unique Tile chr8:127745728-127747776 (+) NM_010322 + 1400 127749176 14712 Gnpat AU019525|D1Ertd819e|DAPAT|DHAPAT glyceronephosphate O-acyltransferase MGI:1343460 Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558; Mm.29114; Mm.425558 8 8 E2|8 78.8 cM GNPAT 8443 NM_025615 - 1305 127749081 66523 2810004N23Rik 0 cagagactgcagttacagcacca atggtcctgggaactatgacgtt 5 4 7 1.1.2.1.7.4 BCBC-5A-0 14094341 P105901 Brp44l DistalPromoter P105901 DistalPromoter Unique Tile chr17:8119206-8121016 (+) NM_018819 + 967 8121983 55951 Brp44l 0610006G08Rik|3830411I18Rik|MGC117549 brain protein 44-like MGI:1915240 Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510; Mm.259910; Mm.288510 17 17 A1|17 7.8 cM BRP44L 51660 NM_134114 + 28259 8149275 106489 5630401J11Rik 0 cactttcatcgtgtagcatgcag cttggggcgaaagttattaaacg 5 4 8 1.1.2.1.8.4 BCBC-5A-0 14094360 P104223 Comt DistalPromoter P104223 DistalPromoter Unique Tile chr16:18341864-18343757 (-) NM_007744 - 1789 18340075 12846 Comt D16Wsu103e|D330014B15Rik catechol-O-methyltransferase MGI:88470 Mm.100940 16 16 A3|16 11.2 cM COMT 1312 NM_013711 + 1864 18340000 26462 Txnrd2 0 acaactgcataattccagctcca tccactactgactggaggactcg 5 4 9 1.1.2.1.9.4 BCBC-5A-0 14094379 P203077 Atf2 ProximalPromoter P203077 ProximalPromoter Unique Tile chr2:73693257-73694253 (-) NM_009715;NM_001025093; - 164 73693421 11909 Atf2 Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|MGC105211|MGC105222|mXBP activating transcription factor 2 MGI:109349 Mm.209903 2 2 C3 ATF2 1386 NM_175015 - 17648 73711901 228033 Atp5g3 1 ccttttgatcactgcctttgaac cttcttcctctgcatccctacaa 5 4 10 1.1.2.1.10.4 BCBC-5A-0 14094398 P200134 Asf1b ProximalPromoter P200134 ProximalPromoter Unique Tile chr8:86844829-86845892 (+) NM_024184 + 94 86845798 66929 Asf1b 1700003K02Rik|AA409591 ASF1 anti-silencing function 1 homolog B (S. cerevisiae) MGI:1914179 Mm.29680 8 8 C3 ASF1B 55723 NM_008854 + 17200 86863092 18747 Prkaca 0 aaggtaagtttcacagacagcgg cagtgacttgcgacagagaagaa 5 4 11 1.1.2.1.11.4 BCBC-5A-0 14094417 P204004 ProximalPromoter P204004 ProximalPromoter Inter Repeats Tile chr5:95004086-95005077 (-) 0 attcaaatgagcctcctacctcc aattggaatgaaacccaaggtct 5 4 12 1.1.2.1.12.4 BCBC-5A-0 14094436 P202716 Ms4a7 ProximalPromoter P202716 ProximalPromoter Unique Tile chr19:11401620-11402621 (-) NM_027836;NM_001025610; - 1519 11403139 109225 Ms4a7 9130422I10Rik|A430103C15Rik|CD20l4|CFFMA membrane-spanning 4-domains, subfamily A, member 7 MGI:1918846 Mm.193094 19 19 A 0 gaacaaagcatagttggattggg tggatttgccaggtctcatatct 5 4 13 1.1.2.1.13.4 BCBC-5A-0 14094455 P205890 Stk16 ProximalPromoter P205890 ProximalPromoter Unique Tile chr1:75092761-75093759 (+) NM_011494 + 243 75094002 20872 Stk16 EDPK|Krct|PKL12 serine/threonine kinase 16 MGI:1313271 Mm.17461 1 1 C3 STK16 8576 NM_009447 - 8620 75102379 22145 Tuba4 0 ttacttctcgaagtgctgaaccc ctctgtctcccaatgtcagaggt 5 4 14 1.1.2.1.14.4 BCBC-5A-0 14094474 P202957 Clec12a ProximalPromoter P202957 ProximalPromoter Unique Tile chr6:129314751-129315754 (+) NM_177686 + 207 129315961 232413 Clec12a CLL-1|D230024O04|Micl C-type lectin domain family 12, member a MGI:3040968 Mm.90241 6 6 F3 CLEC12A 160364 NM_199034 - 17277 129297474 381816 4922502D21Rik 0 attgacacacatggacagattgg tctgaaacagggaaataatcgga 5 4 15 1.1.2.1.15.4 BCBC-5A-0 14094493 P200792 Tiparp ProximalPromoter P200792 ProximalPromoter Unique Tile chr3:65615330-65616366 (+) NM_178892 + 9 65616375 99929 Tiparp AW558171|DDF1|PARP-7|PARP7 TCDD-inducible poly(ADP-ribose) polymerase MGI:2159210 Mm.246398 3 3 E1 TIPARP 25976 NM_001033527 - 942 65617308 71004 4931440P22Rik 1 ttaatctgggttagcagtgccat tcagctccagctctgctttaagt 5 4 16 1.1.2.1.16.4 BCBC-5A-0 14094512 P200960 Efs ProximalPromoter P200960 ProximalPromoter Unique Tile chr14:53880024-53881078 (-) NM_010112 - 42 53880066 13644 Efs - embryonal Fyn-associated substrate MGI:105311 Mm.236438 14 14 C2 EFS 10278 NM_080729 + 5901 53886979 140806 Il25 2 gacagatgtggggctaatgaaag tcacttcccaggctaagagacag 5 4 17 1.1.2.1.17.4 BCBC-5A-0 14094531 P210175 ProximalPromoter P210175 ProximalPromoter Unique Tile chr11:22242206-22243147 (-) 0 gagggttgagaagggtctttgat ttgacactgtgggcatactgact 5 4 18 1.1.2.1.18.4 BCBC-5A-0 14094550 P207428 Prei3 ProximalPromoter P207428 ProximalPromoter Unique Tile chr1:55074879-55075936 (+) NM_025283 + 99 55075837 19070 Prei3 - preimplantation protein 3 MGI:104899 Mm.291037; Mm.408211; Mm.291037; Mm.408211; Mm.291037; Mm.408211; Mm.291037; Mm.408211; Mm.291037; Mm.408211; Mm.291037; Mm.408211; Mm.291037; Mm.408211; Mm.291037; Mm.408211; Mm.291037; Mm.408211; Mm.291037; Mm.408211; Mm.291037; Mm.408211; Mm.291037; Mm.408211 1 1 C1 PREI3 25843 NM_008303 + 41946 55032933 15528 Hspe1 0 caagggattcagaaaaaggtgtg actctgtgacaggaaagccgtag 5 4 19 1.1.2.1.19.4 BCBC-5A-0 14094209 P100306 Kif3c ProximalPromoter P100306 ProximalPromoter Unique Tile chr12:3364474-3365754 (+) NM_008445 + 623 3365131 16570 Kif3c KIAA4058|mKIAA4058 kinesin family member 3C MGI:107979 Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688; Mm.392656; Mm.7688 12 12 A1.1|12 4.0 cM KIF3C 3797 1 tggcagagcagtagaggaagg ggcagaatccctaggttaccg 5 5 1 1.1.2.1.1.5 BCBC-5A-0 14094228 P101146 Acot1 ProximalPromoter P101146 ProximalPromoter Unique Tile chr12:84898001-84898970 (+) NM_012006 + 275 84899245 26897 Acot1 ACH2|CTE-1|CTE-I|Cte1|D12Ucla1 acyl-CoA thioesterase 1 MGI:1349396 Mm.1978 12 12 D1 NM_134188 + 20364 84877637 171210 Acot2 1 tggtcgaatccactgtctcct gagacacacttggcctggttc 5 5 2 1.1.2.1.2.5 BCBC-5A-0 14094247 P102279 Fgf2 ProximalPromoter P102279 ProximalPromoter Unique Tile chr3:37539002-37540043 (+) NM_008006 + 355 37540398 14173 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 MGI:95516 Mm.32171 3 3 A2-B|3 19.3 cM FGF2 2247 NM_177853 - 1246 37541289 329626 A930011G24 0 aagttcctcacaccagtttctgc tgcaagtttctaactttctccgc 5 5 3 1.1.2.1.3.5 BCBC-5A-0 14094266 P103029 Rorc ProximalPromoter P103029 ProximalPromoter Unique Tile chr3:94457341-94458351 (+) NM_011281 + 97 94458254 19885 Rorc Nr1f3|RORgamma|TOR|Thor RAR-related orphan receptor gamma MGI:104856 Mm.4372 3 3 F2 RORC 6097 NM_177250 + 26271 94484622 320747 Lrrn6d 0 aggcacagctaatcaaactctgg ctttagggtctcttaccccgaga 5 5 4 1.1.2.1.4.5 BCBC-5A-0 14094285 P000589 Blank P000589 Buffer Control Negative Blank 5 5 5 1.1.2.1.5.5 BCBC-5A-0 14094304 P106899 Pira6 DistalPromoter P106899 DistalPromoter Unique Tile chr7:3873757-3875770 (+) NM_011093;NM_008848; + 1459 3877229 18729 Pira6 12M1|Pira10|p91B paired-Ig-like receptor A6 Mm.326531 7 7 A1 0 ttcactaagggtgtggccagtta ccaattccatgcaggttttatca 5 5 6 1.1.2.1.6.5 BCBC-5A-0 14094323 P107232 Hoxa2 DistalPromoter P107232 DistalPromoter Unique Tile chr6:52095664-52097744 (-) NM_010451 - 1250 52094414 15399 Hoxa2 AI324701|HOX1.11|Hox-1.11|MGC151482|MGC151484 homeo box A2 MGI:96174 Mm.131 6 6 B3|6 26.29 cM HOXA2 3199 NM_010449 - 7764 52087900 15394 Hoxa1 0 cagatccatgaaggcaaattcag tcttcgagtccttgtcactctgg 5 5 7 1.1.2.1.7.5 BCBC-5A-0 14094342 P105598 Rbm10 DistalPromoter P105598 DistalPromoter Unique Tile chrX:19775298-19777447 (-) NM_145627 + 493 19776954 236732 Rbm10 E430039K10Rik|MGC7826|mKIAA0122 RNA binding motif protein 10 MGI:2384310 Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632; Mm.279194; Mm.383632 X X A1.3 RBM10 8241 NM_019435 - 785 19774513 104130 Ndufb11 0 agctctgggttcaatgaaagacc tttgcccaccgaactttttatct 5 5 8 1.1.2.1.8.5 BCBC-5A-0 14094361 P104157 Aqp1 DistalPromoter P104157 DistalPromoter Unique Tile chr6:55262256-55264300 (+) NM_007472 + 1709 55266009 11826 Aqp1 - aquaporin 1 MGI:103201 Mm.18625 6 6 B3|6 27.0 cM AQP1 358 NM_001003685 + 41639 55305939 14602 Ghrhr 0 cagagggatataatcaggtgccc accctctagagaggcagtcagga 5 5 9 1.1.2.1.9.5 BCBC-5A-0 14094380 P203102 Lrrc44 ProximalPromoter P203102 ProximalPromoter Unique Tile chr3:155027495-155028463 (+) NM_028938 + 263 155028726 74435 Lrrc44 4930438B07Rik|4930511J15Rik|4933403H06Rik|BB020367|MGC132959 leucine rich repeat containing 44 MGI:1921685 Mm.195711 3 3 H4 LRRC44 127255 NM_029330 - 203 155028666 75540 Fpgt 0 tctctctatcttggcaatgggag tttttcccttttcctcctctctg 5 5 10 1.1.2.1.10.5 BCBC-5A-0 14094399 P200159 1700018F24Rik ProximalPromoter P200159 ProximalPromoter Unique Tile chr5:145295775-145296699 (+) NM_027069 + 183 145296516 69396 1700018F24Rik AV045857 RIKEN cDNA 1700018F24 gene MGI:1916646 Mm.45463 5 5 G2 NM_001013774 - 32615 145263160 381686 AW146299 0 gaatgaaaggagacagccagcta ttaccttgggattcctgtctgaa 5 5 11 1.1.2.1.11.5 BCBC-5A-0 14094418 P204029 Wdr5b ProximalPromoter P204029 ProximalPromoter Unique Tile chr16:35959738-35960832 (+) NM_027113 + 104 35960936 69544 Wdr5b 2310009C03Rik|AI606931 WD repeat domain 5B MGI:1916794 Mm.37802 16 16 B3 WDR5B 54554 NM_027342 - 30430 35991262 70186 2310056P07Rik 0 acaaagcaaaacctagaggtccc ctccaggacaggaagttgacact 5 5 12 1.1.2.1.12.5 BCBC-5A-0 14094437 P204578 Irf1 ProximalPromoter P204578 ProximalPromoter Unique Tile chr11:53612618-53613518 (+) NM_008390 + 18 53613500 16362 Irf1 AU020929|Irf-1 interferon regulatory factor 1 MGI:96590 Mm.105218 11 11 B1.3|11 29.0 cM IRF1 3659 NM_010558 + 48402 53564216 16191 Il5 1 gtcgaggatggagagctgaagta gactgtgaaagcacgtcctacct 5 5 13 1.1.2.1.13.5 BCBC-5A-0 14094456 P205914 Tead2 ProximalPromoter P205914 ProximalPromoter Unique Tile chr7:45082811-45083727 (+) NM_011565 + 67 45083794 21677 Tead2 ETF|Etdf|TEAD-2|TEF-4|TEF4 TEA domain family member 2 MGI:104904 Mm.3019 7 7 B5|7 23.0 cM TEAD2 8463 NM_015789 - 2918 45079893 50722 Dkkl1 1 ctgggattaaaggcatgtgctac ggtgcttgctttaggagagatga 5 5 14 1.1.2.1.14.5 BCBC-5A-0 14094475 P202981 Nf1 ProximalPromoter P202981 ProximalPromoter Unique Tile chr11:79154842-79155834 (+) NM_010897 + 252 79156086 18015 Nf1 AW494271|E030030H24Rik|Nf-1 neurofibromatosis 1 MGI:97306 Mm.255596 11 11 B4-5|11 46.06 cM NF1 4763 1 gaaatccccaagtagaacaggct gagcgagcttgagattgagagc 5 5 15 1.1.2.1.15.5 BCBC-5A-0 14094494 P200816 BC052484 ProximalPromoter P200816 ProximalPromoter Unique Tile chr17:25462717-25463617 (+) NM_177822 + 24 25463641 328783 BC052484 4732467B22 cDNA sequence BC052484 MGI:3607710 Mm.183275 17 17 A3.3 MPFL 401827 NM_028009 + 7328 25455389 106707 Rpusd1 0 gaggaagactcagaaacagccaa gaaggagactagactgtgccagg 5 5 16 1.1.2.1.16.5 BCBC-5A-0 14094513 P200894 Ccdc38 ProximalPromoter P200894 ProximalPromoter Unique Tile chr10:92969381-92970319 (+) NM_175488 + 111 92970430 237465 Ccdc38 4933417K05Rik coiled-coil domain containing 38 MGI:2444738 Mm.259642 10 10 C2 CCDC38 120935 1 tacagacctcaccttctgcctct ggcacagtgtgtttttgtctctg 5 5 17 1.1.2.1.17.5 BCBC-5A-0 14094532 P210199 Solh ProximalPromoter P210199 ProximalPromoter Unique Tile chr17:25749238-25750329 (-) NM_015830 - 35932 25713306 50817 Solh - small optic lobes homolog (Drosophila) MGI:1355075 Mm.216072 17 17 A3 SOLH 6650 0 tctgagacagggttctgggatag gttcacagaaacagaatttgggc 5 5 18 1.1.2.1.18.5 BCBC-5A-0 14094551 P207452 Tmem42 ProximalPromoter P207452 ProximalPromoter Unique Tile chr9:122868761-122869789 (+) NM_025339 + 234 122870023 66079 Tmem42 0610027O18Rik|4933429E06Rik|AV003444|D9Ertd662e|MGC29956 transmembrane protein 42 MGI:1277176 Mm.347935; Mm.394727; Mm.347935; Mm.394727; Mm.347935; Mm.394727; Mm.347935; Mm.394727; Mm.347935; Mm.394727; Mm.347935; Mm.394727; Mm.347935; Mm.394727; Mm.347935; Mm.394727; Mm.347935; Mm.394727; Mm.347935; Mm.394727 9 9 F4|9 72.0 cM TMEM42 131616 NM_177911 + 13649 122883438 331046 Tgm4 2 ttatttcatccacaaaaccaccc gaggaatctgctgacgtgaactt 5 5 19 1.1.2.1.19.5 BCBC-5A-0 14094210 P100330 Mcm4 ProximalPromoter P100330 ProximalPromoter Unique Tile chr16:15551563-15552579 (-) NM_008565 - 629 15550934 17217 Mcm4 19G|AI325074|AU045576|Cdc21|KIAA4003|Mcmd4|mKIAA4003|mcdc21 minichromosome maintenance deficient 4 homolog (S. cerevisiae) MGI:103199 Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229; Mm.1500; Mm.394229 16 16 B1|16 9.2 cM MCM4 4173 NM_011159 + 97 15551466 19090 Prkdc 0 agctgctgtccacagaggaac cagctgattcgtagtctgggg 5 6 1 1.1.2.1.1.6 BCBC-5A-0 14094229 P101452 Fxc1 ProximalPromoter P101452 ProximalPromoter Unique Tile chr7:105512957-105514027 (+) NM_019502 + 333 105514360 14356 Fxc1 Tim10b|Tim9b|Timm10b fractured callus expressed transcript 1 MGI:1315196 Mm.220330 7 7 F1 FXC1 26515 NM_029802 - 109 105514136 76932 Arfip2 0 ggaacacagggatggatgaaa acgaacctgtactgagggcaa 5 6 2 1.1.2.1.2.6 BCBC-5A-0 14094248 P102303 Gif ProximalPromoter P102303 ProximalPromoter Unique Tile chr19:11813959-11814872 (+) NM_008118 + 255 11814617 14603 Gif AV073125|MGC144768 gastric intrinsic factor MGI:1202394 Mm.456 19 19 A GIF 2694 NM_025606 + 22563 11837435 94063 Mrpl16 0 cactgtagctctcttcaggcaca gtgactgctgttcctcctcattt 5 6 3 1.1.2.1.3.6 BCBC-5A-0 14094267 P103053 Slc2a1 ProximalPromoter P103053 ProximalPromoter Unique Tile chr4:118605837-118606788 (+) NM_011400 + 81 118606707 20525 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 MGI:95755 Mm.21002 4 4 D2.1|4 52.0 cM SLC2A1 6513 0 tgaacctagatgggacatggact cacttaagaccccgtagctcaga 5 6 4 1.1.2.1.4.6 BCBC-5A-0 14094286 P000613 Blank P000613 Buffer Control Negative Blank 5 6 5 1.1.2.1.5.6 BCBC-5A-0 14094305 P105690 Foxc1 DistalPromoter P105690 DistalPromoter Unique Tile chr13:31810931-31813080 (+) NM_008592 + 1030 31814110 17300 Foxc1 FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda forkhead box C1 MGI:1347466 Mm.12949 13 13 A3.2|13 20.0 cM FOXC1 2296 0 aaggctaaacaccgaaccaagag tgaagagataagccccgaatgat 5 6 6 1.1.2.1.6.6 BCBC-5A-0 14094324 P107253 Igfbp4 DistalPromoter P107253 DistalPromoter Unique Tile chr11:98853918-98855936 (+) NM_010517 + 1418 98857354 16010 Igfbp4 AI875747|Deb2|IGFBP-4 insulin-like growth factor binding protein 4 MGI:96439 Mm.233799 11 11 D IGFBP4 3487 NM_011623 - 13713 98840205 21973 Top2a 0 agcctgtaccagtaactctgccc ttgggtctctcctgtctcatctg 5 6 7 1.1.2.1.7.6 BCBC-5A-0 14094343 P105944 Htra1 DistalPromoter P105944 DistalPromoter Unique Tile chr7:130723796-130725964 (+) NM_019564 + 1418 130727382 56213 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 MGI:1929076 Mm.30156 7 7 F3 HTRA1 5654 0 gtcaaagcttccctctggaaaaa cgcttgtgttccttctggttcta 5 6 8 1.1.2.1.8.6 BCBC-5A-0 14094362 P104181 Calm3 DistalPromoter P104181 DistalPromoter Unique Tile chr7:16083389-16085284 (-) NM_007590 - 913 16082476 12315 Calm3 CaMA|R75142 calmodulin 3 MGI:103249 Mm.288630 7 7 A2|7 4.0 cM CALM3 808 NM_008967 + 18352 16065037 19222 Ptgir 2 ttcagctcttacctcctggttcc gtggggatctggacttgactctt 5 6 9 1.1.2.1.9.6 BCBC-5A-0 14094381 P205938 ProximalPromoter P205938 ProximalPromoter Unique Tile chr7:11609038-11609962 (+) 0 acacccatggaaggagttacaga tttcctgtggacttttggtagga 5 6 10 1.1.2.1.10.6 BCBC-5A-0 14094400 P200184 ProximalPromoter P200184 ProximalPromoter Unique Tile chr1:120397491-120398456 (+) 0 ctgtcattcctgtctacccatcc ctccacgcaaagagctgtagatt 5 6 11 1.1.2.1.11.6 BCBC-5A-0 14094419 P204053 Dcp1a ProximalPromoter P204053 ProximalPromoter Unique Tile chr14:29307780-29308710 (+) NM_133761 + 90 29308620 75901 Dcp1a 1110066A22Rik|4930568L04Rik|AU019772|D14Ertd817e|Mitc1|SMIF decapping enzyme MGI:1923151 Mm.28733 14 14 A3 DCP1A 55802 NM_028981 - 11455 29320165 12289 Cacna1d 0 aactcaatgaaaacagcctgagc gctcgactcaacaactccatctt 5 6 12 1.1.2.1.12.6 BCBC-5A-0 14094438 P204602 Klc2 ProximalPromoter P204602 ProximalPromoter Unique Tile chr19:5118696-5119627 (-) NM_008451 - 444 5118252 16594 Klc2 8030455F02Rik|AW212649 kinesin light chain 2 MGI:107953 Mm.271648; Mm.412264; Mm.271648; Mm.412264; Mm.271648; Mm.412264; Mm.271648; Mm.412264; Mm.271648; Mm.412264; Mm.271648; Mm.412264 19 19 A|19 9.0 cM KLC2 64837 NM_029576 - 11700 5106996 76308 Rab1b 0 gctgcaaatgaaactcaagtcct cgctctagagacgcacctcttac 5 6 13 1.1.2.1.13.6 BCBC-5A-0 14094457 P205848 Slc16a7 ProximalPromoter P205848 ProximalPromoter Unique Tile chr10:124731655-124732653 (-) NM_011391 - 60 124731595 20503 Slc16a7 4921534N07Rik|MGC143699|MGC143700|Mct2 solute carrier family 16 (monocarboxylic acid transporters), member 7 MGI:1330284 Mm.29161 10 10 D3 SLC16A7 9194 0 cacatcatatctgtccccaatga tatagccagggtcaaaaaggtga 5 6 14 1.1.2.1.14.6 BCBC-5A-0 14094476 P203005 Ccdc71 ProximalPromoter P203005 ProximalPromoter Unique Tile chr9:108317401-108318370 (+) NM_133744 + 285 108318655 72454 Ccdc71 2600016J21Rik coiled-coil domain containing 71 MGI:1919704 Mm.46488 9 9 F2 CCDC71 64925 NM_030075 - 1314 108319684 78267 Klhdc8b 0 ggtgccaaagctctgagaagtaa tcctggcaagctctatgctattc 5 6 15 1.1.2.1.15.6 BCBC-5A-0 14094495 P200840 Txndc11 ProximalPromoter P200840 ProximalPromoter Unique Tile chr16:11048465-11049444 (-) NM_029582;NM_134105; - 355 11048110 106200 Txndc11 2810408E11Rik|AI427833|EFP1|Txdc11 thioredoxin domain containing 11 MGI:1923620 Mm.291015 16 16 B1 TXNDC11 51061 NM_145931 - 40423 11089867 106205 Zc3h7a 2 agattattttgccctccctacca tagttggtggtgtctccttagcg 5 6 16 1.1.2.1.16.6 BCBC-5A-0 14094514 P200918 ProximalPromoter P200918 ProximalPromoter Unique Tile chr8:48719296-48720344 (-) 0 gattcagggataggtacggctct atttgggctggatccttgattat 5 6 17 1.1.2.1.17.6 BCBC-5A-0 14094533 P207113 Cldn15 ProximalPromoter P207113 ProximalPromoter Unique Tile chr5:137251400-137252357 (+) NM_021719 + 138 137252495 60363 Cldn15 2210009B08Rik|BB107105 claudin 15 MGI:1913103 Mm.87202 5 5 G2 CLDN15 24146 NM_025562 + 4670 137246730 66437 Fis1 0 ttgactttcctgcattcttgtca acttagggatacagccaaggagc 5 6 18 1.1.2.1.18.6 BCBC-5A-0 14094552 P207476 Tomm7 ProximalPromoter P207476 ProximalPromoter Unique Tile chr5:23354387-23355372 (-) NM_025394 - 199 23354188 66169 Tomm7 1110020J08Rik|AW047273|TOM7 translocase of outer mitochondrial membrane 7 homolog (yeast) MGI:1913419 Mm.291868; Mm.397607; Mm.291868; Mm.397607; Mm.291868; Mm.397607; Mm.291868; Mm.397607; Mm.291868; Mm.397607; Mm.291868; Mm.397607; Mm.291868; Mm.397607 5 5 A3 TOMM7 54543 0 ggatcagccaattcacaagtttc attgtctttccagataggggctc 5 6 19 1.1.2.1.19.6 BCBC-5A-0 14094211 P100354 Nap1l4 ProximalPromoter P100354 ProximalPromoter Unique Tile chr7:143359128-143360197 (-) NM_008672 - 648 143358480 17955 Nap1l4 2810410H14Rik|AI316776|D7Wsu30e|Nap2 nucleosome assembly protein 1-like 4 MGI:1316687 Mm.294625 7 7 F5|7 69.55 cM NAP1L4 4676 NM_009434 - 47214 143311914 22113 Phlda2 1 ctgctcttccagaggtcctga aagctgcacaagccagtaagc 5 7 1 1.1.2.1.1.7 BCBC-5A-0 14094230 P101476 Ptpn9 ProximalPromoter P101476 ProximalPromoter Unique Tile chr9:56792199-56793131 (+) NM_019651 + 27 56793104 56294 Ptpn9 MEG2 protein tyrosine phosphatase, non-receptor type 9 MGI:1928376 Mm.325643 9 - PTPN9 5780 NM_178374 + 43139 56749060 66069 Snupn1 0 ctgtgagttcaaggccagctt acggctccattgagaaactga 5 7 2 1.1.2.1.2.7 BCBC-5A-0 14094249 P102237 Cyp7a1 ProximalPromoter P102237 ProximalPromoter Unique Tile chr4:6203153-6204097 (-) NM_007824 - 375 6202778 13122 Cyp7a1 - cytochrome P450, family 7, subfamily a, polypeptide 1 MGI:106091 Mm.57029 4 4 A1 CYP7A1 1581 0 aaggcaataggtccaatcctctc tggctttaatactggctgtccat 5 7 3 1.1.2.1.3.7 BCBC-5A-0 14094268 P103077 Tcf21 ProximalPromoter P103077 ProximalPromoter Unique Tile chr10:22509660-22510656 (-) NM_011545 - 109 22509551 21412 Tcf21 Pod-1|Pod1|capsulin|epc|epicardin transcription factor 21 MGI:1202715 Mm.16497 10 10 A3|10 16.0 cM TCF21 6943 0 ttctttctccaaagccatgagtc cctttcacaagcacaggagactt 5 7 4 1.1.2.1.4.7 BCBC-5A-0 14094287 P000637 Blank P000637 Buffer Control Negative Blank 5 7 5 1.1.2.1.5.7 BCBC-5A-0 14094306 P106863 Notch3 DistalPromoter P106863 DistalPromoter Unique Tile chr17:31896780-31898800 (-) NM_008716 - 1222 31895558 18131 Notch3 AW229011 Notch gene homolog 3 (Drosophila) MGI:99460 Mm.4945 17 17 B1|17 20.0 cM NOTCH3 4854 NM_001033163 - 19369 31918169 71932 Abhd9 0 tgggcttatagcagaggaggaac agatgtcatggttcacacggtct 5 7 6 1.1.2.1.6.7 BCBC-5A-0 14094325 P107353 Ptp4a1 DistalPromoter P107353 DistalPromoter Unique Tile chr1:30895078-30897048 (-) NM_011200 - 787 30894291 19243 Ptp4a1 AA415290|AU019864|C130021B01|MGC102117|MGC25304|Prl-1 protein tyrosine phosphatase 4a1 MGI:1277096 Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302; Mm.374437; Mm.393302 1 1 B PTP4A1 7803 0 agtgacagtggccattgctgtat gctaagctttccccttttgttga 5 7 7 1.1.2.1.7.7 BCBC-5A-0 14094344 P105965 Kcnd2 DistalPromoter P105965 DistalPromoter Unique Tile chr6:21163367-21165551 (+) NM_019697 + 558 21166109 16508 Kcnd2 AI839615|AW555701|Kv4.2|R75121|mKIAA1044 potassium voltage-gated channel, Shal-related family, member 2 MGI:102663 Mm.320691; Mm.391683; Mm.320691; Mm.391683; Mm.320691; Mm.391683; Mm.320691; Mm.391683; Mm.320691; Mm.391683; Mm.320691; Mm.391683; Mm.320691; Mm.391683; Mm.320691; Mm.391683; Mm.320691; Mm.391683; Mm.320691; Mm.391683 6 6 A2-A3.1|6 7.2 cM KCND2 3751 1 cagcaggtgtcctaaacttccct gctcaggtgcagtgtgacagtta 5 7 8 1.1.2.1.8.7 BCBC-5A-0 14094363 P104205 Cdc2l1 DistalPromoter P104205 DistalPromoter Unique Tile chr4:154474590-154476769 (+) NM_007661 + 1192 154477961 12537 Cdc2l1 AA989746|CDK11-p110|CDK11-p46|CDK11-p58|Cdc2l2|p58 cell division cycle 2-like 1 MGI:88353 Mm.267410 4 4 E2|4 79.4 cM CDC2L1 984 NM_011985 - 20321 154497090 26561 Mmp23 0 caggcattgaggatgaagaattg atgacgtccaccagtctttacca 5 7 9 1.1.2.1.9.7 BCBC-5A-0 14094382 P205962 Ucp2 ProximalPromoter P205962 ProximalPromoter Unique Tile chr7:100366315-100367285 (+) NM_011671 + 160 100367445 22228 Ucp2 Slc25a8 uncoupling protein 2 (mitochondrial, proton carrier) MGI:109354 Mm.171378 7 7 E2|7 50.0 cM UCP2 7351 NM_009464 + 19243 100347072 22229 Ucp3 1 agatttttccagaacgatggaca tcagatcttccccttctattccc 5 7 10 1.1.2.1.10.7 BCBC-5A-0 14094401 P200115 Prdx2 ProximalPromoter P200115 ProximalPromoter Unique Tile chr8:87858890-87859831 (+) NM_011563 + 2 87859833 21672 Prdx2 AL022839|Band-8|NkefB|PRP|PrxII|TDX1|TPx|TPx-B|TR|TSA|Tdpx1|Torin peroxiredoxin 2 MGI:109486 Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373; Mm.347009; Mm.393373 8 8 C3|8 36.0 cM PRDX2 7001 NM_027187 - 2700 87856190 69724 Rnaseh2a 0 tattcttcccttaggccttttgc cacgggtagagacaggaaagaga 5 7 11 1.1.2.1.11.7 BCBC-5A-0 14094420 P204077 Aatk ProximalPromoter P204077 ProximalPromoter Unique Tile chr11:119857841-119858841 (-) NM_007377 - 4953 119862794 11302 Aatk AATYK|mKIAA0641 apoptosis-associated tyrosine kinase MGI:1197518 Mm.6826 11 11 E2 AATK 9625 NM_009734 - 44067 119902908 12009 Azi1 2 actgaggcagggtaaaccctaag ctatgagactccagctttgctcc 5 7 12 1.1.2.1.12.7 BCBC-5A-0 14094439 P204626 Lep ProximalPromoter P204626 ProximalPromoter Unique Tile chr6:29009413-29010317 (+) NM_008493 + 87 29010230 16846 Lep ob|obese leptin MGI:104663 Mm.277072 6 6 A3.3|6 10.5 cM LEP 3952 0 caaagctattttcagttggggtg tggatggggtgctattagaaaga 5 7 13 1.1.2.1.13.7 BCBC-5A-0 14094458 P205872 Serpinb9c ProximalPromoter P205872 ProximalPromoter Unique Tile chr13:33167421-33168397 (-) NM_011453 - 243 33167178 20707 Serpinb9c 3830421J05Rik|NK9|Spi11|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9c MGI:894669 Mm.219429 13 13 A3.3|13 12.7 cM NM_011460 + 32026 33200423 20726 Serpinb9d 0 actccttgttgtgtcaggggtta gtggttctaattgattgcaaggc 5 7 14 1.1.2.1.14.7 BCBC-5A-0 14094477 P206722 Hsd17b12 ProximalPromoter P206722 ProximalPromoter Unique Tile chr2:93958910-93959823 (-) NM_019657 - 162 93958748 56348 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 MGI:1926967 Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889; Mm.22505; Mm.391889 2 2 E1 HSD17B12 51144 0 ccaaagccatgttttaggttctg tgtctcctattggttagccttcg 5 7 15 1.1.2.1.15.7 BCBC-5A-0 14094496 P200864 4921507A12 ProximalPromoter P200864 ProximalPromoter Unique Tile chr7:39187488-39188437 (-) NM_177890 - 124 39187364 330513 4921507A12 - hypothetical protein 4921507A12 Mm.84032 7 7 B3 0 tgccactctccttctaagacacc tgaaagacaggattgagtggaca 5 7 16 1.1.2.1.16.7 BCBC-5A-0 14094515 P200942 4933411G11Rik ProximalPromoter P200942 ProximalPromoter Unique Tile chr5:143445080-143446139 (+) NM_177880 + 17 143446156 330228 4933411G11Rik - RIKEN cDNA 4933411G11Rik gene MGI:3612701 Mm.255752 5 5 G2 NM_021326 - 224 143445915 57782 Rbak 1 aggatcacccactaccagaacaa acaagaaggtaagagcatggctg 5 7 17 1.1.2.1.17.7 BCBC-5A-0 14094534 P207137 Fxyd6 ProximalPromoter P207137 ProximalPromoter Unique Tile chr9:45120555-45121591 (+) NM_022004 + 158 45121433 59095 Fxyd6 0610030I18Rik|Php FXYD domain-containing ion transport regulator 6 MGI:1890226 Mm.208287 9 9 A5.2 FXYD6 53826 NM_052824;NM_052823;NM_007503; + 28621 45150212 11936 Fxyd2 0 tagaacagccttccccactacag gaaacaaacaagactcggaggaa 5 7 18 1.1.2.1.18.7 BCBC-5A-0 14094553 P207409 6030445D17Rik ProximalPromoter P207409 ProximalPromoter Unique Tile chr4:135740667-135741635 (+) NM_177079 + 7310 135734325 320133 6030445D17Rik - RIKEN cDNA 6030445D17 gene MGI:2443447 Mm.97196 4 4 D3 NM_008309 + 45062 135695605 15552 Htr1d 0 ttctcctgtttcaccctcttcag gctcaaaagaaacgctttcagag 5 7 19 1.1.2.1.19.7 BCBC-5A-0 14094212 P100378 ProximalPromoter P100378 ProximalPromoter Unique Tile chr6:85040756-85041798 (+) 0 cagcaggaagaaagcctctga cagtaactccagctcatgggg 5 8 1 1.1.2.1.1.8 BCBC-5A-0 14094231 P101500 Nme3 ProximalPromoter P101500 ProximalPromoter Unique Tile chr17:24623162-24624164 (+) NM_019730 + 56 24624108 79059 Nme3 1810009F08Rik|AI413736|DR-nm23|Ndk3|Nm23-DR|Nm23-M3 expressed in non-metastatic cells 3 MGI:1930182 Mm.430765 17 17 A3.3 NME3 4832 NM_023260 + 402 24622760 79044 Mrps34 0 gtttcacccactctgagccac ctcacctgaggggaagaggtt 5 8 2 1.1.2.1.2.8 BCBC-5A-0 14094250 P102261 Epha4 ProximalPromoter P102261 ProximalPromoter Unique Tile chr1:77398155-77399066 (-) NM_007936 - 4 77398151 13838 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 MGI:98277 Mm.3249 1 1 C1-C5|1 43.0 cM EPHA4 2043 1 gtgtccaggaatggctagaagtg ggatgaaatagaaaatcccagcc 5 8 3 1.1.2.1.3.8 BCBC-5A-0 14094269 P103383 Crlf3 ProximalPromoter P103383 ProximalPromoter Unique Tile chr11:79897407-79898331 (-) NM_018776 - 257 79897150 54394 Crlf3 BB164954|Creme9|Crlf2|Cytor4 cytokine receptor-like factor 3 MGI:1860086 Mm.272093 11 11 B5|11 47.21 cM CRLF3 51379 NM_001029856 + 7275 79905606 237877 C130052G03Rik 0 actcacgtttctcccagactcac acacgtctctaagtgcttcccac 5 8 4 1.1.2.1.4.8 BCBC-5A-0 14094288 P000661 Blank P000661 Buffer Control Negative Blank 5 8 5 1.1.2.1.5.8 BCBC-5A-0 14094307 P106885 Pdha1 DistalPromoter P106885 DistalPromoter Unique Tile chrX:155483879-155485773 (-) NM_008810 - 1438 155482441 18597 Pdha1 Pdha-1 pyruvate dehydrogenase E1 alpha 1 MGI:97532 Mm.34775 X X F3-F4|X 66.5 cM PDHA1 5160 0 tagacataacccttccaccagca atacacagattgagtgggtggga 5 8 6 1.1.2.1.6.8 BCBC-5A-0 14094326 P107374 Serf1 DistalPromoter P107374 DistalPromoter Unique Tile chr13:101205146-101206957 (+) NM_011353 + 1347 101208304 20365 Serf1 4F5|Msmac1|m4F5 small EDRK-rich factor 1 MGI:1337114 Mm.286177; Mm.410874; Mm.286177; Mm.410874; Mm.286177; Mm.410874; Mm.286177; Mm.410874; Mm.286177; Mm.410874 13 13 D1|13 53.0 cM SERF1A 8293 NM_011420 + 18190 101225147 20595 Smn1 0 cgggctcaatgttgagattacag cattgagagtttctgccagagga 5 8 7 1.1.2.1.7.8 BCBC-5A-0 14094345 P105909 Slc1a4 DistalPromoter P105909 DistalPromoter Unique Tile chr11:20233990-20236026 (-) NM_018861 - 1316 20232674 55963 Slc1a4 ASCT1|AW045657|SATT solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 MGI:2135601 Mm.6379 11 11 A3.1|11 10.92 cM SLC1A4 6509 0 cgtagacaaaatggtgaaggtcg ttcctacagacccatgttcctca 5 8 8 1.1.2.1.8.8 BCBC-5A-0 14094364 P104229 Smc3 DistalPromoter P104229 DistalPromoter Unique Tile chr19:53678262-53680437 (+) NM_007790 + 751 53681188 13006 Smc3 Bamacan|Cspg6|HCAP|Mmip1|SmcD structural maintenace of chromosomes 3 MGI:1339795 Mm.14910 19 19 D2 SMC3 9126 0 ttggctcaagctacacaggaaag acaagttcccaccacactgacat 5 8 9 1.1.2.1.9.8 BCBC-5A-0 14094383 P205987 Xdh ProximalPromoter P205987 ProximalPromoter Unique Tile chr17:73855291-73856288 (-) NM_011723 - 210 73855081 22436 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase MGI:98973 Mm.11223 17 17 E2|17 45.3 cM XDH 7498 0 cttgaagggatttggtgcataag gcaccagatgactgtgaattctg 5 8 10 1.1.2.1.10.8 BCBC-5A-0 14094402 P200141 Itgb3bp ProximalPromoter P200141 ProximalPromoter Unique Tile chr4:99321424-99322331 (-) NM_026348 - 278 99321146 67733 Itgb3bp 4930471O16Rik integrin beta 3 binding protein (beta3-endonexin) Mm.257094 4 4 C6 NM_145549 + 33 99321457 230500 BC020077 0 tataatacacagaccgcctgcct aaggtgctctgcctcttatttcc 5 8 11 1.1.2.1.11.8 BCBC-5A-0 14094421 P204193 Canx ProximalPromoter P204193 ProximalPromoter Unique Tile chr11:50169111-50170155 (-) NM_007597 - 96 50169015 12330 Canx 1110069N15Rik|AI988026|CNX|D11Ertd153e calnexin MGI:88261 Mm.248827 11 11 B1.3|11 30.0 cM CANX 821 0 taaattcaaggccatcttgggta agtggctaaaacgaacgtcagat 5 8 12 1.1.2.1.12.8 BCBC-5A-0 14094440 P204650 Smad1 ProximalPromoter P204650 ProximalPromoter Unique Tile chr8:82295719-82296670 (-) NM_008539 - 179 82295540 17125 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP MAD homolog 1 (Drosophila) MGI:109452 Mm.223717 8 8 C2 SMAD1 4086 1 ggcattttatgggtttatgggat aaaagttctcgaacacgaccatc 5 8 13 1.1.2.1.13.8 BCBC-5A-0 14094459 P205896 Suv39h1 ProximalPromoter P205896 ProximalPromoter Unique Tile chrX:7231805-7232745 (-) NM_011514 - 220 7231585 20937 Suv39h1 AI852103|AL022883|DXHXS7466e|mIS6 suppressor of variegation 3-9 homolog 1 (Drosophila) MGI:1099440 Mm.9244 X X A1-A2|X 1.95 cM SUV39H1 6839 NM_009515 - 14666 7247411 22376 Was 0 ataattgatgggccacattgaag ccagtcataaagggcttgttttg 5 8 14 1.1.2.1.14.8 BCBC-5A-0 14094478 P206746 Clcnkb ProximalPromoter P206746 ProximalPromoter Unique Tile chr4:140688189-140689137 (-) NM_019701 - 99 140688090 56365 Clcnkb CLCKB|Clc-Ka|Clck2|Clcnk1l chloride channel Kb MGI:1930643 Mm.24882 4 4 E1 CLCNKB 1188 NM_013868 + 3717 140692854 29818 Hspb7 0 cttctatcaagcatcggcaaagt aactcacagactgaccaggaagc 5 8 15 1.1.2.1.15.8 BCBC-5A-0 14094497 P200798 Heyl ProximalPromoter P200798 ProximalPromoter Unique Tile chr4:122734807-122735861 (+) NM_013905 + 294 122736155 56198 Heyl Hey3|Hrt3|hesr3 hairy/enhancer-of-split related with YRPW motif-like MGI:1860511 Mm.103615 4 4 D2.2 HEYL 26508 NM_174998 + 49001 122685806 170638 Hpcal4 0 gttcatgccagtcctatctggtc gagaatccggatctgtccctagt 5 8 16 1.1.2.1.16.8 BCBC-5A-0 14094516 P200966 5330401P04Rik ProximalPromoter P200966 ProximalPromoter Unique Tile chr1:52574089-52575039 (+) NM_172654 + 252 52575291 227094 5330401P04Rik 9830163O08 RIKEN cDNA 5330401P04 gene MGI:2444113 Mm.83541 1 1 C1.1 1 ctctagctttgtgtgtgtggtgg tcacatgcaccctctcagaaata 5 8 17 1.1.2.1.17.8 BCBC-5A-0 14094535 P207161 Ctsm ProximalPromoter P207161 ProximalPromoter Unique Tile chr13:61551532-61552629 (-) NM_022326 - 113 61551419 64139 Ctsm 1600027J17Rik|AI324100|Catm cathepsin M MGI:1927229 Mm.425844; Mm.426305; Mm.425844; Mm.426305; Mm.425844; Mm.426305; Mm.425844; Mm.426305; Mm.425844; Mm.426305; Mm.425844; Mm.426305; Mm.425844; Mm.426305 13 13 B3|13 35.0 cM NM_026906 - 27059 61579688 117066 Cts3 0 tgaggttaattctgctctcctgg caaccttggccttcttatgtttg 5 8 18 1.1.2.1.18.8 BCBC-5A-0 14094554 P207434 Polr3e ProximalPromoter P207434 ProximalPromoter Unique Tile chr7:120707800-120708776 (+) NM_025298 + 189 120708965 26939 Polr3e RPC5|Sin polymerase (RNA) III (DNA directed) polypeptide E MGI:1349452 Mm.193632 7 7 F3 POLR3E 55718 2 ggtaggtaaacacacttgcctcg gacgctgagacaaaagaaaaagc 5 8 19 1.1.2.1.19.8 BCBC-5A-0 14094213 P100684 Bub1b ProximalPromoter P100684 ProximalPromoter Unique Tile chr2:118288430-118289480 (+) NM_009773 + 216 118289696 12236 Bub1b AU045529|BUBR1|MGC36092 budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae) MGI:1333889 Mm.29133 2 2 E5 BUB1B 701 NM_138313 - 47311 118241119 171543 Bmf 0 gttgcgagggagagtagagca taagacaagccttcgaaccca 5 9 1 1.1.2.1.1.9 BCBC-5A-0 14094232 P101524 Cpb2 ProximalPromoter P101524 ProximalPromoter Unique Tile chr14:73975179-73976250 (+) NM_019775 + 191 73976441 56373 Cpb2 1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|MGC107573|TAFI carboxypeptidase B2 (plasma) MGI:1891837 Mm.24242 14 14 D2 CPB2 1361 NM_026083 + 42277 74018527 67302 Zc3h13 0 tgctgctcagctttttaagcc ttttaatcctggcattgtggc 5 9 2 1.1.2.1.2.9 BCBC-5A-0 14094251 P102285 Foxl1 ProximalPromoter P102285 ProximalPromoter Unique Tile chr8:124012852-124013761 (+) NM_008024 + 177 124013938 14241 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 MGI:1347469 Mm.390090 8 8 E1|8 65.5 cM FOXL1 2300 NM_013519 + 10293 124002559 14234 Foxc2 0 cagcgtatggagctaaggaccta ttatgtgttgacttagcgctgga 5 9 3 1.1.2.1.3.9 BCBC-5A-0 14094270 P103407 Rnf5 ProximalPromoter P103407 ProximalPromoter Unique Tile chr17:34211993-34213014 (-) NM_019403 - 376 34211617 54197 Rnf5 2410131O05Rik|AA407576|NG2 ring finger protein 5 MGI:1860076 Mm.274542 17 17 B1|17 18.75 cM RNF5 6048 NM_018862 + 4055 34217069 55979 Agpat1 0 agtcccagcttctcacctttctt tctttcttagaaggtccgggttc 5 9 4 1.1.2.1.4.9 BCBC-5A-0 14094289 P000595 Blank P000595 Buffer Control Negative Blank 5 9 5 1.1.2.1.5.9 BCBC-5A-0 14094308 P106907 Prkcz DistalPromoter P106907 DistalPromoter Unique Tile chr4:154206235-154208417 (-) NM_008860;NM_001039079; - 1044 154205191 18762 Prkcz AI098070|C80388|Pkcz|R74924|zetaPKC protein kinase C, zeta MGI:97602 Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884; Mm.28561; Mm.389884 4 4 E2|4 83.0 cM PRKCZ 5590 NM_008072 - 33387 154241804 14403 Gabrd 0 ctgggaataccagcttcagcttt tgaactcaaacctggttctctgc 5 9 6 1.1.2.1.6.9 BCBC-5A-0 14094327 P107396 P4ha2 DistalPromoter P107396 DistalPromoter Unique Tile chr11:53942076-53944027 (+) NM_011031 + 407 53944434 18452 P4ha2 AA407196|C76437|P4hl procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide MGI:894286 Mm.3705 11 11 29.2 cM P4HA2 8974 NM_019417 - 29685 53912391 30794 Pdlim4 2 agtgacccttatctggaggcttg ctaactgcttctctgaggggctc 5 9 7 1.1.2.1.7.9 BCBC-5A-0 14094346 P105931 Sh3glb1 DistalPromoter P105931 DistalPromoter Unique Tile chr3:144651370-144653200 (-) NM_019464 - 6161 144657531 54673 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|KIAA0491|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) MGI:1859730 Mm.271775 3 3 H2 SH3GLB1 51100 NM_009899 - 44925 144698125 12722 Clca1 0 aaacaccattcccaagaccaact gatgggatatccaaggctctacg 5 9 8 1.1.2.1.8.9 BCBC-5A-0 14094365 P000877 Blank P000877 Buffer Control Negative Blank 5 9 9 1.1.2.1.9.9 BCBC-5A-0 14094384 P206012 Cfdp1 ProximalPromoter P206012 ProximalPromoter Unique Tile chr8:114741263-114742348 (-) NM_011801 - 280 114740983 23837 Cfdp1 AA408409|Bcnt|Bucentaur|Cfdp|cp27 craniofacial development protein 1 MGI:1344403 Mm.279437 8 8 E1 CFDP1 10428 NM_025781 - 21000 114763348 66817 D8Bwg1414e 0 gacatgcttaaatttgagggcac tcagagattaaaatgtcgctccc 5 9 10 1.1.2.1.10.9 BCBC-5A-0 14094403 P200165 1700020N01Rik ProximalPromoter P200165 ProximalPromoter Unique Tile chr10:21281600-21282557 (+) NM_183266 + 10 21282567 67692 1700020N01Rik MGC118229 RIKEN cDNA 1700020N01 gene MGI:1914942 Mm.54306 10 10 A3 0 ctctcagctacttctccagcacc gcccttgctttaacgaactttct 5 9 11 1.1.2.1.11.9 BCBC-5A-0 14094422 P204217 Cct2 ProximalPromoter P204217 ProximalPromoter Unique Tile chr10:116467839-116468899 (-) NM_007636 - 36 116467875 12461 Cct2 Cctb chaperonin subunit 2 (beta) MGI:107186 Mm.247788 10 10 D2 CCT2 10576 NM_146242 + 18375 116449464 237560 Lrrc10 1 tgtagctgactcttcagacgcac agaggagagaacccctcacaatc 5 9 12 1.1.2.1.12.9 BCBC-5A-0 14094441 P204584 Itga7 ProximalPromoter P204584 ProximalPromoter Unique Tile chr10:128335849-128336852 (+) NM_008398 + 86 128336766 16404 Itga7 [a]7|alpha7 integrin alpha 7 MGI:102700 Mm.179747 10 10 D3|10 72.0 cM ITGA7 3679 NM_015740 - 9376 128326473 14533 Bloc1s1 0 ctggaactctccctgtagaccaa aatctagctgatctttccgggtc 5 9 13 1.1.2.1.13.9 BCBC-5A-0 14094460 P205920 Thbs4 ProximalPromoter P205920 ProximalPromoter Unique Tile chr13:93895795-93896746 (-) NM_011582 - 284 93895511 21828 Thbs4 TSP-4 thrombospondin 4 MGI:1101779 Mm.20865 13 13 C3|13 51.0 cM THBS4 7060 0 ccccttttgtgtgttttcagttc gacacagaagtgtgctgaggaag 5 9 14 1.1.2.1.14.9 BCBC-5A-0 14094479 P206771 Serinc1 ProximalPromoter P206771 ProximalPromoter Unique Tile chr10:57221008-57222087 (-) NM_019760 - 144 57220864 56442 Serinc1 1500011D18Rik|AI315070|TMS-2|Tde1l|Tde2|Tms2|mKIAA1253 serine incorporator 1 MGI:1926228 Mm.29344 10 10 B4 SERINC1 57515 NM_008297 + 46108 57174900 15500 Hsf2 0 acaatggttcccagtcttccata gtggtcttcagcgatgctagatt 5 9 15 1.1.2.1.15.9 BCBC-5A-0 14094498 P200822 Slc2a12 ProximalPromoter P200822 ProximalPromoter Unique Tile chr10:22333366-22334313 (+) NM_178934 + 182 22334495 353169 Slc2a12 GLUT-12|Glut12 solute carrier family 2 (facilitated glucose transporter), member 12 MGI:3052471 Mm.374370 10 10 A3 SLC2A12 154091 0 gagttcgagagcactgggtgtat aaaaagacttgggactcaaaggc 5 9 16 1.1.2.1.16.9 BCBC-5A-0 14094517 P210217 Hbp1 ProximalPromoter P210217 ProximalPromoter Unique Tile chr12:32535742-32536716 (-) NM_177993;NM_153198; - 272 32535470 73389 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 MGI:894659 Mm.390461 12 12 A3 HBP1 26959 0 cagatgctatgagcaacctcctt tgggttagtagtctcagccttgc 5 9 17 1.1.2.1.17.9 BCBC-5A-0 14094536 P207185 Slc29a1 ProximalPromoter P207185 ProximalPromoter Unique Tile chr17:45059396-45060413 (-) NM_022880 - 2212 45057184 63959 Slc29a1 1200014D21Rik|AA407560|ENT1 solute carrier family 29 (nucleoside transporters), member 1 MGI:1927073 Mm.29744 17 17 C SLC29A1 2030 NM_008302 - 22554 45036842 15516 Hsp90ab1 0 gggatagtgcccagaaaaatacc ctgcgctcctaactcctacacat 5 9 18 1.1.2.1.18.9 BCBC-5A-0 14094555 P207458 ProximalPromoter P207458 ProximalPromoter No Hits Tile 2 ccaggactgaagagacaggtgtt ccactgctagggaacaaaggtag 5 9 19 1.1.2.1.19.9 BCBC-5A-0 14094214 P100708 Cd24a ProximalPromoter P100708 ProximalPromoter Unique Tile chr10:43266185-43267259 (+) NM_009846 + 324 43267583 12484 Cd24a HSA|Ly-52 CD24a antigen MGI:88323 Mm.29742 10 10 B2|10 26.0 cM CD24 934 NM_026411 - 36776 43229409 67851 1700021F05Rik 1 ggggttaggcgctattgagtc gcccaagtttcctttgtttcc 5 10 1 1.1.2.1.1.10 BCBC-5A-0 14094233 P101458 Ptbp2 ProximalPromoter P101458 ProximalPromoter Unique Tile chr3:119775526-119776430 (-) NM_019550 - 258 119775268 56195 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 MGI:1860489 Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000; Mm.29966; Mm.399000 3 3 G1 PTBP2 58155 0 ggggccaggttctgacttatc cctgggttctttctcttccgt 5 10 2 1.1.2.1.2.10 BCBC-5A-0 14094252 P102309 ProximalPromoter P102309 ProximalPromoter No Hits Tile 1 cgctctccaccgataaagtgtct ccttcatcggaagcttttcctaa 5 10 3 1.1.2.1.3.10 BCBC-5A-0 14094271 P103431 Sh3gl2 ProximalPromoter P103431 ProximalPromoter Unique Tile chr4:84675539-84676457 (+) NM_019535 + 229 84676686 20404 Sh3gl2 9530001L19Rik|AI120490|AW555077|B930049H17Rik|EEN-B1|SH3PA|Sh3d2a SH3-domain GRB2-like 2 MGI:700009 Mm.143603 4 4 C4|4 41.6 cM SH3GL2 6456 0 gctcactgctccgatattctgtt tctagactcaggtgacccagctc 5 10 4 1.1.2.1.4.10 BCBC-5A-0 14094290 P000619 Blank P000619 Buffer Control Negative Blank 5 10 5 1.1.2.1.5.10 BCBC-5A-0 14094309 P104727 Nck1 DistalPromoter P104727 DistalPromoter Unique Tile chr9:100356810-100358880 (-) NM_010878 - 1405 100355405 17973 Nck1 6330586M15Rik|D230010O13Rik|Nck non-catalytic region of tyrosine kinase adaptor protein 1 MGI:109601 Mm.181485; Mm.390219; Mm.181485; Mm.390219; Mm.181485; Mm.390219; Mm.181485; Mm.390219; Mm.181485; Mm.390219; Mm.181485; Mm.390219; Mm.181485; Mm.390219; Mm.181485; Mm.390219; Mm.181485; Mm.390219 9 9 E3.3 NCK1 4690 1 gcatagacatcgttgggaacaag catacataccgaagagaaggggg 5 10 6 1.1.2.1.6.10 BCBC-5A-0 14094328 P107418 Snai3 DistalPromoter P107418 DistalPromoter Unique Tile chr8:125348121-125350252 (-) NM_013914 - 1339 125346782 30927 Snai3 AI643946|Smuc|Zfp293 snail homolog 3 (Drosophila) MGI:1353563 Mm.103673 8 8 E1 SNAI3 333929 NM_001033142 - 11902 125362154 68718 Rnf166 0 ccaaattaatacgtggcccctaa agacaagctgtctgttgcctacg 5 10 7 1.1.2.1.7.10 BCBC-5A-0 14094347 P105601 Plce1 DistalPromoter P105601 DistalPromoter Unique Tile chr19:38586430-38588351 (+) NM_019588 + 989 38589340 74055 Plce1 4933403A21Rik|Plce|mKIAA1516 phospholipase C, epsilon 1 MGI:1921305 Mm.34031 19 19 D1 PLCE1 51196 1 tcccttcacaatgctcttctctg tttcagacatgcagagccaaaat 5 10 8 1.1.2.1.8.10 BCBC-5A-0 14094366 P000973 Blank P000973 Buffer Control Negative Blank 5 10 9 1.1.2.1.9.10 BCBC-5A-0 14094385 P205944 Trap1a ProximalPromoter P205944 ProximalPromoter End Repeat Tile chrX:134678901-134679980 (+) NM_011635 + 66 134680046 22037 Trap1a Tra-P1A tumor rejection antigen P1A MGI:98818 Mm.1297 X X F1|X 58.0 cM 1 acacacacacacacacacacaca acgagaacagtaagctcattggc 5 10 10 1.1.2.1.10.10 BCBC-5A-0 14094404 P200190 1700037H04Rik ProximalPromoter P200190 ProximalPromoter Unique Tile chr2:130851759-130852674 (-) NM_026091 - 298 130851461 67326 1700037H04Rik - RIKEN cDNA 1700037H04 gene MGI:1914576 Mm.27711 2 2 F3 NM_027641 - 13517 130866191 70997 Spef1 0 ggcaagaagatgggaagaaaagt gcggcagttttgtctaggagtta 5 10 11 1.1.2.1.11.10 BCBC-5A-0 14094423 P204241 Cebpd ProximalPromoter P204241 ProximalPromoter Unique Tile chr16:15800685-15801568 (+) NM_007679 + 705 15800863 12609 Cebpd - CCAAT/enhancer binding protein (C/EBP), delta MGI:103573 Mm.347407 16 16 A2|16 9.0 cM CEBPD 1052 NM_029354 - 23785 15776900 72083 2410018G20Rik 0 ctaagtaggtccaaaccgcacaa cttctgctgcatctcctggtt 5 10 12 1.1.2.1.12.10 BCBC-5A-0 14094442 P204608 Kpna4 ProximalPromoter P204608 ProximalPromoter Unique Tile chr3:69214681-69215684 (-) NM_008467 - 135 69214816 16649 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 MGI:1100848 Mm.30601 3 3 E2 KPNA4 3840 1 tgtcatggctcatagtcgtcatt tcttaaaattcttgagccgttgg 5 10 13 1.1.2.1.13.10 BCBC-5A-0 14094461 P205062 Tnfaip2 ProximalPromoter P205062 ProximalPromoter Unique Tile chr12:111889324-111890300 (+) NM_009396 + 2469 111892769 21928 Tnfaip2 Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 MGI:104960 Mm.255332 12 12 F1|12 56.0 cM TNFAIP2 7127 NM_028807 + 23928 111865396 74190 1200009I06Rik 0 ggctacctggaacttgctctgta gttcccaatagcctggaaagagt 5 10 14 1.1.2.1.14.10 BCBC-5A-0 14094480 P206795 Trip4 ProximalPromoter P206795 ProximalPromoter Unique Tile chr9:65683171-65684244 (-) NM_019797 - 115 65683056 56404 Trip4 4930558E03Rik|ASC-1|BB191711 thyroid hormone receptor interactor 4 MGI:1928469 Mm.208379 9 9 D TRIP4 9325 NM_026515 + 4084 65688328 68026 2810417H13Rik 0 aggcaagtgtactctcccacaag cttccggatctacgagtgagaaa 5 10 15 1.1.2.1.15.10 BCBC-5A-0 14094499 P200846 Abt1 ProximalPromoter P200846 ProximalPromoter Unique Tile chr13:23431457-23432468 (-) NM_013924 - 126 23431331 30946 Abt1 - activator of basal transcription MGI:1353636 Mm.292094 13 13 A3.2 ABT1 29777 NM_013483 - 40221 23472689 12231 Btn1a1 0 gcagaggtaaccaacagcaagtt agactggactgaggagaagggtt 5 10 16 1.1.2.1.16.10 BCBC-5A-0 14094518 P210241 Grwd1 ProximalPromoter P210241 ProximalPromoter Unique Tile chr7:45698891-45699917 (-) NM_153419 - 73 45698818 101612 Grwd1 A301|AI504353|GRWD|WDR28 glutamate-rich WD repeat containing 1 MGI:2141989 Mm.274847 7 7 B3 GRWD1 83743 NM_145963 - 6102 45692789 211480 Kcnj14 0 cctgagttctgtgtctgtccctt agacccgtcccactgtactgtta 5 10 17 1.1.2.1.17.10 BCBC-5A-0 14094537 P207119 Tmem8 ProximalPromoter P207119 ProximalPromoter Unique Tile chr17:25839720-25840673 (+) NM_021793 + 243 25840916 60455 Tmem8 AW490096|M83 transmembrane protein 8 (five membrane-spanning domains) MGI:1926283 Mm.304656 17 17 B1 TMEM8 58986 NM_024227 + 10458 25851131 68611 Mrpl28 0 tccttggggacattccttaattt atacgtgacatatacgcccgaag 5 10 18 1.1.2.1.18.10 BCBC-5A-0 14094556 P207482 1110033J19Rik ProximalPromoter P207482 ProximalPromoter Unique Tile chr6:148310788-148311697 (+) NM_025405 + 156 148311853 66184 1110033J19Rik AA407494|MGC59460 RIKEN cDNA 1110033J19 gene MGI:1913434 Mm.391542 6 6 G3 0 atactagggtctccacctctggg tggactctggatgaaaaacatga 5 10 19 1.1.2.1.19.10 BCBC-5A-0 14094215 P100732 Col6a1 ProximalPromoter P100732 ProximalPromoter Unique Tile chr10:76169687-76170775 (-) NM_009933 - 73 76169760 12833 Col6a1 AI747156|Col6a-1 procollagen, type VI, alpha 1 MGI:88459 Mm.2509 10 10 41.1 cM COL6A1 1291 0 gtccgtcagggtatccatcaa gggaaaggcagagtgagaggt 5 11 1 1.1.2.1.1.11 BCBC-5A-0 14094234 P101482 Ube2a ProximalPromoter P101482 ProximalPromoter Unique Tile chrX:33304535-33305570 (+) NM_019668 + 253 33305823 22209 Ube2a HHR6A|HR6A|Mhr6a ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae) MGI:102959 Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649; Mm.172835; Mm.395649 X X A3.2 UBE2A 7319 NM_029891 - 28774 33334344 77286 Nkrf 0 ccctgggagaagctctcattt aaaccttcaagtcccggtgat 5 11 2 1.1.2.1.2.11 BCBC-5A-0 14094253 P102615 Tcfap2c ProximalPromoter P102615 ProximalPromoter Unique Tile chr2:172239364-172240452 (+) NM_009335 + 366 172240818 21420 Tcfap2c AA409384|Ap-2.2 transcription factor AP-2, gamma MGI:106032 Mm.3629 2 2 H3-H4 TFAP2C 7022 0 aacttcctgggtctgttagggtc tgtcacttgagagttgaagacgc 5 11 3 1.1.2.1.3.11 BCBC-5A-0 14094272 P103455 Ykt6 ProximalPromoter P103455 ProximalPromoter Unique Tile chr11:5854623-5855536 (+) NM_019661 + 298 5855834 56418 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 homolog (S. Cerevisiae) MGI:1927550 Mm.294821 11 11 A1 YKT6 10652 NM_010292 - 5021 5849602 103988 Gck 0 accttgctcagattttagcctcc cattctgctagaaaaacaacccg 5 11 4 1.1.2.1.4.11 BCBC-5A-0 14094291 P000643 Blank P000643 Buffer Control Negative Blank 5 11 5 1.1.2.1.5.11 BCBC-5A-0 14094310 P104751 Prkcd DistalPromoter P104751 DistalPromoter Unique Tile chr14:29440799-29442683 (-) NM_011103 - 1478 29439321 18753 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta MGI:97598 Mm.2314 14 14 A3|14 11.0 cM PRKCD 5580 NM_177815 + 40700 29483383 328370 Rft1 0 aaacaggcccacattcaaatctt cacaaaaacccctaaccaacaca 5 11 6 1.1.2.1.6.11 BCBC-5A-0 14094329 P107362 Rbl2 DistalPromoter P107362 DistalPromoter Unique Tile chr8:93956892-93959086 (+) NM_011250 + 1127 93960213 19651 Rbl2 Rb2|p130 retinoblastoma-like 2 MGI:105085 Mm.235580 8 8 C5|8 40.99 cM RBL2 5934 2 agcctttgtaactccagtcccag aataggcacctcagccttttgtc 5 11 7 1.1.2.1.7.11 BCBC-5A-0 14094348 P105973 Kcmf1 DistalPromoter P105973 DistalPromoter Unique Tile chr6:72792386-72794201 (-) NM_019715 - 951 72791435 74287 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 MGI:1921537 Mm.29194 6 6 C3|6 30.5 cM KCMF1 56888 0 gctggaaaaggagctgagagttc aacaaagaataaatgagggggca 5 11 8 1.1.2.1.8.11 BCBC-5A-0 14094367 P001069 Blank P001069 Buffer Control Negative Blank 5 11 9 1.1.2.1.9.11 BCBC-5A-0 14094386 P205969 Scgb1a1 ProximalPromoter P205969 ProximalPromoter Unique Tile chr19:9155044-9156129 (-) NM_011681 - 71 9154973 22287 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) MGI:98919 Mm.2258 19 19 A SCGB1A1 7356 NM_025610 - 30248 9186377 66514 Asrgl1 0 taagcaaggcaaggttctgtagc cacaagaggtagagggcagtgat 5 11 10 1.1.2.1.10.11 BCBC-5A-0 14094405 P201960 1110034C04Rik ProximalPromoter P201960 ProximalPromoter Unique Tile chr12:101482240-101483280 (+) NM_211355 - 2210 101484450 68734 1110034C04Rik BC064465|mKIAA2010 RIKEN cDNA 1110034C04 gene MGI:1915984 Mm.87077 12 12 E KIAA2010 55671 0 tgcagaggtgattacgtgactgt agacagagaaaatgctgctttgg 5 11 11 1.1.2.1.11.11 BCBC-5A-0 14094424 P204266 Col13a1 ProximalPromoter P204266 ProximalPromoter Unique Tile chr10:61374496-61375522 (-) NM_007731 - 31 61374465 12817 Col13a1 - procollagen, type XIII, alpha 1 MGI:1277201 Mm.300931 10 10 B4|10 31.5 cM COL13A1 1305 2 ggagtgtctagaggcacaaggaa ggcgctacttcccaaactaatct 5 11 12 1.1.2.1.12.11 BCBC-5A-0 14094443 P204632 Lif ProximalPromoter P204632 ProximalPromoter Unique Tile chr11:4165326-4166410 (+) NM_008501;NM_001039537; + 687 4167097 16878 Lif - leukemia inhibitory factor MGI:96787 Mm.4964 11 11 A1-A2|11 0.25 cM LIF 3976 NM_001013365 + 28491 4136835 18413 Osm 0 gctttggtaaccctaattgtccc tggaagaaagtgagagtgaaggg 5 11 13 1.1.2.1.13.11 BCBC-5A-0 14094462 P205086 Tuba3 ProximalPromoter P205086 ProximalPromoter Unique Tile chr6:125251756-125252673 (-) NM_009446 - 106 125251650 22144 Tuba3 AI528779|MGC107295|M[a]3 tubulin, alpha 3 MGI:1095406 Mm.287784 6 6 F3 NM_010736 - 26800 125279473 17000 Ltbr 0 ggggattagagttgtagctgggt aatgattggatgtggctcaagtt 5 11 14 1.1.2.1.14.11 BCBC-5A-0 14094481 P206728 Kcnj15 ProximalPromoter P206728 ProximalPromoter Unique Tile chr16:95365993-95367091 (+) NM_001039057;NM_019664;NM_001039056; + 596 95366495 16516 Kcnj15 4930414N08Rik|AI182284|AI267127|IRKK|Kir4.2 potassium inwardly-rectifying channel, subfamily J, member 15 MGI:1310000 Mm.272239 16 16 C4|16 69.1 cM KCNJ15 3772 0 caattcccatcatcccatctaaa gtaggtgctgagggttcttcaaa 5 11 15 1.1.2.1.15.11 BCBC-5A-0 14094500 P200870 Trim52 ProximalPromoter P200870 ProximalPromoter Unique Tile chr14:104990747-104991683 (+) NM_198601 + 122 104991805 212085 Trim52 4921513B05Rik tripartite motif-containing 52 MGI:3045276 Mm.78128 14 14 E2.3 TRIM52 84851 0 tggctgttatctttcttggggta tcttaatggtattcatgcgaggg 5 11 16 1.1.2.1.16.11 BCBC-5A-0 14094519 P210265 Gnl3 ProximalPromoter P210265 ProximalPromoter Unique Tile chr14:29847842-29848869 (-) NM_178846;NM_153547; - 147 29847989 30877 Gnl3 BC037996|C77032|MGC46970|Ns guanine nucleotide binding protein-like 3 (nucleolar) MGI:1353651 Mm.88512 14 14 B|14 11.0 cM GNL3 26354 NM_029626 + 16951 29830891 76485 Glt8d1 1 gtcgtgacggtacaaatgagaag atcagatctacgcggaactcatc 5 11 17 1.1.2.1.17.11 BCBC-5A-0 14094538 P207143 Impg1 ProximalPromoter P207143 ProximalPromoter Unique Tile chr9:80262083-80263075 (-) NM_022016 - 170 80262253 63859 Impg1 A930015H12Rik|IMP150|SPACR interphotoreceptor matrix proteoglycan 1 MGI:1926876 Mm.422780 9 9 E1|9 42.5 cM IMPG1 3617 0 agcatggaggaccacactagaag ggagaaaaatccccaaaacaaag 5 11 18 1.1.2.1.18.11 BCBC-5A-0 14094557 P001620 Blank P001620 Buffer Control Negative Blank 5 11 19 1.1.2.1.19.11 BCBC-5A-0 14094216 P100756 Efnb2 ProximalPromoter P100756 ProximalPromoter Unique Tile chr8:8661076-8661984 (-) NM_010111 - 43 8661033 13642 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 MGI:105097 Mm.209813 8 8 A1.1|8 2.0 cM EFNB2 1948 NM_025726 + 212 8661772 66719 4921522P10Rik 1 agccgtggttcagtttttcaa aagcagtcaggagagcactgg 5 12 1 1.1.2.1.1.12 BCBC-5A-0 14094235 P101506 Pdcd10 ProximalPromoter P101506 ProximalPromoter Unique Tile chr3:75642937-75644036 (-) NM_019745 - 211 75642726 56426 Pdcd10 2410003B13Rik|MGC102058|Tfa15|Tfar15 programmed cell death 10 MGI:1928396 Mm.316473 3 3 E3 PDCD10 11235 NM_009250 + 537 75643499 20713 Serpini1 0 cttggatagactgtccgtggc ggaggggaggagatgaagaga 5 12 2 1.1.2.1.2.12 BCBC-5A-0 14094254 P102639 Ube2e1 ProximalPromoter P102639 ProximalPromoter Unique Tile chr14:17125221-17126223 (-) NM_009455 - 259 17124962 22194 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1, UBC4/5 homolog (yeast) MGI:107411 Mm.4429 14 14 A3 UBE2E1 7324 0 agatctctgtgaacttggatggc gactttgactcctccccaaaagt 5 12 3 1.1.2.1.3.12 BCBC-5A-0 14094273 P103389 Pofut1 ProximalPromoter P103389 ProximalPromoter Unique Tile chr2:152927281-152928272 (-) NM_080463;NM_001039055; + 4700 152932972 140484 Pofut1 KIAA0180|O-FucT-1|mKIAA0180 protein O-fucosyltransferase 1 MGI:2153207 Mm.293761 2 2 H2 POFUT1 23509 NM_018807 - 4527 152932799 54711 Plagl2 0 ctggagaacaaaggatccagaga gcagctgaggacagctatatggt 5 12 4 1.1.2.1.4.12 BCBC-5A-0 14094292 P000667 Blank P000667 Buffer Control Negative Blank 5 12 5 1.1.2.1.5.12 BCBC-5A-0 14094311 P104775 Rad9 DistalPromoter P104775 DistalPromoter Unique Tile chr19:4202662-4204674 (-) NM_011237 - 1059 4201603 19367 Rad9 - RAD9 homolog (S. pombe) MGI:1328356 Mm.277629 19 19 A RAD9A 5883 NM_019952 + 9717 4214391 56708 Clcf1 0 gcttgtgggtaaacttgcatgac taggggattaccagcatcctctc 5 12 6 1.1.2.1.6.12 BCBC-5A-0 14094330 P105744 Shcbp1 DistalPromoter P105744 DistalPromoter Unique Tile chr8:4780907-4782966 (-) NM_011369 - 1353 4779554 20419 Shcbp1 mPAL Shc SH2-domain binding protein 1 MGI:1338802 Mm.37801 8 8 A1.2 SHCBP1 79801 0 ctcagggacaaagacagacgcta taaggtggggagccatagaaaaa 5 12 7 1.1.2.1.7.12 BCBC-5A-0 14094349 P106247 Tcf19 DistalPromoter P106247 DistalPromoter Unique Tile chr17:35126063-35128228 (-) NM_025674 - 1256 35124807 106795 Tcf19 5730403J10Rik|AW495861 transcription factor 19 MGI:103180 Mm.11434 17 17 B1 TCF19 6941 NM_146248 + 835 35125228 240084 Cchcr1 0 tccacttcccttcctgatttctc ttgcctggttcattctatcagga 5 12 8 1.1.2.1.8.12 BCBC-5A-0 14094368 P001165 Blank P001165 Buffer Control Negative Blank 5 12 9 1.1.2.1.9.12 BCBC-5A-0 14094387 P205993 Zfp206 ProximalPromoter P205993 ProximalPromoter Unique Tile chr17:23327355-23328361 (-) NM_001033425 + 116 23328477 332221 Zfp206 BC068284|Znf206 zinc finger protein 206 MGI:3040700 Mm.270315 17 17 A3 ZNF206 84891 NM_011747 - 246 23327109 22654 Zfp13 0 acaaaccaagggaaaagtgatga gtaggacaaagccactagcagga 5 12 10 1.1.2.1.10.12 BCBC-5A-0 14094406 P201984 C030016D13Rik ProximalPromoter P201984 ProximalPromoter Unique Tile chr19:27496387-27497328 (+) NM_175354 + 161 27497167 107372 C030016D13Rik AW413347 RIKEN cDNA C030016D13 gene MGI:2147728 Mm.17942 19 19 C1 NM_177474 - 411 27496917 52874 D19Bwg1357e 0 atgcctaggaacacaaagcaaaa actccggtacagcttttaccctc 5 12 11 1.1.2.1.11.12 BCBC-5A-0 14094425 P204199 Car4 ProximalPromoter P204199 ProximalPromoter Unique Tile chr11:84772881-84773910 (+) NM_007607 + 124 84774034 12351 Car4 AW456718 carbonic anhydrase 4 MGI:1096574 Mm.1641 11 11 C CA4 762 NM_001005223 - 40330 84732551 448850 Znhit3 0 cccatctgtgagatgtaagggac gtccagtctcagatcggaaagaa 5 12 12 1.1.2.1.12.12 BCBC-5A-0 14094444 P204656 Max ProximalPromoter P204656 ProximalPromoter Unique Tile chr12:77880047-77880995 (-) NM_008558 - 978 77881025 17187 Max AA960152|AI875693 Max protein MGI:96921 Mm.268548 12 12 D1-D3|12 32.0 cM MAX 4149 0 gagtgagtgagcgagtgagtgag caaaaagaaccaaaactgaacgg 5 12 13 1.1.2.1.13.12 BCBC-5A-0 14094463 P205112 Yap1 ProximalPromoter P205112 ProximalPromoter Unique Tile chr9:8005076-8006071 (-) NM_009534 - 29 8005105 22601 Yap1 65kDa|AI325207|YAP65|Yap yes-associated protein 1 MGI:103262 Mm.221992 9 9 A1 YAP1 10413 NM_199017 - 37273 8043344 234912 9230110C19Rik 1 ctttataggctgaggtaggggga cgtcccaactgagacagaaactt 5 12 14 1.1.2.1.14.12 BCBC-5A-0 14094482 P206752 Rassf1 ProximalPromoter P206752 ProximalPromoter Unique Tile chr9:107411835-107412912 (+) NM_019713 + 156 107412756 56289 Rassf1 123F2|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family 1 Mm.12091 9 9 F1 NM_053253 + 6425 107405410 114602 Zmynd10 0 ctatatcctgcaagaggtgtggg catttcgaaggaaggtgtttcag 5 12 15 1.1.2.1.15.12 BCBC-5A-0 14094501 P200597 Slc19a3 ProximalPromoter P200597 ProximalPromoter Unique Tile chr1:82939067-82940025 (+) NM_030556 - 21595 82917472 80721 Slc19a3 A230084E24Rik|AI788884|MGC129326|MGC129327|ThTr2 solute carrier family 19 (sodium/hydrogen exchanger), member 3 MGI:1931307 Mm.261542 1 1 C5|1 51.0 cM SLC19A3 80704 0 gctcctgtctttcgttgatctgt acccatggtgtcagtaaagagga 5 12 16 1.1.2.1.16.12 BCBC-5A-0 14094520 P210290 Snx17 ProximalPromoter P210290 ProximalPromoter End Repeat Tile chr5:31468521-31469558 (+) NM_153680 + 320 31469878 266781 Snx17 5830447M19Rik|AI790646|D5Ertd260e|mKIAA0064 sorting nexin 17 MGI:2387801 Mm.6118 5 5 B1 SNX17 9784 NM_010122 - 49 31469607 13667 Eif2b4 2 actgaggctggaattcatcagag gatgcaccaagtggtagaagagc 5 12 17 1.1.2.1.17.12 BCBC-5A-0 14094539 P207167 Ptges ProximalPromoter P207167 ProximalPromoter Unique Tile chr2:30723106-30724186 (-) NM_022415 - 2159 30725265 64292 Ptges 2410099E23Rik|D2Ertd369e|cPGES|mPGES|mPGES-1 prostaglandin E synthase MGI:1927593 Mm.28768 2 2 B|2 24.0 cM PTGES 9536 0 cctactatgggatccttccatcc gaagctcacggtaaggaaactca 5 12 18 1.1.2.1.18.12 BCBC-5A-0 14094558 P001716 Blank P001716 Buffer Control Negative Blank 5 12 19 1.1.2.1.19.12 BCBC-5A-0 14094217 P100690 S100g ProximalPromoter P100690 ProximalPromoter Unique Tile chrX:158308642-158309546 (-) NM_009789 - 11 158308653 12309 S100g AU042539|CABP1|CaBP-D9K|Cabp9k|Calb3 S100 calcium binding protein G MGI:104528 Mm.6891 X X F4 S100G 795 0 tggtcatagcaagtccgaggt tgcaggagtcagacaggaaca 5 13 1 1.1.2.1.1.13 BCBC-5A-0 14094236 P101530 Tspan3 ProximalPromoter P101530 ProximalPromoter Unique Tile chr9:55959181-55960149 (-) NM_019793 - 4 55959185 56434 Tspan3 1700055K04Rik|TM4-A|Tm4sf8|Tspan-3 tetraspanin 3 MGI:1928098 Mm.28484 9 9 C TSPAN3 10099 0 tgcaggacagtggcagaagta gttcccaggcaactaagtccc 5 13 2 1.1.2.1.2.13 BCBC-5A-0 14094255 P102663 Atrx ProximalPromoter P102663 ProximalPromoter Unique Tile chrX:102132464-102133447 (-) NM_009530 - 403 102132061 22589 Atrx ATR2|DXHXS6677E|Hp1bp2|Hp1bp38|MRXS3|RAD54L|Rad54|XH2|Xnp|ZNF-HX alpha thalassemia/mental retardation syndrome X-linked homolog (human) MGI:103067 Mm.10141 X X D|X 43.8 cM ATRX 546 0 tctaagttctcaggtggcaaagg gataccaatgcacaagttccaca 5 13 3 1.1.2.1.3.13 BCBC-5A-0 14094274 P103413 ProximalPromoter P103413 ProximalPromoter Unique Tile chr4:57237908-57238956 (-) 0 agaccttgggcaagcatattaca aagtccaagagttcctcctgctt 5 13 4 1.1.2.1.4.13 BCBC-5A-0 14094293 P106662 Cyp2c29 DistalPromoter P106662 DistalPromoter Unique Tile chr19:39337288-39339258 (+) NM_007815 + 1155 39340413 13095 Cyp2c29 AHOH|AHOHase|AI159681|AI196010|Ah-2|Ahh-1|Cyp2c|P450-2C cytochrome P450, family 2, subfamily c, polypeptide 29 MGI:103238 Mm.20764 19 19 D2|19 27.0 cM 0 ctgcattagttcctgcttccaga tacatctcttgcattttgtgccc 5 13 5 1.1.2.1.5.13 BCBC-5A-0 14094312 P104799 Sdf4 DistalPromoter P104799 DistalPromoter Unique Tile chr4:154833434-154835330 (+) NM_011341 + 1383 154836713 20318 Sdf4 Cab45 stromal cell derived factor 4 MGI:108079 Mm.293517 4 4 E2 SDF4 51150 NM_080445 - 1095 154836425 117592 B3galt6 0 caggagattaggcagggttgagt gactgatggccagagacagctaa 5 13 6 1.1.2.1.6.13 BCBC-5A-0 14094331 P107404 Cldn5 DistalPromoter P107404 DistalPromoter Unique Tile chr16:18687112-18689137 (+) NM_013805 + 1272 18690409 12741 Cldn5 AI854493|MBEC1|MGC102088|Tmvcf claudin 5 MGI:1276112 Mm.22768 16 16 A3|16 11.65 cM CLDN5 7122 NM_009862 - 36057 18725194 12544 Cdc45l 0 agctcccaggaattgtaccagag aaactgttcttagaagacggcgg 5 13 7 1.1.2.1.7.13 BCBC-5A-0 14094350 P106268 Ddx18 DistalPromoter P106268 DistalPromoter Unique Tile chr1:123397010-123398867 (-) NM_025860 - 1536 123395474 66942 Ddx18 2310005B10Rik|MGC117904 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 MGI:1914192 Mm.391487; Mm.44219; Mm.391487; Mm.44219; Mm.391487; Mm.44219; Mm.391487; Mm.44219; Mm.391487; Mm.44219; Mm.391487; Mm.44219; Mm.391487; Mm.44219; Mm.391487; Mm.44219; Mm.391487; Mm.44219; Mm.391487; Mm.44219; Mm.391487; Mm.44219; Mm.391487; Mm.44219 1 1 E2 DDX18 8886 NM_010483 - 40999 123356011 15564 Htr5b 1 aatccaggaaccaagatgtctcc tctggatcttaaggctggaaggt 5 13 8 1.1.2.1.8.13 BCBC-5A-0 14094369 P000889 Blank P000889 Buffer Control Negative Blank 5 13 9 1.1.2.1.9.13 BCBC-5A-0 14094388 P206018 E430034L04Rik ProximalPromoter P206018 ProximalPromoter Unique Tile chr5:93159174-93160263 (-) NM_011816 - 316 93158858 23881 E430034L04Rik AA409541|G3BP|G3BP2|KIAA0660|mKIAA0660 RIKEN cDNA E430034L04 gene MGI:2442040 Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625; Mm.290530; Mm.426625 5 5 E2 G3BP2 9908 NM_177270;NM_016912; - 40956 93118218 53886 Cdkl2 0 attagaggtatgtagccccgagc ctttctcttgcagtgatgctgaa 5 13 10 1.1.2.1.10.13 BCBC-5A-0 14094407 P202008 C130057D23Rik ProximalPromoter P202008 ProximalPromoter Unique Tile chr4:111469661-111470756 (+) NM_177818 + 210 111470966 328505 C130057D23Rik - RIKEN cDNA C130057D23 gene MGI:3041190 Mm.226771 4 4 D1 2 ggaggaccagcagtctcaactaa cctgtttcatcatgacttgcttg 5 13 11 1.1.2.1.11.13 BCBC-5A-0 14094426 P204223 Cd37 ProximalPromoter P204223 ProximalPromoter End Repeat Tile chr7:45106864-45107781 (-) NM_007645 - 18 45106882 12493 Cd37 Tspan26 CD37 antigen MGI:88330 Mm.3689 7 7 B3|7 23.0 cM CD37 951 NM_011565 + 21612 45085252 21677 Tead2 1 cacacacacacacacacacacac gagactgagaggcacaaaggaaa 5 13 12 1.1.2.1.12.13 BCBC-5A-0 14094445 P204966 Slc12a4 ProximalPromoter P204966 ProximalPromoter Unique Tile chr8:108855386-108856367 (-) NM_009195 - 213 108855173 20498 Slc12a4 AW546649|KCC1|RBCKCC1 solute carrier family 12, member 4 MGI:1309465 Mm.292447 8 8 D3|8 53.0 cM SLC12A4 6560 NM_027960 - 12181 108868548 71854 Dpep3 0 gaaagcagttaaaggtgccagaa ggtagggttcctgtgtgtctttg 5 13 13 1.1.2.1.13.13 BCBC-5A-0 14094464 P205137 Zik1 ProximalPromoter P205137 ProximalPromoter Unique Tile chr7:9370484-9371582 (-) NM_009577 - 252 9370232 22775 Zik1 - zinc finger protein interacting with K protein 1 MGI:108070 Mm.49441 7 7 A1 ZIK1 284307 NM_134229 + 48781 9321703 171263 V1re10 0 aaaatagcttcagaaagtgcccc gcaaacaacccttttcatctgtc 5 13 14 1.1.2.1.14.13 BCBC-5A-0 14094483 P206777 Rab9 ProximalPromoter P206777 ProximalPromoter Unique Tile chrX:161823126-161824191 (-) NM_019773 - 633 161823759 56382 Rab9 2410064E05Rik|AI195561|Sid6061p RAB9, member RAS oncogene family MGI:1890695 Mm.25306 X X F5 RAB9A 9367 NM_001007577 - 30392 161854583 245695 A630018P17Rik 0 tgaccactgttagaagaaacgca ccagcattagtcagtcactgtgg 5 13 15 1.1.2.1.15.13 BCBC-5A-0 14094502 P200621 Cxxc1 ProximalPromoter P200621 ProximalPromoter Unique Tile chr18:74340501-74341589 (+) NM_028868 + 7 74341582 74322 Cxxc1 2410002I16Rik|5830420C16Rik|AI426635|Cgbp|PHF18 CXXC finger 1 (PHD domain) MGI:1921572 Mm.17537 18 18 E2 CXXC1 30827 NM_025581 - 7491 74333010 66468 2810433K01Rik 0 ctcgttttcatttcagggctatg taagacagcggagaccatacgtt 5 13 16 1.1.2.1.16.13 BCBC-5A-0 14094521 P210223 Pxt1 ProximalPromoter P210223 ProximalPromoter Unique Tile chr17:28669661-28670602 (-) NM_153390 - 189 28669850 69307 Pxt1 1700001G18Rik|Stepp peroxisomal, testis specific 1 MGI:1916557 Mm.107605 17 17 A3.3 NM_025888 + 9465 28680067 66989 Kctd20 0 accaagccacgttcatcttttta cttgttctaaaatggctgttggg 5 13 17 1.1.2.1.17.13 BCBC-5A-0 14094540 P207191 Folr4 ProximalPromoter P207191 ProximalPromoter Unique Tile chr9:14654251-14655295 (-) NM_176807;NM_022888; - 26 14654277 64931 Folr4 0910001L11Rik|C86255|Folbp3 folate receptor 4 (delta) MGI:1929185 Mm.86738 9 9 A2 LOC390243 390243 NM_010287 + 43605 14610646 14608 Gpr83 0 gttgggctgataaccattactgc tgcctccaagagagagagagaaa 5 13 18 1.1.2.1.18.13 BCBC-5A-0 14094559 P001812 Blank P001812 Buffer Control Negative Blank 5 13 19 1.1.2.1.19.13 BCBC-5A-0 14094218 P100714 Cdh1 ProximalPromoter P100714 ProximalPromoter Unique Tile chr8:109491365-109492370 (+) NM_009864 + 126 109492496 12550 Cdh1 AA960649|E-cadherin|Ecad|MGC107495|UVO|Um|uvomorulin cadherin 1 MGI:88354 Mm.35605 8 8 D|8 53.3 cM CDH1 999 1 gatgaggagggctggagagat tgtctgtagttggtggcatgg 5 14 1 1.1.2.1.1.14 BCBC-5A-0 14094237 P101836 Sdhc ProximalPromoter P101836 ProximalPromoter Unique Tile chr1:172987790-172988798 (-) NM_025321 - 513 172987277 66052 Sdhc 0610010E03Rik|AI316496|AU019277|MGC103103 succinate dehydrogenase complex, subunit C, integral membrane protein MGI:1913302 Mm.198138 1 1 H3 SDHC 6391 NM_008623 + 403 172987387 17528 Mpz 0 gcaagctgggttagagagggt aagccatatccccagcaagat 5 14 2 1.1.2.1.2.14 BCBC-5A-0 14094256 P102687 Apex1 ProximalPromoter P102687 ProximalPromoter Unique Tile chr14:49846378-49847322 (+) NM_009687 + 351 49846971 11792 Apex1 APE|Apex|HAP1|Ref-1 apurinic/apyrimidinic endonuclease 1 MGI:88042 Mm.203 14 14 C3|14 18.5 cM APEX1 328 NM_133676 - 388 49846766 66246 Osgep 0 caaggagagaccctgtctcaaaa tagtaaagccctgaacttgcctg 5 14 3 1.1.2.1.3.14 BCBC-5A-0 14094275 P103437 Ensa ProximalPromoter P103437 ProximalPromoter Unique Tile chr3:95709185-95710098 (+) NM_001026212;NM_019561; + 285 95710383 56205 Ensa 1700020C18Rik|2610007F17Rik|AI451924 endosulfine alpha MGI:1891189 Mm.241365 3 3 F2.1 ENSA 2029 NM_008562 + 34097 95744195 17210 Mcl1 0 ttctcccatacctcactgttggt gagccgggttaacatagaaatcc 5 14 4 1.1.2.1.4.14 BCBC-5A-0 14094294 P105674 Eef2k DistalPromoter P105674 DistalPromoter Unique Tile chr7:120646335-120648435 (+) NM_007908 + 6086 120642349 13631 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase MGI:1195261 Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795; Mm.25997; Mm.361795 7 7 F3 EEF2K 29904 0 gaggtggcagtagcaaggagatt aacagtagatggagcttcagggg 5 14 5 1.1.2.1.5.14 BCBC-5A-0 14094313 P104733 Nfkbia DistalPromoter P104733 DistalPromoter Unique Tile chr12:56411877-56413846 (-) NM_010907 - 1164 56410713 18035 Nfkbia AI462015|Nfkbi nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, alpha MGI:104741 Mm.170515 12 12 C1-C3 NFKBIA 4792 0 caatcctagcactcaggaggtca agggaaaattaaagcaacgtgga 5 14 6 1.1.2.1.6.14 BCBC-5A-0 14094332 P107426 Enpp2 DistalPromoter P107426 DistalPromoter Unique Tile chr15:54750848-54753024 (-) NM_015744 - 656 54750192 18606 Enpp2 ATX|Autotaxin|Npps2|PD-Ialpha|Pdnp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 MGI:1321390 Mm.250256; Mm.398173; Mm.250256; Mm.398173; Mm.250256; Mm.398173; Mm.250256; Mm.398173; Mm.250256; Mm.398173; Mm.250256; Mm.398173; Mm.250256; Mm.398173; Mm.250256; Mm.398173; Mm.250256; Mm.398173; Mm.250256; Mm.398173; Mm.250256; Mm.398173; Mm.250256; Mm.398173 15 15 D2 ENPP2 5168 0 ccttgcatggcttgtatcagaac aagtcagcttgtctgtggagtgg 5 14 7 1.1.2.1.7.14 BCBC-5A-0 14094351 P106290 Ube2g1 DistalPromoter P106290 DistalPromoter Unique Tile chr11:72419950-72422067 (+) NM_025985 + 1713 72423780 67128 Ube2g1 2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) MGI:1914378 Mm.340315 11 11 B4 UBE2G1 7326 0 acaacctgtggagttcggaaaat gttttggttggttggttttggtt 5 14 8 1.1.2.1.8.14 BCBC-5A-0 14094370 P000985 Blank P000985 Buffer Control Negative Blank 5 14 9 1.1.2.1.9.14 BCBC-5A-0 14094389 P203120 Anxa6 ProximalPromoter P203120 ProximalPromoter Unique Tile chr11:54877108-54878082 (-) NM_013472 - 271 54876837 11749 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 MGI:88255 Mm.265347 11 11 B1.3|11 29.5 cM ANXA6 309 NM_177471 - 43430 54921512 52570 Ccdc69 0 gatgcaggctctgctgataatct gccacccagaaatagaagtcaaa 5 14 10 1.1.2.1.10.14 BCBC-5A-0 14094408 P202033 Antxr1 ProximalPromoter P202033 ProximalPromoter Unique Tile chr6:87301614-87302624 (-) NM_054041 - 260 87301354 69538 Antxr1 2310008J16Rik|2810405N18Rik|Antrx1|Tem8 anthrax toxin receptor 1 MGI:1916788 Mm.232525 6 6 D1 ANTXR1 84168 NM_025466 - 13908 87316532 66283 Gkn1 0 gggacatgtaaaccctatcctcc gcacgcctttaattaatccttcc 5 14 11 1.1.2.1.11.14 BCBC-5A-0 14094427 P204247 Chuk ProximalPromoter P204247 ProximalPromoter Unique Tile chr19:44160928-44161895 (-) NM_007700 - 148 44160780 12675 Chuk AI256658|Chuk1|IKK-1|IKK-alpha|IKK1|IKK[a]|IKKalpha conserved helix-loop-helix ubiquitous kinase MGI:99484 Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277; Mm.3996; Mm.428277 19 19 C3|19 45.0 cM CHUK 1147 NM_145502 - 37868 44123060 226144 Spfh1 0 gagttttcagcatccctcgagta gcgtgcggttcctatttatttta 5 14 12 1.1.2.1.12.14 BCBC-5A-0 14094446 P204990 Sox4 ProximalPromoter P204990 ProximalPromoter Unique Tile chr13:28961271-28962357 (-) NM_009238 - 124 28961147 20677 Sox4 AA682046|Sox-4 SRY-box containing gene 4 MGI:98366 Mm.240627 13 13 A3-A5|13 20.0 cM SOX4 6659 0 aagcacagaagaggaggacaatg tggaacccgatgcaataataatc 5 14 13 1.1.2.1.13.14 BCBC-5A-0 14094465 P205068 Tnfsf8 ProximalPromoter P205068 ProximalPromoter Unique Tile chr4:63347453-63348530 (-) NM_009403 - 131 63347584 21949 Tnfsf8 CD153|CD30LG|Cd30l tumor necrosis factor (ligand) superfamily, member 8 MGI:88328 Mm.277092; Mm.4664; Mm.277092; Mm.4664; Mm.277092; Mm.4664; Mm.277092; Mm.4664; Mm.277092; Mm.4664; Mm.277092; Mm.4664 4 4 C1|4 32.2 cM TNFSF8 944 0 ctgaggttttcagcctgtaagga tctctcctcatctgattcggttc 5 14 14 1.1.2.1.14.14 BCBC-5A-0 14094484 P206801 Sirt1 ProximalPromoter P206801 ProximalPromoter Unique Tile chr10:62734412-62735506 (-) NM_019812 - 38 62734374 93759 Sirt1 AA673258|SIR2L1|Sir2|Sir2a|Sir2alpha sirtuin 1 ((silent mating type information regulation 2, homolog) 1 (S. cerevisiae) MGI:2135607 Mm.351459; Mm.393212; Mm.351459; Mm.393212; Mm.351459; Mm.393212; Mm.351459; Mm.393212; Mm.351459; Mm.393212; Mm.351459; Mm.393212; Mm.351459; Mm.393212; Mm.351459; Mm.393212; Mm.351459; Mm.393212; Mm.351459; Mm.393212 10 10 B4 SIRT1 23411 NM_013888 + 46467 62781973 30045 Dnajc12 0 tagccttggctgtcctagtgaac gggagatttaaaccccgtcac 5 14 15 1.1.2.1.15.14 BCBC-5A-0 14094503 P200647 Nr1i2 ProximalPromoter P200647 ProximalPromoter Unique Tile chr16:38213929-38214915 (-) NM_010936 - 133 38214062 18171 Nr1i2 PXR|PXR.1|PXR.2|PXR1|mPXR nuclear receptor subfamily 1, group I, member 2 MGI:1337040 Mm.8509 16 16 B3 NR1I2 8856 0 ctgcagaggaagagagaccagac gagaggctgaccatccaagtaga 5 14 16 1.1.2.1.16.14 BCBC-5A-0 14094522 P210247 Rnf113a1 ProximalPromoter P210247 ProximalPromoter Unique Tile chrX:33621772-33622757 (+) NM_153503 + 30 33622787 69942 Rnf113a1 2810428C21Rik|Rnf113a ring finger protein 113A1 MGI:1917192 Mm.307182 X X A3.3 RNF113A 7737 NM_019443 - 74 33622683 54405 Ndufa1 1 actgacttctcagccttctccct cagcggatcagataggaggagta 5 14 17 1.1.2.1.17.14 BCBC-5A-0 14094541 P209342 Wwc2 ProximalPromoter P209342 ProximalPromoter Unique Tile chr8:49488928-49489994 (-) NM_133791 - 440 49489368 52357 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 MGI:1261872 Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033; Mm.235074; Mm.390033 8 8 B1.2|8 30.0 cM WWC2 80014 1 gatagggacccgcctttacttt atgtagaaaaccttgccgtcgta 5 14 18 1.1.2.1.18.14 BCBC-5A-0 14094560 P001908 Blank P001908 Buffer Control Negative Blank 5 14 19 1.1.2.1.19.14 BCBC-5A-0 14094219 P100738 Ctsd ProximalPromoter P100738 ProximalPromoter Unique Tile chr7:142197673-142198750 (-) NM_009983 - 383 142197290 13033 Ctsd CD|CatD cathepsin D MGI:88562 Mm.231395 7 7 F5 CTSD 1509 NM_177265 - 16024 142181649 320802 6330512M04Rik 0 cagggacagaggcagctagaa tggagcctctctggactcttg 5 15 1 1.1.2.1.1.15 BCBC-5A-0 14094238 P101860 ProximalPromoter P101860 ProximalPromoter No Hits Tile 0 tgcacatgatcttgtccgttc ttggagagatcctgcggatta 5 15 2 1.1.2.1.2.15 BCBC-5A-0 14094257 P102621 Terf2 ProximalPromoter P102621 ProximalPromoter Unique Tile chr8:109985724-109986429 (-) NM_009353 - 61 109985663 21750 Terf2 TRF2 telomeric repeat binding factor 2 MGI:1195972 Mm.6402 8 8 D3|8 52.5 cM TERF2 7014 NM_025458 - 30951 109954773 66269 Tmed6 0 cacgatgtccacttgacagaaag ccgtagttcctcttgtgtctgct 5 15 3 1.1.2.1.3.15 BCBC-5A-0 14094276 P103461 Rapgef4 ProximalPromoter P103461 ProximalPromoter Unique Tile chr2:71780639-71781722 (+) NM_019688 + 403 71782125 56508 Rapgef4 1300003D15Rik|5730402K07Rik|Epac2|KIAA4040|mKIAA4040 Rap guanine nucleotide exchange factor (GEF) 4 MGI:1917723 Mm.196153 2 2 C3 RAPGEF4 11069 0 atttggagcaagcgttcagtaac tgatcccagctcacctttacagt 5 15 4 1.1.2.1.4.15 BCBC-5A-0 14094295 P106704 Ppm1g DistalPromoter P106704 DistalPromoter Unique Tile chr5:31498436-31500284 (-) NM_008014 - 1310 31497126 14208 Ppm1g AI385652|Fin13 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform MGI:106065 Mm.14501 5 5 B1|5 19.0 cM PPM1G 5496 NM_147201 + 17214 31517498 192292 Nrbp 0 aagctcgatgcctcagtataggg ctcattgccagtaattccagcac 5 15 5 1.1.2.1.5.15 BCBC-5A-0 14094314 P104757 Lgals3bp DistalPromoter P104757 DistalPromoter Unique Tile chr11:118219613-118221466 (-) NM_011150 - 1592 118218021 19039 Lgals3bp 90K|CyCAP|MAC-2BP|Ppicap lectin, galactoside-binding, soluble, 3 binding protein MGI:99554 Mm.3152 11 11 E LGALS3BP 3959 NM_001025617;NM_029502;NM_001025618; - 10418 118231884 76025 Cant1 0 ctctgtcttccctgtcctccatt tgggtttctgtccttggtgtcta 5 15 6 1.1.2.1.6.15 BCBC-5A-0 14094333 P107526 Tbpl1 DistalPromoter P107526 DistalPromoter Unique Tile chr10:22421629-22423608 (-) NM_011603 - 835 22420794 237336 Tbpl1 4732475G08|AW011832|AW491032|D18347|STD|TLF|TRF2|TRP|Tlp TATA box binding protein-like 1 MGI:1339946 Mm.86670 10 10 A3 TBPL1 9519 1 gcacattcctgtagcctcatttg acacacacacacacacacacagc 5 15 7 1.1.2.1.7.15 BCBC-5A-0 14094352 P106312 Decr1 DistalPromoter P106312 DistalPromoter Unique Tile chr4:15873657-15875797 (-) NM_026172 - 1003 15872654 67460 Decr1 1200012F07Rik|Decr|Nadph 2,4-dienoyl CoA reductase 1, mitochondrial MGI:1914710 Mm.24395 4 - DECR1 1666 NM_013752 + 9317 15885114 27354 Nbn 0 attccttggagccagaggtacag gtacagtccaggatctccagcct 5 15 8 1.1.2.1.8.15 BCBC-5A-0 14094371 P001081 Blank P001081 Buffer Control Negative Blank 5 15 9 1.1.2.1.9.15 BCBC-5A-0 14094390 P203144 Aldh1b1 ProximalPromoter P203144 ProximalPromoter Unique Tile chr4:45819301-45820222 (+) NM_028270 + 5 45820217 72535 Aldh1b1 2700007F14Rik|MGC101971 aldehyde dehydrogenase 1 family, member B1 MGI:1919785 Mm.331583 4 4 B2 ALDH1B1 219 NM_018741 - 27675 45847897 75426 Igfbpl1 0 aagcttgaagggaggcaataatc tctagtatcagcgttctccggtc 5 15 10 1.1.2.1.10.15 BCBC-5A-0 14094409 P201966 Tbc1d10b ProximalPromoter P201966 ProximalPromoter Unique Tile chr7:126999400-127000479 (-) NM_144522 - 216 126999616 68449 Tbc1d10b 1110003P22Rik|C87963 TBC1 domain family, member 10b MGI:1915699 Mm.397396; Mm.41420; Mm.397396; Mm.41420; Mm.397396; Mm.41420; Mm.397396; Mm.41420; Mm.397396; Mm.41420; Mm.397396; Mm.41420; Mm.397396; Mm.41420; Mm.397396; Mm.41420; Mm.397396; Mm.41420; Mm.397396; Mm.41420; Mm.397396; Mm.41420 7 7 F4 TBC1D10B 26000 NM_016754 + 2276 127002755 17907 Mylpf 1 cactgactattcttgctctggca gttccaccactaagtgcgatcc 5 15 11 1.1.2.1.11.15 BCBC-5A-0 14094428 P204272 Col1a2 ProximalPromoter P204272 ProximalPromoter Unique Tile chr6:4454978-4455885 (+) NM_007743 + 166 4455719 12843 Col1a2 AA960264|AI325291|Col1a-2|Cola-2|Cola2|oim procollagen, type I, alpha 2 MGI:88468 Mm.277792 6 6 A1|6 0.68 cM COL1A2 1278 0 gggggtacagacagagagagtca ttactgcaagcagcaacagagtc 5 15 12 1.1.2.1.12.15 BCBC-5A-0 14094447 P205014 Trim21 ProximalPromoter P205014 ProximalPromoter Unique Tile chr7:102439426-102440410 (-) NM_009277 - 183 102439243 20821 Trim21 Ro52|Ssa1 tripartite motif protein 21 MGI:106657 Mm.321227 7 - TRIM21 6737 NM_147101 + 11320 102428106 259105 Olfr549 0 agggagtttgggtcttcagtagg agagaggtcagaggtgcaagaaa 5 15 13 1.1.2.1.13.15 BCBC-5A-0 14094466 P205092 Ucp1 ProximalPromoter P205092 ProximalPromoter Unique Tile chr8:86179707-86180645 (+) NM_009463 + 179 86180466 22227 Ucp1 AI385626|Slc25a7|Ucp uncoupling protein 1 (mitochondrial, proton carrier) MGI:98894 Mm.4177 8 8 C2|8 38.0 cM UCP1 7350 NM_178736 - 41885 86222530 244548 Elmod2 0 tagaggactttctcagggtcacg gactcagccctgaagacaacagt 5 15 14 1.1.2.1.14.15 BCBC-5A-0 14094485 P206232 Pou5f1 ProximalPromoter P206232 ProximalPromoter Unique Tile chr17:35112925-35113987 (+) NM_013633 + 116 35114103 18999 Pou5f1 Oct-3|Oct-3/4|Oct-4|Oct3|Oct3/4|Oct4|Otf-3|Otf-4|Otf3|Otf3-rs7|Otf3g|Otf4 POU domain, class 5, transcription factor 1 MGI:101893 Mm.17031 17 17 B1|17 19.23 cM POU5F1 5460 NM_025674 - 10820 35124807 106795 Tcf19 2 ctcctcctaatcccgtctcctta gctatctgcctgtgtcttccaga 5 15 15 1.1.2.1.15.15 BCBC-5A-0 14094504 P200672 Smpd4 ProximalPromoter P200672 ProximalPromoter Unique Tile chr16:17531751-17532692 (+) NM_029945 + 224 17532916 77626 Smpd4 4122402O22Rik|mKIAA1418 sphingomyelin phosphodiesterase 4 MGI:1924876 Mm.34659 16 16 B1 SMPD4 55627 NM_144852 - 41517 17490234 224022 Slc7a4 0 gacctgtgaaagccctgagtcta cttttaatccatgcgttctggag 5 15 16 1.1.2.1.16.15 BCBC-5A-0 14094523 P210271 BC023814 ProximalPromoter P210271 ProximalPromoter Unique Tile chr3:88014483-88015433 (-) NM_153562 - 298 88014185 229503 BC023814 MGC38548 cDNA sequence BC023814 MGI:2387197 Mm.296008 3 3 F1 C1orf66 51093 NM_177663 + 807 88016240 229504 Isg20l2 0 caggagaatcgggagtaaaaggt agcatgatctcaccacagcatta 5 15 17 1.1.2.1.17.15 BCBC-5A-0 14094542 P209366 Hrh3 ProximalPromoter P209366 ProximalPromoter Unique Tile chr2:180033634-180034553 (-) NM_133849 - 4 180033630 99296 Hrh3 AW049250 histamine receptor H 3 MGI:2139279 Mm.285360 2 2 H4 HRH3 11255 NM_144500 + 14220 180048773 228983 Osbpl2 1 tgagttctgggtgaatgttctca ctgctcttgagcctaatctttgc 5 15 18 1.1.2.1.18.15 BCBC-5A-0 14094561 P001632 Blank P001632 Buffer Control Negative Blank 5 15 19 1.1.2.1.19.15 BCBC-5A-0 14094220 P100762 Nr2f6 ProximalPromoter P100762 ProximalPromoter Unique Tile chr8:74310609-74311674 (-) NM_010150 - 39 74310648 13864 Nr2f6 AV090102|COUP-TF3|EAR2|Erbal2 nuclear receptor subfamily 2, group F, member 6 MGI:1352453 Mm.28989; Mm.425540; Mm.28989; Mm.425540; Mm.28989; Mm.425540; Mm.28989; Mm.425540; Mm.28989; Mm.425540; Mm.28989; Mm.425540; Mm.28989; Mm.425540; Mm.28989; Mm.425540; Mm.28989; Mm.425540; Mm.28989; Mm.425540; Mm.28989; Mm.425540 8 8 B3.3|8 33.5 cM NR2F6 2063 NM_029865 + 10268 74300341 77090 9430098E02Rik 1 tcctgcatacaaagggtgctt acttagtggctcaccatccga 5 16 1 1.1.2.1.1.16 BCBC-5A-0 14094239 P101884 2310008M10Rik ProximalPromoter P101884 ProximalPromoter Unique Tile chr3:130698885-130699947 (-) NM_025509 - 312 130698573 66357 2310008M10Rik 5730557H03Rik RIKEN cDNA 2310008M10 gene MGI:1913607 Mm.300697 3 3 H1 DC2 58505 NM_001005859;NM_026724; - 18501 130718448 68436 1100001I22Rik 0 tgagaaggatctgggcaatgt acttgagagctgattggctgc 5 16 2 1.1.2.1.2.16 BCBC-5A-0 14094258 P102645 Ugdh ProximalPromoter P102645 ProximalPromoter Unique Tile chr5:65715215-65716119 (-) NM_009466 - 238 65714977 22235 Ugdh Udpgdh UDP-glucose dehydrogenase MGI:1306785 Mm.344831 5 5 C3.1|5 38.0 cM UGDH 7358 NM_024471 + 44516 65670699 79464 Lias 0 gatcattgcaagtaaaaggccag gtcatccttgtctgtgctccttc 5 16 3 1.1.2.1.3.16 BCBC-5A-0 14094277 P103767 Rpl15 ProximalPromoter P103767 ProximalPromoter Unique Tile chr14:17064040-17065081 (-) NM_025586 - 48 17064088 66480 Rpl15 2510008H07Rik|MGC107261 ribosomal protein L15 Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909 9 9 A3 NM_023526 + 219 17064259 69721 Nkiras1 0 cctttacacttggcatcaaaagc gacggatagacacacaaacacca 5 16 4 1.1.2.1.4.16 BCBC-5A-0 14094296 P106726 Gip DistalPromoter P106726 DistalPromoter Unique Tile chr11:95838188-95840275 (+) NM_008119 + 359 95840634 14607 Gip MGC129268|MGC129269 gastric inhibitory polypeptide MGI:107504 Mm.248452 11 11 D GIP 2695 NM_033568 + 10731 95851006 27681 Snf8 1 aggtagaggcaggtggatttctg aagccataggtgacttctgaggg 5 16 5 1.1.2.1.5.16 BCBC-5A-0 14094315 P104781 Rnase1 DistalPromoter P104781 DistalPromoter Unique Tile chr14:50069914-50072069 (-) NM_011271 - 1196 50068718 19752 Rnase1 AI574248|Rib-1|Rib1 ribonuclease, RNase A family, 1 (pancreatic) MGI:97919 Mm.235538 14 14 B-C1|14 18.5 cM RNASE1 6035 NM_053111 + 12141 50084210 93719 Ear6 0 tattcaagttggctgggctacaa gaggcttatccaagaggacgaaa 5 16 6 1.1.2.1.6.16 BCBC-5A-0 14094334 P107548 Vrk1 DistalPromoter P107548 DistalPromoter Unique Tile chr12:106407814-106409867 (+) NM_011705;NM_001029844;NM_001029843; + 1410 106411277 22367 Vrk1 51PK vaccinia related kinase 1 MGI:1261847 Mm.2981 12 12 F1 VRK1 7443 1 ttttggtttttcgagacagggtt tgtggtcagaatgctttgagtga 5 16 7 1.1.2.1.7.16 BCBC-5A-0 14094353 P106255 Uqcrfs1 DistalPromoter P106255 DistalPromoter Unique Tile chr13:30553997-30555921 (-) NM_025710 - 1209 30552788 66694 Uqcrfs1 4430402G14Rik|AI875505 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 MGI:1913944 Mm.181933 13 13 A3.3 UQCRFS1 7386 0 tggtctccacaggtaccagacat tccttagccagggaggatacttg 5 16 8 1.1.2.1.8.16 BCBC-5A-0 14094372 P001177 Blank P001177 Buffer Control Negative Blank 5 16 9 1.1.2.1.9.16 BCBC-5A-0 14094391 P203168 Hars ProximalPromoter P203168 ProximalPromoter Unique Tile chr18:36909288-36910275 (-) NM_008214 - 174 36909114 15115 Hars MMHRS histidyl-tRNA synthetase MGI:108087 Mm.10528 18 18 B2 HARS 3035 NM_080636 + 35 36909253 70791 Harsl 0 atacaggcaaagcaaagaccaga ggtagctttccagaaatcggact 5 16 10 1.1.2.1.10.16 BCBC-5A-0 14094410 P201990 Prkab1 ProximalPromoter P201990 ProximalPromoter Unique Tile chr5:116269166-116270128 (-) NM_031869 - 16261 116285427 19079 Prkab1 1300015D22Rik|AU021155|E430008F22 protein kinase, AMP-activated, beta 1 non-catalytic subunit MGI:1336167 Mm.200912 5 - PRKAB1 5564 NM_007708 + 40142 116229024 12704 Cit 0 agcaagtccccactagttcacag cagactccttcctgctctgtctc 5 16 11 1.1.2.1.11.16 BCBC-5A-0 14094429 P202638 Dcps ProximalPromoter P202638 ProximalPromoter Unique Tile chr9:34925474-34926531 (-) NM_027030 - 184 34925658 69305 Dcps 1700001E16Rik|AA408441 decapping enzyme, scavenger MGI:1916555 Mm.229110 9 9 A4 DCPS 28960 NM_054096 - 14522 34941053 117149 Tirap 0 gaaaagggctagcctgtacgaat cagactccctgagcactttttgt 5 16 12 1.1.2.1.12.16 BCBC-5A-0 14094448 P205038 Phlda1 ProximalPromoter P205038 ProximalPromoter Unique Tile chr10:110909375-110910519 (+) NM_009344 + 124 110910395 21664 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology-like domain, family A, member 1 MGI:1096880 Mm.3117 10 10 D1 PHLDA1 22822 NM_015781 + 24197 110885178 53605 Nap1l1 2 agtttcatagcacgacacacgaa ctcattaacttggggccttcc 5 16 13 1.1.2.1.13.16 BCBC-5A-0 14094467 P205118 Pcgf2 ProximalPromoter P205118 ProximalPromoter Unique Tile chr11:97515874-97516865 (-) NM_009545 - 446 97515428 22658 Pcgf2 Mel18|Rnf110|Zfp144|mel-18 polycomb group ring finger 2 MGI:99161 Mm.2418 11 11 C1-C3|11 58.4 cM PCGF2 7703 NM_011971 + 2658 97519523 26446 Psmb3 0 ataatcgagctctttggagggac tgacctcattccttcaggatgtt 5 16 14 1.1.2.1.14.16 BCBC-5A-0 14094486 P206256 Tcf4 ProximalPromoter P206256 ProximalPromoter Unique Tile chr18:69468730-69469812 (+) NM_013685 + 77 69469889 21413 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|Hnf-4|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4 transcription factor 4 MGI:98506 Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269; Mm.392703; Mm.392967; Mm.426371; Mm.426409; Mm.4269 18 - TCF4 6925 0 agcccataaatgtcccaattctt gtggtaaacagagcgcctagaga 5 16 15 1.1.2.1.15.16 BCBC-5A-0 14094505 P200603 5730437N04Rik ProximalPromoter P200603 ProximalPromoter Unique Tile chr17:5396831-5397826 (-) NM_027457 - 109 5396722 70544 5730437N04Rik 1110008A10Rik|2310046K16Rik RIKEN cDNA 5730437N04 gene MGI:1917794 Mm.46654 17 17 A1 C6orf35 55836 NM_175349 - 21582 5375249 106557 Ldhal6b 0 agaagtgctttacgacctgaacg cgcttaacactcttgcagtgaga 5 16 16 1.1.2.1.16.16 BCBC-5A-0 14094524 P210296 Pygb ProximalPromoter P210296 ProximalPromoter Unique Tile chr2:150476960-150478011 (+) NM_153781 + 225 150478236 110078 Pygb MGC36329 brain glycogen phosphorylase MGI:97828 Mm.222584 2 2 G3|2 84.0 cM PYGB 5834 NM_172117 + 36369 150440591 12497 Entpd6 0 taggtaggttgagtcctgccttg gcagcttccccatacctaagatt 5 16 17 1.1.2.1.17.16 BCBC-5A-0 14094543 P209390 Rbm28 ProximalPromoter P209390 ProximalPromoter Unique Tile chr6:29114870-29115835 (-) NM_133925;NM_026650; - 191 29114679 68272 Rbm28 2810480G15Rik|AI503051|MGC12075|MGC38664 RNA binding motif protein 28 MGI:2655711 Mm.40802 6 6 A3.3 RBM28 55131 NM_011829 - 46446 29162281 23917 Impdh1 0 ataactgtggtgggggttctttt gggaaacttgacatcaacagctt 5 16 18 1.1.2.1.18.16 BCBC-5A-0 14094562 P001728 Blank P001728 Buffer Control Negative Blank 5 16 19 1.1.2.1.19.16 BCBC-5A-0 14094221 P101068 Vdac2 ProximalPromoter P101068 ProximalPromoter Unique Tile chr14:20618564-20619463 (+) NM_011695 + 649 20620112 22334 Vdac2 Vdac6 voltage-dependent anion channel 2 MGI:106915 Mm.262327 14 14 A3|14 2.5 cM VDAC2 7417 NM_176925 + 17535 20636998 319486 A430057M04Rik 0 ccggcttaggaggagagtgat aagagaagcttcccctggttg 5 17 1 1.1.2.1.1.17 BCBC-5A-0 14094240 P101908 Mrpl51 ProximalPromoter P101908 ProximalPromoter Unique Tile chr6:125156512-125157573 (+) NM_025595 + 218 125157791 66493 Mrpl51 2610511M02Rik|CDA09|HSPC241|Mrp64 mitochondrial ribosomal protein L51 MGI:1913743 Mm.138749 6 6 F2 MRPL51 51258 NM_146171 - 359 125157214 68298 2810406C15Rik 0 ttgctctggggatcaaaagaa tgagttttgctggggcagtat 5 17 2 1.1.2.1.2.17 BCBC-5A-0 14094259 P102669 Zfp46 ProximalPromoter P102669 ProximalPromoter Unique Tile chr4:135560434-135561401 (+) NM_009557 + 2924 135558477 22704 Zfp46 AI426962|Zfp-46 zinc finger protein 46 MGI:99192 Mm.1504 4 4 D3|4 65.9 cM ZNF436 80818 NM_028871 + 21650 135583051 74326 Hnrpr 0 acttccttgagctcttgtccctt tagctccaggtccaatgagagac 5 17 3 1.1.2.1.3.17 BCBC-5A-0 14094278 P103791 2610040C18Rik ProximalPromoter P103791 ProximalPromoter Unique Tile chr4:148010293-148011338 (-) NM_027263 - 28943 147981350 69928 2610040C18Rik 2810407L01Rik RIKEN cDNA 2610040C18 gene MGI:1917178 Mm.260893 4 4 E2 NM_007745 - 39752 147970541 12854 Cort 0 aactaaaagtgtctgaccagcgg gaggagaacagggagacaactga 5 17 4 1.1.2.1.4.17 BCBC-5A-0 14094297 P106669 Cyp7b1 DistalPromoter P106669 DistalPromoter Unique Tile chr3:18436658-18438624 (-) NM_007825 - 1178 18435480 13123 Cyp7b1 AW261589|D3Ertd552e|hct-1 cytochrome P450, family 7, subfamily b, polypeptide 1 MGI:104978 Mm.316000 3 3 A1|3 1.0 cM CYP7B1 9420 0 aatcgaactgttgaaattccggt aagcagtgcagagccatttgtag 5 17 5 1.1.2.1.5.17 BCBC-5A-0 14094316 P104805 Sin3a DistalPromoter P104805 DistalPromoter Unique Tile chr9:56871156-56873233 (+) NM_011378 + 1279 56874512 20466 Sin3a AW553200|KIAA4126|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) MGI:107157 Mm.15755 9 9 B|9 30.0 cM SIN3A 25942 0 cctccctgagtagtgtgtgtgct aatttaggaaccctaaggccagc 5 17 6 1.1.2.1.6.17 BCBC-5A-0 14094335 P105771 Mgll DistalPromoter P105771 DistalPromoter Unique Tile chr6:88686616-88688802 (+) NM_011844 + 1325 88690127 23945 Mgll AA589436|Mgl monoglyceride lipase MGI:1346042 Mm.272197 6 6 D1 MGLL 11343 0 gtggagagatggctcagcagtta tatgtggctgtggagtctggaat 5 17 7 1.1.2.1.7.17 BCBC-5A-0 14094354 P106276 Rab5a DistalPromoter P106276 DistalPromoter Unique Tile chr17:52941521-52943271 (+) NM_025887 + 891 52944162 271457 Rab5a 2410015H04Rik|AI663973|AU021172 RAB5A, member RAS oncogene family MGI:105926 Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123; Mm.300065; Mm.329123 17 17 C|17 32.0 cM RAB5A 5868 NM_172497 - 13271 52928250 211482 Efhb 0 gcagggtaagaagagctgagagg atgtttgtggaatgaatgaggga 5 17 8 1.1.2.1.8.17 BCBC-5A-0 14094373 P203023 9830147P19Rik ProximalPromoter P203023 ProximalPromoter Unique Tile chr9:77441584-77442520 (+) NM_177238 + 164 77442356 320711 9830147P19Rik - RIKEN cDNA 9830147P19 gene MGI:2444582 Mm.138238 9 9 E1 NM_172925 + 19159 77422425 244923 D930047P17Rik 0 agtgggccaccaggaaaatatac cacctttaatcccatcactcagg 5 17 9 1.1.2.1.9.17 BCBC-5A-0 14094392 P203192 4930412M03Rik ProximalPromoter P203192 ProximalPromoter Unique Tile chr11:59931255-59932192 (-) NM_177098 - 152 59931407 320201 4930412M03Rik - RIKEN cDNA 4930412M03 gene MGI:2443570 Mm.72458 11 11 B1.3 NM_001037764;NM_009021; + 10048 59921207 19377 Rai1 1 acctactctcgtcctcctgtgtg cattatcctagtgaggacacccg 5 17 10 1.1.2.1.10.17 BCBC-5A-0 14094411 P202015 Ncald ProximalPromoter P202015 ProximalPromoter Unique Tile chr15:37737214-37738137 (-) NM_134094 - 218 37736996 52589 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta MGI:1196326 Mm.283370 15 15 B3.1|15 11.0 cM NCALD 83988 2 cagatccttgttaggtcacaccc tgcagaatgtcaccaaactctgt 5 17 11 1.1.2.1.11.17 BCBC-5A-0 14094430 P202662 Nek4 ProximalPromoter P202662 ProximalPromoter Unique Tile chr14:29779269-29780271 (+) NM_011849 + 223 29780494 23955 Nek4 - NIMA (never in mitosis gene a)-related expressed kinase 4 MGI:1344404 Mm.251494 14 14 B NEK4 6787 NM_008406 - 6983 29772286 16424 Itih1 0 taattctacactcaaggcggagc ttcctgcgttttggttctacatt 5 17 12 1.1.2.1.12.17 BCBC-5A-0 14094449 P204972 Slc22a12 ProximalPromoter P204972 ProximalPromoter Unique Tile chr19:6543142-6544052 (-) NM_009203 - 136 6543006 20521 Slc22a12 AI987855|OAT4L|Rst|Slc22al2|URAT1 solute carrier family 22 (organic anion/cation transporter), member 12 MGI:1195269 Mm.391146 19 19 A SLC22A12 116085 2 tgaacccaaaccagtcagtacct gacaacaccactgcagatgaaag 5 17 13 1.1.2.1.13.17 BCBC-5A-0 14094468 P205143 Ache ProximalPromoter P205143 ProximalPromoter Unique Tile chr5:137517882-137519083 (+) NM_009599 + 634 137519717 11423 Ache mE1a|mE1b|mE1c|mE1c-long|mE1d|mE1d'|mE1e acetylcholinesterase MGI:87876 Mm.255464 5 5 G2|5 77.0 cM ACHE 43 NM_027356 + 5352 137524435 70240 2700038N03Rik 0 tgtcggtctgtctgaatctacca cagtagagaccaagaagaggcca 5 17 14 1.1.2.1.14.17 BCBC-5A-0 14094487 P206280 Pdk4 ProximalPromoter P206280 ProximalPromoter Unique Tile chr6:5446410-5447463 (-) NM_013743 - 114 5446296 27273 Pdk4 AV005916 pyruvate dehydrogenase kinase, isoenzyme 4 MGI:1351481 Mm.235547 6 6 A1|6 0.63 cM PDK4 5166 0 tcataacaccccagtctcctcat cagctcagagaaagaactttggg 5 17 15 1.1.2.1.15.17 BCBC-5A-0 14094506 P200628 6330403K07Rik ProximalPromoter P200628 ProximalPromoter Unique Tile chr11:70849770-70850699 (-) NM_134022 - 120 70849650 103712 6330403K07Rik AI415455|UGS148 RIKEN cDNA 6330403K07 gene MGI:1918001 Mm.27768 11 11 B4 NM_025993 + 13651 70836119 67139 Mis12 0 ttgtgatgttctgaggggttttt tctgcccagaacactctttctct 5 17 16 1.1.2.1.16.17 BCBC-5A-0 14094525 P210120 Vps39 ProximalPromoter P210120 ProximalPromoter Unique Tile chr2:120044628-120045559 (-) NM_147153;NM_178851; - 77 120044551 269338 Vps39 A230065P22Rik|AW743070|Vam6|Vam6P|mVam6 vacuolar protein sorting 39 (yeast) MGI:2443189 Mm.246131 2 2 E5 VPS39 23339 NM_001024145 - 39022 120005606 271844 Pla2g4f 0 ctccagtgcacacataacagtcc atccataccagctgctcagagtc 5 17 17 1.1.2.1.17.17 BCBC-5A-0 14094544 P209415 Ankrd10 ProximalPromoter P209415 ProximalPromoter Unique Tile chr8:11635946-11637012 (-) NM_133971 - 285 11635661 102334 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 MGI:1921840 Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424; Mm.12459; Mm.395424 8 8 A1.1 ANKRD10 55608 NM_024271 - 41702 11678714 76413 1700016D06Rik 1 ccagcctggtctacagagtgagt taggcgtctggtggtgaagttag 5 17 18 1.1.2.1.18.17 BCBC-5A-0 14094563 P001728 Blank P001728 Buffer Control Negative Blank 5 17 19 1.1.2.1.19.17 BCBC-5A-0 14094222 P101092 Dmtf1 ProximalPromoter P101092 ProximalPromoter Unique Tile chr5:9168053-9168957 (-) NM_011806 - 328 9167725 23857 Dmtf1 Dimp|Dmp1 cyclin D binding myb-like transcription factor 1 MGI:1344415 Mm.22480 5 - DMTF1 9988 0 caataggaaccccaatgctca gaaaggtgacctccgtgagtg 5 18 1 1.1.2.1.1.18 BCBC-5A-0 14094241 P101842 Ndufa9 ProximalPromoter P101842 ProximalPromoter Unique Tile chr6:126814784-126815850 (-) NM_025358 - 40 126814744 66108 Ndufa9 1010001N11Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 MGI:1913358 Mm.29939 6 6 F3 NDUFA9 4704 NM_009650 + 2912 126818762 11642 Akap3 0 gctgggattataggcagggac cggggtcaaatggtatctcaa 5 18 2 1.1.2.1.2.18 BCBC-5A-0 14094260 P102693 Arg2 ProximalPromoter P102693 ProximalPromoter Unique Tile chr12:80048303-80049359 (+) NM_009705 + 304 80049663 11847 Arg2 AII|AU022422 arginase type II MGI:1330806 Mm.265929; Mm.3506; Mm.265929; Mm.3506; Mm.265929; Mm.3506; Mm.265929; Mm.3506; Mm.265929; Mm.3506 12 12 C3 ARG2 384 NM_029988 - 39793 80008510 110417 Pigh 0 atccagataaggatctccaagcc ggagacctcagtggaacttgaga 5 18 3 1.1.2.1.3.18 BCBC-5A-0 14094279 P103815 ProximalPromoter P103815 ProximalPromoter Unique Tile chr18:15974448-15975489 (+) 0 ggtcaacatttaacacactggca acaagctcacaggaaagaaatgc 5 18 4 1.1.2.1.4.18 BCBC-5A-0 14094298 P106691 Ephx2 DistalPromoter P106691 DistalPromoter Unique Tile chr14:65079830-65082027 (-) NM_007940 - 1233 65078597 13850 Ephx2 AW106936|Eph2 epoxide hydrolase 2, cytoplasmic MGI:99500 Mm.15295 14 14 D|14 32.5 cM EPHX2 2053 NM_144803 + 13042 65095069 110902 Chrna2 0 cagaatgtggactcagtgcctct gaaggaaggaaggaaggaaggag 5 18 5 1.1.2.1.5.18 BCBC-5A-0 14094317 P107180 DistalPromoter P107180 DistalPromoter No Hits Tile 0 atagcttggacagttccctggag cagctattttgtgagagcgttgg 5 18 6 1.1.2.1.6.18 BCBC-5A-0 14094336 P105585 Psmb2 DistalPromoter P105585 DistalPromoter Unique Tile chr4:126176584-126178700 (+) NM_011970 + 1269 126179969 26445 Psmb2 AU045357|AW108089|C7-I|D4Wsu33e proteasome (prosome, macropain) subunit, beta type 2 MGI:1347045 Mm.22233 4 4 D2.2|4 57.6 cM PSMB2 5690 0 aggggatctcgtagtcgtctttg cctctgaaggcacttcacacact 5 18 7 1.1.2.1.7.18 BCBC-5A-0 14094355 P106298 Nudcd2 DistalPromoter P106298 DistalPromoter Unique Tile chr11:40574387-40576261 (+) NM_026023 + 829 40577090 52653 Nudcd2 2700047N05Rik|D11Ertd603e NudC domain containing 2 MGI:1277103 Mm.276504 11 11 A5|11 23.0 cM NUDCD2 134492 NM_013552 - 574 40576835 15366 Hmmr 1 catgaccaaggaacaagttggag tgtagctgtcctcacacaccaga 5 18 8 1.1.2.1.8.18 BCBC-5A-0 14094374 P203047 D4Ertd429e ProximalPromoter P203047 ProximalPromoter Unique Tile chr4:148582067-148583136 (-) NM_177672;NM_001025106; - 231 148581836 230917 D4Ertd429e 9430091K04|AV028368 DNA segment, Chr 4, ERATO Doi 429, expressed MGI:1196277 Mm.266704 4 4 E2|4 76.4 cM RP13-15M17.2 199953 NM_027460 - 34847 148617983 70556 5730438N18Rik 0 cttcctgaaggtcctgagttcaa taccttaacgctaatccttgcca 5 18 9 1.1.2.1.9.18 BCBC-5A-0 14094393 P203126 Galnt11 ProximalPromoter P203126 ProximalPromoter Unique Tile chr5:24731736-24732713 (+) NM_144908 + 254 24732967 231050 Galnt11 A430075I06Rik|AI648252|E430002F06Rik UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 MGI:2444392 Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232; Mm.246718; Mm.425232 5 5 A3 GALNT11 63917 NM_026449 + 40192 24691544 67909 Galntl5 0 ctaccttagacctctgcttgcca gctgctttacattgacgggtatc 5 18 10 1.1.2.1.10.18 BCBC-5A-0 14094412 P202039 C230012O17Rik ProximalPromoter P202039 ProximalPromoter Unique Tile chr4:25057936-25058850 (-) NM_176944 - 223 25057713 319564 C230012O17Rik - RIKEN cDNA C230012O17 gene MGI:2442283 Mm.188368 4 4 A3 NM_030733 + 5198 25064048 81006 Gpr63 0 atccatgcacgtgagtacagaga ttttacccaggaaggaggtaagc 5 18 11 1.1.2.1.11.18 BCBC-5A-0 14094431 P202686 Creb1 ProximalPromoter P202686 ProximalPromoter Unique Tile chr1:64466270-64467239 (+) NM_009952;NM_133828; + 70 64467169 12912 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 MGI:88494 Mm.422634 1 1 C2|1 31.0 cM CREB1 1385 1 actataggaagagggctgaacgg tttattctctcccccacgtaaca 5 18 12 1.1.2.1.12.18 BCBC-5A-0 14094450 P204996 Serpina3k ProximalPromoter P204996 ProximalPromoter Unique Tile chr12:104738247-104739272 (+) NM_011458 + 274 104739546 20714 Serpina3k 1300001I07Rik|D12Rp54|MMCM2|MMSpi2|RP54|Spi-2|Spi2|contrapsin serine (or cysteine) peptidase inhibitor, clade A, member 3K MGI:98377 Mm.291569 12 12 E|12 51.5 cM NM_009253 + 48963 104788235 20717 Serpina3m 0 gctcaatgggttctcctagatca agtcagaagcaaaaccagaatgc 5 18 13 1.1.2.1.13.18 BCBC-5A-0 14094469 P202927 Agpat6 ProximalPromoter P202927 ProximalPromoter Unique Tile chr8:24674127-24675190 (-) NM_018743 - 236 24673891 102247 Agpat6 AU041707|AW545732|Tsarg7 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta) MGI:2142716 Mm.200898 8 8 A2 AGPAT6 137964 NM_024240 - 27994 24703184 109145 Gins4 2 atttgtgaaacggtgttctcagc cctgtctgagctgtgtccagaac 5 18 14 1.1.2.1.14.18 BCBC-5A-0 14094488 P206304 Slco1a1 ProximalPromoter P206304 ProximalPromoter Unique Tile chr6:141909278-141910319 (-) NM_013797 - 78 141909200 28248 Slco1a1 A530084B21|Oatp1|Slc21a1 solute carrier organic anion transporter family, member 1a1 MGI:1351891 Mm.103665 6 6 A3-A5 0 agccctcaagtaaattcaaaggg attgctgaggaaagtcaggacag 5 18 15 1.1.2.1.15.18 BCBC-5A-0 14094507 P200653 Rpn2 ProximalPromoter P200653 ProximalPromoter Unique Tile chr2:156969282-156970236 (+) NM_019642 + 274 156970510 20014 Rpn2 1300012C06Rik|AV261018|Rpn-2 ribophorin II MGI:98085 Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235; Mm.22130; Mm.384235 2 2 H1|2 91.0 cM RPN2 6185 NM_001039557 - 510 156970746 629499 4922505G16Rik 0 gactgctgtatggaggagtggtc tggtgagtgagggtttatccagt 5 18 16 1.1.2.1.16.18 BCBC-5A-0 14094526 P210145 3110023B02Rik ProximalPromoter P210145 ProximalPromoter Unique Tile chr11:120273303-120274266 (+) NM_152807 + 39 120274227 67291 3110023B02Rik - RIKEN cDNA 3110023B02 gene MGI:1914541 Mm.103384; Mm.264266; Mm.103384; Mm.264266; Mm.103384; Mm.264266; Mm.103384; Mm.264266; Mm.103384; Mm.264266 11 11 E2 MGC16597 339230 NM_025560 - 113 120274153 66431 1810049H13Rik 1 tccctatctgggaagtggacata gtaaccagtgctatgttcccagg 5 18 17 1.1.2.1.17.18 BCBC-5A-0 14094545 P209348 Dpp3 ProximalPromoter P209348 ProximalPromoter Unique Tile chr19:4928364-4929336 (-) NM_133803 - 126 4928238 75221 Dpp3 4930533O14Rik|C86324 dipeptidylpeptidase 3 MGI:1922471 Mm.234769 19 19 A DPP3 10072 NM_172835 - 13714 4943050 240518 Peli3 0 ggaaggtgtgttggatttcagtc acagttcctcccctcatcttctc 5 18 18 1.1.2.1.18.18 BCBC-5A-0 14094564 P001824 Cy3 Anchor P001824 Anchor Control Positive Cy3 Anchor 5 18 19 1.1.2.1.19.18 BCBC-5A-0 14094223 P101116 Sept3 ProximalPromoter P101116 ProximalPromoter Unique Tile chr15:82101100-82102087 (+) NM_011889 + 569 82102656 24050 Sept3 3110018K01Rik|AV154067|B530002E20Rik|Sep3 septin 3 MGI:1345148 Mm.309707 15 - SEPT3 55964 NM_025639;NM_178269; - 28587 82072513 66570 Cenpm 1 attaaaggcatgcaccaccac atccccagcagaggttagagc 5 19 1 1.1.2.1.1.19 BCBC-5A-0 14094242 P101866 Tmem9 ProximalPromoter P101866 ProximalPromoter Unique Tile chr1:137833371-137834346 (+) NM_025439 + 90 137834436 66241 Tmem9 1500015G18Rik|AW545782 transmembrane protein 9 MGI:1913491 Mm.41773 1 1 E4 TMEM9 252839 0 gtggatcacaaccatctgcaa cccggaggcttacaatctagg 5 19 2 1.1.2.1.2.19 BCBC-5A-0 14094261 P102999 Pkig ProximalPromoter P102999 ProximalPromoter Unique Tile chr2:163383978-163385028 (+) NM_001039390;NM_001039391;NM_011106; + 449 163385477 18769 Pkig PKIgamma protein kinase inhibitor, gamma MGI:1343086 Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512; Mm.10091; Mm.425512 2 2 H3|2 94.0 cM PKIG 11142 NM_012032 - 47406 163336572 26943 Serinc3 0 cctgtctgtcctggaactcactt ctgtttcatcactctggcttcct 5 19 3 1.1.2.1.3.19 BCBC-5A-0 14094280 P103839 3110049J23Rik ProximalPromoter P103839 ProximalPromoter Unique Tile chr10:62418402-62419592 (+) NM_026085 + 276 62419868 67307 3110049J23Rik Mawbp RIKEN cDNA 3110049J23 gene MGI:1914557 Mm.368563 10 10 B4 NM_026701 + 37381 62456973 68371 0610038K03Rik 1 ccaaatagggactaaaaggtcgg ctttgtgggatctattcccagtg 5 19 4 1.1.2.1.4.19 BCBC-5A-0 14094299 P105677 Flot2 DistalPromoter P105677 DistalPromoter Unique Tile chr11:77853395-77855356 (+) NM_001040403;NM_008028; + 1179 77854177 14252 Flot2 AI573412|Esa flotillin 2 MGI:103309 Mm.130227 11 11 B5|11 46.0 cM FLOT2 2319 NM_183286 + 4852 77848543 70451 2610209N15Rik 0 agccctgagaaaaccacagtttc cactgacacacgcacacatacaa 5 19 5 1.1.2.1.5.19 BCBC-5A-0 14094318 P107202 Gck DistalPromoter P107202 DistalPromoter Unique Tile chr11:5816579-5818557 (-) NM_010292 - 1452 5815127 103988 Gck GLK|Gk|HK4|HKIV|HXKP|MODY2 glucokinase MGI:1270854 Mm.220358 11 11 A1|11 1.0 cM GCK 2645 NM_022879 - 17797 5798782 17898 Myl7 0 ccacagtcaggaagcaaagagaa acagaaggtgccttagggatgag 5 19 6 1.1.2.1.6.19 BCBC-5A-0 14094337 P107534 Traf5 DistalPromoter P107534 DistalPromoter Unique Tile chr1:193794713-193796707 (-) NM_011633 - 1542 193793171 22033 Traf5 - Tnf receptor-associated factor 5 MGI:107548 Mm.389227 1 1 H6|1 105.0 cM TRAF5 7188 NM_144814 - 41804 193838511 214742 Rcor3 0 tcaagcccaaggaggttaaatgt cttgtggtgttgatcccagagtc 5 19 7 1.1.2.1.7.19 BCBC-5A-0 14094356 P106320 Fgfr1op2 DistalPromoter P106320 DistalPromoter Unique Tile chr6:146531713-146533780 (+) NM_026218 + 1324 146535104 67529 Fgfr1op2 1500031J01Rik FGFR1 oncogene partner 2 MGI:1914779 Mm.333499 6 6 G3 FGFR1OP2 26127 NM_138757 - 809 146534589 71177 4933424B01Rik 0 tagagctgagattttcttggggg ttgaactggcaccattactttgg 5 19 8 1.1.2.1.8.19 BCBC-5A-0 14094375 P203071 Gimap6 ProximalPromoter P203071 ProximalPromoter Unique Tile chr6:48637822-48638737 (-) NM_153175 - 8 48637830 231931 Gimap6 4833419H03Rik|FLJ00102|Ian6|MGC41522|mFLJ00102 GTPase, IMAP family member 6 MGI:1918876 Mm.321047 6 6 B2.3 GIMAP6 474344 NM_146167 + 9469 48648206 231932 Gimap7 0 aggagagccagagctacacagaa aggaaatgagcagaaacacaagc 5 19 9 1.1.2.1.9.19 BCBC-5A-0 14094394 P203150 Lcp2 ProximalPromoter P203150 ProximalPromoter Unique Tile chr11:33946191-33947124 (+) NM_010696 + 76 33947200 16822 Lcp2 AI323664|BB161688|SLP-76|twm lymphocyte cytosolic protein 2 MGI:1321402 Mm.265350 11 11 A4 LCP2 3937 0 gccttatgcaccaatgctttaac ttcctttaccacttcctctgctg 5 19 10 1.1.2.1.10.19 BCBC-5A-0 14094413 P203998 Hils1 ProximalPromoter P203998 ProximalPromoter Unique Tile chr11:94782779-94783715 (+) NM_018792 + 28 94783687 54388 Hils1 TISP64 histone H1-like protein in spermatids 1 MGI:2136691 Mm.30482 11 11 C HILS1 373861 NM_009161 - 8702 94792417 20391 Sgca 0 ggatagccaaggctacacagaga gggctcagagactggtgaagtta 5 19 11 1.1.2.1.11.19 BCBC-5A-0 14094432 P202710 A430060F13Rik ProximalPromoter P202710 ProximalPromoter Unique Tile chr11:94724317-94725305 (-) NM_183153 - 209 94724108 217122 A430060F13Rik C86086 RIKEN cDNA A430060F13 gene MGI:3026970 Mm.24063; Mm.255799; Mm.24063; Mm.255799; Mm.24063; Mm.255799; Mm.24063; Mm.255799; Mm.24063; Mm.255799; Mm.24063; Mm.255799; Mm.24063; Mm.255799; Mm.24063; Mm.255799; Mm.24063; Mm.255799; Mm.24063; Mm.255799; Mm.24063; Mm.255799; Mm.24063; Mm.255799 11 11 D NM_007742 + 27044 94752349 12842 Col1a1 1 cttgtcaggttctcctcctgaaa atgtaaaaggccaaagagaagcc 5 19 12 1.1.2.1.12.19 BCBC-5A-0 14094451 P205020 Stra8 ProximalPromoter P205020 ProximalPromoter Unique Tile chr6:34849047-34850138 (+) NM_009292 + 973 34851111 20899 Stra8 - stimulated by retinoic acid gene 8 MGI:107917 Mm.5171 6 6 B1 LOC346673 346673 NM_001013366 - 8064 34840983 101240 9530020G05Rik 0 gtgagctaccttcggttccctat ctagcgagtcctggtgtcatctt 5 19 13 1.1.2.1.13.19 BCBC-5A-0 14094470 P202951 Trpc4 ProximalPromoter P202951 ProximalPromoter Unique Tile chr3:54242776-54243758 (+) NM_016984 + 274 54244032 22066 Trpc4 CCE1|STRPC4|Trp4|Trrp4 transient receptor potential cation channel, subfamily C, member 4 MGI:109525 Mm.10100 3 3 D|3 28.6 cM TRPC4 7223 0 tcaacaaagcctccttactctgc ataaaggacccacaaacacctca 5 19 14 1.1.2.1.14.19 BCBC-5A-0 14094489 P206238 Rtn2 ProximalPromoter P206238 ProximalPromoter Unique Tile chr7:18439956-18440924 (+) NM_013648;NM_001025364; + 264 18441188 20167 Rtn2 MGC35990|MMS10-P|Ms10p|Nspl1 reticulon 2 (Z-band associated protein) MGI:107612 Mm.24142 7 7 A3|7 4.0 cM RTN2 6253 NM_177691 - 1385 18438571 232941 C79127 2 ccaaacccacatggtagaaagag gtgggatatgatgttctggggta 5 19 15 1.1.2.1.15.19 BCBC-5A-0 14094508 P200678 Moap1 ProximalPromoter P200678 ProximalPromoter Unique Tile chr12:103159716-103160721 (-) NM_022323 - 6 103159722 64113 Moap1 1700051B17Rik|1700127I11Rik|2510001G02Rik|4930435G24Rik|9130023M10Rik|AA987038|MAP-1|PNMA4 modulator of apoptosis 1 MGI:1915555 Mm.291222; Mm.347546; Mm.291222; Mm.347546; Mm.291222; Mm.347546; Mm.291222; Mm.347546; Mm.291222; Mm.347546; Mm.291222; Mm.347546; Mm.291222; Mm.347546; Mm.291222; Mm.347546; Mm.291222; Mm.347546; Mm.291222; Mm.347546 12 12 E MOAP1 64112 NM_025666 + 650 103159066 66622 5730410I19Rik 0 actttaagccaagcatggtggta gaaaaggatctgtttggcatttg 5 19 16 1.1.2.1.16.19 BCBC-5A-0 14094527 P210169 Stau1 ProximalPromoter P210169 ProximalPromoter Unique Tile chr2:166705458-166706368 (+) NM_011490 - 17954 166687504 20853 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen (RNA binding protein) homolog 1 (Drosophila) MGI:1338864 Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276; Mm.412812; Mm.73276 2 2 H3 STAU1 6780 2 cttcagacactccagaagaggga tggggcgttgtttagattagaaa 5 19 17 1.1.2.1.17.19 BCBC-5A-0 14094546 P209372 D4Wsu114e ProximalPromoter P209372 ProximalPromoter Unique Tile chr4:146712363-146713400 (-) NM_001025365 - 16 146712347 28010 D4Wsu114e AA553001|AI853621 DNA segment, Chr 4, Wayne State University 114, expressed MGI:106506 Mm.250504 4 4 E2|4 76.4 cM RP5-1077B9.4 60672 NM_010244 + 415 146712778 14349 Fv1 0 tttcctcagacaaggatggagag ggttgtcctaattggctaaggct 5 19 18 1.1.2.1.18.19 BCBC-5A-0 14094565 P001920 Cy3 Anchor P001920 Anchor Control Positive Cy3 Anchor 5 19 19 1.1.2.1.19.19 BCBC-5A-0 14094566 P100108 Cfl1 ProximalPromoter P100108 ProximalPromoter Unique Tile chr19:5488936-5489984 (+) NM_007687 + 540 5490524 12631 Cfl1 AA959946|Cof|cofilin cofilin 1, non-muscle MGI:101757 Mm.329655 19 19 A CFL1 1072 NM_027877 - 599 5488337 71711 Mus81 0 tgtctcaagctgagggacaca aacgtaattcatgggggaagg 6 1 1 1.1.2.2.1.1 BCBC-5A-0 14094585 P100948 ProximalPromoter P100948 ProximalPromoter Unique Tile chr11:118009988-118011026 (-) 0 ttgcctgtccttgttgaggat agagaacaggagggagatgcc 6 1 2 1.1.2.2.2.1 BCBC-5A-0 14094604 P101698 Gmfb ProximalPromoter P101698 ProximalPromoter Unique Tile chr14:45744391-45745325 (-) NM_022023 - 304 45744087 63985 Gmfb 3110001H22Rik|3110001O16Rik|AI851627|C79176|D14Ertd630e glia maturation factor, beta MGI:1927133 Mm.87312 14 14 C1|14 18.0 cM GMFB 2764 NM_026832 + 8782 45754107 68755 Cgrrf1 0 tccccagcttctacagatcca ctttcatccttgcacctgtcc 6 1 3 1.1.2.2.3.1 BCBC-5A-0 14094623 P102831 Ggh ProximalPromoter P102831 ProximalPromoter Duplication Tile chr4:19968517-19969539 (+) NM_010281 + 223 19969316 14590 Ggh gamma-GH gamma-glutamyl hydrolase MGI:1329035 Mm.20461 4 4 A3-A5 GGH 8836 NM_015767 + 32942 19935575 50500 Ttpa 1 caagcactttgtatcgagtgtgg catcagcataaggtcccattgat 6 1 4 1.1.2.2.4.1 BCBC-5A-0 14094642 P103581 Statip1 ProximalPromoter P103581 ProximalPromoter Unique Tile chr18:24746072-24747045 (+) NM_021448 + 41 24747004 58523 Statip1 AU023723|Elp2|StIP1 signal transducer and activator of transcription interacting protein 1 MGI:1889642 Mm.25298 18 18 A2 STATIP1 55250 NM_139143 - 425 24746497 106957 Slc39a6 1 ggtgaaaagttaaaccatcgcag cagcaaaacacatgagacacctc 6 1 5 1.1.2.2.5.1 BCBC-5A-0 14094661 P106648 Col9a2 DistalPromoter P106648 DistalPromoter Unique Tile chr4:120533873-120535786 (+) NM_007741 + 1180 120536966 12840 Col9a2 AI427499|Col9a-2 procollagen, type IX, alpha 2 MGI:88466 Mm.269384 4 4 D2.2|4 53.0 cM COL9A2 1298 NM_133716 - 18991 120514882 69780 Smap1l 0 ctctctggacctcatggaagaca gaccacaagcaaatcaagtgacc 6 1 6 1.1.2.2.6.1 BCBC-5A-0 14094680 P107137 DistalPromoter P107137 DistalPromoter Unique Tile chr5:136656110-136658184 (-) 0 attcaccagtgaggggctaagag tttgaaggcagcctgagttacag 6 1 7 1.1.2.2.7.1 BCBC-5A-0 14094699 P105237 Rqcd1 DistalPromoter P105237 DistalPromoter Unique Tile chr1:74447073-74448807 (+) NM_021383 + 9342 74439465 58184 Rqcd1 2610007F23Rik|AI593551|Fl10 rcd1 (required for cell differentiation) homolog 1 (S. pombe) MGI:1928902 Mm.291708 1 1 C3 RQCD1 9125 NM_148937 + 27397 74476204 18802 Plcd4 0 agcaccttcaccaaagactttcc atggtttgtatatgcttggccct 6 1 8 1.1.2.2.8.1 BCBC-5A-0 14094718 P106420 Nrg4 DistalPromoter P106420 DistalPromoter Unique Tile chr9:55082047-55084202 (-) NM_032002 - 323 55081724 83961 Nrg4 AI552600 neuregulin 4 MGI:1933833 Mm.430737 9 9 C NRG4 145957 NM_172923 + 40847 55125049 244886 AI118078 2 ccgtgtggtatgttcatccatct ggaaaaacagcattggtgtgaaa 6 1 9 1.1.2.2.9.1 BCBC-5A-0 14094737 P201835 Golga1 ProximalPromoter P201835 ProximalPromoter Unique Tile chr2:38887449-38888528 (-) NM_029793 - 29 38887478 76899 Golga1 0710001G09Rik|2210418B03Rik|AW107649|MGC91089|golgin-97 golgi autoantigen, golgin subfamily a, 1 MGI:1924149 Mm.131098 2 2 B GOLGA1 2800 1 cagattccataggcgttccaata ccagtagtgcacttgctgtgtg 6 1 10 1.1.2.2.10.1 BCBC-5A-0 14094756 P202210 Ankrd9 ProximalPromoter P202210 ProximalPromoter Unique Tile chr12:111426973-111427956 (-) NM_175207 - 145 111426828 74251 Ankrd9 2500003O20Rik ankyrin repeat domain 9 MGI:1921501 Mm.250989 12 12 F1 ANKRD9 122416 0 tctaagggcattgtggaaaagaa aaaacttcggagaaacttgaggg 6 1 11 1.1.2.2.11.1 BCBC-5A-0 14094775 P205672 Nfia ProximalPromoter P205672 ProximalPromoter Unique Tile chr4:97268241-97269335 (+) NM_010905 + 327 97269662 18027 Nfia 1110047K16Rik|9430022M17Rik|NF1-A nuclear factor I/A MGI:108056 Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646; Mm.31274; Mm.409646 4 4 C4-C6|4 45.8 cM NFIA 4774 NM_177023 - 731 97270066 319865 E130114P18Rik 1 tctggggagttttaaagaagggt actacttttcctcctccccatcc 6 1 12 1.1.2.2.12.1 BCBC-5A-0 14094794 P201378 B3galt2 ProximalPromoter P201378 ProximalPromoter Unique Tile chr1:145401744-145402794 (+) NM_020025 + 166 145402960 26878 B3galt2 - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 MGI:1349461 Mm.285580 1 1 F B3GALT2 8707 0 cctaaaccaagaaagcacactgg caagcattaggatgaaatggagg 6 1 13 1.1.2.2.13.1 BCBC-5A-0 14094813 P204753 Odf1 ProximalPromoter P204753 ProximalPromoter Unique Tile chr15:38162828-38163878 (+) NM_008757 + 87 38163791 18285 Odf1 - outer dense fiber of sperm tails 1 MGI:97424 Mm.252830 15 15 B2-C|15 9.9 cM ODF1 4956 0 ccctcctctgtaagagcacaaaa tgacctcacccaccctttaagta 6 1 14 1.1.2.2.14.1 BCBC-5A-0 14094832 P202590 Alas2 ProximalPromoter P202590 ProximalPromoter Unique Tile chrX:145887261-145888215 (+) NM_009653 + 55 145888160 11656 Alas2 ALAS|Alas-2 aminolevulinic acid synthase 2, erythroid MGI:87990 Mm.302724 X X F3|X 63.0 cM ALAS2 212 NM_029943 - 40608 145928823 77622 Apex2 0 attattagtagcccaccctccca aaagaacctcttacctgttgccc 6 1 15 1.1.2.2.15.1 BCBC-5A-0 14094851 P206654 Unc93b1 ProximalPromoter P206654 ProximalPromoter Unique Tile chr19:3933903-3934917 (+) NM_019449 + 307 3935224 54445 Unc93b1 Unc93b unc-93 homolog B1 (C. elegans) MGI:1859307 Mm.262094 19 19 A UNC93B1 81622 NM_026316 - 4187 3929716 67689 Aldh3b1 1 actcacacacacccacacatacc agggtttctctgtatagccctgg 6 1 16 1.1.2.2.16.1 BCBC-5A-0 14094870 P200307 Car14 ProximalPromoter P200307 ProximalPromoter Unique Tile chr3:95989982-95990886 (-) NM_011797 - 44 95990026 23831 Car14 AW536446 carbonic anhydrase 14 MGI:1344341 Mm.306954 3 3 F2.1 CA14 23632 NM_146104 + 10523 95979459 226548 Aph1a 0 ctcccctctctttctttggagtc ctctcttcctctctctgccctct 6 1 17 1.1.2.2.17.1 BCBC-5A-0 14094889 P209609 Dph1 ProximalPromoter P209609 ProximalPromoter Unique Tile chr11:75006820-75007855 (-) NM_144491 - 151 75006669 116905 Dph1 2310011M22Rik|4930488F09Rik|AW551873|Dph2l1|Ovca1 DPH1 homolog (S. cerevisiae) MGI:2151233 Mm.41496 11 11 B5|11 47.7 cM DPH1 1801 NM_177708 + 2139 75009994 237847 Rtn4rl1 0 tgaaagctagaacagaaggtgcc aaggtctggactctcaagcctct 6 1 18 1.1.2.2.18.1 BCBC-5A-0 14094908 P207746 Tomm34 ProximalPromoter P207746 ProximalPromoter Unique Tile chr2:163762785-163763774 (-) NM_025996 - 242 163762543 67145 Tomm34 2610100K07Rik|TOM34|Tomm34a|Tomm34b translocase of outer mitochondrial membrane 34 MGI:1914395 Mm.23173; Mm.392100; Mm.23173; Mm.392100; Mm.23173; Mm.392100; Mm.23173; Mm.392100; Mm.23173; Mm.392100; Mm.23173; Mm.392100; Mm.23173; Mm.392100; Mm.23173; Mm.392100 2 2 H3 TOMM34 10953 NM_021420 + 1818 163765592 58231 Stk4 1 ctcaggtttaacagcctccacag cgtggtcaacaagtttgaagatg 6 1 19 1.1.2.2.19.1 BCBC-5A-0 14094567 P100132 Cybb ProximalPromoter P100132 ProximalPromoter Unique Tile chrX:8626289-8627327 (-) NM_007807 - 51 8626238 13058 Cybb C88302|Cgd|Nox2|gp91|gp91phox cytochrome b-245, beta polypeptide MGI:88574 Mm.200362 X X A1.1 CYBB 1536 0 gtagagccctgcttgtgcagt tttggggcaataggtttcctt 6 2 1 1.1.2.2.1.2 BCBC-5A-0 14094586 P100882 Mcpt6 ProximalPromoter P100882 ProximalPromoter Unique Tile chr17:25092709-25093616 (+) NM_010781 + 533 25094149 17229 Mcpt6 AV011504|MMCP-6|Mcp-6 mast cell protease 6 MGI:96942 Mm.7409 17 17 A3.3|17 10.39 cM TPSAB1 7177 NM_012034 + 4567 25098183 26945 Tpsg1 0 gaggctggtagctttccaggt tttcaggctatggaaggcaga 6 2 2 1.1.2.2.2.2 BCBC-5A-0 14094605 P101722 Lima1 ProximalPromoter P101722 ProximalPromoter Unique Tile chr15:99648114-99649026 (-) NM_023063 - 8 99648106 65970 Lima1 1110021C24Rik|3526402A12Rik|D15Ertd366e|Eplin LIM domain and actin binding 1 MGI:1920992 Mm.33207 15 15 F1|15 60.4 cM LIMA1 51474 NM_028015 - 47565 99600549 71949 Lass5 0 gtttgtggcgtttggtttgat gtgaacagttactgccctgcc 6 2 3 1.1.2.2.3.2 BCBC-5A-0 14094624 P102855 Foxf1a ProximalPromoter P102855 ProximalPromoter Unique Tile chr8:123969532-123970607 (+) NM_010426 + 157 123970450 15227 Foxf1a AI450827|FREAC1|Foxf1|Freac-1|HFH-8|Hfh8 forkhead box F1a MGI:1347470 Mm.33897; Mm.390071; Mm.33897; Mm.390071; Mm.33897; Mm.390071; Mm.33897; Mm.390071 8 8 67.0 cM FOXF1 2294 NM_172761 - 23688 123994295 234814 Mthfsd 0 ctttcatgaatgagtgcacgaag gaaactggtagatctcgctgagg 6 2 4 1.1.2.2.4.2 BCBC-5A-0 14094643 P103605 Cxcl12 ProximalPromoter P103605 ProximalPromoter Unique Tile chr6:117132899-117133949 (+) NM_001012477;NM_021704;NM_013655; + 232 117134181 20315 Cxcl12 AI174028|PBSF|PBSF/SDF-1|SDF-1|Scyb12|Sdf1|Sdf1a|Sdf1b|TLSF|TLSF-a|TLSF-b|TPAR1 chemokine (C-X-C motif) ligand 12 MGI:103556 Mm.303231 6 6 F1|6 53.0 cM CXCL12 6387 0 cccttctttagtccctaggtgga tgtaaagaggctgggtcgtagag 6 2 5 1.1.2.2.5.2 BCBC-5A-0 14094662 P106748 Hdac1 DistalPromoter P106748 DistalPromoter Unique Tile chr4:129045845-129047805 (-) NM_008228 - 894 129044951 433759 Hdac1 HD1|Hdac1-ps|MGC102534|MGC118085|RPD3 histone deacetylase 1 MGI:108086 Mm.202504; Mm.387531; Mm.391033; Mm.202504; Mm.387531; Mm.391033; Mm.202504; Mm.387531; Mm.391033; Mm.202504; Mm.387531; Mm.391033; Mm.202504; Mm.387531; Mm.391033; Mm.202504; Mm.387531; Mm.391033; Mm.202504; Mm.387531; Mm.391033; Mm.202504; Mm.387531; Mm.391033; Mm.202504; Mm.387531; Mm.391033; Mm.202504; Mm.387531; Mm.391033 4 4 D2.2|4 59.0 cM HDAC1 3065 NM_010693 - 12871 129060676 16818 Lck 0 gcccaacagggttcagtattttc gatccatccagaaaatttgggtc 6 2 6 1.1.2.2.6.2 BCBC-5A-0 14094681 P107159 Dnmt1 DistalPromoter P107159 DistalPromoter Unique Tile chr9:20704686-20706611 (-) NM_010066 - 1411 20703275 13433 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MTase|Met-1|Met1 DNA methyltransferase (cytosine-5) 1 MGI:94912 Mm.128580 9 9 A3|9 5.0 cM DNMT1 1786 NM_010333 - 20481 20727092 14739 Edg5 1 ttcagcaggtagctgtacttggc aagaatgaccgaggaccagaaag 6 2 7 1.1.2.2.7.2 BCBC-5A-0 14094700 P105261 Carm1 DistalPromoter P105261 DistalPromoter Unique Tile chr9:21316769-21318854 (+) NM_021531 + 21467 21297387 59035 Carm1 MGC46828|Prmt4 coactivator-associated arginine methyltransferase 1 MGI:1913208 Mm.230844 9 - CARM1 10498 NM_178619 + 24269 21343123 69773 1810026J23Rik 0 ccatctctagaagggagttggga tgaagttcacagaaaggctggac 6 2 8 1.1.2.2.8.2 BCBC-5A-0 14094719 P106442 Apoa5 DistalPromoter P106442 DistalPromoter Unique Tile chr9:46016581-46018709 (+) NM_080434 + 1086 46019795 66113 Apoa5 1300007O05Rik|Apoav|RAP3 apolipoprotein A-V MGI:1913363 Mm.29738 9 9 B APOA5 116519 NM_011752 + 5451 46024160 22687 Zfp259 0 tgggaaattgaactcaggacctt cagggggatgtctgcctataatc 6 2 9 1.1.2.2.9.2 BCBC-5A-0 14094738 P201767 Gmip ProximalPromoter P201767 ProximalPromoter Unique Tile chr8:72736470-72737409 (+) NM_198101 + 266 72737675 78816 Gmip 5031419I10Rik Gem-interacting protein MGI:1926066 Mm.324305 8 8 B3.3 GMIP 51291 NM_020028 + 14008 72751417 53978 Edg4 0 tgtcctacagttctttttgggga gcaatgaaggactgcaataaacc 6 2 10 1.1.2.2.10.2 BCBC-5A-0 14094757 P202234 Zfp371 ProximalPromoter P202234 ProximalPromoter Unique Tile chr7:5845730-5846732 (+) NM_133204 + 21368 5825364 170734 Zfp371 MGC129408|MGC129409|Zfg1 zinc finger protein 371 MGI:2159640 Mm.155595 7 7 A1 NM_001024928 + 42934 5889666 384763 Zfp667 1 atagacctgtgacatcagacgca actgaagttcttatggtgcccaa 6 2 11 1.1.2.2.11.2 BCBC-5A-0 14094776 P205696 Hspa4l ProximalPromoter P205696 ProximalPromoter Unique Tile chr3:40841121-40842140 (+) NM_011020 + 1 40842141 18415 Hspa4l 94kDa|AI461691|APG-1|MGC117843|Osp94 heat shock protein 4 like MGI:107422 Mm.39330 3 3 B HSPA4L 22824 NM_178386 + 35641 40805480 73333 Slc25a31 1 tggaagagggattacacaaggaa ggacccactctctatcggaaaat 6 2 12 1.1.2.2.12.2 BCBC-5A-0 14094795 P201402 Lmbrd2 ProximalPromoter P201402 ProximalPromoter Unique Tile chr15:9066309-9067309 (+) NM_177178 + 142 9067451 320506 Lmbrd2 9930036E21Rik LMBR1 domain containing 2 MGI:2444173 Mm.259886 15 15 A1 LMBRD2 92255 NM_145468;NM_013787; - 12 9067321 27401 Skp2 0 attacctggaaagttctcccgac tacgagctaggctcggaactaca 6 2 13 1.1.2.2.13.2 BCBC-5A-0 14094814 P205549 Kcnma1 ProximalPromoter P205549 ProximalPromoter Unique Tile chr14:22803069-22804062 (-) NM_010610 - 10587 22792482 16531 Kcnma1 MaxiK|Slo|Slo1|mSlo|mSlo1 potassium large conductance calcium-activated channel, subfamily M, alpha member 1 MGI:99923 Mm.343607 14 14 A3 KCNMA1 3778 0 accaagcctgaggaacagtgtag atcaggatcctctctaggttggg 6 2 14 1.1.2.2.14.2 BCBC-5A-0 14094833 P202614 Commd8 ProximalPromoter P202614 ProximalPromoter Unique Tile chr5:72447554-72448571 (-) NM_178599 - 238 72447316 27784 Commd8 C77770|D5Buc26e|MGC106259 COMM domain containing 8 MGI:1343485 Mm.44223 5 5 C3.2|5 40.0 cM COMMD8 54951 NM_153389 + 33906 72482477 231287 Atp10d 0 tccagtgttgtctaaatcccgtt gacttttgctcggttgagactgt 6 2 15 1.1.2.2.15.2 BCBC-5A-0 14094852 P206679 Dgke ProximalPromoter P206679 ProximalPromoter Unique Tile chr11:88876910-88877831 (-) NM_019505 - 435 88876475 56077 Dgke C87606|DAGK6|DGK diacylglycerol kinase, epsilon MGI:1889276 Mm.153695 11 11 C DGKE 8526 NM_001001497 + 4349 88882180 414094 A930013B10Rik 2 ttaaatactggccaaggtgatgg ccaggtaggacaaagccaatg 6 2 16 1.1.2.2.16.2 BCBC-5A-0 14094871 P200331 Trip6 ProximalPromoter P200331 ProximalPromoter Unique Tile chr5:137543867-137544888 (-) NM_011639 - 162 137544029 22051 Trip6 - thyroid hormone receptor interactor 6 MGI:1343458 Mm.27063 5 5 G2 TRIP6 7205 NM_031405 - 6446 137537421 83701 Ars2 0 acagcccttaccttcctgtacct agggttactccactccagacaga 6 2 17 1.1.2.2.17.2 BCBC-5A-0 14094890 P209542 Mvd ProximalPromoter P209542 ProximalPromoter Unique Tile chr8:125329425-125330325 (-) NM_138656 - 55 125329480 192156 Mvd C78718 mevalonate (diphospho) decarboxylase MGI:2179327 Mm.28146 8 8 E1 MVD 4597 NM_176948 + 320 125329745 319574 9330133O14Rik 0 cattcaacagccacgattttaca accattaggtcctgaggcttttc 6 2 18 1.1.2.2.18.2 BCBC-5A-0 14094909 P207770 Lass4 ProximalPromoter P207770 ProximalPromoter Unique Tile chr8:4492607-4493595 (+) NM_026058 + 78 4493517 67260 Lass4 2900019C14Rik|Trh1 longevity assurance homolog 4 (S. cerevisiae) MGI:1914510 Mm.35511 8 8 A1.2 LASS4 79603 0 atctttgcacctcacaaaaccat cttacctggaggttcagaaagca 6 2 19 1.1.2.2.19.2 BCBC-5A-0 14094568 P100156 ProximalPromoter P100156 ProximalPromoter No Hits Tile 1 gggggaaaaggagaggaaact gggcaatttccaatacccaat 6 3 1 1.1.2.2.1.3 BCBC-5A-0 14094587 P100906 Nfkbib ProximalPromoter P100906 ProximalPromoter Unique Tile chr7:28475333-28476065 (-) NM_010908 - 49 28475284 18036 Nfkbib IKB-beta|IkB|IkBb|MGC36057 nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, beta MGI:104752 Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654; Mm.220333; Mm.379654 7 7 A3-B3 NFKBIB 4793 NM_022432 + 209 28475542 64383 Sirt2 2 tgctgagagttgagtgtggga gtactgcaccacagccaatca 6 3 2 1.1.2.2.2.3 BCBC-5A-0 14094606 P102028 Larp6 ProximalPromoter P102028 ProximalPromoter Unique Tile chr9:60510280-60511303 (+) NM_026235 + 177 60511126 67557 Larp6 5430431G03Rik|AI552438|MGC115805 La ribonucleoprotein domain family, member 6 MGI:1914807 Mm.44546 9 9 B LARP6 55323 NM_145616 - 24363 60485917 102747 Lrrc49 1 ttcccaaagaccaggtttcct agatcctccagatcctcagcc 6 3 3 1.1.2.2.3.3 BCBC-5A-0 14094625 P102879 Hsd17b7 ProximalPromoter P102879 ProximalPromoter Unique Tile chr1:171806338-171807257 (-) NM_010476 - 458 171805880 15490 Hsd17b7 AI266814 hydroxysteroid (17-beta) dehydrogenase 7 MGI:1330808 Mm.12882 1 1 H3 HSD17B7 51478 NM_001033185 + 40725 171765613 78465 1700084C01Rik 0 tcatctaactcagagctggtccc acctctcaggtcgctgtaatgag 6 3 4 1.1.2.2.4.3 BCBC-5A-0 14094644 P103629 Slc29a1 ProximalPromoter P103629 ProximalPromoter Unique Tile chr17:45056214-45057172 (-) NM_022880 - 240 45055974 63959 Slc29a1 1200014D21Rik|AA407560|ENT1 solute carrier family 29 (nucleoside transporters), member 1 MGI:1927073 Mm.29744 17 17 C SLC29A1 2030 NM_008302 - 19372 45036842 15516 Hsp90ab1 0 ctacagggtggccctttatctct agtgacaacagtgacagagcagg 6 3 5 1.1.2.2.5.3 BCBC-5A-0 14094663 P106769 Hoxb1 DistalPromoter P106769 DistalPromoter Unique Tile chr11:96178137-96180334 (+) NM_008266 + 1513 96181847 15407 Hoxb1 Hox-2.9|MGC124123 homeo box B1 MGI:96182 Mm.890 11 11 D|11 56.08 cM HOXB1 3211 NM_134032 + 10416 96167721 103889 Hoxb2 0 tcctcagctacataggaagcacg agctcattgatgtctcctcctcc 6 3 6 1.1.2.2.6.3 BCBC-5A-0 14094682 P107102 F13b DistalPromoter P107102 DistalPromoter Unique Tile chr1:141294243-141296081 (+) NM_031164 + 22056 141318137 14060 F13b Cf-13b|Cf13b coagulation factor XIII, beta subunit MGI:88379 Mm.30105 1 1 F|1 74.1 cM F13B 2165 NM_009791 + 23060 141271183 12316 Aspm 0 aaacattacagggcacgtcagaa acgcatcttaaacatggcttcaa 6 3 7 1.1.2.2.7.3 BCBC-5A-0 14094701 P105285 Perp DistalPromoter P105285 DistalPromoter Unique Tile chr10:18530705-18532747 (+) NM_022032 + 1739 18534486 64058 Perp 1110017A08Rik|KCP1|KRTCAP1|PIGPC1|THW PERP, TP53 apoptosis effector MGI:1929938 Mm.28209 10 10 A2 PERP 64065 0 agaggacacagggaagagtgctt gacgcacgtgctatccaaaataa 6 3 8 1.1.2.2.8.3 BCBC-5A-0 14094720 P105571 Hdlbp DistalPromoter P105571 DistalPromoter Unique Tile chr1:95310483-95312607 (-) NM_133808 - 1273 95309210 110611 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein MGI:99256 Mm.30012 1 1 D|1 55.3 cM HDLBP 3069 NM_010891 + 1034 95309449 18000 Sept2 2 ctggaggctgaggtacaaggatt agatggatttctgagttcgaggc 6 3 9 1.1.2.2.9.3 BCBC-5A-0 14094739 P201793 D12Ertd551e ProximalPromoter P201793 ProximalPromoter Unique Tile chr12:116722046-116723096 (+) NM_028731 + 134 116723230 52635 D12Ertd551e 2410017M09Rik|4921504I16Rik|CHR2SYT|KIAA1228 DNA segment, Chr 12, ERATO Doi 551, expressed MGI:1261845 Mm.273755 12 12 F2|12 59.2 cM FAM62B 57488 1 ttatgcctctgtgtgtgtgtgtg actgggatccactgttcagagac 6 3 10 1.1.2.2.10.3 BCBC-5A-0 14094758 P206135 Cadps ProximalPromoter P206135 ProximalPromoter Unique Tile chr14:11616420-11617343 (-) NM_012061 - 74 11616346 27062 Cadps AU067781|CAPS|CAPS1|MGC90712|mKIAA1121 Ca<2+>dependent activator protein for secretion MGI:1350922 Mm.260881 14 14 A2 CADPS 8618 0 tatgcgagcatacaagctgaaga attggcttaactctccagtgtcc 6 3 11 1.1.2.2.11.3 BCBC-5A-0 14094777 P205721 Pitx2 ProximalPromoter P205721 ProximalPromoter Unique Tile chr3:129204772-129205698 (+) NM_001042502;NM_011098;NM_001042504; + 260 129205958 18741 Pitx2 9430085M16Rik|Brx1|Brx1a|Brx1b|Munc30|Otlx2|Pitx2a|Pitx2b|Pitx2c|Ptx2|Rieg|solurshin paired-like homeodomain transcription factor 2 MGI:109340 Mm.246804 3 3 G3|3 57.7 cM PITX2 5308 0 ccccagtgcaaatctactgtttc aaggctattcggcttttggttag 6 3 12 1.1.2.2.12.3 BCBC-5A-0 14094796 P201426 9930028C20Rik ProximalPromoter P201426 ProximalPromoter Unique Tile chr1:132543694-132544714 (+) NM_178691 + 158 132544872 226418 9930028C20Rik Hshin7 RIKEN cDNA 9930028C20 gene MGI:2442596 Mm.106553 1 1 E4 NM_008825 - 334 132543360 18640 Pfkfb2 0 cttcgttcctgaatctccagcta aaacaaatgccaagagaggtcag 6 3 13 1.1.2.2.13.3 BCBC-5A-0 14094815 P205573 Ldb2 ProximalPromoter P205573 ProximalPromoter Unique Tile chr5:45087820-45088733 (-) NM_010698 - 47 45087867 16826 Ldb2 AI035351|AW146358|CLIM-1a|CLIM-1b|CLIM1|CLP-36|Ldb3 LIM domain binding 2 MGI:894670 Mm.25785 5 5 B3 LDB2 9079 0 tgcctcttggatggatttttaga gtacaaagtagacgcacgcacac 6 3 14 1.1.2.2.14.3 BCBC-5A-0 14094834 P202547 4933409G03Rik ProximalPromoter P202547 ProximalPromoter Unique Tile chr2:68382226-68383294 (+) NM_177651 + 43 68383251 227998 4933409G03Rik - RIKEN cDNA 4933409G03 gene MGI:3045336 Mm.67562 2 2 C1.3 0 tgtgctacggttagttcacctca agtgaggatcagagcatgaaagg 6 3 15 1.1.2.2.15.3 BCBC-5A-0 14094853 P206704 Extl1 ProximalPromoter P206704 ProximalPromoter Unique Tile chr4:133655902-133656855 (-) NM_019578 - 12047 133643855 56219 Extl1 D430033M16Rik exostoses (multiple)-like 1 MGI:1888742 Mm.30978 4 4 D3|4 60.0 cM EXTL1 2134 NM_133880 + 12691 133669546 100163 Pafah2 2 ctggcaactttatgctcacctct ctgacttctcaggcagctaggag 6 3 16 1.1.2.2.16.3 BCBC-5A-0 14094872 P200355 2810417H13Rik ProximalPromoter P200355 ProximalPromoter Unique Tile chr9:65687497-65688441 (+) NM_026515 + 42 65688399 68026 2810417H13Rik AA409629|MGC29306|Ns5apt9|Ns5atp9|mKIAA0101|p15(PAF) RIKEN cDNA 2810417H13 gene MGI:1915276 Mm.351273 9 9 C KIAA0101 9768 NM_019797 - 4441 65683056 56404 Trip4 0 gccctgaatagatttcattgctg gcaccatgttcacacaagaagag 6 3 17 1.1.2.2.17.3 BCBC-5A-0 14094891 P209566 Hexim1 ProximalPromoter P209566 ProximalPromoter Unique Tile chr11:102931200-102932294 (+) NM_138753 + 120 102932414 192231 Hexim1 7330426E13Rik|CLP-1|Clp1|HIS1 hexamethylene bis-acetamide inducible 1 MGI:2385923 Mm.8763 11 11 E1 HEXIM1 10614 NM_025988 + 13337 102917863 67131 Acbd4 0 cacctcatctctgtggatgacac atatagaagcttgtaagccccgc 6 3 18 1.1.2.2.18.3 BCBC-5A-0 14094910 P208369 Cpsf3l ProximalPromoter P208369 ProximalPromoter Unique Tile chr4:154712570-154713546 (+) NM_028020 + 164 154713382 71957 Cpsf3l 2410006F12Rik|AU044035 cleavage and polyadenylation specific factor 3-like MGI:1919207 Mm.259270 4 4 E2|4 83.0 cM CPSF3L 54973 NM_024472 - 306 154713240 79554 BC002216 0 accttgtgtttaggtgtcaggga ggaagatgcttaggactcggact 6 3 19 1.1.2.2.19.3 BCBC-5A-0 14094569 P100180 Ewsr1 ProximalPromoter P100180 ProximalPromoter Unique Tile chr11:4998916-4999998 (-) NM_007968 - 142 4999058 14030 Ewsr1 AU018891|Ews|Ewsh Ewing sarcoma breakpoint region 1 MGI:99960 Mm.142822 11 11 A1-A3 EWSR1 2130 NM_177370 + 169 5000167 279766 Rhbdd3 1 aaaccaaaaaccccaccaatc cttcactcagtcatccctgcc 6 4 1 1.1.2.2.1.4 BCBC-5A-0 14094588 P100930 Pftk1 ProximalPromoter P100930 ProximalPromoter Unique Tile chr5:5386082-5387047 (-) NM_011074 - 121 5386203 18647 Pftk1 mKIAA0834 PFTAIRE protein kinase 1 MGI:894318 Mm.389061 5 5 A1|5 0.0 cM PFTK1 5218 1 cagtgacattcctgtcaccca ttcatcttgccgatcttctcg 6 4 2 1.1.2.2.2.4 BCBC-5A-0 14094607 P102052 Paip2 ProximalPromoter P102052 ProximalPromoter Unique Tile chr18:35723285-35724227 (+) NM_026420 + 397 35724624 67869 Paip2 2310050K10Rik|AU045972 polyadenylate-binding protein-interacting protein 2 MGI:1915119 Mm.126534 18 18 B2 PAIP2 51247 NM_010771 + 25377 35697908 17184 Matr3 0 aatgcaatttgaagggtggtg ctcaggggcatatagcactcg 6 4 3 1.1.2.2.3.4 BCBC-5A-0 14094626 P102813 Fkbp5 ProximalPromoter P102813 ProximalPromoter Unique Tile chr17:28168604-28169635 (-) NM_010220 - 45073 28213677 14229 Fkbp5 51kDa|D17Ertd592e|Dit1|FKBP51 FK506 binding protein 5 MGI:104670 Mm.276405 17 17 A3.3|17 13.0 cM FKBP5 2289 0 aactttcagtactcggaacgctg gccctcatcagtagtcattgtcc 6 4 4 1.1.2.2.4.4 BCBC-5A-0 14094645 P103653 Anp32e ProximalPromoter P103653 ProximalPromoter Unique Tile chr3:96013613-96014518 (+) NM_023210 + 177 96014695 66471 Anp32e 2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|MGC11640|mLANP-L acidic (leucine-rich) nuclear phosphoprotein 32 family, member E MGI:1913721 Mm.218657 3 3 F2.1 ANP32E 81611 NM_011797 - 23569 95990044 23831 Car14 0 tttcctggcattgtagttatggg gttaattccgataggttcgggag 6 4 5 1.1.2.2.5.4 BCBC-5A-0 14094664 P106791 Il2 DistalPromoter P106791 DistalPromoter Unique Tile chr3:37318313-37320238 (-) NM_008366 - 811 37317502 16183 Il2 Il-2 interleukin 2 MGI:96548 Mm.14190 3 3 B-C|3 19.2 cM IL2 3558 0 gaaactcttgtgggaggtggagt tgcacatgtatgtgtgtgtgagc 6 4 6 1.1.2.2.6.4 BCBC-5A-0 14094683 P107123 DistalPromoter P107123 DistalPromoter No Hits Tile 0 atcctgtccctttgctcctcc acttttgcctgcacaagactgtt 6 4 7 1.1.2.2.7.4 BCBC-5A-0 14094702 P105814 C2 DistalPromoter P105814 DistalPromoter Unique Tile chr17:34491056-34493252 (-) NM_013484 - 937 34490119 12263 C2 - complement component 2 (within H-2S) MGI:88226 Mm.283217 17 17 B1|17 18.86 cM C2 717 NM_198886 + 9362 34502614 193736 Zbtb12 0 cctagcattcaggaagtcccagt cctctggacgcagttactttcct 6 4 8 1.1.2.2.8.4 BCBC-5A-0 14094721 P106484 Acat1 DistalPromoter P106484 DistalPromoter Unique Tile chr9:53373890-53375986 (-) NM_144784 - 1145 53372745 110446 Acat1 6330585C21Rik|Acat acetyl-Coenzyme A acetyltransferase 1 MGI:87870 Mm.293233 9 9 30.0 cM ACAT1 38 1 atctgactccacaaatgctctgc cttgcactagaatggctggctaa 6 4 9 1.1.2.2.9.4 BCBC-5A-0 14094740 P201817 Lrrtm2 ProximalPromoter P201817 ProximalPromoter Unique Tile chr18:35340920-35341842 (-) NM_178005 - 28 35340892 107065 Lrrtm2 AI851755|BB129880|C630011A14Rik|mKIAA0416 leucine rich repeat transmembrane neuronal 2 MGI:2389174 Mm.39900 18 18 B1 LRRTM2 26045 0 tagccaaggagtaggtgagatgc gttgcagagaagagcttctggag 6 4 10 1.1.2.2.10.4 BCBC-5A-0 14094759 P206159 ProximalPromoter P206159 ProximalPromoter No Hits Tile 0 ttgacccattttatagctgtccc ttctttctgtcaggactgtggtg 6 4 11 1.1.2.2.11.4 BCBC-5A-0 14094778 P205653 Myh6 ProximalPromoter P205653 ProximalPromoter Unique Tile chr14:53921039-53922082 (-) NM_010856 - 241 53920798 17888 Myh6 A830009F23Rik|AA517445|MGC118706|Myhc-a|Myhca myosin, heavy polypeptide 6, cardiac muscle, alpha MGI:97255 Mm.290003 14 14 C2|14 20.0 cM MYH6 4624 NM_080728 - 26538 53948620 140781 Myh7 0 atgagtgtgagtataaggcccca gatgggcagatagaggagagaca 6 4 12 1.1.2.2.12.4 BCBC-5A-0 14094797 P201450 Krt75 ProximalPromoter P201450 ProximalPromoter Unique Tile chr15:101401956-101402884 (-) NM_133357 - 18 101401938 109052 Krt75 4732468K03Rik|AA589387|Krt2-6hf|Krtcap1 keratin 75 MGI:1923500 Mm.106868 15 15 F2|15 58.75 cM KRT75 9119 NM_177717 - 10972 101390984 239673 4732456N10Rik 0 aaccctcacaggactcactcaag tccttagacttttatgggcctcc 6 4 13 1.1.2.2.13.4 BCBC-5A-0 14094816 P205598 M6pr ProximalPromoter P205598 ProximalPromoter Unique Tile chr6:122273549-122274462 (+) NM_010749 + 166 122274628 17113 M6pr CD-MPR|Mpr46 mannose-6-phosphate receptor, cation dependent MGI:96904 Mm.249225 6 6 F1|6 54.4 cM M6PR 4074 NM_016970 - 25097 122248452 50928 Klrg1 0 ggaaaaagtcagaagaaggggaa tcactcggagattgtcaagatca 6 4 14 1.1.2.2.14.4 BCBC-5A-0 14094835 P202572 2700019D07Rik ProximalPromoter P202572 ProximalPromoter Unique Tile chr10:33640771-33641761 (-) NM_028287 - 130 33640641 72580 2700019D07Rik MGC107205 RIKEN cDNA 2700019D07 gene MGI:1919830 Mm.248081 10 10 B1 C6orf113 221302 0 aaagtccactcattctcaggcag ccactccagatatgctaaaaccg 6 4 15 1.1.2.2.15.4 BCBC-5A-0 14094854 P201179 8430410K20Rik ProximalPromoter P201179 ProximalPromoter Unique Tile chr9:4375375-4376302 (+) NM_145609 + 7234 4383536 78100 8430410K20Rik - RIKEN cDNA 8430410K20 gene MGI:1925350 Mm.206549 9 9 A1 0 aaaataatttctcgggcagtggt ttggtccctagagacagtcttgc 6 4 16 1.1.2.2.16.4 BCBC-5A-0 14094873 P200379 Wdr8 ProximalPromoter P200379 ProximalPromoter Unique Tile chr4:152985113-152986103 (+) NM_021499 + 68 152986171 59002 Wdr8 2610044M17Rik|5330425N03Rik|Dd57 WD repeat domain 8 MGI:1891749 Mm.46508 4 4 E2 WDR8 49856 NM_011642 - 1105 152984008 22062 Trp73 0 gagctggaccgagcaatactaga cgagtttgagtcttaaaggggct 6 4 17 1.1.2.2.17.4 BCBC-5A-0 14094892 P209591 Dppa3 ProximalPromoter P209591 ProximalPromoter Unique Tile chr6:122591150-122592193 (+) NM_139218 + 83 122592110 73708 Dppa3 2410075G02Rik|MGC117617|MGC130308|MGC130309|PCG7|PGC7|Stella developmental pluripotency-associated 3 MGI:1920958 Mm.27982 6 6 F2 NM_008108 - 15460 122575690 14562 Gdf3 0 ataatcctagcacattggaggca gaggagtttcagggtccttcatt 6 4 18 1.1.2.2.18.4 BCBC-5A-0 14094911 P208393 Cnot2 ProximalPromoter P208393 ProximalPromoter Unique Tile chr10:115985626-115986713 (-) NM_001037848;NM_001037847;NM_001037846;NM_028082; - 5 115985621 72068 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650|MGC115808 CCR4-NOT transcription complex, subunit 2 MGI:1919318 Mm.351553 10 10 D2 CNOT2 4848 NM_183200 + 236 115985390 327824 5330438D12Rik 1 ctaccactcaaacatgaacagcg agcaagacctttaccctctgacc 6 4 19 1.1.2.2.19.4 BCBC-5A-0 14094570 P100114 Cirbp ProximalPromoter P100114 ProximalPromoter Unique Tile chr10:79569499-79570420 (+) NM_007705 + 549 79570969 12696 Cirbp Cirp|R74941 cold inducible RNA binding protein MGI:893588 Mm.17898 10 10 C1|10 44.0 cM CIRBP 1153 NM_027207 + 5652 79576072 69770 1600002K03Rik 1 gccagcctggtctacaaagtg cctcttctccgttcttgctca 6 5 1 1.1.2.2.1.5 BCBC-5A-0 14094589 P100954 Psme1 ProximalPromoter P100954 ProximalPromoter Unique Tile chr14:54531681-54532721 (+) NM_011189 + 157 54532564 19186 Psme1 AW413925|MGC113815|PA28a proteasome (prosome, macropain) 28 subunit, alpha MGI:1096367 Mm.830 14 14 C2-D1|14 22.5 cM PSME1 5720 NM_026808 + 1937 54529744 68680 1110028A07Rik 0 cccgcatattaacacttccca aaagcctctactccccactcg 6 5 2 1.1.2.2.2.5 BCBC-5A-0 14094608 P102076 Dcakd ProximalPromoter P102076 ProximalPromoter Unique Tile chr11:102813545-102814562 (-) NM_026551 - 19646 102833191 68087 Dcakd 3010024O21Rik|6720485C15Rik|AI849483|FLJ22955 dephospho-CoA kinase domain containing MGI:1915337 Mm.277449 11 11 E1 DCAKD 79877 NM_008707 + 30086 102844648 18107 Nmt1 0 gcaccctgttaaggacgtgag aggatgcaaaactcccaaggt 6 5 3 1.1.2.2.3.5 BCBC-5A-0 14094627 P102837 Gk2 ProximalPromoter P102837 ProximalPromoter Unique Tile chr5:97697202-97698153 (-) NM_010294 - 87 97697289 14626 Gk2 GKTA|Gk-rs2 glycerol kinase 2 MGI:1329027 Mm.61206 5 5 E3|5 53.0 cM GK2 2712 0 gtcggcttgaagacagagtgatt tagaaagcgagtggagttggttc 6 5 4 1.1.2.2.4.5 BCBC-5A-0 14094646 P103959 Apobec1 ProximalPromoter P103959 ProximalPromoter Unique Tile chr6:122556937-122557938 (-) NM_031159 - 11069 122568006 11810 Apobec1 Cdar1 apolipoprotein B editing complex 1 MGI:103298 Mm.3333 6 6 F1|6 54.5 cM APOBEC1 339 NM_008108 - 17666 122575604 14562 Gdf3 0 ccaagactgctaagggtgtctgt acagagccatcaatgctacacaa 6 5 5 1.1.2.2.5.5 BCBC-5A-0 14094665 P105687 Kcnn4 DistalPromoter P105687 DistalPromoter Unique Tile chr7:24076440-24077670 (+) NM_008433 + 1352 24079022 16534 Kcnn4 IK1|IKCA1|KCA4|SK4|mIKCa1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 MGI:1277957 Mm.9911 7 7 A3 KCNN4 3783 NM_028047 + 30719 24108389 71997 1500002O20Rik 2 accgtgaggtgaaaccctatgtt ggatgatatgaaccctttggagg 6 5 6 1.1.2.2.6.5 BCBC-5A-0 14094684 P107145 DistalPromoter P107145 DistalPromoter No Hits Tile 0 ctgctaaccccttcagctcctaa acaggcaaacactgctaaacagg 6 5 7 1.1.2.2.7.5 BCBC-5A-0 14094703 P105836 Psmb9 DistalPromoter P105836 DistalPromoter Unique Tile chr17:33798899-33801010 (-) NM_013585 - 1281 33797618 16912 Psmb9 Lmp-2|Lmp2 proteosome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) MGI:1346526 Mm.390983 17 17 B1|17 18.59 cM PSMB9 5698 NM_013683 + 467 33798432 21354 Tap1 1 aatgtaggagctgaggatctggg cccaaatgtgaaggtttctttcc 6 5 8 1.1.2.2.8.5 BCBC-5A-0 14094722 P106428 Tcfcp2 DistalPromoter P106428 DistalPromoter Unique Tile chr15:100381470-100383577 (-) NM_033476 - 1455 100380015 21422 Tcfcp2 CP-2|LBP-1c|LBP-1d|LSF|UBP-1 transcription factor CP2 MGI:98509 Mm.219040 15 15 F1|15 56.8 cM TFCP2 7024 NM_010127 - 30822 100414399 19009 Pou6f1 0 aaccaagcaatactggctgcata tgaatctaggaggcagacacagg 6 5 9 1.1.2.2.9.5 BCBC-5A-0 14094741 P201842 Mllt10 ProximalPromoter P201842 ProximalPromoter Unique Tile chr2:17981555-17982459 (+) NM_010804 + 9435 17973024 17354 Mllt10 Af10|B130021D15Rik|D630001B22Rik|KIAA4140|mKIAA4140 myeloid/lymphoid or mixed lineage-leukemia translocation to 10 homolog (Drosophila) MGI:1329038 Mm.209175 2 - MLLT10 8028 NM_028317 - 15352 17966203 72668 2810030E01Rik 2 tcaatgctgttaacctttggtga gagggcacacataatcaagcag 6 5 10 1.1.2.2.10.5 BCBC-5A-0 14094760 P206183 Hebp1 ProximalPromoter P206183 ProximalPromoter Unique Tile chr6:135134077-135135057 (-) NM_013546 - 247 135133830 15199 Hebp1 Hebp heme binding protein 1 MGI:1333880 Mm.378937 6 6 G1 HEBP1 50865 NM_028982 + 28687 135163744 74525 8430419L09Rik 0 tgatctgatgcagacaagctctc acaaaccgtgttcgttcttttgt 6 5 11 1.1.2.2.11.5 BCBC-5A-0 14094779 P205678 Nid1 ProximalPromoter P205678 ProximalPromoter Unique Tile chr13:13255012-13256029 (+) NM_010917 + 26213 13229816 18073 Nid1 A630025O17|Nid|entactin|entactin-1|nidogen-1 nidogen 1 MGI:97342 Mm.4691 13 13 A1|13 7.0 cM NID1 4811 0 ctgtgttagccttcccttccttt tctgctgccatctgaataatgaa 6 5 12 1.1.2.2.12.5 BCBC-5A-0 14094798 P203706 Spaca4 ProximalPromoter P203706 ProximalPromoter Unique Tile chr7:45594075-45595126 (-) NM_027055 - 220 45593855 69363 Spaca4 1700008E09Rik|AV043694|Samp14 sperm acrosome associated 4 MGI:1916613 Mm.45607 7 7 B3 SPACA4 171169 NM_001033170 + 4814 45589261 73813 4930403C10Rik 0 ggtctcacctcattttcaccatc tgtgtatgttcaaatttgccctg 6 5 13 1.1.2.2.13.5 BCBC-5A-0 14094817 P205623 Mettl1 ProximalPromoter P205623 ProximalPromoter Unique Tile chr10:126443807-126444834 (+) NM_010792 + 46 126444880 17299 Mettl1 2810012D02Rik methyltransferase-like 1 MGI:1339986 Mm.251593; Mm.392308; Mm.251593; Mm.392308; Mm.251593; Mm.392308; Mm.251593; Mm.392308; Mm.251593; Mm.392308; Mm.251593; Mm.392308; Mm.251593; Mm.392308; Mm.251593; Mm.392308 10 10 D3 METTL1 4234 NM_010009 + 6364 126451198 13115 Cyp27b1 0 gccttgcaggagaatagaggttt agcaaattctgtagcaccgtagg 6 5 14 1.1.2.2.14.5 BCBC-5A-0 14094836 P202596 Sec61a2 ProximalPromoter P202596 ProximalPromoter Unique Tile chr2:5812836-5813786 (-) NM_021305 - 211 5812625 57743 Sec61a2 - Sec61, alpha subunit 2 (S. cerevisiae) MGI:1931071 Mm.21435 2 2 A1 SEC61A2 55176 0 cctatgctgcctctcacaagttt aagggttttccttttcaaagctg 6 5 15 1.1.2.2.15.5 BCBC-5A-0 14094855 P201203 AU040377 ProximalPromoter P201203 ProximalPromoter Unique Tile chr15:7345780-7346865 (-) NM_178748 - 261 7345519 268780 AU040377 5930412K08 expressed sequence AU040377 Mm.203208 15 15 A1 0 ctggtttccctacgtgttttcac ggctggatcctaacccttaactt 6 5 16 1.1.2.2.16.5 BCBC-5A-0 14094874 P200313 2610510J17Rik ProximalPromoter P200313 ProximalPromoter Unique Tile chr8:119807338-119808286 (-) NM_028131 + 17 119808303 72155 2610510J17Rik AI426416|AW545024 RIKEN cDNA 2610510J17 gene MGI:1919405 Mm.23185 8 8 E1 NM_026844 - 45 119807383 66531 2310061C15Rik 0 agggcgtaacacatcaacaaagt cccctacaagaagcacagaaaga 6 5 17 1.1.2.2.17.5 BCBC-5A-0 14094893 P209615 Commd1 ProximalPromoter P209615 ProximalPromoter Unique Tile chr11:22882470-22883563 (-) NM_144514 - 186 22882284 17846 Commd1 AI256843|Murr1|U2/Mu COMM domain containing 1 MGI:109474 Mm.259903 11 11 A3.2|11 12.0 cM COMMD1 150684 NM_009837 + 7029 22890592 12464 Cct4 0 agggtttctctgtatagccctgg tgtttccttcttcactccgatgt 6 5 18 1.1.2.2.18.5 BCBC-5A-0 14094912 P208417 Oraov1 ProximalPromoter P208417 ProximalPromoter Unique Tile chr7:144723706-144724642 (+) NM_028184 + 59 144724583 72284 Oraov1 2210010N10Rik|TAOS1 oral cancer overexpressed 1 MGI:1919534 Mm.389995 7 7 F5 ORAOV1 220064 NM_008003 + 17766 144705940 14170 Fgf15 0 atttctgctgtttgaagagtggg tcgcattcctttcattctgtgta 6 5 19 1.1.2.2.19.5 BCBC-5A-0 14094571 P100138 Dbi ProximalPromoter P100138 ProximalPromoter Unique Tile chr1:121949010-121950036 (-) NM_001037999;NM_007830; - 385 121948625 13167 Dbi ACBD1|Acbp diazepam binding inhibitor MGI:94865 Mm.2785 1 1 E2 DBI 1622 NM_028439 + 270 121948740 73103 3110009E18Rik 0 catgcccaaaatgaacaacct cggaaaatccagggaagaatc 6 6 1 1.1.2.2.1.6 BCBC-5A-0 14094590 P101260 Usp21 ProximalPromoter P101260 ProximalPromoter Unique Tile chr1:173124062-173125068 (-) NM_013919 - 542 173124604 30941 Usp21 ESTM28|Usp16|Usp23|W53272 ubiquitin specific peptidase 21 MGI:1353665 Mm.27510 1 1 H3|1 92.6 cM USP21 27005 NM_008911 - 6227 173117835 19044 Ppox 0 tgcctgagcctacaaagaagc agcggattaaacgggtgatct 6 6 2 1.1.2.2.2.6 BCBC-5A-0 14094609 P102100 8430419L09Rik ProximalPromoter P102100 ProximalPromoter Unique Tile chr6:135162594-135163558 (+) NM_028982 + 186 135163744 74525 8430419L09Rik KIAA1467|mKIAA1467 RIKEN cDNA 8430419L09 gene MGI:1921775 Mm.34182 6 6 G1 KIAA1467 57613 NM_013546 - 28764 135133830 15199 Hebp1 0 tcttggtgcctgtgagtgaga tcatctctccccaacctgtgt 6 6 3 1.1.2.2.3.6 BCBC-5A-0 14094628 P102861 Cbx5 ProximalPromoter P102861 ProximalPromoter Unique Tile chr15:103067750-103068809 (+) NM_007626 - 100 103067850 12419 Cbx5 2610029O15Rik|C75991|HP1|Hp1a chromobox homolog 5 (Drosophila HP1a) MGI:109372 Mm.262059 15 15 F3 CBX5 23468 NM_001039129;NM_010447; + 290 103068519 15382 Hnrpa1 0 gagactctgccacttacccaaga ccacactccccagatcattagtc 6 6 4 1.1.2.2.4.6 BCBC-5A-0 14094647 P103983 Lrp1b ProximalPromoter P103983 ProximalPromoter Unique Tile chr2:42476040-42477086 (-) NM_053011 - 433 42475607 94217 Lrp1b 9630004P12Rik|LRP-DIT low density lipoprotein-related protein 1B (deleted in tumors) MGI:2151136 Mm.386831 2 2 B LRP1B 53353 0 tgcttggacagtgtagaaaacca aagaatcacgatagcagtcctgg 6 6 5 1.1.2.2.5.6 BCBC-5A-0 14094666 P106756 Foxn1 DistalPromoter P106756 DistalPromoter Unique Tile chr11:78203503-78205682 (-) NM_008238 - 750 78202753 15218 Foxn1 D11Bhm185e|Hfh11|MGC124316|MGC124317|Whn|nu|nude forkhead box N1 MGI:102949 Mm.4496 11 11 B5|11 45.0 cM FOXN1 8456 NM_022411 - 32698 78238380 20500 Slc13a2 0 tggccaggcttctttgatatgta cgctacggtgtcattgagtttct 6 6 6 1.1.2.2.6.6 BCBC-5A-0 14094685 P107166 Egf DistalPromoter P107166 DistalPromoter Unique Tile chr3:129748230-129750353 (-) NM_010113 - 892 129747338 13645 Egf AI790464 epidermal growth factor MGI:95290 Mm.366162 3 3 G3|3 65.2 cM EGF 1950 0 tcccactttctcccatgtctgta aattctggtggcttacttggctc 6 6 7 1.1.2.2.7.6 BCBC-5A-0 14094704 P105858 Trappc3 DistalPromoter P105858 DistalPromoter Unique Tile chr4:125761865-125763878 (+) NM_013718 + 830 125764708 27096 Trappc3 1110058K12Rik|AI835942|AU019197|Bet3 trafficking protein particle complex 3 MGI:1351486 Mm.8392 4 4 D2.2 TRAPPC3 27095 NM_144941 - 3278 125758587 245877 Rprc1 1 ctcaaagaaagtgcaatcatggg gtgctagctgaccaaacccttct 6 6 8 1.1.2.2.8.6 BCBC-5A-0 14094723 P106450 Eif3s3 DistalPromoter P106450 DistalPromoter Unique Tile chr15:51696674-51698859 (-) NM_080635 - 1117 51695557 68135 Eif3s3 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|MGC107627 eukaryotic translation initiation factor 3, subunit 3 (gamma) MGI:1915385 Mm.289800 15 15 D1 EIF3S3 8667 NM_030132 + 8710 51707569 78581 D530033C11Rik 0 aggacagccagggctatacagag gaatggaccttgttggctagctt 6 6 9 1.1.2.2.9.6 BCBC-5A-0 14094742 P203316 Pus7 ProximalPromoter P203316 ProximalPromoter Unique Tile chr5:23293916-23294817 (-) NM_178403 - 190 23293726 78697 Pus7 C330017I15Rik pseudouridylate synthase 7 homolog (S. cerevisiae) MGI:1925947 Mm.58660 5 5 A3 PUS7 54517 NM_177323 + 2991 23297808 72772 Rint1 0 cccaaggggttaaggaactactg aatgggagcttctttcacagcta 6 6 10 1.1.2.2.10.6 BCBC-5A-0 14094761 P206207 Mbd1 ProximalPromoter P206207 ProximalPromoter Unique Tile chr18:74392725-74393715 (+) NM_013594 + 43 74393672 17190 Mbd1 Cxxc3|PCM1 methyl-CpG binding domain protein 1 MGI:1333811 Mm.22522 18 18 E2|18 45.0 cM MBD1 4152 2 agttcgaaccctcccaactaaag tcttcttctcttcctcctccacc 6 6 11 1.1.2.2.11.6 BCBC-5A-0 14094780 P205702 Pck1 ProximalPromoter P205702 ProximalPromoter Unique Tile chr2:172795096-172796125 (+) NM_011044 + 98 172796027 18534 Pck1 AI265463|PEPCK|Pck-1 phosphoenolpyruvate carboxykinase 1, cytosolic MGI:97501 Mm.266867 2 2 C1-qter|2 103.0 cM PCK1 5105 0 ctccaagggtgatggtgtctaac aatgaccctgcctacctttcttc 6 6 12 1.1.2.2.12.6 BCBC-5A-0 14094799 P203730 4921530L21Rik ProximalPromoter P203730 ProximalPromoter Unique Tile chr14:94763477-94764432 (+) NM_025733 + 33 94764399 66732 4921530L21Rik - RIKEN cDNA 4921530L21 gene MGI:1913982 Mm.75060 14 14 E2.1 0 tccatatgcctttcaaacatcct taaaagatttaggcaaccagcca 6 6 13 1.1.2.2.13.6 BCBC-5A-0 14094818 P205555 Kifc2 ProximalPromoter P205555 ProximalPromoter Unique Tile chr15:76486758-76487691 (+) NM_010630 + 219 76487910 16581 Kifc2 - kinesin family member C2 MGI:109187 Mm.378950 15 15 D-E|15 43.4 cM KIFC2 90990 NM_019396;NM_180962; - 328 76487363 54151 Cyhr1 1 cacctgcaaggaagaaggactaa cgctgtctagtctcttttgggaa 6 6 14 1.1.2.2.14.6 BCBC-5A-0 14094837 P202620 ProximalPromoter P202620 ProximalPromoter Unique Tile chr17:81285166-81286252 (-) 0 tcagccaagaaactgtgaacaaa aaactcattcagcaggactcagg 6 6 15 1.1.2.2.15.6 BCBC-5A-0 14094856 P201228 Ankrd42 ProximalPromoter P201228 ProximalPromoter Unique Tile chr7:92512347-92513428 (-) NM_028665 - 120 92512227 73845 Ankrd42 4931426M20|4933417L02Rik ankyrin repeat domain 42 MGI:1921095 Mm.73248 7 7 E2 ANKRD42 338699 NM_029078 - 31648 92545076 74737 Pcf11 0 ctgtatttccccaaacaatcagc cggtcacttccgtatcctttatg 6 6 16 1.1.2.2.16.6 BCBC-5A-0 14094875 P200337 Cldn6 ProximalPromoter P200337 ProximalPromoter Unique Tile chr17:23406035-23407126 (+) NM_018777 + 117 23407009 54419 Cldn6 AL024037 claudin 6 MGI:1859284 Mm.86421 17 17 A3.3 CLDN6 9074 NM_013749 - 969 23405066 27279 Tnfrsf12a 2 ccctgactgtcctgaaactcact aaagctccagcatttaactcacg 6 6 17 1.1.2.2.17.6 BCBC-5A-0 14094894 P208562 Polr2d ProximalPromoter P208562 ProximalPromoter Unique Tile chr18:31945863-31946894 (+) NM_027101;NM_027002; + 14709 31932185 69241 Polr2d 2310002G05Rik|2610028L19Rik|HSRBP4|RBP4 polymerase (RNA) II (DNA directed) polypeptide D MGI:1916491 Mm.279898 18 18 B2 POLR2D 5433 NM_028866 + 23400 31970294 74320 Wdr33 1 tgtaccaccagcttgctcataga tctcagaacatcccatttcacaa 6 6 18 1.1.2.2.18.6 BCBC-5A-0 14094913 P208441 Neil1 ProximalPromoter P208441 ProximalPromoter Unique Tile chr9:56946087-56947119 (-) NM_028347 - 262 56946349 72774 Neil1 2810450N13Rik|Nei1 nei endonuclease VIII-like 1 (E. coli) MGI:1920024 Mm.35749 9 9 C NEIL1 79661 NM_025417 - 8157 56955276 66199 Commd4 0 ggtgactggaggaacaagagaaa agttttgcgaggtgtgagatagc 6 6 19 1.1.2.2.19.6 BCBC-5A-0 14094572 P100162 Efnb3 ProximalPromoter P100162 ProximalPromoter Unique Tile chr11:69375945-69376982 (-) NM_007911 - 304 69376249 13643 Efnb3 EFL-6|ELF-3|Elk-L3|Epl8|LERK-8|NLERK-2 ephrin B3 MGI:109196 Mm.249637 11 11 B3|11 40.0 cM EFNB3 1949 NM_144824 - 18537 69395519 216853 Wdr79 0 ggggagttcagcagcctagat caaaacctaacagcagcaggg 6 7 1 1.1.2.2.1.7 BCBC-5A-0 14094591 P101284 Fbxl8 ProximalPromoter P101284 ProximalPromoter Unique Tile chr8:108154512-108155467 (+) NM_015821 + 389 108155856 50788 Fbxl8 FBL8 F-box and leucine-rich repeat protein 8 MGI:1354697 Mm.334764 8 8 D1 FBXL8 55336 NM_001033161 - 791 108153721 71609 Tradd 0 agtccgttactagggggtgga ggtaggactttggttcccagc 6 7 2 1.1.2.2.2.7 BCBC-5A-0 14094610 P102034 2610029G23Rik ProximalPromoter P102034 ProximalPromoter Unique Tile chrX:101281280-101282194 (+) NM_026312 + 299 101282493 67683 2610029G23Rik - RIKEN cDNA 2610029G23 gene MGI:1914933 Mm.273405 X X C3 CXorf26 51260 NM_053201 + 40920 101323114 107528 Magee1 1 aggaagcccatagtgggagag cgcaaacacacacacacacac 6 7 3 1.1.2.2.3.7 BCBC-5A-0 14094629 P102885 Ifnar1 ProximalPromoter P102885 ProximalPromoter Unique Tile chr16:91372709-91373789 (+) NM_010508 + 318 91374107 15975 Ifnar1 CD118|Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 MGI:107658 Mm.502 16 16 C3.3|16 63.2 cM IFNAR1 3454 2 tccagctatacctcagacaaggc tactagtccactggctcgaatcc 6 7 4 1.1.2.2.4.7 BCBC-5A-0 14094648 P104007 Rogdi ProximalPromoter P104007 ProximalPromoter Unique Tile chr16:4928970-4929903 (-) NM_133185 - 122 4928848 66049 Rogdi 0610011C19Rik|AU020118|C76152|Lzf rogdi homolog (Drosophila) MGI:1913299 Mm.27792 16 16 A1|16 3.3 cM ROGDI 79641 NM_027669 - 15870 4913100 71089 4933413B09Rik 0 tgatgaggaaccttacttctgcc gctgtagcttctagtcctggctg 6 7 5 1.1.2.2.5.7 BCBC-5A-0 14094667 P106777 Hoxc5 DistalPromoter P106777 DistalPromoter Unique Tile chr15:102839336-102841241 (+) NM_175730 + 800 102842041 15424 Hoxc5 AI181837|Hox-3.4|Hox-6.2 homeo box C5 MGI:96196 Mm.103825 15 15 F3|15 57.4 cM HOXC5 3222 NM_010465 + 1824 102837512 15425 Hoxc6 1 acctcgcttcagactcctcagat gccaggtgaacttgggtagactt 6 7 6 1.1.2.2.6.7 BCBC-5A-0 14094686 P107266 Kcnab3 DistalPromoter P107266 DistalPromoter Unique Tile chr11:69143208-69145362 (+) NM_010599 + 2836 69142526 16499 Kcnab3 C330022D06Rik|Kcnab4|mKv(beta)4 potassium voltage-gated channel, shaker-related subfamily, beta member 3 MGI:1336208 Mm.232472 11 11 B4 KCNAB3 9196 NM_001024206 + 2906 69140302 245828 Trappc1 0 tagcttaaaggtctggctcaccc tgcatgtgttttgctggtctcta 6 7 7 1.1.2.2.7.7 BCBC-5A-0 14094705 P105879 Cyp3a41 DistalPromoter P105879 DistalPromoter Duplication Tile chr5:145839599-145841480 (-) NM_017396 - 1342 145838257 53973 Cyp3a41 - cytochrome P450, family 3, subfamily a, polypeptide 41 MGI:1858451 Mm.379071 5 5 G2|5 85.0 cM 0 tcctctgggtgttgttgttgttt caaatcaggatccaaaagctcct 6 7 8 1.1.2.2.8.7 BCBC-5A-0 14094724 P106471 Apof DistalPromoter P106471 DistalPromoter Unique Tile chr10:127667756-127669625 (+) NM_133997 + 1320 127670945 103161 Apof AI255964 apolipoprotein F MGI:104539 Mm.26513 10 10 D3|10 73.0 cM APOF 319 NM_019963 + 3899 127673524 20847 Stat2 0 aaactttcagcaatcctcttgcc agtgcttgattagcatgctggag 6 7 9 1.1.2.2.9.7 BCBC-5A-0 14094743 P203340 Ppa2 ProximalPromoter P203340 ProximalPromoter Unique Tile chr3:133246663-133247590 (+) NM_146141 + 169 133247421 74776 Ppa2 1110013G13Rik|MGC6539|Sid6306 pyrophosphatase (inorganic) 2 MGI:1922026 Mm.210305 3 3 G3 PPA2 27068 1 agtaggtgaggatgtgagccttg tactgaagaacaggcggtagtcc 6 7 10 1.1.2.2.10.7 BCBC-5A-0 14094762 P206141 Cfd ProximalPromoter P206141 ProximalPromoter Unique Tile chr10:79292851-79293765 (+) NM_013459 + 275 79294040 11537 Cfd Adn|DF|factor D complement factor D (adipsin) MGI:87931 Mm.4407 10 10 C1|10 43.0 cM CFD 1675 NM_015779 + 3388 79289463 50701 Ela2 0 tgctgctgcttcttcttcttctt gagtatccttccagccatgtgtc 6 7 11 1.1.2.2.11.7 BCBC-5A-0 14094781 P205727 2310022A10Rik ProximalPromoter P205727 ProximalPromoter Unique Tile chr7:27251818-27252788 (-) NM_175107 + 9282 27262070 66367 2310022A10Rik - RIKEN cDNA 2310022A10 gene MGI:1913617 Mm.29831 7 7 A3 C19orf47 126526 NM_011116 - 9084 27261872 18807 Pld3 0 gttcacccactctaaggctgcta tttttcgagacagggtttctctg 6 7 12 1.1.2.2.12.7 BCBC-5A-0 14094800 P203754 BC050196 ProximalPromoter P203754 ProximalPromoter Unique Tile chr7:45072864-45073781 (-) NM_201374 - 70 45072934 384619 BC050196 Gm1434|MGC60968 cDNA sequence BC050196 MGI:2687329 Mm.214931 7 7 B3 FLJ32658 147872 NM_015789 - 6112 45079893 50722 Dkkl1 0 tgccatccacatcactcattaac ggactccctgttcatccttttct 6 7 13 1.1.2.2.13.7 BCBC-5A-0 14094819 P205579 Lhx2 ProximalPromoter P205579 ProximalPromoter Unique Tile chr2:38162021-38163000 (+) NM_010710 + 10316 38173316 16870 Lhx2 LH2A|Lh-2|Lim2|ap|apterous LIM homeobox protein 2 MGI:96785 Mm.142856 2 2 B LHX2 9355 0 tggcttttggatacggagttcta gcatgacagttgcccataataca 6 7 14 1.1.2.2.14.7 BCBC-5A-0 14094838 P206427 C6 ProximalPromoter P206427 ProximalPromoter Unique Tile chr15:4676279-4677281 (+) NM_016704 + 61 4677220 12274 C6 AW111623 complement component 6 MGI:88233 Mm.20247 15 15 A1|15 3.0 cM C6 729 0 aaaggagaagaccatgatagccc ggatgtagaaaccaaagacacgc 6 7 15 1.1.2.2.15.7 BCBC-5A-0 14094857 P201252 Ddefl1 ProximalPromoter P201252 ProximalPromoter Unique Tile chr4:135465701-135466730 (+) NM_001008232 + 11769 135478499 230837 Ddefl1 9430088F20Rik|Gm140|MGC102639|UPLC1 development and differentiation enhancing factor-like 1 MGI:2684986 Mm.77788 4 4 D3 DDEFL1 55616 NM_177733 + 20940 135444761 242705 E2f2 0 gaattctccatctcctccatcct aaaaggttggacactcggtgtaa 6 7 16 1.1.2.2.16.7 BCBC-5A-0 14094876 P200361 Ppap2b ProximalPromoter P200361 ProximalPromoter Unique Tile chr4:104654062-104655053 (+) NM_080555 + 225 104655278 67916 Ppap2b 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b phosphatidic acid phosphatase type 2B MGI:1915166 Mm.348326 4 4 C7|4 52.7 cM PPAP2B 8613 NM_178143 - 46261 104607801 108079 Prkaa2 0 tgagccatttccacctctgtatt tcagaaactccaaagcatcacaa 6 7 17 1.1.2.2.17.7 BCBC-5A-0 14094895 P208586 Pck2 ProximalPromoter P208586 ProximalPromoter Unique Tile chr14:54493417-54494320 (+) NM_028994 + 16 54494336 74551 Pck2 1810010O14Rik|9130022B02Rik phosphoenolpyruvate carboxykinase 2 (mitochondrial) MGI:1860456 Mm.29856 14 14 C1|14 21.0 cM PCK2 5106 NM_008736 - 14381 54479036 18185 Nrl 0 gggtttttaaagaagccctcaga agtcatcacatcctcaagccatt 6 7 18 1.1.2.2.18.7 BCBC-5A-0 14094914 P208375 2410004F06Rik ProximalPromoter P208375 ProximalPromoter Unique Tile chr7:35246571-35247621 (-) NM_028034 - 129 35246442 71981 2410004F06Rik 2410070K17Rik|ECAT8 RIKEN cDNA 2410004F06 gene MGI:1919231 Mm.47904 7 7 B2 NM_033080 - 17067 35264688 110959 Nudt19 1 tcttgaaaccggaagtctctttg aactacagggctaggaaggatgc 6 7 19 1.1.2.2.19.7 BCBC-5A-0 14094573 P100186 Fbl ProximalPromoter P100186 ProximalPromoter Unique Tile chr7:27877624-27878579 (+) NM_007991 + 72 27878507 14113 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin MGI:95486 Mm.28251; Mm.4595; Mm.28251; Mm.4595; Mm.28251; Mm.4595; Mm.28251; Mm.4595; Mm.28251; Mm.4595; Mm.28251; Mm.4595; Mm.28251; Mm.4595 7 - FBL 2091 NM_010092;NM_001037957; + 9663 27888242 13549 Dyrk1b 0 cattaacactgggccttctgc cctggcttcattactgcgttc 6 8 1 1.1.2.2.1.8 BCBC-5A-0 14094592 P101308 Cdc37 ProximalPromoter P101308 ProximalPromoter Unique Tile chr9:20900472-20901429 (-) NM_016742 - 141 20900331 12539 Cdc37 p50 cell division cycle 37 homolog (S. cerevisiae) MGI:109531 Mm.32331 9 9 A3 CDC37 11140 NM_019798;NM_183408; + 14763 20916192 18577 Pde4a 2 cacatgcatgcctggtgtagt aaagggccaggagtatgtggt 6 8 2 1.1.2.2.2.8 BCBC-5A-0 14094611 P102058 2510049I19Rik ProximalPromoter P102058 ProximalPromoter Unique Tile chr8:75147591-75148628 (+) NM_026455 + 90 75148718 67922 2510049I19Rik AW822030 RIKEN cDNA 2510049I19 gene MGI:1915172 Mm.28327 8 8 B3.3 FAM32A 26017 NM_007456 + 20492 75169120 11767 Ap1m1 0 cacgcacctttaaactcagcc cgggtagtcttggcaactgtc 6 8 3 1.1.2.2.3.8 BCBC-5A-0 14094630 P103191 Clu ProximalPromoter P103191 ProximalPromoter Unique Tile chr14:64921278-64922375 (+) NM_013492 + 359 64922734 12759 Clu AI893575|ApoJ|Cli|D14Ucla3|SP-40|Sgp-2|Sgp2|Sugp-2 clusterin MGI:88423 Mm.200608 14 14 D1|14 28.0 cM CLU 1191 NM_172604 - 13424 64907854 219151 Scara3 0 gccacccaaactgtgttacctac gttcatcttccacatccttccac 6 8 4 1.1.2.2.4.8 BCBC-5A-0 14094649 P104031 Pla1a ProximalPromoter P104031 ProximalPromoter Unique Tile chr16:38352532-38353630 (-) NM_134102 - 154 38352378 85031 Pla1a AA986889|Ps-pla1|Pspla1 phospholipase A1 member A MGI:1934677 Mm.279805 16 16 B3|16 28.4 cM PLA1A 51365 NM_007414 - 18250 38371880 11544 Adprh 0 ctcatttgcctgtccttgagact aggctggaaagctctttcacttt 6 8 5 1.1.2.2.5.8 BCBC-5A-0 14094668 P106799 Itm2b DistalPromoter P106799 DistalPromoter Unique Tile chr14:72120847-72122704 (-) NM_008410 - 1412 72119435 16432 Itm2b AI256040|D14Sel6|E25BMM integral membrane protein 2B MGI:1309517 Mm.4266 14 14 D2|14 32.5 cM ITM2B 9445 0 ttgctcactgctaccacacaaaa actggaagccaagacaagaaagc 6 8 6 1.1.2.2.6.8 BCBC-5A-0 14094687 P107288 Ltbr DistalPromoter P107288 DistalPromoter Unique Tile chr6:125280789-125282822 (-) NM_010736 - 1316 125279473 17000 Ltbr AI256028|CD18|LTbetaR|Ltar|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFRrp|Tnfbr|Tnfrsf3 lymphotoxin B receptor MGI:104875 Mm.3122 6 6 F3|6 60.4 cM LTBR 4055 NM_011324 + 4649 125287471 20276 Scnn1a 0 aaacttcaaacatctcggcttcc aactgaccttttccatggtggat 6 8 7 1.1.2.2.7.8 BCBC-5A-0 14094706 P105588 Creb3 DistalPromoter P105588 DistalPromoter Unique Tile chr4:43580712-43582549 (+) NM_013497 + 1184 43583733 12913 Creb3 AU044960|AW538053|C80076|LZIP-1|LZIP-2|Luman cAMP responsive element binding protein 3 MGI:99946 Mm.12407 4 4 B1|4 20.5 cM CREB3 10488 NM_011602 - 806 43583355 21894 Tln1 0 tatcgtcccaggcacagagaata tgggcctaaaaataaaagccaga 6 8 8 1.1.2.2.8.8 BCBC-5A-0 14094725 P105655 Gckr DistalPromoter P105655 DistalPromoter Unique Tile chr5:31570970-31572742 (+) NM_144909 + 1419 31574161 231103 Gckr GKRP|MGC19300 glucokinase regulatory protein MGI:1096345 Mm.100043 5 5 B1 GCKR 2646 NM_022424 - 284 31572458 64339 Fndc4 0 taaatcaggatatggccgatgtg ggagatggaatgcctcttcctaa 6 8 9 1.1.2.2.9.8 BCBC-5A-0 14094744 P203364 Ephb3 ProximalPromoter P203364 ProximalPromoter Unique Tile chr16:21117646-21118629 (+) NM_010143 + 147 21118776 13845 Ephb3 AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6 Eph receptor B3 MGI:104770 Mm.6972 16 16 B1-B4 EPHB3 2049 NM_025634 - 49719 21067927 66561 2310042E22Rik 0 ttggctcttccttctagtcatgg agagcactctgctggagttcagt 6 8 10 1.1.2.2.10.8 BCBC-5A-0 14094763 P206165 Dsc1 ProximalPromoter P206165 ProximalPromoter Unique Tile chr18:20257791-20258804 (-) NM_013504 - 101 20257690 13505 Dsc1 Dsc1a|Dsc1b|MGC129348 desmocollin 1 MGI:109173 Mm.909 18 18 A2 DSC1 1823 0 ggaacaatggcttaaatgtctgc catggagagagggtttcctacaa 6 8 11 1.1.2.2.11.8 BCBC-5A-0 14094782 P204096 Adssl1 ProximalPromoter P204096 ProximalPromoter Unique Tile chr12:113066884-113067861 (+) NM_007421 + 35 113067896 11565 Adssl1 AI528595|Adss|Adss1 adenylosuccinate synthetase like 1 MGI:87947 Mm.3440 12 12 F1 ADSSL1 122622 NM_198411 + 14317 113052567 70435 2610204M08Rik 0 cagaagacacagaccaccatgac attaaatgcggacgcctagagag 6 8 12 1.1.2.2.12.8 BCBC-5A-0 14094801 P203778 BC051070 ProximalPromoter P203778 ProximalPromoter Unique Tile chr3:106534184-106535126 (-) NM_178412 - 54 106534238 229688 BC051070 MGC58999 cDNA sequence BC051070 MGI:2682303 Mm.261645 3 3 F2.3 0 tcttttgctcttccttccttcct tctgcttttaatgctgttcctcc 6 8 13 1.1.2.2.13.8 BCBC-5A-0 14094820 P205605 Magoh ProximalPromoter P205605 ProximalPromoter Unique Tile chr4:107376500-107377470 (+) NM_010760 + 277 107377747 17149 Magoh Mago-m mago-nashi homolog, proliferation-associated (Drosophila) MGI:1330312 Mm.808 4 4 C7|4 51.3 cM MAGOH 4116 NM_028754 + 10360 107387830 74098 0610037L13Rik 0 tcttgggtagtggtctccacatt tgagtcgaacgaggttattcaca 6 8 14 1.1.2.2.14.8 BCBC-5A-0 14094839 P206452 Ddah2 ProximalPromoter P206452 ProximalPromoter Unique Tile chr17:34666377-34667280 (+) NM_016765 + 124 34667156 51793 Ddah2 1110003M04Rik|AU019324|AW413173|Ddah|G6a|NG30 dimethylarginine dimethylaminohydrolase 2 MGI:1859016 Mm.1457 17 17 B1 DDAH2 23564 NM_001033221 - 6960 34674240 106722 AU023871 0 aacctttaggtggtgtgcaaaaa acccccagaggagagagttaatg 6 8 15 1.1.2.2.15.8 BCBC-5A-0 14094858 P201185 Eny2 ProximalPromoter P201185 ProximalPromoter Unique Tile chr15:44257321-44258260 (+) NM_175009 + 74 44258186 223527 Eny2 1810057B09Rik|6720481I12|DC6|Ey2 enhancer of yellow 2 homolog (Drosophila) MGI:1919286 Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334; Mm.291828; Mm.292021; Mm.395334 15 15 B3.2 ENY2 56943 NM_026149 - 298 44257962 67429 Nudcd1 0 caggacccgagtatttgaaactg gacgaccgttacctaccacactc 6 8 16 1.1.2.2.16.8 BCBC-5A-0 14094877 P200385 Ggps1 ProximalPromoter P200385 ProximalPromoter Unique Tile chr13:13855335-13856344 (-) NM_010282 - 177 13855512 14593 Ggps1 1810026C22Rik|9530089B04Rik|AI843169|C79210 geranylgeranyl diphosphate synthase 1 MGI:1341724 Mm.148039 13 13 A1|13 8.0 cM GGPS1 9453 NM_198122;NM_194262; + 427 13855917 94246 Arid4b 1 agaaaagaatgtccctacctcgg tccacgatgatctcagacttgaa 6 8 17 1.1.2.2.17.8 BCBC-5A-0 14094896 P208610 4930519N16Rik ProximalPromoter P208610 ProximalPromoter Unique Tile chr13:51182377-51183379 (+) NM_029173 + 139 51183518 75124 4930519N16Rik MGC27636 RIKEN cDNA 4930519N16 gene MGI:1922374 Mm.179243 13 13 B1 C9orf121 158046 NM_146043;NM_011462; + 35557 51146820 20729 Spin 0 ggtttgctgttttcagagtgctt cacctaatccactcctgctctgt 6 8 18 1.1.2.2.18.8 BCBC-5A-0 14094915 P208399 Tmem68 ProximalPromoter P208399 ProximalPromoter Unique Tile chr4:3501925-3503018 (-) NM_028097 - 8 3501933 72098 Tmem68 2010300G19Rik|AA408325|AW123402 transmembrane protein 68 MGI:1919348 Mm.212266 4 4 A1 TMEM68 137695 NM_054089 + 119 3502044 116940 Ncoa6ip 0 ctcccccactagaagactgttca ggtagtgccggtttcctttaact 6 8 19 1.1.2.2.19.8 BCBC-5A-0 14094574 P100492 Polr2c ProximalPromoter P100492 ProximalPromoter Unique Tile chr8:97745339-97746315 (+) NM_009090 + 318 97746633 20021 Polr2c 33kDa|MGC118242|RPB3|Rpo2-3|mRBP31 polymerase (RNA) II (DNA directed) polypeptide C MGI:109299 Mm.292492; Mm.339593; Mm.292492; Mm.339593; Mm.292492; Mm.339593; Mm.292492; Mm.339593; Mm.292492; Mm.339593; Mm.292492; Mm.339593; Mm.292492; Mm.339593; Mm.292492; Mm.339593 8 8 D1 POLR2C 5432 NM_026452 + 17794 97727545 67914 Coq9 1 gccagcctggtctacaaagtg ttggattgtattcccagcacc 6 9 1 1.1.2.2.1.9 BCBC-5A-0 14094593 P101332 Vti1b ProximalPromoter P101332 ProximalPromoter Unique Tile chr12:80091646-80092703 (-) NM_016800 - 372 80091274 53612 Vti1b AU015348|GES30|MVti1b|SNARE|Vti1-rp1 vesicle transport through interaction with t-SNAREs 1B homolog MGI:1855688 Mm.265929 12 12 C3 VTI1B 10490 NM_021557 - 17981 80110684 17252 Rdh11 2 cagctccaaaagacccaacac gctgtcatcgcagttccttct 6 9 2 1.1.2.2.2.9 BCBC-5A-0 14094612 P102082 Inoc1 ProximalPromoter P102082 ProximalPromoter Unique Tile chr2:119123094-119124021 (-) NM_026574 - 45960 119169054 68142 Inoc1 2310079N15Rik|4632409L19Rik|Ino80 INO80 complex homolog 1 (S. cerevisiae) MGI:1915392 Mm.330496 2 2 E5 0 ggtgctgttaaccactgagcc tgaggccctcgatgttagaga 6 9 3 1.1.2.2.3.9 BCBC-5A-0 14094631 P103215 Lzp-s ProximalPromoter P103215 ProximalPromoter Unique Tile chr10:116697056-116698026 (-) NM_013590 - 78 116696978 17110 Lzp-s - P lysozyme structural MGI:96902 Mm.177539 10 10 D2 NM_017372 - 10682 116686374 17105 Lyzs 0 gccctctgagatgaccactttta gatctgtgcgtaaagcaggaagt 6 9 4 1.1.2.2.4.9 BCBC-5A-0 14094650 P103965 Mup2 ProximalPromoter P103965 ProximalPromoter Unique Tile chr4:61269057-61269983 (-) NM_008647 - 479 61268578 17841 Mup2 AA589603|MGC117823|Mup-2 major urinary protein 2 MGI:97234 Mm.335875; Mm.422695; Mm.335875; Mm.422695; Mm.335875; Mm.422695; Mm.335875; Mm.422695 4 4 B3 NM_031188 - 480 61268577 17840 Mup1 0 aggtagatgaagatggggaggag gtacctgagtaccatgtccaggc 6 9 5 1.1.2.2.5.9 BCBC-5A-0 14094669 P106821 Klf2 DistalPromoter P106821 DistalPromoter Unique Tile chr8:75244881-75246987 (+) NM_008452 + 1034 75248021 16598 Klf2 Lklf Kruppel-like factor 2 (lung) MGI:1342772 Mm.26938 8 8 C1 KLF2 10365 0 cagaacccagacagtggaagaga ttcacctcccacaaacatacacc 6 9 6 1.1.2.2.6.9 BCBC-5A-0 14094688 P107310 Nfe2l2 DistalPromoter P107310 DistalPromoter Unique Tile chr2:75506335-75508279 (-) NM_010902 - 855 75505480 18024 Nfe2l2 AI194320|Nrf2 nuclear factor, erythroid derived 2, like 2 MGI:108420 Mm.1025 2 2 C3|2 45.0 cM NFE2L2 4780 NM_198090;NM_146130; + 44033 75462302 229279 Hnrpa3 0 ggaagacccatacctcatcatcc tatgatctcataaggccccacct 6 9 7 1.1.2.2.7.9 BCBC-5A-0 14094707 P105844 Ninj1 DistalPromoter P105844 DistalPromoter Unique Tile chr13:49196439-49198614 (+) NM_013610 + 869 49199483 18081 Ninj1 AU024536 ninjurin 1 MGI:1196617 Mm.18503 13 13 A5 NINJ1 4814 NM_026738 - 29349 49227963 68480 1110007C09Rik 0 aggctgaggtatcataggcaagc gtcgtccgaggagacacactaga 6 9 8 1.1.2.2.8.9 BCBC-5A-0 14094726 P000853 Blank P000853 Buffer Control Negative Blank 6 9 9 1.1.2.2.9.9 BCBC-5A-0 14094745 P203388 Klc3 ProximalPromoter P203388 ProximalPromoter Unique Tile chr7:18558232-18559307 (-) NM_146182 - 146 18558378 232943 Klc3 BC017147|Klct|MGC28837 kinesin light chain 3 MGI:1277971 Mm.213403 7 7 A3|7 4.0 cM KLC3 147700 NM_007710 + 10308 18569615 12715 Ckm 0 tgtgtgtgctgagctgtgtctaa ctacctttgtaaaccctggggac 6 9 10 1.1.2.2.10.9 BCBC-5A-0 14094764 P206189 Hprt1 ProximalPromoter P206189 ProximalPromoter Unique Tile chrX:49231665-49232594 (+) NM_013556 + 110 49232704 15452 Hprt1 C81579|HPGRT|Hprt|MGC103149 hypoxanthine guanine phosphoribosyl transferase 1 MGI:96217 Mm.299381 X X A6|X 17.0 cM HPRT1 3251 1 ccagggctatacagagaaaccct ggtgggcctgataattttctttc 6 9 11 1.1.2.2.11.9 BCBC-5A-0 14094783 P204120 Birc2 ProximalPromoter P204120 ProximalPromoter Unique Tile chr9:7837814-7838853 (-) NM_007465 - 2038 7835776 11797 Birc2 AW146227|Api1|Api2|Birc3|HIAP1|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF48|cIAP-1|cIAP-2|cIAP1|cIAP2|mcIAP1 baculoviral IAP repeat-containing 2 MGI:1197009 Mm.335659 9 9 A1 BIRC2 329 NM_007464 - 34651 7873504 11796 Birc3 0 cagaaatgacgggaaagaaaatg ttgatgccatgtgttttaacctg 6 9 12 1.1.2.2.12.9 BCBC-5A-0 14094802 P203712 1700016D06Rik ProximalPromoter P203712 ProximalPromoter Unique Tile chr8:11678616-11679686 (-) NM_024271 - 98 11678714 76413 1700016D06Rik - RIKEN cDNA 1700016D06 gene MGI:1923663 Mm.240088 8 8 A1.1 NM_133971 - 42955 11635661 102334 Ankrd10 0 atcccaaccactgacctgttaga gtcattgctcctctattcgctgt 6 9 13 1.1.2.2.13.9 BCBC-5A-0 14094821 P205629 Marcksl1 ProximalPromoter P205629 ProximalPromoter Unique Tile chr4:129014731-129015692 (+) NM_010807 + 255 129015947 17357 Marcksl1 AL022768|AW215397|AW536807|D4Bc1|F52|MacMARCKS|Macs-2|Macs-3|Macs2|Macs3|Mlp|Mrp MARCKS-like 1 MGI:97143 Mm.424974 4 4 D2.2|4 59.0 cM MARCKSL1 65108 NM_080442 - 21657 128993074 58864 Tssk3 0 ctgttcaggacatcagcctttct atgaagaagcactcagtcatccc 6 9 14 1.1.2.2.14.9 BCBC-5A-0 14094840 P206476 Avpr1a ProximalPromoter P206476 ProximalPromoter Unique Tile chr10:121850462-121851561 (+) NM_016847 + 3 121851558 54140 Avpr1a AVPR|Avpr1|V1a|V1aR arginine vasopressin receptor 1A MGI:1859216 Mm.4351 10 10 D3 AVPR1A 552 0 acgctctgaccaagaaactgaag gtcgttggtgatttgtccttttc 6 9 15 1.1.2.2.15.9 BCBC-5A-0 14094859 P201210 Tmc3 ProximalPromoter P201210 ProximalPromoter Unique Tile chr7:83459916-83461054 (+) NM_177695 + 61 83461115 233424 Tmc3 9030203A06 transmembrane channel-like gene family 3 MGI:2669033 Mm.333991; Mm.393090; Mm.333991; Mm.393090; Mm.333991; Mm.393090; Mm.333991; Mm.393090; Mm.333991; Mm.393090 7 7 D3 TMC3 342125 NM_023377 + 47147 83508201 170460 Stard5 0 tagcctgctcagctacacacaag ggtgtgttcacattgattggcta 6 9 16 1.1.2.2.16.9 BCBC-5A-0 14094878 P208465 Calr3 ProximalPromoter P208465 ProximalPromoter Unique Tile chr8:75372726-75373752 (-) NM_029782;NM_028500; - 41 75372767 73316 Calr3 1700031L01Rik|6330586I20Rik|Crt2 calreticulin 3 MGI:1920566 Mm.196315 8 8 C1 CALR3 125972 NM_028170 + 188 75372914 72254 1700030K09Rik 0 ttgtggaagccattctaggaaaa ggcgcaactcagaaactacaact 6 9 17 1.1.2.2.17.9 BCBC-5A-0 14094897 P208634 1700027N10Rik ProximalPromoter P208634 ProximalPromoter Unique Tile chr17:45607992-45609077 (-) NM_029338 - 213 45607779 75564 1700027N10Rik - RIKEN cDNA 1700027N10 gene MGI:1922814 Mm.17993 17 17 C C6orf206 221421 NM_025649 - 8013 45617090 66591 Mad2l1bp 2 cttcagattctggctcctgatgt aatacaaagccacaaggccacta 6 9 18 1.1.2.2.18.9 BCBC-5A-0 14094916 P208423 Wdr17 ProximalPromoter P208423 ProximalPromoter Unique Tile chr8:56223315-56224378 (-) NM_028220 - 5939 56217376 244484 Wdr17 3010002I12Rik|B230207L18Rik|MGC40755 WD repeat domain 17 MGI:1924662 Mm.95281 8 8 B3.1 WDR17 116966 0 agcagtatgcattgtgaaggtga ctgctgtgcagaagatgtgattc 6 9 19 1.1.2.2.19.9 BCBC-5A-0 14094575 P100516 Scg5 ProximalPromoter P100516 ProximalPromoter Unique Tile chr2:113630560-113631640 (-) NM_009162 - 600 113629960 20394 Scg5 7B2|AI325031|Sgne-1|Sgne1 secretogranin V MGI:98289 Mm.4836 2 2 E5|2 64.0 cM SCG5 6447 NM_181416 - 17814 113649454 228482 Arhgap11a 0 gtggtggtggggaatctacaa aagcagcaaacccactgacat 6 10 1 1.1.2.2.1.10 BCBC-5A-0 14094594 P101266 Col5a1 ProximalPromoter P101266 ProximalPromoter Unique Tile chr2:27707760-27708724 (+) NM_015734 + 31 27708693 12831 Col5a1 - procollagen, type V, alpha 1 MGI:88457 Mm.7281 2 2 A2-B|2 18.0 cM COL5A1 1289 2 gtgagttgttgggccactagg agggagtcataggaagctcgg 6 10 2 1.1.2.2.2.10 BCBC-5A-0 14094613 P102106 Cttnbp2nl ProximalPromoter P102106 ProximalPromoter Unique Tile chr3:105167226-105168321 (-) NM_030249 - 13745 105180971 80281 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|MGC7720|mKIAA1433 CTTNBP2 N-terminal like MGI:1933137 Mm.200327 3 3 F2.2 CTTNBP2NL 55917 0 tctactgggaggagcaagctg ttcccttctgcaaggggtaat 6 10 3 1.1.2.2.3.10 BCBC-5A-0 14094632 P103239 Nrk ProximalPromoter P103239 ProximalPromoter Unique Tile chrX:134260050-134260965 (+) NM_013724 + 97 134260868 27206 Nrk AA407323|AA409510|AI225895|AV168563|AW538185|Nesk Nik related kinase MGI:1351326 Mm.22367; Mm.392349; Mm.22367; Mm.392349; Mm.22367; Mm.392349; Mm.22367; Mm.392349; Mm.22367; Mm.392349; Mm.22367; Mm.392349; Mm.22367; Mm.392349; Mm.22367; Mm.392349; Mm.22367; Mm.392349; Mm.22367; Mm.392349; Mm.22367; Mm.392349; Mm.22367; Mm.392349 X X F1|X 53.0 cM NRK 203447 1 acaggtatggctccaaaatagca gagggaagtggagaggaaaagag 6 10 4 1.1.2.2.4.10 BCBC-5A-0 14094651 P103989 Foxp2 ProximalPromoter P103989 ProximalPromoter Unique Tile chr6:15145751-15146806 (+) NM_053242;NM_212435; + 11298 15135508 114142 Foxp2 2810043D05Rik|AI449000|CAG-16|D0Kist7 forkhead box P2 MGI:2148705 Mm.332919 6 6 A2 FOXP2 93986 0 gttgaggtcacaacacagtcagg aaaatcagctttcgtggagacac 6 10 5 1.1.2.2.5.10 BCBC-5A-0 14094670 P106921 Ppyr1 DistalPromoter P106921 DistalPromoter Unique Tile chr14:32977726-32979860 (-) NM_008919 - 3855 32981581 19065 Ppyr1 NYYR-D|Npy4r|Y4 pancreatic polypeptide receptor 1 MGI:105374 Mm.57059 14 14 B|14 10.5 cM PPYR1 5540 0 taatcactggctgtgcatagggt aggccaaattagccagagatcag 6 10 6 1.1.2.2.6.10 BCBC-5A-0 14094689 P107332 Prkacb DistalPromoter P107332 DistalPromoter Unique Tile chr3:146751532-146753527 (-) NM_011100 - 1216 146750316 18749 Prkacb Pkacb protein kinase, cAMP dependent, catalytic, beta MGI:97594 Mm.16766 3 3 H3 PRKACB 5567 0 agaaacactaacctggtccccaa gatccacagaggcacagagacat 6 10 7 1.1.2.2.7.10 BCBC-5A-0 14094708 P105865 Nbn DistalPromoter P105865 DistalPromoter Unique Tile chr4:15882137-15884238 (+) NM_013752 + 876 15885114 27354 Nbn Nbs1 nibrin MGI:1351625 Mm.20866 4 4 A NBN 4683 NM_026172 - 9483 15872654 67460 Decr1 0 ttgtctggatggcagaacctaaa acttcaacttctgggtgtggtga 6 10 8 1.1.2.2.8.10 BCBC-5A-0 14094727 P000949 Blank P000949 Buffer Control Negative Blank 6 10 9 1.1.2.2.9.10 BCBC-5A-0 14094746 P203322 Mrpl36 ProximalPromoter P203322 ProximalPromoter Unique Tile chr13:73795772-73796895 (+) NM_053163 + 115 73797010 94066 Mrpl36 AI646041 mitochondrial ribosomal protein L36 MGI:2137228 Mm.26775 13 13 C1 MRPL36 64979 NM_010888 - 1315 73794457 407785 Ndufs6 0 agttggaggaagccagtctcttt gaatcctgcactctaagctctgc 6 10 10 1.1.2.2.10.10 BCBC-5A-0 14094765 P206213 Mt1 ProximalPromoter P206213 ProximalPromoter Unique Tile chr8:97067414-97068490 (+) NM_013602 + 107 97068383 17748 Mt1 MT-I|Mt-1 metallothionein 1 MGI:97171 Mm.192991 8 8 C5|8 45.0 cM MT1A 4489 NM_008630 + 5485 97061929 17750 Mt2 0 ggcaagtcactgaacctctgaat agaccaaggatcgggagtcttac 6 10 11 1.1.2.2.11.10 BCBC-5A-0 14094784 P204145 Atp6v1e1 ProximalPromoter P204145 ProximalPromoter Unique Tile chr6:120788200-120789285 (-) NM_007510 - 104 120788304 11973 Atp6v1e1 2410029D23Rik|Atp6e|Atp6e2|Atp6v1e|D6Ertd385e|E2|P31|Vma4 VATPase, H+ transporting, lysosomal V1 subunit E1 MGI:894326 Mm.29045 6 6 F1|6 54.0 cM ATP6V1E1 529 NM_153516 + 12563 120801848 94044 Bcl2l13 1 ctacctcctaagggctgggatta ccctcacctgcttctgtacatct 6 10 12 1.1.2.2.12.10 BCBC-5A-0 14094803 P203736 4930425N13Rik ProximalPromoter P203736 ProximalPromoter Unique Tile chr9:59323362-59324426 (-) NM_178388 - 145 59323507 73893 4930425N13Rik - RIKEN cDNA 4930425N13 gene MGI:1921143 Mm.216135 9 9 B FLJ27523 338949 NM_010421 + 13246 59337672 15211 Hexa 0 tgcagtatgatcaaggaggacaa tctccttacccgttggtatctca 6 10 13 1.1.2.2.13.10 BCBC-5A-0 14094822 P205355 Ebf3 ProximalPromoter P205355 ProximalPromoter Unique Tile chr7:137152637-137153686 (-) NM_010096 - 120 137152757 13593 Ebf3 3110018A08Rik|KIAA4201|O/E-2|mKIAA4201 early B-cell factor 3 MGI:894289 Mm.258708 7 7 F3-F4 EBF3 253738 2 gaccatgtaacaggctggacac ctgctccaaagacaaataaacgg 6 10 14 1.1.2.2.14.10 BCBC-5A-0 14094841 P206500 Ccs ProximalPromoter P206500 ProximalPromoter Unique Tile chr19:4839276-4840366 (-) NM_016892 - 13 4839289 12460 Ccs Ccsd copper chaperone for superoxide dismutase MGI:1333783 Mm.426068 19 19 A|19 4.0 cM CCS 9973 NM_207268 + 138 4839414 399599 Ccdc87 0 actctcactgctgggagaatgac ggtccagagaccaacacaactct 6 10 15 1.1.2.2.15.10 BCBC-5A-0 14094860 P201234 Gpr34 ProximalPromoter P201234 ProximalPromoter Unique Tile chrX:12788567-12789545 (+) NM_011823 + 204 12789749 23890 Gpr34 - G protein-coupled receptor 34 MGI:1346334 Mm.391232 X X A1.3 GPR34 2857 NM_175669 + 28776 12818321 319200 Gpr82 0 cagaatcatggttgccaatgtta tcccctaagatgccaacaaacta 6 10 16 1.1.2.2.16.10 BCBC-5A-0 14094879 P208489 Efha1 ProximalPromoter P208489 ProximalPromoter Unique Tile chr14:56953530-56954444 (-) NM_028643 - 158 56953372 68514 Efha1 1110008L20Rik|4833427E09Rik|AU041871|Smhs2 EF hand domain family A1 MGI:1915764 Mm.26834 14 14 C2 EFHA1 221154 0 acaacaccctcttctggactctg ccaaggcaaaggacatgagttag 6 10 17 1.1.2.2.17.10 BCBC-5A-0 14094898 P208568 Rmi1 ProximalPromoter P208568 ProximalPromoter Unique Tile chr13:58410952-58412016 (+) NM_028904 + 126 58411890 74386 Rmi1 4932432N11Rik|C79893 RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) MGI:1921636 Mm.85289 13 13 B1 RMI1 80010 NM_025279 - 85 58412101 15387 Hnrpk 2 ggtaaatggattcaggcaaatca tgtaggtatctgggtgggctagg 6 10 18 1.1.2.2.18.10 BCBC-5A-0 14094917 P208447 Cxx1c ProximalPromoter P208447 ProximalPromoter Unique Tile chrX:49801482-49802544 (+) NM_028375 + 116 49802660 72865 Cxx1c 2900027G03Rik|Mar8.1|Mart8a CAAX box 1 homolog C (human) MGI:1920115 Mm.158897 X X A5 NM_024170 - 35765 49838309 66158 Cxx1a 0 gaggggtctctttccatctgttt gcttagctgaaagtgcagaggag 6 10 19 1.1.2.2.19.10 BCBC-5A-0 14094576 P100540 Sox4 ProximalPromoter P100540 ProximalPromoter Unique Tile chr13:28961667-28962641 (-) NM_009238 - 520 28961147 20677 Sox4 AA682046|Sox-4 SRY-box containing gene 4 MGI:98366 Mm.240627 13 13 A3-A5|13 20.0 cM SOX4 6659 0 gcggatgatcttgaactcctg aagaatcagcctttggtgcaa 6 11 1 1.1.2.2.1.11 BCBC-5A-0 14094595 P101290 Rab10 ProximalPromoter P101290 ProximalPromoter Unique Tile chr12:3309476-3310478 (-) NM_016676 - 444 3309920 19325 Rab10 AW107754 RAB10, member RAS oncogene family MGI:105066 Mm.378993 12 12 A1.1|12 2.0 cM RAB10 10890 2 gtttggaatcccggctctatc ctacaaccaactcctcacccg 6 11 2 1.1.2.2.2.11 BCBC-5A-0 14094614 P102423 Ascl2 ProximalPromoter P102423 ProximalPromoter Unique Tile chr7:142778385-142779427 (-) NM_008554 - 232 142778617 17173 Ascl2 2410083I15Rik|Mash2 achaete-scute complex homolog-like 2 (Drosophila) MGI:96920 Mm.196417 7 7 F5|7 69.3 cM ASCL2 430 NM_020286 + 35647 142815074 27027 Tspan32 0 cacaggatagaccacttgaaccc cttagcttattgcgtcctcgaaa 6 11 3 1.1.2.2.3.11 BCBC-5A-0 14094633 P103263 Gcat ProximalPromoter P103263 ProximalPromoter Unique Tile chr15:78857048-78858022 (+) NM_013847 + 106 78858128 26912 Gcat AI526977|Kbl glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase) MGI:1349389 Mm.237085 15 15 E1|15 46.6 cM GCAT 23464 NM_008197 + 1317 78855731 14958 H1f0 0 gtggtaagttggagacctggttg attgatttgtaagtcgacacccg 6 11 4 1.1.2.2.4.11 BCBC-5A-0 14094652 P104013 Ppargc1b ProximalPromoter P104013 ProximalPromoter Unique Tile chr18:61526237-61527276 (-) NM_133249 - 437 61525800 170826 Ppargc1b 4631412G21Rik|Perc peroxisome proliferative activated receptor, gamma, coactivator 1 beta MGI:2444934 Mm.32269 18 18 E1 PPARGC1B 133522 2 gccttaagcccaaagagtgaaat ctctctctctctctccccagaca 6 11 5 1.1.2.2.5.11 BCBC-5A-0 14094671 P105700 Rad23a DistalPromoter P105700 DistalPromoter Unique Tile chr8:87732110-87734273 (-) NM_009010 - 1364 87730746 19358 Rad23a 2310040P19Rik|AL024030|mHR23A RAD23a homolog (S. cerevisiae) MGI:105126 Mm.255539; Mm.395398; Mm.255539; Mm.395398; Mm.255539; Mm.395398; Mm.255539; Mm.395398; Mm.255539; Mm.395398; Mm.255539; Mm.395398; Mm.255539; Mm.395398; Mm.255539; Mm.395398; Mm.255539; Mm.395398 8 8 C3 RAD23A 5886 NM_007591 - 2666 87736939 12317 Calr 0 agggtacctggatacacccagaa gtagctgaaacatacgtcacccg 6 11 6 1.1.2.2.6.11 BCBC-5A-0 14094690 P107274 Kcnk2 DistalPromoter P107274 DistalPromoter Unique Tile chr1:191045990-191048014 (-) NM_010607 - 1187 191044803 16526 Kcnk2 A430027H14Rik|AI848635|TREK-1 potassium channel, subfamily K, member 2 Mm.33304; Mm.387016; Mm.33304; Mm.387016; Mm.33304; Mm.387016; Mm.33304; Mm.387016; Mm.33304; Mm.387016; Mm.33304; Mm.387016; Mm.33304; Mm.387016; Mm.33304; Mm.387016 1 1 H6 0 aatcctctcctatgagtgcaggg attgattttaggggtttggctca 6 11 7 1.1.2.2.7.11 BCBC-5A-0 14094709 P105887 DistalPromoter P105887 DistalPromoter Unique Tile chr2:65300473-65302612 (-) 0 aatttctcagtggcagacagtgc taattggaacgagcaggagaaca 6 11 8 1.1.2.2.8.11 BCBC-5A-0 14094728 P001045 Blank P001045 Buffer Control Negative Blank 6 11 9 1.1.2.2.9.11 BCBC-5A-0 14094747 P203346 Xpo1 ProximalPromoter P203346 ProximalPromoter Unique Tile chr11:23183346-23184275 (+) NM_001035226;NM_134014; + 59 23184334 103573 Xpo1 AA420417|Crm1 exportin 1, CRM1 homolog (yeast) MGI:2144013 Mm.217547 11 11 A3.2 XPO1 7514 2 tttgaactcaggacctctggaag gtttagccatgcgactaaccatc 6 11 10 1.1.2.2.10.11 BCBC-5A-0 14094766 P201662 AI182371 ProximalPromoter P201662 ProximalPromoter Unique Tile chr2:34930159-34931254 (+) NM_178885 - 7477 34922682 98870 AI182371 AI046667 expressed sequence AI182371 MGI:2138853 Mm.26731 2 2 B NM_010406 - 46754 34883405 15139 Hc 0 tgcatagagtttgctttccaaca gatgttcacagcattcgatcttg 6 11 11 1.1.2.2.11.11 BCBC-5A-0 14094785 P204169 Bmp4 ProximalPromoter P204169 ProximalPromoter Unique Tile chr14:45312798-45313870 (-) NM_007554 - 345 45312453 12159 Bmp4 Bmp2b|Bmp2b-1|Bmp2b1 bone morphogenetic protein 4 MGI:88180 Mm.6813 14 14 C1|14 15.0 cM BMP4 652 0 ttccttctcaccctttgtctctg ctgggcttccctgagtttagaat 6 11 12 1.1.2.2.12.11 BCBC-5A-0 14094804 P203760 1700019M22Rik ProximalPromoter P203760 ProximalPromoter Unique Tile chr12:96442903-96444001 (-) NM_027076 - 83 96442986 69423 1700019M22Rik - RIKEN cDNA 1700019M22 gene MGI:1916673 Mm.46121 12 12 E 0 caaaagcctaccagcagatgact gctcaacatcctgtgtcagattg 6 11 13 1.1.2.2.13.11 BCBC-5A-0 14094823 P205380 Eya1 ProximalPromoter P205380 ProximalPromoter Unique Tile chr1:14289767-14290733 (-) NM_010164 - 5646 14295413 14048 Eya1 bor eyes absent 1 homolog (Drosophila) MGI:109344 Mm.250185 1 1 A3|1 10.4 cM EYA1 2138 0 ttggagtactgtgccatttctga ctgagccctacaatgctcacttt 6 11 14 1.1.2.2.14.11 BCBC-5A-0 14094842 P206433 Nup50 ProximalPromoter P206433 ProximalPromoter Unique Tile chr15:84750126-84751192 (+) NM_016714 + 1 84751193 18141 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 MGI:1351502 Mm.28379 15 15 E2|15 49.3 cM NUP50 10762 2 aactgaatttagggctttcctcg gccatcttgtaactcgaatggac 6 11 15 1.1.2.2.15.11 BCBC-5A-0 14094861 P201258 St7l ProximalPromoter P201258 ProximalPromoter Unique Tile chr3:104991901-104992886 (+) NM_153091 + 250 104993136 229681 St7l MGC130399|St7r suppression of tumorigenicity 7-like MGI:2386964 Mm.206379 3 3 F2.2 ST7L 54879 NM_009797 - 436 104992450 12340 Capza1 1 ggagtcctgacagcaaaatcact ttccatacgtggttgagggtaac 6 11 16 1.1.2.2.16.11 BCBC-5A-0 14094880 P208514 Slc7a13 ProximalPromoter P208514 ProximalPromoter Unique Tile chr4:19744984-19745904 (+) NM_028746 + 4 19745900 74087 Slc7a13 0610009O04Rik|AGT-1|AGT1|XAT2 solute carrier family 7, (cationic amino acid transporter, y+ system) member 13 MGI:1921337 Mm.173833 4 4 A3 SLC7A13 157724 0 gtctaaaatgcagtgttgggacc tgcctataggtttgtggatgctt 6 11 17 1.1.2.2.17.11 BCBC-5A-0 14094899 P208592 Carkl ProximalPromoter P208592 ProximalPromoter Unique Tile chr11:73014737-73015748 (+) NM_029031 + 72 73015676 74637 Carkl 4930431K22Rik|AI194947|AW260459 carbohydrate kinase-like MGI:1921887 Mm.200905 11 11 B4 CARKL 23729 NM_031251 - 464 73015201 83429 Ctns 0 ttgaaaaaggcaagatccaggta aagtcgataccgagagtgacagg 6 11 18 1.1.2.2.18.11 BCBC-5A-0 14094918 P001596 Blank P001596 Buffer Control Negative Blank 6 11 19 1.1.2.2.19.11 BCBC-5A-0 14094577 P100564 Dynlt1 ProximalPromoter P100564 ProximalPromoter Duplication Tile chr17:6413771-6414675 (-) NM_009342 - 4668 6418439 21648 Dynlt1 MGC107110|MGC107111|Tctex-1|Tctex1 dynein light chain Tctex-type 1 MGI:98643 Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893; Mm.1948; Mm.381893 17 17 A1|17 3.1 cM DYNLT1 6993 NM_001033178 + 33359 6380412 77106 Gpr178 0 atttttgccctggctgtaggt gctttacacggcctgaagatg 6 12 1 1.1.2.2.1.12 BCBC-5A-0 14094596 P101314 Mcrs1 ProximalPromoter P101314 ProximalPromoter Unique Tile chr15:99079750-99080741 (-) NM_016766 - 213 99079963 51812 Mcrs1 C78274|ICP22BP|MGC103140|MGC117915|MSP58|P78 microspherule protein 1 MGI:1858420 Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472; Mm.272015; Mm.383472 15 15 F1 MCRS1 10445 NM_010601 + 26741 99053009 16512 Kcnh3 0 agagctgctccacttttgtgc acttacgcatgcgcagatttt 6 12 2 1.1.2.2.2.12 BCBC-5A-0 14094615 P102447 Nfkb1 ProximalPromoter P102447 ProximalPromoter Unique Tile chr3:135629273-135630358 (-) NM_008689 - 555 135628718 18033 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light chain gene enhancer in B-cells 1, p105 MGI:97312 Mm.256765 3 3 G3|3 68.9 cM NFKB1 4790 1 tcccattgcctctacctttgtaa gaagtcttcaatccgctcgatta 6 12 3 1.1.2.2.3.12 BCBC-5A-0 14094634 P103197 Eif4a2 ProximalPromoter P103197 ProximalPromoter Unique Tile chr16:23022286-23023276 (+) NM_013506 + 171 23023105 13682 Eif4a2 4833432N07Rik|BM-010|Ddx2b|Eif4 eukaryotic translation initiation factor 4A2 MGI:106906 Mm.260084 16 16 B1|16 14.2 cM EIF4A2 1974 NM_145480 - 19788 23043064 106344 Rfc4 0 tcctttgcacaagttggtagtga ggagaagtgtgtgccctaagaaa 6 12 4 1.1.2.2.4.12 BCBC-5A-0 14094653 P104037 Adcy3 ProximalPromoter P104037 ProximalPromoter Unique Tile chr12:4132819-4133745 (+) NM_138305 + 278 4133467 104111 Adcy3 AC3|mKIAA0511 adenylate cyclase 3 MGI:99675 Mm.71996 12 12 A-B ADCY3 109 1 aggcaccaatcaagctacttcag gattccctcatctcccttctgtt 6 12 5 1.1.2.2.5.12 BCBC-5A-0 14094672 P106963 Rps17 DistalPromoter P106963 DistalPromoter Unique Tile chr7:81219866-81221964 (-) NM_009092 - 1126 81218740 20068 Rps17 MGC107578|MGC107579 ribosomal protein S17 MGI:1309526 Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767; Mm.371577; Mm.41220; Mm.42767 7 7 D3 RPS17 6218 0 cccctaacctaggtctgcttcaa agtttcccaaaggaccagttcag 6 12 6 1.1.2.2.6.12 BCBC-5A-0 14094691 P107296 Mea1 DistalPromoter P107296 DistalPromoter Unique Tile chr17:46141466-46143432 (+) NM_010787 + 895 46144327 17256 Mea1 Mea-1 male enhanced antigen 1 MGI:96957 Mm.329083 17 17 C|17 24.3 cM MEA1 4201 NM_027910 - 658 46144090 71765 Klhdc3 1 gcttaccagcattgaaaatgtgc caaggctctcgggaaattaagaa 6 12 7 1.1.2.2.7.12 BCBC-5A-0 14094710 P106073 Fzd3 DistalPromoter P106073 DistalPromoter Unique Tile chr14:64208687-64210617 (-) NM_021458 - 1147 64207540 14365 Fzd3 AU020229|Fz3 frizzled homolog 3 (Drosophila) MGI:108476 Mm.243722 14 14 D1|14 27.0 cM FZD3 7976 NM_015795 + 10193 64220810 50759 Fbxo16 0 catctttctgctgagttctggga cctggaatctcaaacacatgacc 6 12 8 1.1.2.2.8.12 BCBC-5A-0 14094729 P001141 Blank P001141 Buffer Control Negative Blank 6 12 9 1.1.2.2.9.12 BCBC-5A-0 14094748 P203370 4931406C07Rik ProximalPromoter P203370 ProximalPromoter Unique Tile chr9:15051796-15052776 (-) NM_133732 - 95 15051891 70984 4931406C07Rik - RIKEN cDNA 4931406C07 gene MGI:1918234 Mm.261842 9 9 A3 C11orf54 28970 NM_027261;NM_029248; + 3876 15056652 75316 Josd3 1 gcacaaggatacacacacacaca aaaactcactgcaagccattctc 6 12 10 1.1.2.2.10.12 BCBC-5A-0 14094767 P201687 Arl5b ProximalPromoter P201687 ProximalPromoter Unique Tile chr2:14971931-14972832 (+) NM_029466 + 244 14973076 75869 Arl5b 4930587A11Rik|Arl8 ADP-ribosylation factor-like 5B MGI:1923119 Mm.174068 2 2 A2 ARL5B 221079 NM_028950 - 4897 14967034 74455 Nsun6 0 acctgaaaagggcgttagagaat ctctcctgccactctgaagaaac 6 12 11 1.1.2.2.11.12 BCBC-5A-0 14094786 P204102 Akp2 ProximalPromoter P204102 ProximalPromoter Unique Tile chr4:137068659-137069621 (-) NM_007431 - 260 137068399 11647 Akp2 Akp-2|TNAP|TNSALP alkaline phosphatase 2, liver MGI:87983 Mm.288186 4 4 D3|4 70.2 cM ALPL 249 0 gaacaaatgaaaacaaacccagg tctgtaggagactttgtccctcg 6 12 12 1.1.2.2.12.12 BCBC-5A-0 14094805 P203784 C130022K22Rik ProximalPromoter P203784 ProximalPromoter Unique Tile chr6:91842607-91843678 (+) NM_172730 + 103 91843575 232236 C130022K22Rik - RIKEN cDNA C130022K22 gene MGI:2444652 Mm.234879 6 6 D1 C3orf19 51244 NM_198668 + 26058 91869736 381798 4930590J08Rik 0 tcatcaatgtggagaacactgct aacgtccaaaggctttttctttc 6 12 13 1.1.2.2.13.12 BCBC-5A-0 14094824 P205404 Figf ProximalPromoter P205404 ProximalPromoter Unique Tile chrX:159716724-159717686 (+) NM_010216 + 15 159717671 14205 Figf AI325264|VEGF-D|Vegfd c-fos induced growth factor MGI:108037 Mm.297978 X X F5|X 70.0 cM FIGF 2277 NM_011081 + 46234 159763920 18700 Piga 0 ttccaaggctagtttagctggtg ctgcaaaaataatcaggaggtgg 6 12 14 1.1.2.2.14.12 BCBC-5A-0 14094843 P206458 Bok ProximalPromoter P206458 ProximalPromoter Unique Tile chr1:95514843-95515937 (+) NM_016778 + 170 95516107 51800 Bok AI847676|AU021146|matador|mtd Bcl-2-related ovarian killer protein MGI:1858494 Mm.3295 1 1 D BOK 666 NM_021537 - 48710 95466133 59041 Stk25 0 agtacgctgtttcatttccaagc ttaagaaaggccagcacaagttc 6 12 15 1.1.2.2.15.12 BCBC-5A-0 14094862 P200696 Tfdp1 ProximalPromoter P200696 ProximalPromoter Unique Tile chr8:13337584-13338488 (+) NM_009361 + 1162 13339650 21781 Tfdp1 Dp1|Drtf1 transcription factor Dp 1 MGI:101934 Mm.925 8 8 A1-A3 TFDP1 7027 NM_172282 + 49330 13288254 234076 Tmco3 1 tttcctccagaataaaatccggt cctctgtgtgtgtgtgtgtgtgt 6 12 16 1.1.2.2.16.12 BCBC-5A-0 14094881 P208538 ProximalPromoter P208538 ProximalPromoter Unique Tile chr19:25240340-25241279 (+) 0 aggtggatcactgagtttgaagc tgcaaagttctgcatcagaagag 6 12 17 1.1.2.2.17.12 BCBC-5A-0 14094900 P208616 4930556P03Rik ProximalPromoter P208616 ProximalPromoter Unique Tile chr15:99302905-99303948 (-) NM_029236 - 142 99302763 75284 4930556P03Rik AV138748 RIKEN cDNA 4930556P03 gene MGI:1922534 Mm.32826 15 15 F3 LOC144233 144233 NM_001001884 - 17123 99285782 380969 C230021P08Rik 0 ttttgcctatggatcagggtcta cgtcccctcttacttaacggact 6 12 18 1.1.2.2.18.12 BCBC-5A-0 14094919 P001692 Blank P001692 Buffer Control Negative Blank 6 12 19 1.1.2.2.19.12 BCBC-5A-0 14094578 P100498 Rrm1 ProximalPromoter P100498 ProximalPromoter Unique Tile chr7:102314274-102315205 (+) NM_009103 + 432 102315637 20133 Rrm1 RnrM1 ribonucleotide reductase M1 MGI:98180 Mm.197486 7 7 E3|7 69.0 cM RRM1 6240 NM_001011782 - 36484 102351689 257947 Olfr543 2 tgtcagttgtgggtggagatg aagaagcagataggaagcccg 6 13 1 1.1.2.2.1.13 BCBC-5A-0 14094597 P101338 Nxf1 ProximalPromoter P101338 ProximalPromoter Unique Tile chr19:8823106-8824198 (+) NM_016813 + 51 8824147 53319 Nxf1 Mex67|Mvb1|Tap nuclear RNA export factor 1 homolog (S. cerevisiae) MGI:1858330 Mm.7271 19 19 A|19 5.0 cM NXF1 10482 NM_025791 + 13842 8838040 66836 0610006I08Rik 1 aacacttgggagttggaagca agaatctctcctacgaccggc 6 13 2 1.1.2.2.2.13 BCBC-5A-0 14094616 P102471 Pcnt ProximalPromoter P102471 ProximalPromoter Unique Tile chr10:75887092-75888034 (-) NM_008787 - 464 75886628 18541 Pcnt AW476095|C86676|KEN|Pcnt2|kendrin pericentrin (kendrin) MGI:102722 Mm.251794 10 10 C1 PCNT 5116 NM_029816 + 4825 75892859 76964 2610028H24Rik 0 tctaaggatacctgccagttcca ctctcactccatccatcacctct 6 13 3 1.1.2.2.3.13 BCBC-5A-0 14094635 P103221 ProximalPromoter P103221 ProximalPromoter Unique Tile chr4:145368330-145369296 (+) 0 cttccacctgcttgttgacttct gcagagagagaaagaaagggacc 6 13 4 1.1.2.2.4.13 BCBC-5A-0 14094654 P106574 Aldh3a1 DistalPromoter P106574 DistalPromoter Unique Tile chr11:61021639-61023821 (+) NM_007436 + 1118 61024939 11670 Aldh3a1 Ahd-4|Ahd4|Aldh|Aldh3 aldehyde dehydrogenase family 3, subfamily A1 MGI:1353451 Mm.4257 11 11 B2|11 34.25 cM ALDH3A1 218 NM_001004143 - 30385 60991254 216825 Usp22 0 gtttccacttacctgtgtgcctg ccttatcataaagggtccccctc 6 13 5 1.1.2.2.5.13 BCBC-5A-0 14094673 P106985 Spink3 DistalPromoter P106985 DistalPromoter Unique Tile chr18:43863489-43865540 (-) NM_009258 - 961 43862528 20730 Spink3 MGC107555|p12 serine peptidase inhibitor, Kazal type 3 MGI:106202 Mm.272 18 18 B3 SPINK1 6690 NM_054038 + 24117 43889657 117158 Scgb3a2 0 tcccacattgagactgtccctta aattcatgtggtcctcccttcat 6 13 6 1.1.2.2.6.13 BCBC-5A-0 14094692 P107318 Nktr DistalPromoter P107318 DistalPromoter Unique Tile chr9:121564806-121566720 (+) NM_010918 + 1158 121567878 18087 Nktr 5330401F18Rik|D9Wsu172e natural killer tumor recognition sequence MGI:97346 Mm.32842 9 9 F4|9 71.0 cM NKTR 4820 NM_026794 + 5720 121559086 26901 Deb1 0 gtgacagaaaggccaagacagaa tcagtgttgaggttgggtctgtt 6 13 7 1.1.2.2.7.13 BCBC-5A-0 14094711 P106095 Qk DistalPromoter P106095 DistalPromoter Unique Tile chr17:10164550-10166466 (-) NM_021881 - 1339 10163211 19317 Qk 1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking MGI:97837 Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895; Mm.262294; Mm.384135; Mm.394895 17 17 A1|17 5.9 cM 0 cacactacagcagtcgagggagt ggtcacacttataggccctttgg 6 13 8 1.1.2.2.8.13 BCBC-5A-0 14094730 P000865 Blank P000865 Buffer Control Negative Blank 6 13 9 1.1.2.2.9.13 BCBC-5A-0 14094749 P203394 Otx2 ProximalPromoter P203394 ProximalPromoter Unique Tile chr14:47584720-47585656 (-) NM_144841 - 103 47584823 18424 Otx2 E130306E05Rik orthodenticle homolog 2 (Drosophila) MGI:97451 Mm.134516 14 14 C1|14 19.0 cM OTX2 5015 2 ctggatctgtagcctcctgacat caggcttttaaaggagttgcaga 6 13 10 1.1.2.2.10.13 BCBC-5A-0 14094768 P201712 Exoc2 ProximalPromoter P201712 ProximalPromoter Unique Tile chr13:30981771-30982674 (-) NM_025588 - 259 30981512 66482 Exoc2 2410030I24Rik|AI648199|Sec5|Sec5l1 exocyst complex component 2 MGI:1913732 Mm.293510 13 13 A3.2 EXOC2 55770 NM_001013788 + 143 30981628 432743 LOC432743 0 ggatggtctggaaacactttgac agaaaagaaggagggaagcagaa 6 13 11 1.1.2.2.11.13 BCBC-5A-0 14094787 P204127 Arf1 ProximalPromoter P204127 ProximalPromoter Unique Tile chr11:59044235-59045186 (-) NM_007476 - 147 59044382 11840 Arf1 - ADP-ribosylation factor 1 MGI:99431 Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875; Mm.371546; Mm.407875 11 11 B2 ARF1 375 NM_024210 + 19673 59024562 67862 2310033P09Rik 1 actcaatagatagggctccaggc ctcactgagcatagacctcaggc 6 13 12 1.1.2.2.12.13 BCBC-5A-0 14094806 P204674 Mfng ProximalPromoter P204674 ProximalPromoter Unique Tile chr15:78600934-78602020 (-) NM_008595 - 223 78600711 17305 Mfng AW546563 manic fringe homolog (Drosophila) MGI:1095404 Mm.149235 15 15 E1|15 44.8 cM MFNG 4242 NM_130859 - 28277 78630297 105844 Card10 0 acagactggaagaggtgtccttg cacagtcctttctctggctccta 6 13 13 1.1.2.2.13.13 BCBC-5A-0 14094825 P205428 Gfra3 ProximalPromoter P205428 ProximalPromoter Unique Tile chr18:34844927-34845839 (-) NM_010280 - 204 34845131 14587 Gfra3 Y15110 glial cell line derived neurotrophic factor family receptor alpha 3 MGI:1201403 Mm.16520 18 18 B1 GFRA3 2676 NM_009860 - 31270 34877109 12532 Cdc25c 1 tttagcaaaagtcctgagatcgg agcccagagggtttctgaataac 6 13 14 1.1.2.2.14.13 BCBC-5A-0 14094844 P206482 Exoc7 ProximalPromoter P206482 ProximalPromoter Unique Tile chr11:116122704-116123741 (-) NM_016857 - 59 116122763 53413 Exoc7 70kDa|Exo70|mKIAA1067|sec70 exocyst complex component 7 MGI:1859270 Mm.22530 11 11 E2 EXOC7 23265 NM_010254 + 25633 116097071 14428 Galr2 0 cctcagtcagcgcttttatccta ctgcttcagtttgtcctcgatct 6 13 15 1.1.2.2.15.13 BCBC-5A-0 14094863 P200720 Prepl ProximalPromoter P200720 ProximalPromoter Unique Tile chr17:84998386-84999399 (-) NM_145984 - 145 84998531 213760 Prepl 2810457N15Rik|9530014L06Rik|D030028O16Rik|MGC7980|mKIAA0436 prolyl endopeptidase-like MGI:2441932 Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035; Mm.227176; Mm.259035 17 17 E4 PREPL 9581 1 cgagcacaaggattttctgagtt agaggaattaggaaaggggaacc 6 13 16 1.1.2.2.16.13 BCBC-5A-0 14094882 P208471 ProximalPromoter P208471 ProximalPromoter Unique Tile chr15:33350537-33351607 (-) 0 ttctaaggataaactcccccagc tgcttcaactactgctcatgctc 6 13 17 1.1.2.2.17.13 BCBC-5A-0 14094901 P208640 Dusp9 ProximalPromoter P208640 ProximalPromoter Unique Tile chrX:69891241-69892292 (+) NM_029352 + 132 69892160 75590 Dusp9 Dusp4|Mpk4|Pyst3 dual specificity phosphatase 9 MGI:2387107 Mm.16479 X X B DUSP9 1852 NM_012040 - 20256 69912548 93843 Pnck 0 cctctcctttcattgtcagcact gtaggtatcgttcatggagacgg 6 13 18 1.1.2.2.18.13 BCBC-5A-0 14094920 P001788 Blank P001788 Buffer Control Negative Blank 6 13 19 1.1.2.2.19.13 BCBC-5A-0 14094579 P100522 Cox7a2l ProximalPromoter P100522 ProximalPromoter Unique Tile chr17:83423291-83424369 (-) NM_009187 - 663 83422628 20463 Cox7a2l COX7AR|COX7RP|EB1|MGC103208|SIG-81|SIG81|Silg81 cytochrome c oxidase subunit VIIa polypeptide 2-like MGI:106015 Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445; Mm.30072; Mm.390445 17 17 E4 COX7A2L 9167 0 aagctgctggaatctttgctg aggaaagaaggggtagagggg 6 14 1 1.1.2.2.1.14 BCBC-5A-0 14094598 P101644 Statip1 ProximalPromoter P101644 ProximalPromoter Unique Tile chr18:24746123-24747074 (+) NM_021448 + 70 24747004 58523 Statip1 AU023723|Elp2|StIP1 signal transducer and activator of transcription interacting protein 1 MGI:1889642 Mm.25298 18 18 A2 STATIP1 55250 NM_139143 - 374 24746497 106957 Slc39a6 1 tatatggggcccctaagttgg aactcaaagctcctcgaaccc 6 14 2 1.1.2.2.2.14 BCBC-5A-0 14094617 P102495 2900009I07Rik ProximalPromoter P102495 ProximalPromoter Unique Tile chr19:24510753-24511802 (-) NM_026520 - 33786 24544539 68034 2900009I07Rik 2410124L17Rik RIKEN cDNA 2900009I07 gene MGI:1915284 Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538; Mm.217214; Mm.394538 19 19 C1 FAM122A 116224 0 atttcatgatgagaggacaccgt catcgttgacactgcttttgttc 6 14 3 1.1.2.2.3.14 BCBC-5A-0 14094636 P103245 Gyg ProximalPromoter P103245 ProximalPromoter Unique Tile chr3:20347326-20348263 (-) NM_013755 - 199 20347127 27357 Gyg AU017667|Gyg1 glycogenin MGI:1351614 Mm.6375 3 3 A2|3 12.5 cM GYG1 2992 0 agatatggcctaggatgatgggt ggcaggaaaaggaagggtaataa 6 14 4 1.1.2.2.4.14 BCBC-5A-0 14094655 P106596 Aup1 DistalPromoter P106596 DistalPromoter Unique Tile chr6:83017228-83019292 (+) NM_007517 + 1018 83020310 11993 Aup1 AA589454 ancient ubiquitous protein MGI:107789 Mm.386752 6 6 C3|6 34.77 cM AUP1 550 NM_019752 - 937 83020229 64704 Htra2 1 cttcagcattttgtgccaatttc cacactgaggattcaaaccaagg 6 14 5 1.1.2.2.5.14 BCBC-5A-0 14094674 P106929 Prox1 DistalPromoter P106929 DistalPromoter Unique Tile chr1:191864065-191866260 (-) NM_008937 - 7403 191871468 19130 Prox1 A230003G05Rik prospero-related homeobox 1 MGI:97772 Mm.132579; Mm.392678; Mm.132579; Mm.392678; Mm.132579; Mm.392678; Mm.132579; Mm.392678; Mm.132579; Mm.392678; Mm.132579; Mm.392678; Mm.132579; Mm.392678; Mm.132579; Mm.392678; Mm.132579; Mm.392678; Mm.132579; Mm.392678 1 1 H6|1 106.3 cM PROX1 5629 0 tattgcctgcttaaaccccagat agttaaggggtagggggcactaa 6 14 6 1.1.2.2.6.14 BCBC-5A-0 14094693 P107340 Pla2g5 DistalPromoter P107340 DistalPromoter Unique Tile chr4:138102148-138103948 (+) NM_011110 - 10855 138091293 18784 Pla2g5 PLA2 phospholipase A2, group V MGI:101899 Mm.23347 4 4 D3|4 68.0 cM PLA2G5 5322 NM_012044 + 46069 138150017 26970 Pla2g2e 0 gcgtgtagctgtttctgcttcat aaggccttgtcttgtttttcctg 6 14 7 1.1.2.2.7.14 BCBC-5A-0 14094712 P106117 Retn DistalPromoter P106117 DistalPromoter Unique Tile chr8:3652226-3654391 (+) NM_022984 + 1397 3655788 57264 Retn ADSF|Fizz3|Rstn|Xcp4 resistin MGI:1888506 Mm.1181 8 8 A1|8 0.37 cM RETN 56729 NM_026985 + 11370 3665761 69189 1810033B17Rik 0 tcttggagctgatggaagttgag catagtacacagctgctttgggg 6 14 8 1.1.2.2.8.14 BCBC-5A-0 14094731 P000961 Blank P000961 Buffer Control Negative Blank 6 14 9 1.1.2.2.9.14 BCBC-5A-0 14094750 P202155 Ttpa ProximalPromoter P202155 ProximalPromoter Unique Tile chr4:19934364-19935301 (+) NM_015767 + 273 19935574 50500 Ttpa - tocopherol (alpha) transfer protein MGI:1354168 Mm.24375 4 4 A3|4 22.7 cM TTPA 7274 NM_010281 + 33897 19969198 14590 Ggh 0 cctagctacttgtcccagggttt gacttttctcaccctttcctcgt 6 14 10 1.1.2.2.10.14 BCBC-5A-0 14094769 P201736 B530045E10Rik ProximalPromoter P201736 ProximalPromoter Unique Tile chr10:98727667-98728628 (+) NM_177302 + 53 98728575 320966 B530045E10Rik - RIKEN cDNA B530045E10 gene MGI:2445145 Mm.210209 10 10 D1 NM_026268 + 34331 98693336 67603 Dusp6 0 ttctctgagtgatagtgggagcc gggcaaggtctgttaatcctctt 6 14 11 1.1.2.2.11.14 BCBC-5A-0 14094788 P204151 Baat ProximalPromoter P204151 ProximalPromoter Unique Tile chr4:49527569-49528525 (-) NM_007519 - 13 49527582 12012 Baat AI118337|AI158864|BAT bile acid-Coenzyme A: amino acid N-acyltransferase MGI:106642 Mm.2859 4 4 B1|4 22.7 cM BAAT 570 NM_178603 - 13635 49542160 28028 Mrpl50 0 tcaccgtgtgagtgctaggaata aatgcagactattcggtcagagc 6 14 12 1.1.2.2.12.14 BCBC-5A-0 14094807 P204699 Mut ProximalPromoter P204699 ProximalPromoter Unique Tile chr17:40396899-40397945 (+) NM_008650 + 250 40398195 17850 Mut D230010K02Rik methylmalonyl-Coenzyme A mutase MGI:97239 Mm.259884 17 17 C-D|17 22.5 cM MUT 4594 NM_031863 - 23 40397968 83815 Cenpq 0 cgacatcaaccaaacatgaggta tgaagcaactgtgaagagtcgag 6 14 13 1.1.2.2.13.14 BCBC-5A-0 14094826 P205361 Egf ProximalPromoter P205361 ProximalPromoter Unique Tile chr3:129747266-129748307 (-) NM_010113 - 63 129747329 13645 Egf AI790464 epidermal growth factor MGI:95290 Mm.366162 3 3 G3|3 65.2 cM EGF 1950 0 catcttgacttgaattcggaacc gggatggtgctaacaacgaaata 6 14 14 1.1.2.2.14.14 BCBC-5A-0 14094845 P206507 Prg3 ProximalPromoter P206507 ProximalPromoter Unique Tile chr2:84788085-84789172 (+) NM_016914 + 119 84789053 53856 Prg3 MBP2|MBPH|MGC129482|MGC129483 proteoglycan 3 MGI:1858200 Mm.19943 2 2 D|2 50.0 cM PRG3 10394 NM_008920 + 6766 84781319 19074 Prg2 0 aggatttttattgccgtgacaga tatgtggggaaagaagaagcaaa 6 14 15 1.1.2.2.15.14 BCBC-5A-0 14094864 P200744 D4Ertd22e ProximalPromoter P200744 ProximalPromoter Unique Tile chr4:140412069-140413063 (-) NM_174996;NM_001025608; - 197 140411872 213491 D4Ertd22e 1110022I03 DNA segment, Chr 4, ERATO Doi 22, expressed MGI:1098672 Mm.332006 4 4 E1|4 69.8 cM NM_172518 + 6943 140420006 213499 Fbxo42 1 aggggctgtcctagaactcattc agtgacgttacctgctccagttc 6 14 16 1.1.2.2.16.14 BCBC-5A-0 14094883 P208495 Herc3 ProximalPromoter P208495 ProximalPromoter Unique Tile chr6:58759871-58760854 (+) NM_028705 + 2423 58763277 73998 Herc3 5730409F18Rik|AI646603|MGC30404|mKIAA0032 hect domain and RLD 3 MGI:1921248 Mm.191892 6 6 B3 HERC3 8916 0 gttttcaaagcctgaagacctga caaccaggtgtggtagacagatg 6 14 17 1.1.2.2.17.14 BCBC-5A-0 14094902 P207692 1700023B02Rik ProximalPromoter P207692 ProximalPromoter Unique Tile chr2:73113255-73114177 (-) NM_025854 - 87 73113342 66935 1700023B02Rik 2810021A19Rik|Cicr|Cir|MGC117636 RIKEN cDNA 1700023B02 gene MGI:1914185 Mm.292140; Mm.361271; Mm.292140; Mm.361271; Mm.292140; Mm.361271; Mm.292140; Mm.361271; Mm.292140; Mm.361271; Mm.292140; Mm.361271; Mm.292140; Mm.361271; Mm.292140; Mm.361271; Mm.292140; Mm.361271; Mm.292140; Mm.361271; Mm.292140; Mm.361271; Mm.292140; Mm.361271 2 2 C3 CIR 9541 NM_029022 + 235 73113490 74616 Scrn3 0 actaagccttgcttacccgaaac ccttcttgatgttggatttggac 6 14 18 1.1.2.2.18.14 BCBC-5A-0 14094921 P001884 Blank P001884 Buffer Control Negative Blank 6 14 19 1.1.2.2.19.14 BCBC-5A-0 14094580 P100546 Sephs2 ProximalPromoter P100546 ProximalPromoter Unique Tile chr7:127065534-127066521 (-) NM_009266 - 327 127065207 20768 Sephs2 Sps2|Ysg3 selenophosphate synthetase 2 MGI:108388 Mm.20294 7 7 F3|7 62.0 cM SEPHS2 22928 NM_023203 - 13692 127051842 66422 2410015N17Rik 0 gccaagctacacagtcatccc gctggcagaagtctgctgttt 6 15 1 1.1.2.2.1.15 BCBC-5A-0 14094599 P101668 2210009G21Rik ProximalPromoter P101668 ProximalPromoter Unique Tile chr2:136582861-136583809 (-) NM_001038641;NM_028834;NM_028201; + 96 136583713 74243 2210009G21Rik 2410004I22Rik|C85661 RIKEN cDNA 2210009G21 gene MGI:1921493 Mm.330612 2 2 G1 C20orf94 128710 NM_021527 - 242 136582619 59030 Mkks 0 ctcttacctacgatggtggcg gtcctaggtggcgtttcctct 6 15 2 1.1.2.2.2.15 BCBC-5A-0 14094618 P102429 ProximalPromoter P102429 ProximalPromoter No Hits Tile 1 cagtttcctgccatattccatgt tcttctaaatggaacgaagaggc 6 15 3 1.1.2.2.3.15 BCBC-5A-0 14094637 P103269 Timm9 ProximalPromoter P103269 ProximalPromoter Unique Tile chr12:72055305-72056395 (-) NM_013896;NM_001024853;NM_001024854; - 25 72055280 30056 Timm9 2810011L15Rik|Tim10a|Timm10 translocase of inner mitochondrial membrane 9 homolog (yeast) MGI:1353436 Mm.207767 12 12 C3 TIMM9 26520 0 gcttctcaaaacttaaggacgca ttcagacccttagacgcagattc 6 15 4 1.1.2.2.4.15 BCBC-5A-0 14094656 P106618 Casp4 DistalPromoter P106618 DistalPromoter Unique Tile chr9:5318146-5320271 (+) NM_007609 + 11398 5308873 12363 Casp4 Casp11|Caspase-11|Caspl|ich-3 caspase 4, apoptosis-related cysteine peptidase MGI:107700 Mm.1569 9 9 A1 CASP4 837 NM_009807 + 19630 5298516 12362 Casp1 2 tttaatgggtttcctgtgtccct actaaacgtggaagtacccaccc 6 15 5 1.1.2.2.5.15 BCBC-5A-0 14094675 P106951 DistalPromoter P106951 DistalPromoter No Hits Tile 1 tgcagatgttcagcacagaccta ccaagggaagaactaggctgcta 6 15 6 1.1.2.2.6.15 BCBC-5A-0 14094694 P105207 Bat2 DistalPromoter P105207 DistalPromoter Unique Tile chr17:34772392-34774356 (-) NM_020027 - 517 34772909 53761 Bat2 3110039B05Rik|Bat-2|D17H6S51E|G2|KIAA4178|Wbp12|mKIAA4178 HLA-B associated transcript 2 MGI:1915467 Mm.272462 17 17 B1|17 19.04 cM BAT2 7916 NM_019467 - 6410 34780766 11629 Aif1 1 ttgctgttctttcagaggacctg ctccagaaccagagtgactcgac 6 15 7 1.1.2.2.7.15 BCBC-5A-0 14094713 P106139 Stoml2 DistalPromoter P106139 DistalPromoter Unique Tile chr4:43054027-43055907 (-) NM_023231 - 1543 43052484 66592 Stoml2 0610038F01Rik|MSLP2 stomatin (Epb7.2)-like 2 MGI:1913842 Mm.331565 4 4 B1 STOML2 30968 NM_172691 - 1946 43057853 230088 B230312A22Rik 0 ctcaggatactcaagccaaccct cacatacaggctttcgaagatgg 6 15 8 1.1.2.2.8.15 BCBC-5A-0 14094732 P001057 Blank P001057 Buffer Control Negative Blank 6 15 9 1.1.2.2.9.15 BCBC-5A-0 14094751 P202179 Psma3 ProximalPromoter P202179 ProximalPromoter Unique Tile chr12:71933543-71934520 (+) NM_011184 + 41183 71893337 19167 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 MGI:104883 Mm.296338; Mm.381569; Mm.296338; Mm.381569; Mm.296338; Mm.381569; Mm.296338; Mm.381569; Mm.296338; Mm.381569; Mm.296338; Mm.381569; Mm.296338; Mm.381569; Mm.296338; Mm.381569; Mm.296338; Mm.381569; Mm.296338; Mm.381569; Mm.296338; Mm.381569; Mm.296338; Mm.381569 12 12 C3 PSMA3 5684 1 tgtctaaggtcatagtggcagca ctcattggatgtagctgggaaac 6 15 10 1.1.2.2.10.15 BCBC-5A-0 14094770 P201669 P2rx4 ProximalPromoter P201669 ProximalPromoter Unique Tile chr5:122967050-122967949 (+) NM_011026 + 276 122968225 18438 P2rx4 AI504491|AW555605|D5Ertd444e|P2X4 purinergic receptor P2X, ligand-gated ion channel 4 MGI:1338859 Mm.290884 5 5 F|5 65.0 cM P2RX4 5025 0 ggactggatgctgagagacctta agttctgttgcaaaggacagctc 6 15 11 1.1.2.2.11.15 BCBC-5A-0 14094789 P204175 Btc ProximalPromoter P204175 ProximalPromoter End Repeat Tile chr5:92478009-92478951 (-) NM_007568 - 104 92478113 12223 Btc - betacellulin, epidermal growth factor family member MGI:99439 Mm.2024 5 5 E2|5 51.0 cM BTC 685 1 cacacacacacacacacacacac tgcttgaaaactaatccctgagc 6 15 12 1.1.2.2.12.15 BCBC-5A-0 14094808 P204723 Nin ProximalPromoter P204723 ProximalPromoter Unique Tile chr12:71032263-71033327 (-) NM_008697 - 1700 71030563 18080 Nin AI385615|mKIAA1565 ninein MGI:105108 Mm.244047 12 - NIN 51199 0 ccagaacacccaggactttgtag ttagtgccttagttcggaagctg 6 15 13 1.1.2.2.13.15 BCBC-5A-0 14094827 P205386 Fcer1g ProximalPromoter P205386 ProximalPromoter Unique Tile chr1:173070887-173071916 (-) NM_010185 - 77 173070964 14127 Fcer1g AI573376|CD23|FcR-gamma|FcR[g]|Fce1g|Ly-50 Fc receptor, IgE, high affinity I, gamma polypeptide MGI:95496 Mm.22673 1 1 H3|1 93.3 cM FCER1G 2207 NM_013474 + 9105 173061782 11807 Apoa2 0 tttaagacaaggggtttgggatt aaaggagcaagaacaagatcacg 6 15 14 1.1.2.2.14.15 BCBC-5A-0 14094846 P206622 Camkk1 ProximalPromoter P206622 ProximalPromoter Unique Tile chr11:72834144-72835132 (+) NM_018883 + 105 72835237 55984 Camkk1 AI846603|CaMKKalpha|Camkk calcium/calmodulin-dependent protein kinase kinase 1, alpha MGI:1891766 Mm.9998 11 11 B4 CAMKK1 84254 NM_008771 + 18808 72815336 18436 P2rx1 1 cttagtggcaagcagtggaagat gcagagatgtccaatcagagtcc 6 15 15 1.1.2.2.15.15 BCBC-5A-0 14094865 P200768 Dbc1 ProximalPromoter P200768 ProximalPromoter Unique Tile chr4:68440521-68441488 (-) NM_019967 - 204 68440725 56710 Dbc1 BRINP|Brinp1|Dbccr1 deleted in bladder cancer 1 (human) MGI:1928478 Mm.248788 4 4 C2 DBC1 1620 0 aaggcctttcgttttacttcagg cctggctcatactcagccttaaa 6 15 16 1.1.2.2.16.15 BCBC-5A-0 14094884 P208520 Slc35a5 ProximalPromoter P208520 ProximalPromoter Unique Tile chr16:45078119-45079178 (-) NM_028756 - 148 45077971 74102 Slc35a5 1010001J06Rik|AU021179|BB097433|D16Ertd450e|D730043G07Rik solute carrier family 35, member A5 MGI:1921352 Mm.264984 16 16 B5|16 29.9 cM SLC35A5 55032 NM_026402 + 41 45078160 67841 Atg3 1 aagaaagctctgaatgaagccct gttgggagagtgtgagaagagga 6 15 17 1.1.2.2.17.15 BCBC-5A-0 14094903 P207716 Mettl6 ProximalPromoter P207716 ProximalPromoter Unique Tile chr14:30324003-30325031 (-) NM_025907 - 27 30323976 67011 Mettl6 1600013P15Rik|AI467521|AU020711 methyltransferase like 6 MGI:1914261 Mm.291731 14 14 B METTL6 131965 NM_028932 + 107 30324110 74427 Eaf1 1 tggtggatcaggtccatattttc agaactctctctccatggcactg 6 15 18 1.1.2.2.18.15 BCBC-5A-0 14094922 P001608 Blank P001608 Buffer Control Negative Blank 6 15 19 1.1.2.2.19.15 BCBC-5A-0 14094581 P100570 Tex9 ProximalPromoter P100570 ProximalPromoter Unique Tile chr9:72309824-72310868 (-) NM_009359 - 19301 72290523 21778 Tex9 tsec-1 testis expressed gene 9 MGI:1201610 Mm.14485 9 9 D TEX9 374618 NM_001033536 + 19938 72330806 319758 Rfxdc2 0 atcactggtaagccggtcctt gcaggtggatttctgagttcg 6 16 1 1.1.2.2.1.16 BCBC-5A-0 14094600 P101692 Actn4 ProximalPromoter P101692 ProximalPromoter Unique Tile chr7:28671345-28672373 (-) NM_021895 - 296 28671049 60595 Actn4 C77391|MGC102374 actinin alpha 4 MGI:1890773 Mm.276042 7 7 B1 ACTN4 81 NM_028659 - 18174 28690547 73830 Eif3s12 0 gagatggcccctctggttatc atttggctgcctgctatgtgt 6 16 2 1.1.2.2.2.16 BCBC-5A-0 14094619 P102453 Nqo1 ProximalPromoter P102453 ProximalPromoter Unique Tile chr8:110292596-110293535 (-) NM_008706 - 201 110292395 18104 Nqo1 AV001255|Dia4|NMO1|Nmo-1|Nmor1|Ox-1|Ox1|QR1 NAD(P)H dehydrogenase, quinone 1 MGI:103187 Mm.252 8 8 D3|8 53.3 cM NQO1 1728 NM_026277 - 20632 110314167 67619 Nob1 0 cctgctgcagctgatatttcttt caagacctcctgggtacaaaatg 6 16 3 1.1.2.2.3.16 BCBC-5A-0 14094638 P103575 Sall1 ProximalPromoter P103575 ProximalPromoter Unique Tile chr8:91932889-91933858 (-) NM_021390 - 345 91932544 58198 Sall1 Msal-3 sal-like 1 (Drosophila) MGI:1889585 Mm.214361 8 8 D SALL1 6299 1 agcgctgcttagcacagaattag gactcttggttaaccctcttggc 6 16 4 1.1.2.2.4.16 BCBC-5A-0 14094657 P106640 Col13a1 DistalPromoter P106640 DistalPromoter Unique Tile chr10:61376018-61377912 (-) NM_007731 - 1553 61374465 12817 Col13a1 - procollagen, type XIII, alpha 1 MGI:1277201 Mm.300931 10 10 B4|10 31.5 cM COL13A1 1305 0 tgtggtggaggtatcaggaagaa ggaaattgagcaagttgaggctt 6 16 5 1.1.2.2.5.16 BCBC-5A-0 14094676 P106972 Scd1 DistalPromoter P106972 DistalPromoter Unique Tile chr19:44460968-44462887 (-) NM_009127 - 10 44460978 20249 Scd1 AA589638|AI265570|SCD|Scd-1|ab stearoyl-Coenzyme A desaturase 1 MGI:98239 Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377; Mm.193096; Mm.267377 19 19 C3|19 43.0 cM 1 ccccaaagctttctcactagcat caaagggtaaagagcgcagagat 6 16 6 1.1.2.2.6.16 BCBC-5A-0 14094695 P105231 Tmem27 DistalPromoter P105231 DistalPromoter Unique Tile chrX:159431257-159433223 (+) NM_020626 + 1068 159434291 57394 Tmem27 0610008J07Rik|NX-17|NX17|NX=17|collectrin transmembrane protein 27 MGI:1926234 Mm.143766 X X F5 TMEM27 57393 NM_009173 - 11017 159420240 20438 Siah1b 0 cacctctctgtgcctctctcttg aagtcctgagtgggaagatgagc 6 16 7 1.1.2.2.7.16 BCBC-5A-0 14094714 P106082 Kcne1l DistalPromoter P106082 DistalPromoter Unique Tile chrX:137553982-137555819 (-) NM_021487 - 1416 137552566 66240 Kcne1l 1500015C14Rik|Kcne5|Mink potassium voltage-gated channel, Isk-related family, member 1-like MGI:1913490 Mm.58507 X X F1 KCNE1L 23630 0 agaaagacaggttactggggcag ggaacttgagttgcagacggtta 6 16 8 1.1.2.2.8.16 BCBC-5A-0 14094733 P001153 Blank P001153 Buffer Control Negative Blank 6 16 9 1.1.2.2.9.16 BCBC-5A-0 14094752 P202203 Pank4 ProximalPromoter P202203 ProximalPromoter Unique Tile chr4:153806983-153808073 (+) NM_172990 + 141 153807932 269614 Pank4 D030031I12Rik|R75150 pantothenate kinase 4 MGI:2387466 Mm.30042 4 4 E2 PANK4 55229 NM_010419 + 2211 153804772 15208 Hes5 0 aacttctacagatggggaggagg ctacctatatcaatggcgaagcg 6 16 10 1.1.2.2.10.16 BCBC-5A-0 14094771 P201693 Thrap5 ProximalPromoter P201693 ProximalPromoter Unique Tile chr10:79312239-79313299 (-) NM_198107 - 218 79312021 216154 Thrap5 95kDa|A630083L04|Trap95 thyroid hormone receptor associated protein 5 MGI:2158394 Mm.260089 10 10 C1 THRAP5 10025 NM_177994 - 6741 79320040 109284 C030046I01Rik 0 ctgtggtcactgcagaggtctta aacagcacaaaaggaaactcacc 6 16 11 1.1.2.2.11.16 BCBC-5A-0 14094790 P201372 5430435G22Rik ProximalPromoter P201372 ProximalPromoter Unique Tile chr1:133514952-133516018 (+) NM_145509 + 252 133516270 226421 5430435G22Rik - RIKEN cDNA 5430435G22 gene MGI:2442295 Mm.44508 1 1 E4 NM_007799 + 49093 133465859 13034 Ctse 0 ctttccaaatgcagggttctatg cttgtagggacatctgcctctgt 6 16 12 1.1.2.2.12.16 BCBC-5A-0 14094809 P204747 Ntrk2 ProximalPromoter P204747 ProximalPromoter Unique Tile chr13:58817402-58818492 (+) NM_008745;NM_001025074; + 564 58817928 18212 Ntrk2 AI848316|C030027L06Rik|Tkrb|trkB neurotrophic tyrosine kinase, receptor, type 2 MGI:97384 Mm.130054 13 13 B1|13 36.0 cM NTRK2 4915 0 taattttctggagtttctgcccc ctcagtacaccaaatcctagcgg 6 16 13 1.1.2.2.13.16 BCBC-5A-0 14094828 P205410 Fmn1 ProximalPromoter P205410 ProximalPromoter Unique Tile chr2:113127247-113128310 (+) NM_010230 + 310 113128620 14260 Fmn1 Fmn|formin-1|ld formin 1 MGI:101815 Mm.4938 2 2 C1-qter|2 65.0 cM FMN1 342184 NM_029232 + 40677 113086570 75275 4930563P21Rik 0 gtttatctccaagggggaaaatg gctaagtctaagtgaacggcgaa 6 16 14 1.1.2.2.14.16 BCBC-5A-0 14094847 P206648 Ndufb11 ProximalPromoter P206648 ProximalPromoter Unique Tile chrX:19774259-19775311 (-) NM_019435 - 254 19774513 104130 Ndufb11 D5Bwg0566e|D5Bwg0577e|NP15.6|Np15 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11 MGI:1349919 Mm.30084 X X A1.3 NDUFB11 54539 NM_145627 + 1643 19776954 236732 Rbm10 0 gttcggtgggcaaatacagtaag gagggagacggaaatacaatgtg 6 16 15 1.1.2.2.15.16 BCBC-5A-0 14094866 P200702 Irak1bp1 ProximalPromoter P200702 ProximalPromoter Unique Tile chr9:82625229-82626275 (+) NM_022986 + 441 82626716 65099 Irak1bp1 4921528N06Rik|AI851240|AIP70|Aabp3|SIMPL interleukin-1 receptor-associated kinase 1 binding protein 1 MGI:1929475 Mm.41415 9 9 E2 IRAK1BP1 134728 0 ggtccaccaaaaagaacaaagaa gtgagagtttggacactatgggg 6 16 16 1.1.2.2.16.16 BCBC-5A-0 14094885 P208544 2300002G24Rik ProximalPromoter P208544 ProximalPromoter Unique Tile chr3:93101314-93102387 (-) NM_028798 - 225 93101089 74175 2300002G24Rik AA589624 RIKEN cDNA 2300002G24 gene MGI:1921425 Mm.35806 3 3 F2.1 C1orf42 54544 NM_025420 - 2076 93104463 66203 Lce5a 0 tcctatcaccctggttttcttca ggagggctgtatgtgcttagaga 6 16 17 1.1.2.2.17.16 BCBC-5A-0 14094904 P207740 Atp5e ProximalPromoter P207740 ProximalPromoter Unique Tile chr2:174107281-174108276 (-) NM_025983 - 251 174107030 67126 Atp5e 2410043G19Rik|ATPE|AV000645 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit MGI:1855697 Mm.20841 2 2 H4 ATP5E 514 NM_025531 - 7604 174115880 66390 2310042G06Rik 0 ctggaaaccagtgtttggatttg ggattccatttgtactcaggcag 6 16 18 1.1.2.2.18.16 BCBC-5A-0 14094923 P001704 Blank P001704 Buffer Control Negative Blank 6 16 19 1.1.2.2.19.16 BCBC-5A-0 14094582 P100876 Mafk ProximalPromoter P100876 ProximalPromoter Unique Tile chr5:140043151-140044055 (+) NM_010757 + 14 140044041 17135 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) MGI:99951 Mm.157313 5 5 G2|5 79.8 cM MAFK 7975 NM_026748 - 15024 140028127 68510 1110015K06Rik 1 agtgaggtggctcagtgggta aagaacaacaagtccctgcca 6 17 1 1.1.2.2.1.17 BCBC-5A-0 14094601 P101716 Slc15a3 ProximalPromoter P101716 ProximalPromoter Unique Tile chr19:10908535-10909549 (+) NM_023044 + 39 10909588 65221 Slc15a3 Ci1|cI-1 solute carrier family 15, member 3 MGI:1929691 Mm.218870 19 19 B SLC15A3 51296 NM_001037801;NM_009852; - 11437 10897098 12511 Cd6 0 ccaccatggggtagagcataa ctgggcttcccctttttactg 6 17 2 1.1.2.2.2.17 BCBC-5A-0 14094620 P102477 Pde6b ProximalPromoter P102477 ProximalPromoter Unique Tile chr5:108627594-108628625 (+) NM_008806 + 116 108628741 18587 Pde6b Pdeb|r|rd|rd-1|rd1|rd10 phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide MGI:97525 Mm.1372 5 5 F|5 57.0 cM PDE6B 5158 NM_007507 - 46047 108674672 11958 Atp5k 0 agaaaccaacaccaggacaccta ctgactcataccacatgagtggc 6 17 3 1.1.2.2.3.17 BCBC-5A-0 14094639 P103599 Cope ProximalPromoter P103599 ProximalPromoter Unique Tile chr8:73230900-73231860 (+) NM_021538 + 69 73231791 59042 Cope 1110005D17Rik|Cope1 coatomer protein complex, subunit epsilon MGI:1891702 Mm.28668 8 8 B3.3 COPE 11316 NM_001024922 - 412 73231448 234374 Ddx49 0 cttgcttccacctgctcagtatt acgtcgaacagctcatctacctc 6 17 4 1.1.2.2.4.17 BCBC-5A-0 14094658 P105664 DistalPromoter P105664 DistalPromoter No Hits Tile 0 cattttgtgtgtgtgggatcctt tccacaagacagcatttgtgaaa 6 17 5 1.1.2.2.5.17 BCBC-5A-0 14094677 P106993 Stat1 DistalPromoter P106993 DistalPromoter Unique Tile chr1:52063698-52065803 (+) NM_009283 + 1757 52064046 20846 Stat1 2010005J02Rik|AA408197 signal transducer and activator of transcription 1 MGI:103063 Mm.277406 1 1 C1.1|1 25.9 cM STAT1 6772 0 cctggctttagtagcgtgaaggt aagaaggccacaagttcaaggtc 6 17 6 1.1.2.2.6.17 BCBC-5A-0 14094696 P105255 Hnrph1 DistalPromoter P105255 DistalPromoter Unique Tile chr11:50218458-50220320 (+) NM_021510 + 871 50221191 59013 Hnrph1 E430005G16Rik|Hnrnph heterogeneous nuclear ribonucleoprotein H1 MGI:1891925 Mm.21740 11 11 B1.2 HNRPH1 3187 NM_007597 - 49443 50169015 12330 Canx 0 caagttctaggccagacagggat tgcccttacagaggtaaatgggt 6 17 7 1.1.2.2.7.17 BCBC-5A-0 14094715 P106103 Niban DistalPromoter P106103 DistalPromoter Unique Tile chr1:153330904-153332740 (+) NM_022018 + 1017 153333757 63913 Niban AI256368 niban protein MGI:2137237 Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569; Mm.157700; Mm.380569 1 1 G2 C1orf24 116496 0 ggttcaggggtctgtccattatc ccctcgtttctcacattaagcct 6 17 8 1.1.2.2.8.17 BCBC-5A-0 14094734 P201761 Tmem115 ProximalPromoter P201761 ProximalPromoter Unique Tile chr9:107390975-107391977 (+) NM_019704 + 68 107392045 56395 Tmem115 C78915|Pl6|Pp6 transmembrane protein 115 MGI:1930765 Mm.260153 9 9 F1 TMEM115 11070 NM_019720 - 7989 107399966 56368 Cyb561d2 1 agggtttctctgtatagccctgg gggagcttgggagttgtagtttt 6 17 9 1.1.2.2.9.17 BCBC-5A-0 14094753 P202228 Hectd3 ProximalPromoter P202228 ProximalPromoter Unique Tile chr4:116492119-116493104 (+) NM_175244 + 175 116493279 76608 Hectd3 1700064K09Rik|AI467540|AW743312 HECT domain containing 3 MGI:1923858 Mm.251420 4 4 D1 HECTD3 79654 NM_009478 - 188 116492307 22275 Urod 0 tgactgcaagatttggaatctca tttggagtcctgtctttgtctcc 6 17 10 1.1.2.2.10.17 BCBC-5A-0 14094772 P201718 A730037C10Rik ProximalPromoter P201718 ProximalPromoter Unique Tile chr3:55224016-55225051 (+) NM_177203 + 216 55225267 320604 A730037C10Rik - RIKEN cDNA A730037C10 gene MGI:2444356 Mm.213909 3 3 C NM_144895 + 23948 55200068 229285 Spg20 0 tgcactaattgtggctcttttga gggcaaatgtctgtcctgtattc 6 17 11 1.1.2.2.11.17 BCBC-5A-0 14094791 P201396 Clcn3 ProximalPromoter P201396 ProximalPromoter Unique Tile chr8:63875384-63876471 (-) NM_173876;NM_007711; - 58 63875442 12725 Clcn3 Clc3 chloride channel 3 MGI:103555 Mm.259751 8 8 B3.1|8 32.2 cM CLCN3 1182 NM_177148 + 194 63875578 320383 B230317F23Rik 1 accaaccaaccaaacaaacaaac actggaagagaagctgcaggagt 6 17 12 1.1.2.2.12.17 BCBC-5A-0 14094810 P204680 Pias2 ProximalPromoter P204680 ProximalPromoter Unique Tile chr18:77268448-77269392 (+) NM_008602 + 265 77269657 17344 Pias2 6330408K17Rik|AI462206|ARIP3|AU018068|Dib|Miz1|PIASxalpha|PIASxb|PIASxbeta|SIZ2 protein inhibitor of activated STAT 2 MGI:1096566 Mm.6370 18 18 E3 PIAS2 9063 NM_027721 - 16702 77251746 71206 3110023G01Rik 0 tatggcctaaccttatcaaggca cgagagaagagagtggacaggac 6 17 13 1.1.2.2.13.17 BCBC-5A-0 14094829 P205434 Gk2 ProximalPromoter P205434 ProximalPromoter Unique Tile chr5:97697202-97698153 (-) NM_010294 - 87 97697289 14626 Gk2 GKTA|Gk-rs2 glycerol kinase 2 MGI:1329027 Mm.61206 5 5 E3|5 53.0 cM GK2 2712 0 gtcggcttgaagacagagtgatt tagaaagcgagtggagttggttc 6 17 14 1.1.2.2.14.17 BCBC-5A-0 14094848 P206672 Vdp ProximalPromoter P206672 ProximalPromoter Unique Tile chr5:93212215-93213308 (+) NM_019490 + 171 93213137 56041 Vdp 115kDa|TAP vesicle docking protein MGI:1929095 Mm.15868 5 5 E3 VDP 8615 2 tctgagacctatggggaattgaa aggaaattcatcttgtcgctcag 6 17 15 1.1.2.2.15.17 BCBC-5A-0 14094867 P200726 Pigh ProximalPromoter P200726 ProximalPromoter Unique Tile chr12:80008384-80009341 (-) NM_029988 - 77 80008461 110417 Pigh 2210416H01Rik|A930028P05Rik|MGC102258 phosphatidylinositol glycan anchor biosynthesis, class H MGI:99463 Mm.281044 12 12 D2|12 29.0 cM PIGH 5283 NM_009705 + 40322 80049663 11847 Arg2 0 tttgacagacaaacccctcattt agtacggtgagtagtagcggcac 6 17 16 1.1.2.2.16.17 BCBC-5A-0 14094886 P209536 Arhgap4 ProximalPromoter P209536 ProximalPromoter Unique Tile chrX:70163866-70164923 (-) NM_138630 - 83 70163949 171207 Arhgap4 A130009C12Rik|A530015A20Rik|MGC124367|MGC124368|c1|mKIAA0131 Rho GTPase activating protein 4 MGI:2159577 Mm.246654 X X A7.3 ARHGAP4 393 NM_019870 - 9642 70174565 56292 Ard1 0 ggttgtgcacatatgcaatccta ctaaagcaccctctcacctttga 6 17 17 1.1.2.2.17.17 BCBC-5A-0 14094905 P207764 2610206B13Rik ProximalPromoter P207764 ProximalPromoter End Repeat Tile chr14:103408543-103409464 (-) NM_026047 - 198 103408345 72486 2610206B13Rik 2810449K13Rik|AI451544|MGC35679 RIKEN cDNA 2610206B13 gene MGI:1919736 Mm.291811 14 14 E2.2 C13orf7 79596 1 cacacacacacacacacacacac cgagagggtctgagacttcaaaa 6 17 18 1.1.2.2.18.17 BCBC-5A-0 14094924 P001704 Blank P001704 Buffer Control Negative Blank 6 17 19 1.1.2.2.19.17 BCBC-5A-0 14094583 P100900 Ndrg1 ProximalPromoter P100900 ProximalPromoter Unique Tile chr15:66799646-66800653 (-) NM_010884 - 338 66799308 17988 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 MGI:1341799 Mm.30837 15 15 D2 NDRG1 10397 NM_008681 - 356 66799290 17990 Ndrl 0 cattttgctatgtcccccaaa actcccttgtgtctctctgcg 6 18 1 1.1.2.2.1.18 BCBC-5A-0 14094602 P101650 Rnase4 ProximalPromoter P101650 ProximalPromoter Unique Tile chr14:50012384-50013292 (+) NM_021472;NM_201239; + 139 50013153 58809 Rnase4 C730049F20Rik|RNase 4 ribonuclease, RNase A family 4 MGI:1926217 Mm.202665 14 - RNASE4 6038 NM_007447 + 5071 50018363 11727 Ang1 0 ctgcatcctctgatcccattc agaagtcatctcccaggagcc 6 18 2 1.1.2.2.2.18 BCBC-5A-0 14094621 P102501 Prkcm ProximalPromoter P102501 ProximalPromoter Unique Tile chr12:51571041-51571881 (-) NM_008858 - 64 51571105 18760 Prkcm PKD|PKD1|Pkcm protein kinase C, mu MGI:99879 Mm.133719 12 12 C1 PRKD1 5587 1 gcctgttaaaccaaatagggtcc ggagaagaaccaccaaactttcc 6 18 3 1.1.2.2.3.18 BCBC-5A-0 14094640 P103623 Foxb1 ProximalPromoter P103623 ProximalPromoter Unique Tile chr9:69559688-69560760 (-) NM_022378 - 127 69559815 64290 Foxb1 C43|Fkh5|Foxb1a|Foxb1b|Hfh-e5.1|MGC130499|Mf3|Twh forkhead box B1 MGI:1927549 Mm.186434 9 9 D|9 41.0 cM FOXB1 27023 1 gttaaaggctaggctcacaacca ggggacagagagatagatgctca 6 18 4 1.1.2.2.4.18 BCBC-5A-0 14094659 P106604 Bcl6b DistalPromoter P106604 DistalPromoter Unique Tile chr11:70046355-70048495 (-) NM_007528 - 402 70045953 12029 Bcl6b Bazf B-cell CLL/lymphoma 6, member B MGI:1278332 Mm.12930 11 11 B4 BCL6B 255877 NM_026757 - 5554 70054049 104457 0610010K14Rik 0 ccataagaaatcggggttcagag acagtccaagtggtatcgggttt 6 18 5 1.1.2.2.5.18 BCBC-5A-0 14094678 P107093 Serping1 DistalPromoter P107093 DistalPromoter Unique Tile chr2:84577342-84579162 (-) NM_009776 - 1099 84576243 12258 Serping1 C1INH|C1nh serine (or cysteine) peptidase inhibitor, clade G, member 1 MGI:894696 Mm.38888 2 2 D SERPING1 710 NM_019949 + 20526 84599688 56791 Ube2l6 0 cataagctggcctctcaaggatt aactcagaaatctgcctgcctct 6 18 6 1.1.2.2.6.18 BCBC-5A-0 14094697 P105279 Gnas DistalPromoter P105279 DistalPromoter Unique Tile chr2:173923974-173926059 (+) NM_010309;NM_019690;NM_022000;NM_010310; + 1210 173927269 14683 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Gnas1|Gnasxl|Gs-alpha|Gsa|MGC118029|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|XLalphas GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus MGI:95777 Mm.125770 2 2 E1-H3|2 104.0 cM GNAS 2778 0 ttgctctgcacatcaaacaggta tgaagtcttggcagggtgtttta 6 18 7 1.1.2.2.7.18 BCBC-5A-0 14094716 P106125 B230120H23Rik DistalPromoter P106125 DistalPromoter Unique Tile chr2:72096163-72097971 (+) NM_023057;NM_178084; + 1054 72099025 65964 B230120H23Rik AV006891|MLTK|MLTKalpha|MLTKbeta|Zak RIKEN cDNA B230120H23 gene MGI:2443258 Mm.314618 2 2 C3 ZAK 51776 0 aagtcatgagttcgtttcccaca tcactttctgccttgatcctctg 6 18 8 1.1.2.2.8.18 BCBC-5A-0 14094735 P201786 A930001M12Rik ProximalPromoter P201786 ProximalPromoter Unique Tile chr4:40659748-40660820 (+) NM_177175 + 30 40660850 320500 A930001M12Rik - RIKEN cDNA A930001M12 gene MGI:2444167 Mm.156365 4 4 A5 LOC401498 401498 0 ggggtagatctgagggaggtaga tatccactgaacagcgaagaaca 6 18 9 1.1.2.2.9.18 BCBC-5A-0 14094754 P202161 Cyp2r1 ProximalPromoter P202161 ProximalPromoter Unique Tile chr7:114354396-114355352 (-) NM_177382 - 243 114354153 244209 Cyp2r1 MGC124198|MGC124199 cytochrome P450, family 2, subfamily r, polypeptide 1 MGI:2449771 Mm.108037 7 7 F1 CYP2R1 120227 2 aaatgatgtgagagaagaaggcg ttccggaatgttgtcagtaggtt 6 18 10 1.1.2.2.10.18 BCBC-5A-0 14094773 P201742 Cryl1 ProximalPromoter P201742 ProximalPromoter Unique Tile chr14:56352505-56353454 (-) NM_030004 - 88 56352593 68631 Cryl1 1110025H08Rik|A230106J09Rik|C85932 crystallin, lamda 1 MGI:1915881 Mm.25539 14 14 C3|14 20.0 cM CRYL1 51084 NM_009376 + 24746 56378200 21821 Ift88 0 tcaaagtgtttccacttccgatt ctgagacctttacctgcctacga 6 18 11 1.1.2.2.11.18 BCBC-5A-0 14094792 P201420 Oas1c ProximalPromoter P201420 ProximalPromoter Unique Tile chr5:121073013-121074106 (-) NM_033541 - 118 121073131 114643 Oas1c MGC124107|Oasl2|Oasl5 2'-5' oligoadenylate synthetase 1C MGI:2149633 Mm.43230 5 5 F|5 67.0 cM NM_011853 + 238 121073251 23961 Oas1b 0 ttctgaccaaacctgcactaaca cccttcttctacgtgcacagatt 6 18 12 1.1.2.2.12.18 BCBC-5A-0 14094811 P204705 Myo1c ProximalPromoter P204705 ProximalPromoter Unique Tile chr11:75466453-75467520 (+) NM_008659 + 252 75467772 17913 Myo1c C80397|MMIb|MYO1E|mm1beta|myr2 myosin IC MGI:106612 Mm.234502 11 11 C-E1|11 44.13 cM MYO1C 4641 NM_008916 + 19239 75447214 19062 RP23-136K12.4 2 ctaaggggtctgtcctcttggtt gtagaagacccaactcacgctgt 6 18 13 1.1.2.2.13.18 BCBC-5A-0 14094830 P202541 BC050188 ProximalPromoter P202541 ProximalPromoter Unique Tile chr8:44640189-44641241 (-) NM_177742 - 114 44640303 244448 BC050188 4933403D14 cDNA sequence BC050188 MGI:2687279 Mm.64542 8 8 A4 FLJ36180 339976 0 catgacattctggttttatggca cattttctcatggttggacatca 6 18 14 1.1.2.2.14.18 BCBC-5A-0 14094849 P206697 Rhog ProximalPromoter P206697 ProximalPromoter Unique Tile chr7:102124097-102125055 (-) NM_019566 - 180 102123917 56212 Rhog Arhg|Sid10750 ras homolog gene family, member G MGI:1928370 Mm.259795 7 7 F1 RHOG 391 NM_009287 + 16598 102141653 20866 Stim1 0 acagtaccacagcacggatacct acaccctgcttctctccactctt 6 18 15 1.1.2.2.15.18 BCBC-5A-0 14094868 P200750 Rnf133 ProximalPromoter P200750 ProximalPromoter Unique Tile chr6:23600178-23601222 (-) NM_198251 - 30 23600208 386611 Rnf133 Greul2 ring finger protein 133 MGI:2677436 Mm.379572 6 6 A3.1 RNF133 168433 1 agggtttctctgtatagccctgg acactgtcttccagcatgtttca 6 18 16 1.1.2.2.16.18 BCBC-5A-0 14094887 P209560 Ssx2ip ProximalPromoter P209560 ProximalPromoter Unique Tile chr3:146340861-146341764 (+) NM_138744 + 300 146342064 99167 Ssx2ip AU014939|AU042321|Adip synovial sarcoma, X breakpoint 2 interacting protein MGI:2139150 Mm.200783 3 3 H2 SSX2IP 117178 NM_028836 + 46114 146387878 74245 Ctbs 1 gagtggacaagggaactttcaga atgctctctggagaaccaggtg 6 18 17 1.1.2.2.17.18 BCBC-5A-0 14094906 P207698 2310028N02Rik ProximalPromoter P207698 ProximalPromoter Unique Tile chr1:193025409-193026413 (+) NM_025864 + 166 193026579 66950 2310028N02Rik AI118576 RIKEN cDNA 2310028N02 gene MGI:1914200 Mm.236300 1 1 H6 C1orf75 55248 NM_025424 - 6676 193018733 66208 Nenf 0 ccatgaccaatattaggctggaa atagcctcgcacttcctctcttt 6 18 18 1.1.2.2.18.18 BCBC-5A-0 14094925 P001800 Cy3 Anchor P001800 Anchor Control Positive Cy3 Anchor 6 18 19 1.1.2.2.19.18 BCBC-5A-0 14094584 P100924 Pcna ProximalPromoter P100924 ProximalPromoter Unique Tile chr2:131945231-131946229 (-) NM_011045 - 610 131944621 18538 Pcna - proliferating cell nuclear antigen MGI:97503 Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141; Mm.391640; Mm.7141 2 2 F2|2 75.0 cM PCNA 5111 NM_027478 - 6008 131939223 70612 5730494N06Rik 0 gccatcagagtggtcgagagt ttaggctgaagatgaacccga 6 19 1 1.1.2.2.1.19 BCBC-5A-0 14094603 P101674 Rnf130 ProximalPromoter P101674 ProximalPromoter Unique Tile chr11:49867208-49868161 (+) NM_021540 + 592 49868753 59044 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 MGI:1891717 Mm.359004 11 11 B1.2 RNF130 55819 0 acctgcaaaggtggtagctga acatttccactgggttggttg 6 19 2 1.1.2.2.2.19 BCBC-5A-0 14094622 P102807 Fasl ProximalPromoter P102807 ProximalPromoter Unique Tile chr1:163625091-163626128 (-) NM_010177 - 28 163625119 14103 Fasl APT1LG1|CD178|CD95L|Fas-L|Fas-Ligand|Tnfsf6|gld Fas ligand (TNF superfamily, member 6) MGI:99255 Mm.3355 1 1 H2.1|1 85.0 cM FASLG 356 0 ctttgggagttgttttggcatag gggaaacacctttctcctgttct 6 19 3 1.1.2.2.3.19 BCBC-5A-0 14094641 P103647 Dusp12 ProximalPromoter P103647 ProximalPromoter Unique Tile chr1:172722266-172723250 (-) NM_023173 - 51 172722215 80915 Dusp12 1190004O14Rik|AA027408|AW049275|ESTM36|LMW-DSP4|MGC117646|T-DSP4|VH1|mVH1 dual specificity phosphatase 12 MGI:1890614 Mm.34365 1 1 H3 DUSP12 11266 NM_001029984 - 26366 172749616 435653 Fcrlb 0 ggatctttctgcttttcccctta tccatttagagcagcttttccac 6 19 4 1.1.2.2.4.19 BCBC-5A-0 14094660 P106626 Ccnd3 DistalPromoter P106626 DistalPromoter Unique Tile chr17:47054533-47056648 (+) NM_007632 + 90 47056738 12445 Ccnd3 AA682053|AL024085|AW146355|C78795 cyclin D3 MGI:88315 Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688; Mm.246520; Mm.318688 17 17 C|17 28.8 cM CCND3 896 NM_016859 - 17750 47074398 53414 Bysl 0 tgggggctattctggtctaccta gtggaatgctcctacgtcacaac 6 19 5 1.1.2.2.5.19 BCBC-5A-0 14094679 P107115 Cdh5 DistalPromoter P107115 DistalPromoter Unique Tile chr8:107011979-107013721 (+) NM_009868 + 22894 106990827 12562 Cdh5 7B4|AA408225|CD144|VE-Cad|VEC cadherin 5 MGI:105057 Mm.21767 8 8 D3|8 51.0 cM CDH5 1003 0 ctgggtcaatcatggtagtgcat gctcttccttcctgaacgtttgt 6 19 6 1.1.2.2.6.19 BCBC-5A-0 14094698 P105213 Dolpp1 DistalPromoter P105213 DistalPromoter Unique Tile chr2:30211192-30213201 (+) NM_020329 + 1223 30214424 57170 Dolpp1 0610011H20Rik|AB030189|LSFR2 dolichyl pyrophosphate phosphatase 1 MGI:1914093 Mm.285167 2 2 B DOLPP1 57171 NM_007760 - 24303 30237504 12908 Crat 0 gaaatctgatgccctcttctggt aaaaataaaagcaggttccgggt 6 19 7 1.1.2.2.7.19 BCBC-5A-0 14094717 P106147 Ubap1 DistalPromoter P106147 DistalPromoter Unique Tile chr4:41534361-41536461 (+) NM_023305 + 1257 41537718 67123 Ubap1 2700092A01Rik|NAG20|Ubap ubiquitin-associated protein 1 MGI:2149543 Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298; Mm.289795; Mm.410298 4 4 B1 UBAP1 51271 NM_026893 - 30874 41503487 68970 Wdr40a 0 ggagacaaacaggaagagggtgt tgactctcttgtttgaagcaggg 6 19 8 1.1.2.2.8.19 BCBC-5A-0 14094736 P201811 Slc8a3 ProximalPromoter P201811 ProximalPromoter Unique Tile chr12:82252034-82253092 (-) NM_080440 - 6 82252028 110893 Slc8a3 AW742262|MGC90626|Ncx3 solute carrier family 8 (sodium/calcium exchanger), member 3 MGI:107976 Mm.149463 12 12 D1|12 41.0 cM SLC8A3 6547 NM_001038995 - 45138 82298230 214321 Adam4b 0 tcctcttatgcttggcttcagac agcctagagctttgcccattaag 6 19 9 1.1.2.2.9.19 BCBC-5A-0 14094755 P202185 Sh2d4b ProximalPromoter P202185 ProximalPromoter Unique Tile chr14:39762066-39762973 (-) NM_177816 - 39612 39801678 328381 Sh2d4b A430109M18Rik|D030001E08 SH2 domain containing 4B MGI:1925182 Mm.235694 14 14 B SH2D4B 387694 0 tgtgctttcttctgttgttggaa agctttccccatcttatctttgc 6 19 10 1.1.2.2.10.19 BCBC-5A-0 14094774 P205647 Mx1 ProximalPromoter P205647 ProximalPromoter Unique Tile chr16:97567927-97569000 (-) NM_010846 - 112 97567815 17857 Mx1 AI893580|Mx|Mx-1 myxovirus (influenza virus) resistance 1 MGI:97243 Mm.33996 16 16 71.2 cM MX2 4600 0 aagtctatcacccactgatccca tgaaaggagctcagaaacgaaac 6 19 11 1.1.2.2.11.19 BCBC-5A-0 14094793 P201444 A030008J09 ProximalPromoter P201444 ProximalPromoter Unique Tile chr13:41659549-41660536 (+) NM_177808 + 120 41660416 328231 A030008J09 - hypothetical protein A030008J09 Mm.227476 13 13 A4 0 gctgaacaagcctgaaaaagaaa ctcataccaacccaaacaacaca 6 19 12 1.1.2.2.12.19 BCBC-5A-0 14094812 P204729 Nos3 ProximalPromoter P204729 ProximalPromoter Unique Tile chr5:23873702-23874619 (+) NM_008713 + 264 23874883 18127 Nos3 2310065A03Rik|Nos-3|eNOS|ecNOS nitric oxide synthase 3, endothelial cell MGI:97362 Mm.258415 5 5 A3|5 9.0 cM NOS3 4846 NM_013569 - 12033 23861669 16511 Kcnh2 0 aaggataggtggctccctacttg gtctgctagagggtgggaaagat 6 19 13 1.1.2.2.13.19 BCBC-5A-0 14094831 P202566 Frk ProximalPromoter P202566 ProximalPromoter End Repeat Tile chr10:34172029-34173078 (+) NM_010237 + 264 34172814 14302 Frk BSK|BSK/IYK|C85044|GTK|RAK fyn-related kinase MGI:103265 Mm.332432 10 10 B1 FRK 2444 1 gtgtgtgtgtgtgtgtgtgtgtg gtccccggaaaaagttagagaga 6 19 14 1.1.2.2.14.19 BCBC-5A-0 14094850 P206628 Lsp1 ProximalPromoter P206628 ProximalPromoter Unique Tile chr7:142280092-142281000 (+) NM_019391 + 232 142281232 16985 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 MGI:96832 Mm.234003 7 7 F5|7 69.0 cM LSP1 4046 NM_011620 + 27232 142308232 21957 Tnnt3 2 gtgcctattttccaagtgtggag cataggtcacctcaccatcatca 6 19 15 1.1.2.2.15.19 BCBC-5A-0 14094869 P200774 Meox2 ProximalPromoter P200774 ProximalPromoter Unique Tile chr12:37618026-37619013 (+) NM_008584 + 101 37618912 17286 Meox2 AI528662|Gax|Mox-2|Mox2 mesenchyme homeobox 2 MGI:103219 Mm.341398 12 12 A3|12 20.0 cM MEOX2 4223 0 gcgaactggactggtaaagagaa cctaagactttcccccactcact 6 19 16 1.1.2.2.16.19 BCBC-5A-0 14094888 P209585 Fus ProximalPromoter P209585 ProximalPromoter Unique Tile chr7:127757525-127758521 (+) NM_139149 + 127 127758648 233908 Fus D430004D17Rik|D930039C12Rik|Fus1|Tls fusion, derived from t(12;16) malignant liposarcoma (human) MGI:1353633 Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028; Mm.277680; Mm.29028 7 7 F3 FUS 2521 NM_176936 + 15705 127774226 319527 B230325K18Rik 0 ccttgaatttcgttttgtccttg gatacggagagctcaggaagaca 6 19 17 1.1.2.2.17.19 BCBC-5A-0 14094907 P207722 Pmf1 ProximalPromoter P207722 ProximalPromoter Unique Tile chr3:88496111-88497127 (-) NM_025928 - 130 88496241 67037 Pmf1 2600009M07Rik|AL033286|AW060657 polyamine-modulated factor 1 MGI:1914287 Mm.36715 3 3 F1 PMF1 11243 NM_178696 - 13886 88511013 229517 B430110G05Rik 0 ctccacctcctaagttccaggtt aagtgtctactatggcgtccagg 6 19 18 1.1.2.2.18.19 BCBC-5A-0 14094926 P001896 Cy3 Anchor P001896 Anchor Control Positive Cy3 Anchor 6 19 19 1.1.2.2.19.19 BCBC-5A-0 14094927 P100288 Kpnb1 ProximalPromoter P100288 ProximalPromoter Unique Tile chr11:97004054-97004770 (-) NM_008379 - 72 97003982 16211 Kpnb1 AA409963|IPOB|Impnb|MGC8315 karyopherin (importin) beta 1 MGI:107532 Mm.251013 11 11 D KPNB1 3837 NM_198100 - 38252 96965802 73174 Tbkbp1 1 tctctctgggcttcagtttgc gatatccttgccggacctctc 7 1 1 1.1.2.3.1.1 BCBC-5A-0 14094946 P101128 Nubp1 ProximalPromoter P101128 ProximalPromoter Unique Tile chr16:10324150-10325178 (+) NM_011955 + 349 10325527 26425 Nubp1 - nucleotide binding protein 1 MGI:1347073 Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732; Mm.29037; Mm.325732 16 16 A1|16 3.4 cM NUBP1 4682 NM_001013778 - 35750 10360928 383103 LOC383103 0 ggtgctgctgtctatgtgctg tattctccgtggcctcagtgt 7 1 2 1.1.2.3.2.1 BCBC-5A-0 14094965 P101878 Mrps22 ProximalPromoter P101878 ProximalPromoter Unique Tile chr9:98411068-98411988 (-) NM_025485 - 57 98411011 64655 Mrps22 3100002P07Rik|Rpms22 mitochondrial ribosomal protein S22 MGI:1928137 Mm.17949 9 9 E4 MRPS22 56945 NM_015827 + 37973 98373095 50797 Copb2 0 ggaagaggtctaggagggcaa tgggaaatgtagtctgggtgg 7 1 3 1.1.2.3.3.1 BCBC-5A-0 14094984 P103011 ProximalPromoter P103011 ProximalPromoter No Hits Tile 1 cattgtgtttggagctctccttt ccagccttacttcatcttggcta 7 1 4 1.1.2.3.4.1 BCBC-5A-0 14095003 P103761 2310042G06Rik ProximalPromoter P103761 ProximalPromoter Unique Tile chr2:174116264-174117224 (-) NM_025531 - 384 174115880 66390 2310042G06Rik AA407013 RIKEN cDNA 2310042G06 gene MGI:1913640 Mm.182294 2 2 H4 C20orf45 51012 NM_025983 - 9234 174107030 67126 Atp5e 0 tctccccaagaaatcactcaaag gtcccacctcttcaatctaagca 7 1 5 1.1.2.3.5.1 BCBC-5A-0 14095022 P106723 Gata2 DistalPromoter P106723 DistalPromoter Unique Tile chr6:88156423-88158362 (+) NM_008090 + 5946 88164308 14461 Gata2 Gata-2|MGC129339 GATA binding protein 2 MGI:95662 Mm.272747 6 6 D1|6 38.5 cM GATA2 2624 NM_019964 + 29546 88187908 56691 Dnajb8 0 gcgataatctggaaggcagagat agagtatctgtggcactgggtga 7 1 6 1.1.2.3.6.1 BCBC-5A-0 14095041 P105727 Hc DistalPromoter P105727 DistalPromoter Unique Tile chr2:34884313-34886197 (-) NM_010406 - 908 34883405 15139 Hc C5|C5a|He hemolytic complement MGI:96031 Mm.2168 2 2 cen-C1|2 23.5 cM C5 727 NM_178885 - 36472 34922669 98870 AI182371 0 gaaacaagccctctccaagttgt gggtcattggatggaaaaaggta 7 1 7 1.1.2.3.7.1 BCBC-5A-0 14095060 P107545 DistalPromoter P107545 DistalPromoter No Hits Tile 0 cttccttccttcctctttccctc tacatcttcaggagcaggagtgc 7 1 8 1.1.2.3.8.1 BCBC-5A-0 14095079 P104139 Abi1 DistalPromoter P104139 DistalPromoter Unique Tile chr2:22818151-22820055 (-) NM_007380 - 1541 22816610 11308 Abi1 E3B1|MGC6064|NAP1|Ssh3bp1 abl-interactor 1 MGI:104913 Mm.205647 2 2 A3|2 15.0 cM ABI1 10006 1 ccagggctacacagagaaatcct caaccaaccttagtatgcccaca 7 1 9 1.1.2.3.9.1 BCBC-5A-0 14095098 P203083 6332401O19Rik ProximalPromoter P203083 ProximalPromoter Unique Tile chr6:24906357-24907288 (-) NM_177013 - 256 24906101 319832 6332401O19Rik - RIKEN cDNA 6332401O19 gene MGI:2442812 Mm.127446; Mm.392551; Mm.127446; Mm.392551; Mm.127446; Mm.392551; Mm.127446; Mm.392551; Mm.127446; Mm.392551; Mm.127446; Mm.392551; Mm.127446; Mm.392551 6 6 A3.1 0 agggggactaaggagtgaatgag acaggtgtgaaggctaactgtgg 7 1 10 1.1.2.3.10.1 BCBC-5A-0 14095117 P203162 ProximalPromoter P203162 ProximalPromoter No Hits Tile 0 tccaaaaaggggctcactatgta aaggccaccctaatcagctttag 7 1 11 1.1.2.3.11.1 BCBC-5A-0 14095136 P204011 Stk11ip ProximalPromoter P204011 ProximalPromoter Unique Tile chr1:75403814-75404805 (+) NM_027886 + 112 75404693 71728 Stk11ip 1200014D22Rik|BB131189|LIP1|LKB1IP serine/threonine kinase 11 interacting protein MGI:1918978 Mm.312650 1 1 C3 STK11IP 114790 NM_010564 + 13590 75390224 16322 Inha 0 gaccaagagccagggtaaaaact aacgatctctctgaccccttttc 7 1 12 1.1.2.3.12.1 BCBC-5A-0 14095155 P202632 Pcdhb11 ProximalPromoter P202632 ProximalPromoter Unique Tile chr18:37546406-37547392 (+) NM_053136 + 1 37547391 93882 Pcdhb11 Pcdhb5E|PcdhbK protocadherin beta 11 MGI:2136746 Mm.196702 18 18 B3 NM_053135 + 8555 37537851 93881 Pcdhb10 0 gaccaaagcacaatgtcatcaaa tgcagagctcattcttgacactc 7 1 13 1.1.2.3.13.1 BCBC-5A-0 14095174 P205032 Tcf1 ProximalPromoter P205032 ProximalPromoter Unique Tile chr5:115231975-115232936 (-) NM_009327 - 62 115232037 21405 Tcf1 AI323641|HNF1|HNF1-alpha|HNF1[a]|Hnf-1|Hnf1alpha|Tcf-1 transcription factor 1 MGI:98504 Mm.332607 5 5 F|5 65.0 cM TCF1 6927 NM_028211 + 28775 115203200 72357 2210016L21Rik 0 gctgtggtacgggtctgtaattc atcccactagtcaagctctgtgg 7 1 14 1.1.2.3.14.1 BCBC-5A-0 14095193 P202963 Arhgap1 ProximalPromoter P202963 ProximalPromoter Unique Tile chr2:91452717-91453801 (+) NM_146124 + 245 91454046 228359 Arhgap1 B230365D05Rik|C76222|MGC101942|MGC7050|p50rhoGAP Rho GTPase activating protein 1 MGI:2445003 Mm.22413 2 2 E1 ARHGAP1 392 NM_001033451 - 2087 91450630 381410 Zfp408 0 gttatgtgggagttggaggtcag agcaacaactgccttgttaccat 7 1 15 1.1.2.3.15.1 BCBC-5A-0 14095212 P206250 Supt5h ProximalPromoter P206250 ProximalPromoter Unique Tile chr7:28047657-28048599 (-) NM_013676 - 178 28047479 20924 Supt5h AL033283|AL033321|AU019549 suppressor of Ty 5 homolog (S. cerevisiae) MGI:1202400 Mm.285906 7 7 A3|7 10.0 cM SUPT5H 6829 NM_013647 + 10910 28059509 20055 Rps16 0 ccggcttgtcttgaatttttatg aaggtcgaaaagtaatcggcttc 7 1 16 1.1.2.3.16.1 BCBC-5A-0 14095231 P200876 Fbxl13 ProximalPromoter P200876 ProximalPromoter Unique Tile chr5:21157311-21158343 (-) NM_177076 - 118 21157429 320118 Fbxl13 4921539K22Rik F-box and leucine-rich repeat protein 13 MGI:2443416 Mm.319123 5 5 A3 FBXL13 222235 NM_026034 + 455 21157766 67211 2810037C14Rik 2 aatctacttggctcggagaaacc tccctgaagtagctccttagcct 7 1 17 1.1.2.3.17.1 BCBC-5A-0 14095250 P210181 9430022F06Rik ProximalPromoter P210181 ProximalPromoter Unique Tile chr18:9282878-9283905 (-) NM_153086 - 71 9282807 225152 9430022F06Rik Cx39|connexin 39 RIKEN cDNA 9430022F06 gene MGI:2444990 Mm.119273 18 18 A1 CX40.1 219770 0 atgacttcattggcagttaggga ttgtagctgtgcttgcttgtctc 7 1 18 1.1.2.3.18.1 BCBC-5A-0 14095269 P209384 B230342M21Rik ProximalPromoter P209384 ProximalPromoter Unique Tile chr5:150862791-150863671 (-) NM_133898 - 88 150862879 100637 B230342M21Rik AI428195 RIKEN cDNA B230342M21 gene MGI:2140872 Mm.279932 5 5 G3 1 tgtagccaaagccaccaatatct acgattccagaaaactgtcctcc 7 1 19 1.1.2.3.19.1 BCBC-5A-0 14094928 P100312 Lfng ProximalPromoter P100312 ProximalPromoter Unique Tile chr5:140858218-140859195 (+) NM_008494 + 640 140859835 16848 Lfng AW061165 lunatic fringe gene homolog (Drosophila) MGI:1095413 Mm.12834 5 5 G2|5 80.0 cM LFNG 3955 NM_175274 - 42303 140901498 78339 Ttyh3 1 ttgccaaggaatatttggtgc agcgaggagacactcaagcag 7 2 1 1.1.2.3.1.2 BCBC-5A-0 14094947 P101062 Uchl1 ProximalPromoter P101062 ProximalPromoter Unique Tile chr5:66954285-66955302 (+) NM_011670 + 99 66955401 22223 Uchl1 AW822034|C88048|PGP9.5|R75593|gad ubiquitin carboxy-terminal hydrolase L1 MGI:103149 Mm.29807 5 5 C3.1|5 36.0 cM UCHL1 7345 0 aggttggttccctccatccta ggagcagaaacaagcagagga 7 2 2 1.1.2.3.2.2 BCBC-5A-0 14094966 P101902 Ctrb1 ProximalPromoter P101902 ProximalPromoter Unique Tile chr8:114577795-114578837 (-) NM_025583 - 112 114577683 66473 Ctrb1 2200008D09Rik|AI504462|Ctrb|Prt-2 chymotrypsinogen B1 MGI:88559 Mm.34374 8 8 E1|8 57.0 cM CTRB1 1504 NM_001037665;NM_011742; + 47589 114530206 22640 Zfp1 0 aatgcgtgttggcattttacc cagagaccttgggtggaagtg 7 2 3 1.1.2.3.3.2 BCBC-5A-0 14094985 P103035 Ncor1 ProximalPromoter P103035 ProximalPromoter Unique Tile chr11:62220807-62221799 (-) NM_011308 - 33869 62254676 20185 Ncor1 5730405M06Rik|A230020K14Rik|N-CoR|RIP13|Rxrip13|mKIAA1047 nuclear receptor co-repressor 1 MGI:1349717 Mm.271814 11 11 B2 NCOR1 9611 0 catcttggggactatagtggcag tcctagggattgaaccacagttt 7 2 4 1.1.2.3.4.2 BCBC-5A-0 14095004 P103785 Uqcrfs1 ProximalPromoter P103785 ProximalPromoter Unique Tile chr13:30553002-30554002 (-) NM_025710 - 214 30552788 66694 Uqcrfs1 4430402G14Rik|AI875505 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 MGI:1913944 Mm.181933 13 13 A3.3 UQCRFS1 7386 0 taaggacacctgcaatcattcct gatccttcatttagggcaaaacc 7 2 5 1.1.2.3.5.2 BCBC-5A-0 14095023 P106823 Ldhb DistalPromoter P106823 DistalPromoter Unique Tile chr6:142465792-142467989 (-) NM_008492 - 627 142465165 16832 Ldhb AI790582|Ldh-2|Ldh2 lactate dehydrogenase B MGI:96763 Mm.9745 6 6 G2|6 62.0 cM LDHB 3945 NM_145572 - 35623 142430169 232493 Gys2 0 attgccaggcttaattgcttctc aactgcaaggtcccaagaaaaag 7 2 6 1.1.2.3.6.2 BCBC-5A-0 14095042 P107234 Hoxb4 DistalPromoter P107234 DistalPromoter Unique Tile chr11:96131717-96133880 (+) NM_010459 + 476 96134356 15412 Hoxb4 Hox-2.6 homeo box B4 MGI:96185 Mm.3546 11 11 D|11 56.05 cM HOXB4 3214 NM_008268 + 12036 96119681 15413 Hoxb5 0 tggagtgggtcgtggtacttcta gagttctaattgccgctaaagcc 7 2 7 1.1.2.3.7.2 BCBC-5A-0 14095061 P105768 Gdf15 DistalPromoter P105768 DistalPromoter Unique Tile chr8:73562477-73564498 (-) NM_011819 - 1393 73561084 23886 Gdf15 MIC-1|SBF growth differentiation factor 15 MGI:1346047 Mm.31325 8 - GDF15 9518 NM_153074 + 16645 73545832 211228 Lrrc25 0 gggttcttctttcttccaccctt gtcccaactttcctaacccacac 7 2 8 1.1.2.3.8.2 BCBC-5A-0 14095080 P104163 Arg1 DistalPromoter P104163 DistalPromoter Unique Tile chr10:24617609-24619471 (-) NM_007482 - 709 24616900 11846 Arg1 AI|AI256583|Arg-1|PGIF|arginase I arginase 1, liver MGI:88070 Mm.154144 10 10 A4 ARG1 383 0 ctgactgtgagggtaaatcggtg cattcttatgctgttttgcccag 7 2 9 1.1.2.3.9.2 BCBC-5A-0 14095099 P203017 Ttn ProximalPromoter P203017 ProximalPromoter Unique Tile chr2:76783501-76784505 (-) NM_011652;NM_028004; - 115 76783386 22138 Ttn 1100001C23Rik|2310036G12Rik|2310057K23Rik|2310074I15Rik|AV006427|D330041I19Rik|D830007G01Rik|mdm|shru titin MGI:98864 Mm.373672 2 2 D|2 44.0 cM TTN 7273 0 caggagactgaaaaggctcaaaa tttgggagtatcacagaccacct 7 2 10 1.1.2.3.10.2 BCBC-5A-0 14095118 P203186 Csf3r ProximalPromoter P203186 ProximalPromoter Unique Tile chr4:125525931-125527009 (+) NM_007782 + 30 125527039 12986 Csf3r Cd114|Csfgr|G-CSFR|MGC141472|MGC141473 colony stimulating factor 3 receptor (granulocyte) MGI:1339755 Mm.271701 4 4 D2.2|4 57.5 cM CSF3R 1441 NM_025544 + 22222 125549231 66407 Mrps15 0 tgggttctcagtgctcctacttc ctctttctagccccgtcgttaat 7 2 11 1.1.2.3.11.2 BCBC-5A-0 14095137 P204035 Pcdhga11 ProximalPromoter P204035 ProximalPromoter Unique Tile chr18:37880522-37881590 (+) NM_033594 + 156 37881746 93723 Pcdhga11 - protocadherin gamma subfamily A, 11 MGI:1935228 Mm.247203 18 18 B3 PCDHGA11 56105 NM_033579 + 2770 37877752 93704 Pcdhgb7 0 agttctatccagcatgcagaagg accttttccgtggatcctaacat 7 2 12 1.1.2.3.12.2 BCBC-5A-0 14095156 P202656 Slc9a7 ProximalPromoter P202656 ProximalPromoter Unique Tile chrX:19449006-19449986 (-) NM_177353 - 277 19448729 236727 Slc9a7 A530087D17Rik|NHE7 solute carrier family 9 (sodium/hydrogen exchanger), isoform 7 MGI:2444530 Mm.132983 X X A1.3 SLC9A7 84679 0 tggaggagtagcaaaagatcctg gcaagccagttcctgagttgtag 7 2 13 1.1.2.3.13.2 BCBC-5A-0 14095175 P205830 Sfrs2 ProximalPromoter P205830 ProximalPromoter Unique Tile chr11:116669204-116670187 (-) NM_011358 - 32 116669172 20382 Sfrs2 D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10 splicing factor, arginine/serine-rich 2 (SC-35) MGI:98284 Mm.21841 11 11 E2|11 73.0 cM SFRS2 6427 NM_178620 + 83 116670104 69900 2600014M03Rik 2 tttttagactccggggacatttt cgcatttatacccacccttacaa 7 2 14 1.1.2.3.14.2 BCBC-5A-0 14095194 P202987 AA986860 ProximalPromoter P202987 ProximalPromoter Unique Tile chr1:132566548-132567718 (+) NM_177604 + 99 132567817 212439 AA986860 E030025M07 expressed sequence AA986860 MGI:2138143 Mm.268547 1 1 E4 C1orf116 79098 NM_178691 + 21676 132544872 226418 9930028C20Rik 1 tggggttaaaggacaacagctaa gtccccaatctctcatgtcaaag 7 2 15 1.1.2.3.15.2 BCBC-5A-0 14095213 P206274 Syn3 ProximalPromoter P206274 ProximalPromoter Unique Tile chr10:85921603-85922635 (-) NM_013722 - 7035 85928638 27204 Syn3 MGC130403 synapsin III MGI:1351334 Mm.430741 10 10 C2 SYN3 8224 0 gcccagctgtagcactcttttta gctgttaaacaattcatttgggg 7 2 16 1.1.2.3.16.2 BCBC-5A-0 14095232 P200900 Olfr212 ProximalPromoter P200900 ProximalPromoter Unique Tile chr6:116471258-116472261 (+) NM_001011800 + 127 116472134 258019 Olfr212 4931403F16Rik|MOR119-4 olfactory receptor 212 MGI:3030046 Mm.67253 6 6 E3 NM_146912 + 12029 116459229 258914 Olfr211 0 ccggaggagaagaaaaatgactt tgatatgctcgactgaatctgga 7 2 17 1.1.2.3.17.2 BCBC-5A-0 14095251 P210114 BC031748 ProximalPromoter P210114 ProximalPromoter Unique Tile chrX:132394771-132395845 (+) NM_146261 + 147 132395992 245622 BC031748 MGC19245 cDNA sequence BC031748 MGI:2384304 Mm.391313 X X F1 CXorf39 139231 0 aaatcctcatgagagaaagggct aatgtcagtgtcttaagcccagg 7 2 18 1.1.2.3.18.2 BCBC-5A-0 14095270 P209408 Pex11c ProximalPromoter P209408 ProximalPromoter Unique Tile chr8:3454556-3455509 (+) NM_026951 - 13081 3467637 69129 Pex11c 1810022F11Rik|1810049N02Rik|gamma peroxisomal biogenesis factor 11c MGI:1920905 Mm.45279 8 8 A1.1 PEX11G 92960 NM_080461 + 37661 3493170 140482 Zfp358 0 agacccctttctgtcctgatacc acaagaccagaccagaagaccag 7 2 19 1.1.2.3.19.2 BCBC-5A-0 14094929 P100336 ProximalPromoter P100336 ProximalPromoter No Hits Tile 1 aaactgttccactgggtggtg taaatggaacgaagaggccaa 7 3 1 1.1.2.3.1.3 BCBC-5A-0 14094948 P101086 Zyx ProximalPromoter P101086 ProximalPromoter Unique Tile chr6:42278404-42279394 (+) NM_011777 + 81 42279475 22793 Zyx 9530098H06Rik|R75157 zyxin MGI:103072 Mm.282303 6 6 B2.1 ZYX 7791 NM_023580 - 23445 42302839 13835 Epha1 0 tgcccctaaagcatagctcaa caggcctctgatgtcatttcc 7 3 2 1.1.2.3.2.3 BCBC-5A-0 14094967 P102219 Dmbt1 ProximalPromoter P102219 ProximalPromoter Unique Tile chr7:130822334-130823288 (+) NM_007769 + 65 130823223 12945 Dmbt1 CRP|CRP-[a]|CRP-[b]|Crpd|DBMT1|MUCLIN|ebnerin|gp300|hensin deleted in malignant brain tumors 1 MGI:106210 Mm.4138 7 7 F4 DMBT1 1755 0 gccagaaaacagtcaattctgct gacagaatttgaccccacaaaag 7 3 3 1.1.2.3.3.3 BCBC-5A-0 14094986 P103059 Sox17 ProximalPromoter P103059 ProximalPromoter Unique Tile chr1:4486676-4487744 (-) NM_011441 - 182 4486494 20671 Sox17 Sox SRY-box containing gene 17 MGI:107543 Mm.279103 1 1 A1|1 7.0 cM SOX17 64321 0 agtccttacttcgtctggggaac tcacactcaaacagtgcaggatt 7 3 4 1.1.2.3.4.3 BCBC-5A-0 14095005 P103809 ProximalPromoter P103809 ProximalPromoter No Hits Tile 0 ggctggtaattttctcaggctct aggagccactgctgataagacac 7 3 5 1.1.2.3.5.3 BCBC-5A-0 14095024 P106845 Mpp1 DistalPromoter P106845 DistalPromoter Unique Tile chrX:71384677-71386824 (-) NM_008621 - 969 71383708 17524 Mpp1 55kDa|C130070C03Rik membrane protein, palmitoylated MGI:105941 Mm.391267 X X A7.3|X 30.48 cM MPP1 4354 NM_001033786 - 29647 71416471 434800 4930428E23Rik 0 cagaaccttccaaagagcagtca ggaactggaaaggatgaaattgg 7 3 6 1.1.2.3.6.3 BCBC-5A-0 14095043 P107177 Fadd DistalPromoter P107177 DistalPromoter Unique Tile chr7:144392686-144394756 (-) NM_010175 - 860 144391826 14082 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain MGI:109324 Mm.5126 7 7 F5|7 70.0 cM FADD 8772 2 ttaatcccagcattccagagaca actaactgccctgctttgagctt 7 3 7 1.1.2.3.7.3 BCBC-5A-0 14095062 P105790 Plod3 DistalPromoter P105790 DistalPromoter Unique Tile chr5:137268943-137270956 (+) NM_011962 + 689 137271645 26433 Plod3 AI414586|LH3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 MGI:1347008 Mm.251003 5 5 G2|5 80.0 cM PLOD3 8985 NM_027318 - 521 137271477 70103 Znhit1 1 gaactccaattgaagaccaggct ctacacaaacacgtgcacacaca 7 3 8 1.1.2.3.8.3 BCBC-5A-0 14095081 P104187 Car3 DistalPromoter P104187 DistalPromoter Unique Tile chr3:14837109-14838910 (+) NM_007606 + 1371 14840281 12350 Car3 BB219044|Car-3 carbonic anhydrase 3 MGI:88270 Mm.300 3 3 A2|3 11.7 cM CA3 761 NM_009801 + 24539 14863449 12349 Car2 0 cttgatggatctgggaggatttc cagctaggtatgtggaatggctg 7 3 9 1.1.2.3.9.3 BCBC-5A-0 14095100 P203041 Rft1 ProximalPromoter P203041 ProximalPromoter Unique Tile chr14:29482208-29483265 (+) NM_177815 + 118 29483383 328370 Rft1 D930025H04 RFT1 homolog (S. cerevisiae) MGI:3607791 Mm.259657 14 14 A3 RFT1 91869 NM_011103 - 27027 29455181 18753 Prkcd 0 gaaggccaaagagctttgaaaat cttgattttcttggggtgtcttg 7 3 10 1.1.2.3.10.3 BCBC-5A-0 14095119 P200097 Ube1l ProximalPromoter P200097 ProximalPromoter Unique Tile chr9:107832713-107833699 (+) NM_023738 + 32 107833667 74153 Ube1l 1300004C08Rik ubiquitin-activating enzyme E1-like MGI:1349462 Mm.277125 9 9 F2|9 60.0 cM UBE1L 7318 NM_177090 + 7459 107841158 320169 D330022A01Rik 0 cagtgattgggtaggtcataggc gctgctggttacagctctctttc 7 3 11 1.1.2.3.11.3 BCBC-5A-0 14095138 P204059 Dok5 ProximalPromoter P204059 ProximalPromoter Unique Tile chr2:170421650-170422749 (+) NM_029761 + 262 170423011 76829 Dok5 2700055C10Rik docking protein 5 MGI:1924079 Mm.41633 2 2 H3|2 99.0 cM DOK5 55816 0 cagaaacacgaagacagagcaga ccccatcattttcacataagagc 7 3 12 1.1.2.3.12.3 BCBC-5A-0 14095157 P202680 1110057K04Rik ProximalPromoter P202680 ProximalPromoter Unique Tile chr12:8232999-8233979 (+) NM_172401 + 153 8234132 68832 1110057K04Rik - RIKEN cDNA 1110057K04 gene MGI:1916082 Mm.25608 12 12 A1.1 FLJ21820 60526 0 cgcccttgatatgtcagtagtcc ataccacctgaattttacccgct 7 3 13 1.1.2.3.13.3 BCBC-5A-0 14095176 P205854 Slc34a2 ProximalPromoter P205854 ProximalPromoter Unique Tile chr5:53336687-53337750 (+) NM_011402 + 121 53337629 20531 Slc34a2 AA536683|D5Ertd227e|NaPi-2b|Npt2b solute carrier family 34 (sodium phosphate), member 2 MGI:1342284 Mm.284891 5 5 C1|5 31.0 cM SLC34A2 10568 1 actgagaaaaatgaggaggggac agtcaagtcccttaggggtgtct 7 3 14 1.1.2.3.14.3 BCBC-5A-0 14095195 P202921 Actc1 ProximalPromoter P202921 ProximalPromoter Unique Tile chr2:113725431-113726527 (-) NM_009608 - 18810 113744241 11464 Actc1 Actc-1 actin, alpha, cardiac MGI:87905 Mm.686 2 2 E4|2 64.0 cM ACTC 70 NM_010290 - 20371 113705060 14617 Gja9 0 taacccactctgggcagtatcat gactacaaccaccacatcatgga 7 3 15 1.1.2.3.15.3 BCBC-5A-0 14095214 P206298 Ihpk1 ProximalPromoter P206298 ProximalPromoter Unique Tile chr9:107859477-107860520 (+) NM_013785 + 228 107860748 27399 Ihpk1 1200016D08Rik|AU022776|InsP6|Itpk6 inositol hexaphosphate kinase 1 MGI:1351633 Mm.276155 9 9 F2 IHPK1 9807 NM_026597 - 15497 107843980 68176 6230427J02Rik 0 tgtatactgccatgctctgccta attctcaggtttgctagcagtgg 7 3 16 1.1.2.3.16.3 BCBC-5A-0 14095233 P200924 Zfy1 ProximalPromoter P200924 ProximalPromoter Unique Tile chrY:103932-104871 (+) NM_009570 - 29920 133852 22767 Zfy1 Zfy-1 zinc finger protein 1, Y linked MGI:99212 Mm.4324 Y Y A1 1 cacttagaatggggcagaagaga aatcaaattcactcttgcttgcg 7 3 17 1.1.2.3.17.3 BCBC-5A-0 14095252 P210139 Ubqln1 ProximalPromoter P210139 ProximalPromoter Unique Tile chr13:58225445-58226366 (-) NM_026842;NM_152234; - 186 58225259 56085 Ubqln1 1110046H03Rik|1810030E05Rik|AU019746|C77538|D13Ertd372e|DA41|Dsk2|Plic-1|XDRP1 ubiquilin 1 MGI:1860276 Mm.182053 13 13 B1 UBQLN1 29979 0 cttcctgtgattgaacaatgctg agaacttaacccacttcgcgtct 7 3 18 1.1.2.3.18.3 BCBC-5A-0 14095271 P207391 1200011M11Rik ProximalPromoter P207391 ProximalPromoter Unique Tile chr11:86903111-86904095 (-) NM_024262 - 139 86902972 74133 1200011M11Rik - RIKEN cDNA 1200011M11 gene MGI:1921383 Mm.23257 11 11 C C17orf71 55181 NM_025638 - 12868 86890243 66569 Gdpd1 2 tagctctggctgtcctgtagacc gcaaggtcttagcgctacgttta 7 3 19 1.1.2.3.19.3 BCBC-5A-0 14094930 P100360 Neo1 ProximalPromoter P100360 ProximalPromoter Unique Tile chr9:58834913-58835827 (-) NM_008684 - 351 58834562 18007 Neo1 2610028H22Rik|AI327052|D930014N22Rik neogenin MGI:1097159 Mm.42249 9 9 B NEO1 4756 1 ggaagggagggctcctaattt ggagagatttcccctcacctc 7 4 1 1.1.2.3.1.4 BCBC-5A-0 14094949 P101110 Pcbp1 ProximalPromoter P101110 ProximalPromoter Unique Tile chr6:86491508-86492607 (-) NM_011865 - 164 86491672 23983 Pcbp1 WBP17|[a]CP-1|alphaCP-1 poly(rC) binding protein 1 MGI:1345635 Mm.274146 6 6 D1 PCBP1 5093 1 cgggaactatcgtgggacata gagagtcacgttgagtccgct 7 4 2 1.1.2.3.2.4 BCBC-5A-0 14094968 P102243 Diap1 ProximalPromoter P102243 ProximalPromoter Unique Tile chr18:38061436-38062505 (-) NM_007858 - 39 38061397 13367 Diap1 D18Wsu154e|Dia1|Drf1|KIAA4062|mKIAA4062|p140mDia diaphanous homolog 1 (Drosophila) MGI:1194490 Mm.195916 18 18 B3|18 16.0 cM DIAPH1 1729 NM_010411 - 18457 38080962 15183 Hdac3 0 tggaaggttggaaacaggagata tcatgaatatacaacggtgacgc 7 4 3 1.1.2.3.3.4 BCBC-5A-0 14094987 P102993 Pip5k3 ProximalPromoter P102993 ProximalPromoter Unique Tile chr1:65123128-65124150 (+) NM_011086 + 3173 65120977 18711 Pip5k3 5230400C17Rik|Pikfyve|Pip5k|Pipk5k3|p235 phosphatidylinositol-3-phosphate/phosphatidylinositol 5-kinase, type III MGI:1335106 Mm.38370; Mm.395175; Mm.38370; Mm.395175; Mm.38370; Mm.395175; Mm.38370; Mm.395175; Mm.38370; Mm.395175; Mm.38370; Mm.395175; Mm.38370; Mm.395175; Mm.38370; Mm.395175; Mm.38370; Mm.395175; Mm.38370; Mm.395175; Mm.38370; Mm.395175 1 1 C2 PIP5K3 200576 NM_010497 - 9738 65113390 15926 Idh1 2 atgaggaacaagccagtaagcag gcaggacatgtctatgcaatctg 7 4 4 1.1.2.3.4.4 BCBC-5A-0 14095006 P103833 Nt5c3 ProximalPromoter P103833 ProximalPromoter Unique Tile chr6:56853724-56854626 (-) NM_026004 - 317 56853407 107569 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III MGI:1927186 Mm.158936 6 6 B3 NT5C3 51251 NM_134176 + 31464 56886090 171194 V1rc21 0 atcgctgagctcacacctttatc tagtccacagtaagatcgcacca 7 4 5 1.1.2.3.5.4 BCBC-5A-0 14095025 P106866 Riok2 DistalPromoter P106866 DistalPromoter Unique Tile chr17:17052117-17054041 (-) NM_025934 + 25152 17079193 67045 Riok2 2010110K24Rik RIO kinase 2 (yeast) MGI:1914295 Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633; Mm.218423; Mm.395633 17 17 A3.1 RIOK2 55781 0 gtgaaattgctccacagctcact gcgttttgcattttcttcaactg 7 4 6 1.1.2.3.6.4 BCBC-5A-0 14095044 P107199 Gdnf DistalPromoter P107199 DistalPromoter Unique Tile chr15:7755259-7757204 (+) NM_010275 + 1021 7758225 14573 Gdnf AI385739 glial cell line derived neurotrophic factor MGI:107430 Mm.4679 15 15 A1 GDNF 2668 0 gctaagactccaagtgtctgcca agtggcttttctgattcgctttc 7 4 7 1.1.2.3.7.4 BCBC-5A-0 14095063 P105890 Zfp326 DistalPromoter P105890 DistalPromoter Unique Tile chr5:106114191-106115995 (+) NM_018759 + 892 106116887 54367 Zfp326 5730470H14Rik|ZAN75 zinc finger protein 326 MGI:1927246 Mm.248876 5 5 E5 ZNF326 284695 NM_177251 + 49379 106064812 320751 D830014E11Rik 0 gctttaaatgaagagggctcgaa gtcctcctgctcatctcttcctc 7 4 8 1.1.2.3.8.4 BCBC-5A-0 14095082 P104211 Cfi DistalPromoter P104211 DistalPromoter Unique Tile chr3:129825216-129827345 (+) NM_007686 + 1415 129828760 12630 Cfi - complement component factor i MGI:105937 Mm.117180 3 3 G3|3 66.6 cM CFI 3426 NM_026578 - 1873 129823343 68147 Nola1 0 tgaacctatggggctatggagat tggtgaaaatgtggtacctttgg 7 4 9 1.1.2.3.9.4 BCBC-5A-0 14095101 P203065 5031434C07Rik ProximalPromoter P203065 ProximalPromoter Unique Tile chr6:112256272-112257179 (-) NM_177012 - 203 112256069 319831 5031434C07Rik - RIKEN cDNA 5031434C07 gene MGI:2442810 Mm.136719 6 6 E3 NM_144799 + 16678 112239594 30937 Lmcd1 0 ctagctacctaggtccagtgcca tgatttctccctgatctccaaaa 7 4 10 1.1.2.3.10.4 BCBC-5A-0 14095120 P200121 Ceacam12 ProximalPromoter P200121 ProximalPromoter Unique Tile chr7:17223507-17224546 (+) NM_026087 + 34 17224512 67315 Ceacam12 1600031J20Rik|MGC117634 CEA-related cell adhesion molecule 12 MGI:1914565 Mm.46089 7 7 A2 0 gagaatcagggaactgggaaagt agtgaaaaggttcagctcctgtg 7 4 11 1.1.2.3.11.4 BCBC-5A-0 14095139 P203992 Prosc ProximalPromoter P203992 ProximalPromoter Unique Tile chr8:28507427-28508329 (+) NM_001039077;NM_001039078;NM_054057; + 141 28508470 114863 Prosc 1700024N20Rik|2200002F22Rik proline synthetase co-transcribed MGI:1891207 Mm.277501 8 8 A3 PROSC 11212 NM_153592 + 17633 28489794 244373 Spfh2 0 ctccttccaccatatgactttgg taactttcattcatccgttccgt 7 4 12 1.1.2.3.12.4 BCBC-5A-0 14095158 P202704 0710005M24Rik ProximalPromoter P202704 ProximalPromoter Unique Tile chr3:13453101-13454040 (+) NM_178631 + 173 13454213 76897 0710005M24Rik - RIKEN cDNA 0710005M24 gene MGI:1924147 Mm.121014; Mm.383516; Mm.422625; Mm.121014; Mm.383516; Mm.422625; Mm.121014; Mm.383516; Mm.422625; Mm.121014; Mm.383516; Mm.422625; Mm.121014; Mm.383516; Mm.422625; Mm.121014; Mm.383516; Mm.422625; Mm.121014; Mm.383516; Mm.422625; Mm.121014; Mm.383516; Mm.422625; Mm.121014; Mm.383516; Mm.422625; Mm.121014; Mm.383516; Mm.422625 3 3 A1 LOC138046 138046 0 attaattcattgcagagcccaga caaagaagaacagctcagggatg 7 4 13 1.1.2.3.13.4 BCBC-5A-0 14095177 P205878 Sprr2a ProximalPromoter P205878 ProximalPromoter Duplication Tile chr3:92300315-92301301 (+) NM_011468 + 36 92301337 20755 Sprr2a MGC117544 small proline-rich protein 2A MGI:1330350 Mm.6853 3 3 F1|3 45.2 cM SPRR2A 6700 0 gatgaagggggaaactctatgct tttttataggattgcctgcctca 7 4 14 1.1.2.3.14.4 BCBC-5A-0 14095196 P202945 Abcc8 ProximalPromoter P202945 ProximalPromoter Unique Tile chr7:46018772-46019804 (-) NM_011510 - 29303 46048075 20927 Abcc8 D930031B21Rik|SUR1|Sur ATP-binding cassette, sub-family C (CFTR/MRP), member 8 MGI:1352629 Mm.259076 7 7 B3|7 41.0 cM ABCC8 6833 1 ttgtgaggatctgatggtagggt agatggaggtgtagacagcgaag 7 4 15 1.1.2.3.15.4 BCBC-5A-0 14095215 P200780 Ing5 ProximalPromoter P200780 ProximalPromoter Unique Tile chr1:95633559-95634459 (+) NM_025454 + 71 95634388 66262 Ing5 1700001C14Rik|1700027H23Rik|1810018M11Rik|AI225768 inhibitor of growth family, member 5 MGI:1922816 Mm.64065 1 1 D ING5 84289 NM_023136 - 1248 95632311 21915 Dtymk 1 tgataaatgcagccagtctgaaa gccagagtgcttactgtccagat 7 4 16 1.1.2.3.16.4 BCBC-5A-0 14095234 P200948 Tubd1 ProximalPromoter P200948 ProximalPromoter Unique Tile chr11:86360149-86361231 (+) NM_019756 + 29 86361202 56427 Tubd1 4930550G19Rik|Tubd tubulin, delta 1 MGI:1891826 Mm.383207 11 11 C TUBD1 51174 NM_028259 - 262 86360969 72508 Rps6kb1 1 cttgctcccgaaataaaactcct aaggctaatcacgcatgttcaat 7 4 17 1.1.2.3.17.4 BCBC-5A-0 14095253 P210163 Sirt7 ProximalPromoter P210163 ProximalPromoter Unique Tile chr11:120441316-120442315 (-) NM_153056 - 256 120441060 209011 Sirt7 MGC31235|MGC37560 sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae) MGI:2385849 Mm.292957 11 11 E2 SIRT7 51547 NM_010756 - 7173 120449488 17134 Mafg 0 cagggtttgcagctttgataaac cccctcctggacaataatttagc 7 4 18 1.1.2.3.18.4 BCBC-5A-0 14095272 P207415 Grpel1 ProximalPromoter P207415 ProximalPromoter Unique Tile chr5:36781141-36782211 (+) NM_024478 + 66 36782277 17713 Grpel1 AA408748|MGC8152|mt-GrpE#1|mt-Grpel1 GrpE-like 1, mitochondrial MGI:1334417 Mm.21535 5 5 B3 GRPEL1 80273 NM_025725 + 19471 36801682 66717 Ccdc96 2 gttgtggctttctttgttctgct gctgctttttagctaatccgtga 7 4 19 1.1.2.3.19.4 BCBC-5A-0 14094931 P100294 Itga6 ProximalPromoter P100294 ProximalPromoter Unique Tile chr2:71586496-71587428 (+) NM_008397 + 350 71587778 16403 Itga6 5033401O05Rik|AI115430|Cd49f integrin alpha 6 MGI:96605 Mm.225096 2 2 C2|2 38.0 cM ITGA6 3655 0 catggtctctgctccaggttc aaacgtcgaaaacgttgctgt 7 5 1 1.1.2.3.1.5 BCBC-5A-0 14094950 P101134 Psmb2 ProximalPromoter P101134 ProximalPromoter Unique Tile chr4:126178429-126179523 (+) NM_011970 + 446 126179969 26445 Psmb2 AU045357|AW108089|C7-I|D4Wsu33e proteasome (prosome, macropain) subunit, beta type 2 MGI:1347045 Mm.22233 4 4 D2.2|4 57.6 cM PSMB2 5690 0 tagctggaccttatggaggca ggtggttccctcttgaaatcc 7 5 2 1.1.2.3.2.5 BCBC-5A-0 14094969 P102267 Ezh2 ProximalPromoter P102267 ProximalPromoter Unique Tile chr6:47524833-47525904 (-) NM_007971 - 227 47524606 14056 Ezh2 Enx-1|Enx1h|KIAA4065|MGC90723|mKIAA4065 enhancer of zeste homolog 2 (Drosophila) MGI:107940 Mm.246688 6 6 B|6 19.2 cM EZH2 2146 0 ctgaaggaagccagaagatgtgt agtcgctgtctttgttcttttgc 7 5 3 1.1.2.3.3.5 BCBC-5A-0 14094988 P103017 ProximalPromoter P103017 ProximalPromoter No Hits Tile 0 acaaaccccattacagatggttg gttgcacagtgaatgaggacaag 7 5 4 1.1.2.3.4.5 BCBC-5A-0 14095007 P000577 Blank P000577 Buffer Control Negative Blank 7 5 5 1.1.2.3.5.5 BCBC-5A-0 14095026 P106888 Usp29 DistalPromoter P106888 DistalPromoter Unique Tile chr7:6317042-6319111 (-) NM_021323 + 15557 6334668 57775 Usp29 Ocat ubiquitin specific peptidase 29 MGI:1888998 Mm.394138; Mm.40752; Mm.394138; Mm.40752; Mm.394138; Mm.40752; Mm.394138; Mm.40752; Mm.394138; Mm.40752; Mm.394138; Mm.40752; Mm.394138; Mm.40752; Mm.394138; Mm.40752; Mm.394138; Mm.40752; Mm.394138; Mm.40752; Mm.394138; Mm.40752 7 7 A1|7 6.5 cM USP29 57663 NM_008817 - 15382 6334493 18616 Peg3 0 gtgagcataggcaaaggctttct ctacactctgaggcagatcccaa 7 5 6 1.1.2.3.6.5 BCBC-5A-0 14095045 P107221 Hesx1 DistalPromoter P107221 DistalPromoter Unique Tile chr14:25823656-25826403 (+) NM_010420 + 842 25827245 15209 Hesx1 HES-1|Rpx homeo box gene expressed in ES cells MGI:96071 Mm.4802 14 14 A3-B HESX1 8820 NM_145221 - 26209 25797447 72993 2900057D21Rik 2 aacaggctccatcttttggctac tcagcctaagccctagaatggac 7 5 7 1.1.2.3.7.5 BCBC-5A-0 14095064 P105912 Tusc4 DistalPromoter P105912 DistalPromoter Unique Tile chr9:107397297-107399472 (+) NM_018879 + 856 107400328 56032 Tusc4 2810446G01Rik|G21|NPR2L|NPRL2 tumor suppressor candidate 4 MGI:1914482 Mm.11337 9 9 F1 TUSC4 10641 NM_019720 - 494 107399966 56368 Cyb561d2 0 ccttgtctcagaaacagaaggca ttgaacgtatttaacgtcgtggg 7 5 8 1.1.2.3.8.5 BCBC-5A-0 14095083 P104145 Adcy6 DistalPromoter P104145 DistalPromoter Unique Tile chr15:98434250-98436269 (-) NM_007405 - 1417 98435667 11512 Adcy6 mKIAA0422 adenylate cyclase 6 MGI:87917 Mm.157091 15 15 F ADCY6 112 NM_007581 + 26900 98463169 12297 Cacnb3 0 tggatatgatttggttgtgggag ctcctttaggtcacagcccaagt 7 5 9 1.1.2.3.9.5 BCBC-5A-0 14095102 P203089 Lhfpl2 ProximalPromoter P203089 ProximalPromoter Unique Tile chr13:95157393-95158294 (+) NM_172589 + 254 95158548 218454 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206 lipoma HMGIC fusion partner-like 2 MGI:2145236 Mm.316553 13 13 D1 LHFPL2 10184 1 aggtaccctttgcatgtgaagaa ggttctctcctcacgctgtcc 7 5 10 1.1.2.3.10.5 BCBC-5A-0 14095121 P200147 Nudcd2 ProximalPromoter P200147 ProximalPromoter Unique Tile chr11:40576165-40577152 (+) NM_026023 + 62 40577090 52653 Nudcd2 2700047N05Rik|D11Ertd603e NudC domain containing 2 MGI:1277103 Mm.276504 11 11 A5|11 23.0 cM NUDCD2 134492 NM_013552 - 307 40576845 15366 Hmmr 0 caaaggtcatgagttcaaatccc gagaaaagtgcctgcgatcttta 7 5 11 1.1.2.3.11.5 BCBC-5A-0 14095140 P204017 Asb7 ProximalPromoter P204017 ProximalPromoter Unique Tile chr7:66558194-66559180 (-) NM_080443;NM_178236; - 10 66558184 117589 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing protein 7 MGI:2152835 Mm.34785 7 7 C ASB7 140460 NM_152815 + 27873 66587053 72635 Lins2 0 atgtgcgtctccatgactacaga aactcttcctgaagctcagggtt 7 5 12 1.1.2.3.12.5 BCBC-5A-0 14095159 P204566 Il1r1 ProximalPromoter P204566 ProximalPromoter Unique Tile chr1:40168362-40169427 (+) NM_008362 + 198 40169625 16177 Il1r1 CD121a|CD121b|Il1r-1|MGC129154 interleukin 1 receptor, type I MGI:96545 Mm.896 1 1 B|1 19.5 cM IL1R1 3554 0 tcctgtttccaaaccaatcatct caggctttctccccttgtctaat 7 5 13 1.1.2.3.13.5 BCBC-5A-0 14095178 P205902 Tacc3 ProximalPromoter P205902 ProximalPromoter Unique Tile chr5:33974162-33975217 (+) NM_001040435;NM_011524; + 250 33975467 21335 Tacc3 Aint|C86661 transforming, acidic coiled-coil containing protein 3 MGI:1341163 Mm.379024 5 5 B2 TACC3 10460 NM_026698 - 482 33974735 68366 Tmem129 0 tgaaatcaacaggagctctttcc ttggtagccagtgactgtgagag 7 5 14 1.1.2.3.14.5 BCBC-5A-0 14095197 P202969 Fbln5 ProximalPromoter P202969 ProximalPromoter Unique Tile chr12:102220260-102221519 (-) NM_011812 - 155 102220105 23876 Fbln5 A55|DANCE|EVEC fibulin 5 MGI:1346091 Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205; Mm.288381; Mm.400205 12 12 F1 FBLN5 10516 0 tctctccagcccctacaatcata agcacgaacttgaactcacacc 7 5 15 1.1.2.3.15.5 BCBC-5A-0 14095216 P200804 Extl2 ProximalPromoter P200804 ProximalPromoter Unique Tile chr3:115998532-115999561 (+) NM_021388 + 73 115999488 58193 Extl2 3000001D04Rik|AW146439 exotoses (multiple)-like 2 MGI:1889574 Mm.41739 3 3 G1 EXTL2 2135 NM_023214 - 178 115999383 66500 Slc30a7 1 ggcatagctaaggcaagctgtta tcgtgagttcaggagataggacc 7 5 16 1.1.2.3.16.5 BCBC-5A-0 14095235 P200882 2810032G03Rik ProximalPromoter P200882 ProximalPromoter Unique Tile chr12:5436465-5437397 (+) NM_028318 + 251 5437648 72669 2810032G03Rik AI461720 RIKEN cDNA 2810032G03 gene MGI:1919919 Mm.10434 12 12 A1.1 0 agttttgtggcaaatggttgtct ctactgttggagtatggcttggg 7 5 17 1.1.2.3.17.5 BCBC-5A-0 14095254 P210187 Cldn19 ProximalPromoter P210187 ProximalPromoter Unique Tile chr4:118752515-118753442 (+) NM_153105;NM_001038590; + 2 118753440 242653 Cldn19 MGC141195 claudin 19 MGI:3033992 Mm.130701 4 4 D2.1 CLDN19 149461 NM_019782;NM_001042411;NM_019783; + 20755 118731760 56401 Lepre1 2 cttcttcctccaagttcaggaca gtggtcatggtaagaggaacagc 7 5 18 1.1.2.3.18.5 BCBC-5A-0 14095273 P207440 Gpr97 ProximalPromoter P207440 ProximalPromoter Unique Tile chr8:97932486-97933566 (+) NM_173036 + 26706 97906860 54672 Gpr97 A030001G24Rik|AW214383|Pb1|Pb99 G protein-coupled receptor 97 MGI:1859670 Mm.27995 8 8 D1 GPR97 222487 NM_028805 + 36763 97970329 74187 Katnb1 2 cctaggtttagttcccaacaccc agaggatgatgaaccagcagaag 7 5 19 1.1.2.3.19.5 BCBC-5A-0 14094932 P100318 Lrp1 ProximalPromoter P100318 ProximalPromoter Unique Tile chr10:127024617-127025637 (-) NM_008512 - 542 127024075 16971 Lrp1 A2mr|AI316852|CD91|Lrp low density lipoprotein receptor-related protein 1 MGI:96828 Mm.271854 10 10 B2-D1 LRP1 4035 NM_009284 + 20482 127046119 20852 Stat6 2 ggaacaggaggaggaggaaga gggaaaggctgagctttgatt 7 6 1 1.1.2.3.1.6 BCBC-5A-0 14094951 P101440 Atf7ip ProximalPromoter P101440 ProximalPromoter Unique Tile chr6:136481531-136482452 (+) NM_019426 + 594 136483046 54343 Atf7ip 2610204M12Rik|AM activating transcription factor 7 interacting protein MGI:1858965 Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788; Mm.173271; Mm.361788 6 6 G1 ATF7IP 55729 0 agaccaggctggcttaacctc atcggcctcaaactctgtcaa 7 6 2 1.1.2.3.2.6 BCBC-5A-0 14094970 P102291 Fzd7 ProximalPromoter P102291 ProximalPromoter Unique Tile chr1:59425881-59426906 (+) NM_008057 + 182 59426724 14369 Fzd7 Fz7 frizzled homolog 7 (Drosophila) MGI:108570 Mm.297906 1 1 C1.3|1 30.1 cM FZD7 8324 NM_001013771 + 33903 59460809 381260 Gm973 1 cagagctgccttggagttaaaaa ctcgttctcgctttgagtctgat 7 6 3 1.1.2.3.3.6 BCBC-5A-0 14094989 P103041 Ccl12 ProximalPromoter P103041 ProximalPromoter Unique Tile chr11:81916687-81917701 (+) NM_011331 + 371 81918072 20293 Ccl12 MCP-5|Scya12 chemokine (C-C motif) ligand 12 MGI:108224 Mm.867 11 11 C|11 47.0 cM NM_021443 + 13685 81931386 20307 Ccl8 0 cagtgaagtgccttggaagctat gagggtgtcaggctaagttttca 7 6 4 1.1.2.3.4.6 BCBC-5A-0 14095008 P000601 Blank P000601 Buffer Control Negative Blank 7 6 5 1.1.2.3.5.6 BCBC-5A-0 14095027 P106832 Ly6e DistalPromoter P106832 DistalPromoter Unique Tile chr15:74781924-74784104 (+) NM_008529 + 1179 74782925 17069 Ly6e 9804|Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E MGI:106651 Mm.788 15 15 D3|15 41.7 cM LY6E 4061 NM_020498 - 26503 74810607 57248 Ly6i 0 ggaaggagaaggaacaaacagga gcatagggtagaggagaggacca 7 6 6 1.1.2.3.6.6 BCBC-5A-0 14095046 P105730 Hoxd3 DistalPromoter P105730 DistalPromoter Unique Tile chr2:74541937-74544119 (+) NM_010468 + 647 74544766 15434 Hoxd3 Hox-4.1|Hox-5.5 homeo box D3 MGI:96207 Mm.430708 2 2 C2|2 45.0 cM HOXD3 3232 NM_207266 - 7226 74551345 399588 6720416L17Rik 0 gcctccaaattgagttgggtaac gtttccagagcttccttccaaaa 7 6 7 1.1.2.3.7.6 BCBC-5A-0 14095065 P105933 Slc2a8 DistalPromoter P105933 DistalPromoter Unique Tile chr2:32805369-32807497 (-) NM_019488 - 1304 32804065 56017 Slc2a8 D2Ertd44e|GLUT8|GlutX1 solute carrier family 2, (facilitated glucose transporter), member 8 MGI:1860103 Mm.305754 2 2 B|2 24.0 cM SLC2A8 29988 NM_009076 + 21627 32783742 269261 Rpl12 0 gatcctggtttaattcccagcac cccgtctgtacagtggttttacg 7 6 8 1.1.2.3.8.6 BCBC-5A-0 14095084 P104169 Atp5k DistalPromoter P104169 DistalPromoter Unique Tile chr5:108676182-108678097 (-) NM_007507 - 1502 108674680 11958 Atp5k 2610008D24Rik|Lfm1|MGC107302 ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit e MGI:106636 Mm.136093 5 5 F|5 56.0 cM ATP5I 521 NM_172883 - 11081 108689178 243197 Mfsd7 0 gtaaatgaactccaaggatgggc taaacttcctcacccctcatggt 7 6 9 1.1.2.3.9.6 BCBC-5A-0 14095103 P205926 Timp3 ProximalPromoter P205926 ProximalPromoter Unique Tile chr10:85729548-85730619 (+) NM_011595 + 231 85730388 21859 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 MGI:98754 Mm.4871 10 10 C1-D1|10 47.0 cM TIMP3 7078 0 ggcctttgtgattgatgttcttc ctcttttcttcaaagttgccgag 7 6 10 1.1.2.3.10.6 BCBC-5A-0 14095122 P200171 ProximalPromoter P200171 ProximalPromoter Unique Tile chr14:51662748-51663664 (-) 0 gctgaagcaagaagatgtggatt tctcagcaggtagcagtgtcttg 7 6 11 1.1.2.3.11.6 BCBC-5A-0 14095141 P204041 BC048403 ProximalPromoter P204041 ProximalPromoter Unique Tile chr10:121142151-121143114 (+) NM_173022 + 118 121142996 270802 BC048403 E030027L10 cDNA sequence BC048403 MGI:2670984 Mm.209172 10 10 D2 FLJ32549 144577 0 acattagccctttgtctggcata tacccaggtgagagaagaacgtc 7 6 12 1.1.2.3.12.6 BCBC-5A-0 14095160 P204590 Ivl ProximalPromoter P204590 ProximalPromoter Unique Tile chr3:92658981-92659935 (-) NM_008412 - 137 92659118 16447 Ivl - involucrin MGI:96626 Mm.207365 3 3 F1|3 45.2 cM IVL 3713 NM_008574 - 14442 92674377 17235 Smcp 0 tgacaatggacaatttggttctg ctgaatctagccccagagcagta 7 6 13 1.1.2.3.13.6 BCBC-5A-0 14095179 P205836 Sorbs3 ProximalPromoter P205836 ProximalPromoter Unique Tile chr14:68946949-68947991 (-) NM_011366 - 4232 68942717 20410 Sorbs3 SH3P3|Sh3d4|vinexin-g sorbin and SH3 domain containing 3 MGI:700013 Mm.5068 14 14 D2|14 34.5 cM SORBS3 10174 NM_145978 - 34197 68912752 213019 Pdlim2 0 cccttagttccttttctccgtgt ggtgttatttagcacgtcttgcc 7 6 14 1.1.2.3.14.6 BCBC-5A-0 14095198 P202993 D730040F13Rik ProximalPromoter P202993 ProximalPromoter Unique Tile chr4:57041583-57042507 (-) NM_175518 - 105 57041478 242474 D730040F13Rik - RIKEN cDNA D730040F13 gene MGI:2445107 Mm.296632 4 4 B3 0 attagcagggatgggaggaaata cgccagaacctaaggaaactaca 7 6 15 1.1.2.3.15.6 BCBC-5A-0 14095217 P200828 1810031K17Rik ProximalPromoter P200828 ProximalPromoter Unique Tile chr1:75025564-75026541 (-) NM_026977 - 0 75025564 69171 1810031K17Rik AU043960 RIKEN cDNA 1810031K17 gene MGI:1916421 Mm.28193 1 1 C3 C2orf24 27013 NM_170755 + 432 75025996 227298 BC038286 1 catcgaaaatcacagaaagaccc ggtgaagctgctttgaagtcatt 7 6 16 1.1.2.3.16.6 BCBC-5A-0 14095236 P200906 Atad2 ProximalPromoter P200906 ProximalPromoter Unique Tile chr15:57949558-57950597 (-) NM_027435 - 15607 57965165 70472 Atad2 2610509G12Rik|MGC38189 ATPase family, AAA domain containing 2 MGI:1917722 Mm.221758; Mm.398814; Mm.221758; Mm.398814; Mm.221758; Mm.398814; Mm.221758; Mm.398814; Mm.221758; Mm.398814; Mm.221758; Mm.398814; Mm.221758; Mm.398814; Mm.221758; Mm.398814; Mm.221758; Mm.398814; Mm.221758; Mm.398814; Mm.221758; Mm.398814 15 15 D2 ATAD2 29028 NM_029734 + 20921 57971518 76773 2410187C16Rik 0 atcccgttgtagcatatggaatg gagacaccgtcttttggagctaa 7 6 17 1.1.2.3.17.6 BCBC-5A-0 14095255 P207100 Zfp191 ProximalPromoter P207100 ProximalPromoter Unique Tile chr18:24163962-24165013 (-) NM_021559 - 181 24163781 59057 Zfp191 3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Znf191|Znp191 zinc finger protein 191 MGI:1929704 Mm.249419 18 18 B1 ZNF24 7572 NM_011755 + 31319 24132643 22694 Zfp35 0 gctggaacgttgagtcttgctat actgttgctctctgttccactcc 7 6 18 1.1.2.3.18.6 BCBC-5A-0 14095274 P207464 Glo1 ProximalPromoter P207464 ProximalPromoter Unique Tile chr17:30339759-30340768 (-) NM_025374 - 134 30339625 109801 Glo1 0610009E22Rik|1110008E19Rik|2510049H23Rik|AW550643|GLY1|Glo-1|Glo-1r|Glo-1s|Glo1-r|Glo1-s|Qglo glyoxalase 1 MGI:95742 Mm.261984; Mm.392778; Mm.261984; Mm.392778; Mm.261984; Mm.392778; Mm.261984; Mm.392778; Mm.261984; Mm.392778; Mm.261984; Mm.392778; Mm.261984; Mm.392778; Mm.261984; Mm.392778; Mm.261984; Mm.392778; Mm.261984; Mm.392778; Mm.261984; Mm.392778; Mm.261984; Mm.392778 17 17 A3.3|17 16.0 cM GLO1 2739 NM_013811 + 13234 30354002 13417 Dnahc8 2 gttctctgttttgcaatctgcct atggcgagactacattttccaga 7 6 19 1.1.2.3.19.6 BCBC-5A-0 14094933 P100342 Mdh2 ProximalPromoter P100342 ProximalPromoter Unique Tile chr5:136062293-136063203 (+) NM_008617 + 72 136063275 17448 Mdh2 MDH|Mdh-2|Mor-1|Mor1 malate dehydrogenase 2, NAD (mitochondrial) MGI:97050 Mm.297096 5 5 G2|5 78.0 cM MDH2 4191 NM_029659 - 285 136062918 76571 Styxl1 1 agctctgcaagagcagcaagt ccgtgtggttccttgtctagc 7 7 1 1.1.2.3.1.7 BCBC-5A-0 14094952 P101464 Ube2j1 ProximalPromoter P101464 ProximalPromoter Unique Tile chr4:33358417-33359451 (+) NM_019586 + 586 33360037 56228 Ube2j1 0710008M05Rik|1110030I22Rik|Ncube|Ncube1|Ubc6p ubiquitin-conjugating enzyme E2, J1 MGI:1926245 Mm.259095 4 4 A5 UBE2J1 51465 NM_008076 + 32273 33391724 14409 Gabrr2 0 agagaaacggggaacaacaca cggcttaccgagataaaaggg 7 7 2 1.1.2.3.2.7 BCBC-5A-0 14094971 P102225 Cyp17a1 ProximalPromoter P102225 ProximalPromoter Unique Tile chr19:46726397-46727322 (-) NM_007809 - 112 46726285 13074 Cyp17a1 Cyp17|p450c17 cytochrome P450, family 17, subfamily a, polypeptide 1 MGI:88586 Mm.1262 19 19 C3|19 46.0 cM CYP17A1 1586 NM_025563 + 15894 46743216 66439 2010012O05Rik 0 tcttgagtgggccatagtgtttt gctggctaaagagcagagagttg 7 7 3 1.1.2.3.3.7 BCBC-5A-0 14094990 P103065 Stat5b ProximalPromoter P103065 ProximalPromoter Unique Tile chr11:100666919-100667937 (-) NM_011489 - 288 100666631 20851 Stat5b - signal transducer and activator of transcription 5B MGI:103035 Mm.34064 11 11 D|11 60.5 cM STAT5B 6777 NM_011488 + 7555 100675492 20850 Stat5a 0 aagcttgaacagagaaatgtgcc cccctaacacatgctgttttgtt 7 7 4 1.1.2.3.4.7 BCBC-5A-0 14095009 P000625 Blank P000625 Buffer Control Negative Blank 7 7 5 1.1.2.3.5.7 BCBC-5A-0 14095028 P106853 Mup4 DistalPromoter P106853 DistalPromoter Unique Tile chr4:60056133-60058186 (-) NM_008648 - 1414 60054719 17843 Mup4 Mup-4 major urinary protein 4 MGI:97236 Mm.237772 4 4 B3|4 27.8 cM NM_021053 - 47023 60009110 30936 Tscot 0 aatgggaaaacccaaggacctat gacaatggtctctgacgtggtct 7 7 6 1.1.2.3.6.7 BCBC-5A-0 14095047 P105740 Pon1 DistalPromoter P105740 DistalPromoter Unique Tile chr6:5145295-5147196 (-) NM_011134 - 1471 5143824 18979 Pon1 Pon paraoxonase 1 MGI:103295 Mm.237657 6 6 A2|6 0.5 cM PON1 5444 2 agttgggaacagttgatgcatgt tgaagccttttggaccttctagg 7 7 7 1.1.2.3.7.7 BCBC-5A-0 14095066 P105955 Gosr2 DistalPromoter P105955 DistalPromoter Unique Tile chr11:103514578-103516624 (-) NM_019650 - 794 103513784 56494 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 MGI:1927204 Mm.195451 11 11 E1|11 62.0 cM GOSR2 9570 NM_001033212 + 48980 103465598 104582 Rprml 0 tccactgcatcccttagtgtcat gattttcctgtatcctgcatccc 7 7 8 1.1.2.3.8.7 BCBC-5A-0 14095085 P104193 Serpina6 DistalPromoter P104193 DistalPromoter Unique Tile chr12:104059792-104061666 (-) NM_007618 - 1652 104058140 12401 Serpina6 AI265318|AV104445|Cbg serine (or cysteine) peptidase inhibitor, clade A, member 6 MGI:88278 Mm.290079 12 12 E|12 51.0 cM SERPINA6 866 NM_144834 - 27321 104032471 217847 Serpina10 0 ttcagacaacttgtgcaaggtca gatatccactggtgctcaaatgc 7 7 9 1.1.2.3.9.7 BCBC-5A-0 14095104 P205950 Tubb5 ProximalPromoter P205950 ProximalPromoter Unique Tile chr17:35446551-35447612 (-) NM_011655 - 266 35446285 22154 Tubb5 AA408537|AI596182|B130022C14Rik|M(beta)5 tubulin, beta 5 MGI:107812 Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058; Mm.273538; Mm.392322; Mm.423058 17 17 B1 TUBB 203068 NM_008027 + 15142 35431409 14251 Flot1 1 aactcccttcttcctgctcagtt ggggttatcttgtgtgtgtgtga 7 7 10 1.1.2.3.10.7 BCBC-5A-0 14095123 P200103 Nelf ProximalPromoter P200103 ProximalPromoter Unique Tile chr2:24875152-24876237 (+) NM_001039386;NM_001039387;NM_020276; + 150 24876387 56876 Nelf - nasal embryonic LHRH factor MGI:1861755 Mm.42956 2 2 A3 NELF 26012 NM_172204 - 40921 24917158 241275 Noxa1 0 ttagggagtaggtgaggagggtc gggaaaccctagtttccttcaga 7 7 11 1.1.2.3.11.7 BCBC-5A-0 14095142 P204065 Ythdf3 ProximalPromoter P204065 ProximalPromoter Unique Tile chr3:16374117-16375100 (+) NM_172677 + 262 16375362 229096 Ythdf3 9130022A11Rik YTH domain family 3 MGI:1918850 Mm.23834 3 3 A1 YTHDF3 253943 0 ctcacagagatccaccctcaagt cgctctcaatgaatgctttctaa 7 7 12 1.1.2.3.12.7 BCBC-5A-0 14095161 P204614 Ktn1 ProximalPromoter P204614 ProximalPromoter Unique Tile chr14:46570069-46571029 (+) NM_008477 + 14626 46585655 16709 Ktn1 - kinectin 1 MGI:109153 Mm.3110 14 14 C2 KTN1 3895 2 agctactaatggcctcacttccc atccattcaaccctactctgcct 7 7 13 1.1.2.3.13.7 BCBC-5A-0 14095180 P205860 Slfn3 ProximalPromoter P205860 ProximalPromoter Unique Tile chr11:83006484-83007514 (+) NM_011409 + 10 83007524 20557 Slfn3 - schlafen 3 MGI:1329005 Mm.290922 11 11 C NM_011410 + 15104 82991380 20558 Slfn4 0 gaagatttgcgattgtggttttc tttcttttaccagagtccctccc 7 7 14 1.1.2.3.14.7 BCBC-5A-0 14095199 P206710 Espn ProximalPromoter P206710 ProximalPromoter Unique Tile chr4:150972961-150973902 (-) NM_207688;NM_207691;NM_207687;NM_019585;NM_207690;NM_207689; - 236 150972725 56226 Espn je espin MGI:1861630 Mm.264215 4 4 E1|4 80.1 cM ESPN 83715 NM_033042 + 12819 150960142 85030 Tnfrsf25 2 ggatcctggaaagttctggttct gagcttactgaggacatgggaga 7 7 15 1.1.2.3.15.7 BCBC-5A-0 14095218 P200852 Myh8 ProximalPromoter P200852 ProximalPromoter Unique Tile chr11:67092290-67093305 (+) NM_177369 + 13 67093318 17885 Myh8 4832426G23Rik|AI327267|KIAA4211|MyHC-pn|Myhs-p|Myhsp|mKIAA4211 myosin, heavy polypeptide 8, skeletal muscle, perinatal MGI:1339712 Mm.340163 11 11 B3|11 35.0 cM MYH8 4626 NM_010855 + 38067 67054223 17884 Myh4 0 agagtgtccattgtctacgagcc aagtttgtagcgacatttggcat 7 7 16 1.1.2.3.16.7 BCBC-5A-0 14095237 P200930 Nfatc2ip ProximalPromoter P200930 ProximalPromoter Unique Tile chr7:126187712-126188639 (-) NM_010900 - 173 126187885 18020 Nfatc2ip D7Ertd304e|MGC130564|NIP45 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein MGI:1329015 Mm.1389 7 7 F4|7 61.0 cM NFATC2IP 84901 NM_009844 - 17345 126205984 12478 Cd19 1 tcccagtcagtctacaatcacga ctgtcactgaccaagtccacaag 7 7 17 1.1.2.3.17.7 BCBC-5A-0 14095256 P207125 Tsg101 ProximalPromoter P207125 ProximalPromoter Unique Tile chr7:46788186-46789212 (-) NM_021884 - 229 46787957 22088 Tsg101 AI255943|CC2 tumor susceptibility gene 101 MGI:106581 Mm.241334 7 7 B5 TSG101 7251 NM_001040695 - 37328 46826540 54122 Uevld 0 ggatgtgtgtgtaccatctgcat ctcacagaactagctcgtggaca 7 7 18 1.1.2.3.18.7 BCBC-5A-0 14095275 P207397 1500015O10Rik ProximalPromoter P207397 ProximalPromoter Unique Tile chr1:43674445-43675524 (+) NM_024283 + 286 43675238 78896 1500015O10Rik Ecrg4 RIKEN cDNA 1500015O10 gene MGI:1926146 Mm.50109 1 1 C1 ECRG4 84417 2 caggttcacctttcccttctttt gtatcctccacttacctggaccc 7 7 19 1.1.2.3.19.7 BCBC-5A-0 14094934 P100366 Gatad2a ProximalPromoter P100366 ProximalPromoter End Repeat Tile chr8:72940230-72941187 (-) NM_145596 - 14877 72925353 234366 Gatad2a 1110066C11Rik|BC031407|C80248|MGC29315|MGC36975 GATA zinc finger domain containing 2A MGI:2384585 Mm.270044 8 8 B3.3 GATAD2A 54815 NM_028993 - 30536 72971723 74549 9130404D08Rik 0 gctggcttgaacttgctcagt ctccagcccgagctaaatctt 7 8 1 1.1.2.3.1.8 BCBC-5A-0 14094953 P101488 ProximalPromoter P101488 ProximalPromoter Unique Tile chr1:141746535-141747590 (-) 0 tttcacaagggtttgggattg tgcctctattctctccctccc 7 8 2 1.1.2.3.2.8 BCBC-5A-0 14094972 P102249 Drg1 ProximalPromoter P102249 ProximalPromoter End Repeat Tile chr11:3166743-3167702 (-) NM_007879 - 354 3166389 13494 Drg1 AA408859|AI132520|Nedd3 developmentally regulated GTP binding protein 1 MGI:1343297 Mm.3250 11 11 A1 DRG1 4733 NM_019574 + 22739 3190441 56218 Zfp278 0 ctatgtccctcatcatcagaccc tgtagagagactcagaggggtgg 7 8 3 1.1.2.3.3.8 BCBC-5A-0 14094991 P103371 Akap8l ProximalPromoter P103371 ProximalPromoter Unique Tile chr17:32082299-32083278 (-) NM_017476 - 100 32082199 54194 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like MGI:1860606 Mm.281005 17 17 B2 AKAP8L 26993 NM_019774 - 29538 32052761 56399 Akap8 0 aacaaggctggtactgggttaca cgtgacagtggttggagatactg 7 8 4 1.1.2.3.4.8 BCBC-5A-0 14095010 P000649 Blank P000649 Buffer Control Negative Blank 7 8 5 1.1.2.3.5.8 BCBC-5A-0 14095029 P106874 Pak3 DistalPromoter P106874 DistalPromoter Unique Tile chrX:138908689-138910764 (+) NM_008778 + 1348 138912112 18481 Pak3 Pak65alpha|Pak65beta|Stk4|mPAK-3 p21 (CDKN1A)-activated kinase 3 MGI:1339656 Mm.40035 X X F2 PAK3 5063 0 ctaataggattttgccccttccc cctactgtagagcccctctgctc 7 8 6 1.1.2.3.6.8 BCBC-5A-0 14095048 P107363 Mrpl23 DistalPromoter P107363 DistalPromoter Unique Tile chr7:142339134-142341195 (+) NM_011288 + 1311 142342506 19935 Mrpl23 L23mrp|Rpl23|Rpl23l mitochondrial ribosomal protein L23 MGI:1196612 Mm.12144; Mm.314652; Mm.12144; Mm.314652; Mm.12144; Mm.314652; Mm.12144; Mm.314652; Mm.12144; Mm.314652; Mm.12144; Mm.314652; Mm.12144; Mm.314652; Mm.12144; Mm.314652; Mm.12144; Mm.314652 7 7 F5|7 69.0 cM MRPL23 6150 NM_011620 + 30881 142308253 21957 Tnnt3 0 tgcagatcaagtcccctgtaaaa gctctgggagaagcatctaggtc 7 8 7 1.1.2.3.7.8 BCBC-5A-0 14095067 P105898 Prpf40a DistalPromoter P105898 DistalPromoter Unique Tile chr2:53014524-53016601 (-) NM_018785 - 1328 53013196 56194 Prpf40a 2810012K09Rik|FBP11|Fnbp11|Fnbp3 PRP40 pre-mRNA processing factor 40 homolog A (yeast) MGI:1860512 Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219; Mm.257474; Mm.392945; Mm.393219 2 2 C1 PRPF40A 55660 NM_022989 + 399 53014125 65103 Arl6ip6 1 agtggaccaatgtcatgcaaagt cgttaaaggtattgaagcccagg 7 8 8 1.1.2.3.8.8 BCBC-5A-0 14095086 P104217 Cirbp DistalPromoter P104217 DistalPromoter Unique Tile chr10:79567363-79569500 (+) NM_007705 + 1469 79570969 12696 Cirbp Cirp|R74941 cold inducible RNA binding protein MGI:893588 Mm.17898 10 10 C1|10 44.0 cM CIRBP 1153 NM_027207 + 6572 79576072 69770 1600002K03Rik 0 cagtcacgtacacctaaccctgc gcctcaaactcagaaatccacct 7 8 9 1.1.2.3.9.8 BCBC-5A-0 14095105 P205975 Vill ProximalPromoter P205975 ProximalPromoter Unique Tile chr9:118900475-118901397 (+) NM_011700 + 102 118901499 22351 Vill Villp villin-like MGI:1201781 Mm.83817 9 9 F4 VILL 50853 NM_019676 - 40778 118942175 18799 Plcd1 0 ccagacacaggactagccaagtt agggagggcattcagagttagtc 7 8 10 1.1.2.3.10.8 BCBC-5A-0 14095124 P200128 Serpinb9b ProximalPromoter P200128 ProximalPromoter Unique Tile chr13:33033686-33034649 (+) NM_011452 + 229 33034878 20706 Serpinb9b 1600019A21Rik|R86|SPI-CI|Spi10|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9b MGI:894668 Mm.45371 13 13 A3.2|13 12.5 cM NM_009256 + 21609 33012077 20723 Serpinb9 1 ccataggttatacggagagcacg tagctgtcctgggaatctcactc 7 8 11 1.1.2.3.11.8 BCBC-5A-0 14095143 P204181 Cacna1a ProximalPromoter P204181 ProximalPromoter Unique Tile chr8:87305003-87306033 (+) NM_007578 + 565 87305468 12286 Cacna1a APCA|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|leaner|nmf352|rkr|rocker|tg|tottering calcium channel, voltage-dependent, P/Q type, alpha 1A subunit MGI:109482 Mm.334658 8 8 C3|8 38.5 cM CACNA1A 773 2 ccaggtctaggaaagtcagcaaa tttttggcgtattttctcaccac 7 8 12 1.1.2.3.12.8 BCBC-5A-0 14095162 P204638 Lrmp ProximalPromoter P204638 ProximalPromoter Unique Tile chr6:145077894-145078922 (+) NM_008511 + 50 145078972 16970 Lrmp AI553456|D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1 lymphoid-restricted membrane protein MGI:108424 Mm.843 6 6 G3|6 71.0 cM LRMP 4033 NM_001024468;NM_007532; - 44658 145033236 12035 Bcat1 0 gactgatggctgtcttccctcta cctctttcaccagaaggctgtta 7 8 13 1.1.2.3.13.8 BCBC-5A-0 14095181 P205884 Star ProximalPromoter P205884 ProximalPromoter Unique Tile chr8:27273272-27274187 (+) NM_011485 + 129 27274058 20845 Star AV363654|D8Ertd419e steroidogenic acute regulatory protein MGI:102760 Mm.293314 8 8 A2|8 9.0 cM STAR 6770 NM_026032 + 22137 27251135 67207 Lsm1 0 ctcatttccagagagttcccaga ccagactcacctttcatattccg 7 8 14 1.1.2.3.14.8 BCBC-5A-0 14095200 P206734 Tfg ProximalPromoter P206734 ProximalPromoter Unique Tile chr16:56642483-56643423 (-) NM_019678 - 178 56642305 21787 Tfg AI173908 Trk-fused gene MGI:1338041 Mm.235108 16 16 C1.1 TFG 10342 0 tcttccagcaacaagtccctaaa actggatgaccgagtgtaggaag 7 8 15 1.1.2.3.15.8 BCBC-5A-0 14095219 P200786 Zfp27 ProximalPromoter P200786 ProximalPromoter Unique Tile chr7:29615160-29616142 (-) NM_011754;NM_001037707; - 296 29614864 22689 Zfp27 Zfp-27|mkr-4|mszf76 zinc finger protein 27 MGI:99174 Mm.86747 7 7 B1 NM_178384 - 44511 29660653 72723 Zfp74 2 gcctgtaaaggtcagaaagggat aaagaacgtagacccaagcactg 7 8 16 1.1.2.3.16.8 BCBC-5A-0 14095238 P200954 Psmd9 ProximalPromoter P200954 ProximalPromoter Unique Tile chr5:123531028-123532040 (+) NM_026000 + 43118 123488922 67151 Psmd9 1500011J20Rik|2610202L11Rik|Bridge-1|P27 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 MGI:1914401 Mm.278997 5 5 F PSMD9 5715 0 tttcgctctccttatggctacag aagtgaccaaaccaggtgaaaaa 7 8 17 1.1.2.3.17.8 BCBC-5A-0 14095257 P207149 Nrgn ProximalPromoter P207149 ProximalPromoter Unique Tile chr9:37302616-37303683 (-) NM_022029 - 136 37302480 64011 Nrgn 0710001B06Rik|AI838505|NG|NG/RC3|Pss1|R75334|RC3 neurogranin MGI:1927184 Mm.335065 9 9 A4|9 17.0 cM NRGN 4900 NM_020518 + 13571 37289045 57276 Vsig2 0 ggctattggatgccaagtcatag aggcagatgtacgtcggagtaag 7 8 18 1.1.2.3.18.8 BCBC-5A-0 14095276 P207421 Pcbd1 ProximalPromoter P207421 ProximalPromoter Unique Tile chr10:60483634-60484583 (+) NM_025273 + 134 60484717 13180 Pcbd1 Dcoh|Pcbd pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1 MGI:94873 Mm.39473 10 10 B4|10 36.0 cM PCBD1 5092 0 gcttactgctctcgcagagaatc ggcaaaagctttgacatctcagt 7 8 19 1.1.2.3.19.8 BCBC-5A-0 14094935 P100672 Bag1 ProximalPromoter P100672 ProximalPromoter Unique Tile chr4:41137440-41138393 (-) NM_009736 - 513 41136927 12017 Bag1 Rap46 Bcl2-associated athanogene 1 MGI:108047 Mm.688 4 4 B1 BAG1 573 NM_029814 + 178 41137262 76959 Chmp5 0 cattaaaacccagcctccctc gagtcttcttcatccccaccc 7 9 1 1.1.2.3.1.9 BCBC-5A-0 14094954 P101512 Fzr1 ProximalPromoter P101512 ProximalPromoter Unique Tile chr10:80782062-80783075 (-) NM_019757 - 482 80781580 56371 Fzr1 AW108046|FZR|FZR2|Fyr|HCDH|HCDH1 fizzy/cell division cycle 20 related 1 (Drosophila) MGI:1926790 Mm.24202 10 10 C1 FZR1 51343 NM_133964 + 4564 80787639 102115 Dohh 0 cagaagtcctttgcacaaccc agtaactaggcgcggaggaag 7 9 2 1.1.2.3.2.9 BCBC-5A-0 14094973 P102273 Fabp2 ProximalPromoter P102273 ProximalPromoter Unique Tile chr3:122886091-122887148 (+) NM_007980 + 265 122887413 14079 Fabp2 Fabpi|I-FABP fatty acid binding protein 2, intestinal MGI:95478 Mm.28398 3 3 G1|3 55.0 cM FABP2 2169 NM_024461 + 29273 122916421 67704 1810037I17Rik 0 tccccatagtgttcctgtgtttt gatggctgacacttttaatcgct 7 9 3 1.1.2.3.3.9 BCBC-5A-0 14094992 P103395 ProximalPromoter P103395 ProximalPromoter Unique Tile chr2:66285581-66286501 (-) 0 cagggaaactttttatgtggcag agggtttctctgtatagccctgg 7 9 4 1.1.2.3.4.9 BCBC-5A-0 14095011 P000583 Blank P000583 Buffer Control Negative Blank 7 9 5 1.1.2.3.5.9 BCBC-5A-0 14095030 P106896 Pik3cd DistalPromoter P106896 DistalPromoter Unique Tile chr4:148507942-148509969 (-) NM_001029837;NM_008840; - 34547 148542489 18707 Pik3cd 2410099E07Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide MGI:1098211 Mm.229108 4 4 E2 PIK3CD 5293 2 gaagtggagaggaggcagaactc ctttgaaaacctgcctgcctagt 7 9 6 1.1.2.3.6.9 BCBC-5A-0 14095049 P107385 Slc2a3 DistalPromoter P107385 DistalPromoter Unique Tile chr6:122707468-122709376 (-) NM_011401 - 654 122708122 20527 Slc2a3 AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3 solute carrier family 2 (facilitated glucose transporter), member 3 MGI:95757 Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108; Mm.2559; Mm.395108 6 6 F2|6 59.0 cM SLC2A3 6515 NM_028016 + 34257 122673211 71950 Nanog 0 tccacctcagttttctcagcaag ttaatcttcgtggaaatgccctt 7 9 7 1.1.2.3.7.9 BCBC-5A-0 14095068 P105920 Pfn2 DistalPromoter P105920 DistalPromoter Unique Tile chr3:57936384-57938587 (-) NM_019410 - 918 57935466 18645 Pfn2 Pfn profilin 2 MGI:97550 Mm.271744 3 3 D|3 29.3 cM PFN2 5217 1 tcctgcatcacagtaacgaacaa acttcctaatgtgaccccgtgat 7 9 8 1.1.2.3.8.9 BCBC-5A-0 14095087 P000829 Blank P000829 Buffer Control Negative Blank 7 9 9 1.1.2.3.9.9 BCBC-5A-0 14095106 P205999 Zfpn1a2 ProximalPromoter P205999 ProximalPromoter Unique Tile chr1:69619167-69620080 (-) NM_011770 - 138 69619029 22779 Zfpn1a2 Helios|Znfn1a2 zinc finger protein, subfamily 1A, 2 (Helios) MGI:1342541 Mm.106343 1 1 C3 ZNFN1A2 22807 0 tgatcgaatgacttgttgctgtt cagatcggctgataaacaaaacc 7 9 10 1.1.2.3.10.9 BCBC-5A-0 14095125 P200153 Tsnaxip1 ProximalPromoter P200153 ProximalPromoter Unique Tile chr8:108716112-108717063 (+) NM_024445 + 191 108716872 72236 Tsnaxip1 1700016K08Rik|MGC118240|TXI1 translin-associated factor X (Tsnax) interacting protein 1 MGI:1919486 Mm.386810 8 8 D2 TSNAXIP1 55815 NM_145824 - 212 108716324 74334 Ranbp10 0 ggccgatgtagttgtacttgtcc gctgaagtcctacccaaagaaca 7 9 11 1.1.2.3.11.9 BCBC-5A-0 14095144 P204205 Cav3 ProximalPromoter P204205 ProximalPromoter Unique Tile chr6:112424639-112425549 (+) NM_007617 + 268 112425281 12391 Cav3 AI385751|Cav-3|M-cav|M-caveolin|caveolin-3 caveolin 3 MGI:107570 Mm.3924 6 6 E1|6 48.3 cM CAV3 859 0 gacagtcgagatgaactgggagt gtggctggtatcgttgatagtcc 7 9 12 1.1.2.3.12.9 BCBC-5A-0 14095163 P204572 Kpnb1 ProximalPromoter P204572 ProximalPromoter Unique Tile chr11:97003994-97004949 (-) NM_008379 - 12 97003982 16211 Kpnb1 AA409963|IPOB|Impnb|MGC8315 karyopherin (importin) beta 1 MGI:107532 Mm.251013 11 11 D KPNB1 3837 NM_198100 - 38192 96965802 73174 Tbkbp1 0 aaacgaagtctggacatcaaagc agtgagtgagtgagaggcggat 7 9 13 1.1.2.3.13.9 BCBC-5A-0 14095182 P205908 Tcea1 ProximalPromoter P205908 ProximalPromoter Unique Tile chr1:4846803-4847786 (+) NM_011541 + 108 4847894 21399 Tcea1 MGC103154|S-II transcription elongation factor A (SII) 1 MGI:1196624 Mm.207263; Mm.416663; Mm.207263; Mm.416663; Mm.207263; Mm.416663; Mm.207263; Mm.416663; Mm.207263; Mm.416663; Mm.207263; Mm.416663; Mm.207263; Mm.416663; Mm.207263; Mm.416663; Mm.207263; Mm.416663; Mm.207263; Mm.416663; Mm.207263; Mm.416663; Mm.207263; Mm.416663; Mm.207263; Mm.416663 1 1 A1 TCEA1 6917 NM_008866 + 48830 4797973 18777 Lypla1 0 ggtttaactggacacagacccac gaaagtagaagtggctcgctcag 7 9 14 1.1.2.3.14.9 BCBC-5A-0 14095201 P206759 Nme3 ProximalPromoter P206759 ProximalPromoter Unique Tile chr17:24623116-24624154 (+) NM_019730 + 46 24624108 79059 Nme3 1810009F08Rik|AI413736|DR-nm23|Ndk3|Nm23-DR|Nm23-M3 expressed in non-metastatic cells 3 MGI:1930182 Mm.430765 17 17 A3.3 NME3 4832 NM_023260 + 356 24622760 79044 Mrps34 0 cttgtttccactttcattttgcc gggaagaggttagcaaagatggt 7 9 15 1.1.2.3.15.9 BCBC-5A-0 14095220 P200810 Fbxl4 ProximalPromoter P200810 ProximalPromoter Unique Tile chr4:22447077-22448169 (+) NM_172988 + 230 22448399 269514 Fbxl4 4732456I21|AI836810|FBL4|FBL5 F-box and leucine-rich repeat protein 4 MGI:2140367 Mm.40708 4 4 A3 FBXL4 26235 0 cacccagttctaaccctctcctt gtagttctgctggagcttcttcg 7 9 16 1.1.2.3.16.9 BCBC-5A-0 14095239 P210205 C1ql3 ProximalPromoter P210205 ProximalPromoter Unique Tile chr2:12928770-12929749 (-) NM_153155 - 53 12928717 227580 C1ql3 1110065A22Rik|AI661623|C1ql|K100 C1q-like 3 MGI:2387350 Mm.229322; Mm.288713; Mm.398046; Mm.229322; Mm.288713; Mm.398046; Mm.229322; Mm.288713; Mm.398046; Mm.229322; Mm.288713; Mm.398046; Mm.229322; Mm.288713; Mm.398046 2 2 A1 1 cgtctgggctagacaaggaagta atcctcttgtctgcttttggaca 7 9 17 1.1.2.3.17.9 BCBC-5A-0 14095258 P207173 ProximalPromoter P207173 ProximalPromoter No Hits Tile 0 ggtcatttgtcacaatcgatgaa cctggctacaagagcagaagaaa 7 9 18 1.1.2.3.18.9 BCBC-5A-0 14095277 P207446 Tmem93 ProximalPromoter P207446 ProximalPromoter Unique Tile chr11:72993350-72994312 (-) NM_025318 - 118 72993232 66048 Tmem93 0610009E20Rik|0610025L18Rik transmembrane protein 93 MGI:1913298 Mm.73608 11 11 B4 TMEM93 83460 NM_029564 + 73 72993277 76281 Tax1bp3 2 cactgatgcttctctcttgggat ccagatgctgattggctagagac 7 9 19 1.1.2.3.19.9 BCBC-5A-0 14094936 P100696 Car2 ProximalPromoter P100696 ProximalPromoter Unique Tile chr3:14862321-14863413 (+) NM_009801 + 36 14863449 12349 Car2 AI131712|CAII|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 MGI:88269 Mm.1186 3 3 A1|3 10.5 cM CA2 760 NM_007606 + 22040 14840281 12350 Car3 1 tggcactgggtgaaataaagg cttttataggctcccgccaac 7 10 1 1.1.2.3.1.10 BCBC-5A-0 14094955 P101446 Paf1 ProximalPromoter P101446 ProximalPromoter Unique Tile chr7:28100660-28101463 (+) NM_019458 + 292 28101755 54624 Paf1 5730511K23Rik|AA675045|FLJ11123|MGC102062 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) MGI:1923988 Mm.7916 7 7 A3 PAF1 54623 NM_026042 - 30 28101433 67224 Ixl 0 accttcctttgcctccagaag acgcatttatgacgcatttcc 7 10 2 1.1.2.3.2.10 BCBC-5A-0 14094974 P102297 Gabrb1 ProximalPromoter P102297 ProximalPromoter Unique Tile chr5:71978295-71979259 (+) NM_008069 + 109 71979150 14400 Gabrb1 AW061132|Gabrb-1 gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 MGI:95619 Mm.226704 5 5 C3.2|5 40.0 cM GABRB1 2560 NM_010251 - 40852 71937443 14397 Gabra4 0 aagcttgggcgactaaaacctac agagagagagattgaagcaggca 7 10 3 1.1.2.3.3.10 BCBC-5A-0 14094993 P103419 Hgfac ProximalPromoter P103419 ProximalPromoter Unique Tile chr5:35357334-35358236 (+) NM_019447 + 212 35358448 54426 Hgfac HGFA hepatocyte growth factor activator MGI:1859281 Mm.27369 5 5 B2 HGFAC 3083 NM_172708 + 15486 35373722 231134 A930013K19Rik 0 cctagcactcatagcatctgcct aacacaaccttcaagtctcagcc 7 10 4 1.1.2.3.4.10 BCBC-5A-0 14095012 P000607 Blank P000607 Buffer Control Negative Blank 7 10 5 1.1.2.3.5.10 BCBC-5A-0 14095031 P104715 Mbd2 DistalPromoter P104715 DistalPromoter Unique Tile chr18:70690461-70692266 (+) NM_010773 + 1290 70693556 17191 Mbd2 MBD2a methyl-CpG binding domain protein 2 MGI:1333813 Mm.322 18 18 E2|18 44.0 cM MBD2 8932 NM_011972 - 34771 70655690 26447 Poli 0 gcagagacaaatgctgaacacct aaaatccgacttgctcagcctac 7 10 6 1.1.2.3.6.10 BCBC-5A-0 14095050 P107407 Vps45 DistalPromoter P107407 DistalPromoter Unique Tile chr3:96144600-96146430 (-) NM_013841 - 740 96143860 22365 Vps45 AI462172|AW554165|mVps45 vacuolar protein sorting 45 (yeast) MGI:891965 Mm.263185 3 3 F2.1|3 50.0 cM VPS45A 11311 NM_001025614;NM_001025613; + 43501 96189931 229603 Otud7b 2 agaagaagtcaaccctggacacc tatgcgaagtttccaaatccctt 7 10 7 1.1.2.3.7.10 BCBC-5A-0 14095069 P105942 Hao3 DistalPromoter P105942 DistalPromoter Unique Tile chr3:99023228-99025150 (-) NM_019545 - 954 99022274 56185 Hao3 AI325478|HAOX3 hydroxyacid oxidase (glycolate oxidase) 3 MGI:1860477 Mm.281874 3 3 F2.2 HAO2 51179 NM_008293 - 34373 98988855 15492 Hsd3b1 0 ttgcctccaggttctttccttag agtgctcctctgagtgtgtacgg 7 10 8 1.1.2.3.8.10 BCBC-5A-0 14095088 P000925 Blank P000925 Buffer Control Negative Blank 7 10 9 1.1.2.3.9.10 BCBC-5A-0 14095107 P205932 Tnc ProximalPromoter P205932 ProximalPromoter Unique Tile chr4:63533391-63534353 (-) NM_011607 - 26304 63507087 21923 Tnc AI528729|C130033P17Rik|Hxb|MGC144208|MGC144209|TN|TN-C|Ten|tenascin-C tenascin C Mm.980 4 4 C1|4 32.2 cM 0 ctcactgtttctggtcaccaatg tcagttggtgagttaaaggcaca 7 10 10 1.1.2.3.10.10 BCBC-5A-0 14095126 P200178 Nkx2-6 ProximalPromoter P200178 ProximalPromoter Unique Tile chr14:68124082-68125070 (+) NM_010920 + 278 68125348 18092 Nkx2-6 AV044928|Nkx-2.6|Nkx2.6|Tix|tinman NK2 transcription factor related, locus 6 (Drosophila) MGI:97351 Mm.390691 14 14 D1|14 30.0 cM NKX2-6 137814 NM_010921 + 18951 68144021 18095 Nkx3-1 0 tttgggaatgtaacaccaaaacc ttcctcttctgtagtggcagtcc 7 10 11 1.1.2.3.11.10 BCBC-5A-0 14095145 P204229 Cd79a ProximalPromoter P204229 ProximalPromoter Unique Tile chr7:24605399-24606345 (+) NM_007655 + 72 24606273 12518 Cd79a Ig-alpha|Iga|Ly-54|Ly54|mb-1 CD79A antigen (immunoglobulin-associated alpha) MGI:101774 Mm.1355 7 7 A3|7 5.5 cM CD79A 973 NM_008488 + 5470 24611815 16801 Arhgef1 0 ctcttgcagagaaccagggttta aacaggcgtatgacaagaagagg 7 10 12 1.1.2.3.12.10 BCBC-5A-0 14095164 P204596 Kif1a ProximalPromoter P204596 ProximalPromoter Unique Tile chr1:94932234-94933248 (-) NM_008440 - 6 94932228 16560 Kif1a ATSV|C630002N23Rik|Gm1626|Kns1 kinesin family member 1A MGI:108391 Mm.276408 1 1 E1-E2 KIF1A 547 NM_016702 + 32433 94965681 11611 Agxt 0 tgaagaggaagcttgaaacccta aactgatgcttcttactgcctgc 7 10 13 1.1.2.3.13.10 BCBC-5A-0 14095183 P205050 Tgm3 ProximalPromoter P205050 ProximalPromoter Unique Tile chr2:129678144-129679205 (+) NM_009374 + 24584 129703789 21818 Tgm3 AI893889 transglutaminase 3, E polypeptide MGI:98732 Mm.2961 2 2 F1 TGM3 7053 0 gcaggtagaggttttctcccatt atggggaaaagagaaatcagagg 7 10 14 1.1.2.3.14.10 BCBC-5A-0 14095202 P206783 Cyp11a1 ProximalPromoter P206783 ProximalPromoter Unique Tile chr9:57811819-57812851 (+) NM_019779 + 298 57813149 13070 Cyp11a1 Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc cytochrome P450, family 11, subfamily a, polypeptide 1 MGI:88582 Mm.302865 9 9 B|9 31.0 cM CYP11A1 1583 2 gagttcaaggccaacctgatcta tcatgggaagaaaatgaggctta 7 10 15 1.1.2.3.15.10 BCBC-5A-0 14095221 P200834 Traf1 ProximalPromoter P200834 ProximalPromoter Unique Tile chr2:34784013-34784926 (-) NM_009421 - 232 34783781 22029 Traf1 4732496E14Rik Tnf receptor-associated factor 1 MGI:101836 Mm.239514 2 2 B TRAF1 7185 NM_028716 - 48033 34735980 74016 Phf19 1 ttgagaatcggcgacttttatgt gcagcatttgatacacacacaca 7 10 16 1.1.2.3.16.10 BCBC-5A-0 14095240 P210229 Syne1 ProximalPromoter P210229 ProximalPromoter Unique Tile chr10:4794947-4795927 (+) NM_022027;NM_153399; + 79 4795848 64009 Syne1 8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|KIAA1756|MGC62825|Myne1|SYNE-1|SYNE-1B|mKIAA1756 synaptic nuclear envelope 1 MGI:1927152 Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419; Mm.331626; Mm.393419 10 10 A1 SYNE1 23345 NM_026793 - 42187 4752760 68632 Myct1 0 cgcttcaatcaccttccataatc gacagagtacaacaatcccagcc 7 10 17 1.1.2.3.17.10 BCBC-5A-0 14095259 P207107 Pcbp3 ProximalPromoter P207107 ProximalPromoter Unique Tile chr10:76405883-76406953 (-) NM_021568 - 379 76405504 59093 Pcbp3 AlphaCP-3 poly(rC) binding protein 3 MGI:1890470 Mm.272803 10 10 B5.1-B5.3 PCBP3 54039 0 ttcagacctacggagtcttcctg tctggaaaggttagtcaactggc 7 10 18 1.1.2.3.18.10 BCBC-5A-0 14095278 P207470 Dnajc15 ProximalPromoter P207470 ProximalPromoter Unique Tile chr14:76609205-76610231 (-) NM_025384 - 133 76609072 66148 Dnajc15 1110003P16Rik|Dnajd1 DnaJ (Hsp40) homolog, subfamily C, member 15 MGI:1913398 Mm.248046 14 14 D3 DNAJC15 29103 NM_029495;NM_178825; + 28314 76638545 108670 Epsti1 0 atttccatgtggaatttgtgacc ccgataaactgaccctgtcaaag 7 10 19 1.1.2.3.19.10 BCBC-5A-0 14094937 P100720 Cebpb ProximalPromoter P100720 ProximalPromoter Unique Tile chr2:167378598-167379666 (+) NM_009883 + 453 167380119 12608 Cebpb CRP2|IL-6DBP|LAP|NF-IL6|NF-M|Nfil6 CCAAT/enhancer binding protein (C/EBP), beta MGI:88373 Mm.347406 2 2 H3|2 95.5 cM CEBPB 1051 NM_177851 + 2715 167382381 329562 A530013C23Rik 0 cagggacagaaggatgacagg gggaagcagaactctccaggt 7 11 1 1.1.2.3.1.11 BCBC-5A-0 14094956 P101470 ProximalPromoter P101470 ProximalPromoter Unique Tile chr14:118412427-118413334 (+) 0 ttctggttgagtttggccagt actacccagtgcttgcaccat 7 11 2 1.1.2.3.2.11 BCBC-5A-0 14094975 P102603 Supt6h ProximalPromoter P102603 ProximalPromoter Unique Tile chr11:78062121-78063069 (-) NM_009297 - 224 78061897 20926 Supt6h 5131400N11Rik|AI132449|SPT6|mKIAA0162 suppressor of Ty 6 homolog (S. cerevisiae) MGI:107726 Mm.20755 11 11 B5|11 44.91 cM SUPT6H 6830 NM_009143 + 75 78062196 20316 Sdf2 0 caattacagacctaggccaccac gtcttctcttccatcttggcgta 7 11 3 1.1.2.3.3.11 BCBC-5A-0 14094994 P103443 Mpp5 ProximalPromoter P103443 ProximalPromoter Unique Tile chr12:79666987-79667998 (+) NM_019579 + 138 79667860 56217 Mpp5 3830420B02Rik|AI255216|AI644496|Pals1 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) MGI:1927339 Mm.313594 12 12 C3 MPP5 64398 0 tggatttaggtccagcagaagag aacctgttgattaagatcgccac 7 11 4 1.1.2.3.4.11 BCBC-5A-0 14095013 P000631 Blank P000631 Buffer Control Negative Blank 7 11 5 1.1.2.3.5.11 BCBC-5A-0 14095032 P104739 Ntan1 DistalPromoter P104739 DistalPromoter Unique Tile chr16:13729529-13731784 (+) NM_010946 + 1070 13732854 18203 Ntan1 - N-terminal Asn amidase MGI:108471 Mm.380410 16 16 A1|16 8.7 cM NTAN1 123803 NM_001039521 + 35253 13694276 106298 Rrn3 0 ctcattatggatggttgtgagcc gctattgaggagctgcttggaat 7 11 6 1.1.2.3.6.11 BCBC-5A-0 14095051 P107351 Prkdc DistalPromoter P107351 DistalPromoter Unique Tile chr16:15548212-15550367 (+) NM_011159 + 1099 15551466 19090 Prkdc AI326420|AU019811|DNA-PK|DNA-PKcs|DNAPDcs|DNAPK|DNPK1|HYRC1|XRCC7|scid|slip protein kinase, DNA activated, catalytic polypeptide MGI:104779 Mm.71 16 16 B1|16 9.2 cM PRKDC 5591 NM_008565 - 567 15550934 17217 Mcm4 0 ttgctctgacgataggactcagg acggaagttcgaagtgaggaaag 7 11 7 1.1.2.3.7.11 BCBC-5A-0 14095070 P105566 Plcd1 DistalPromoter P105566 DistalPromoter Unique Tile chr9:118943287-118945387 (-) NM_019676 - 1093 118942194 18799 Plcd1 AW212592|C79986 phospholipase C, delta 1 MGI:97614 Mm.23963 9 9 F3 PLCD1 5333 NM_011700 + 31142 118912145 22351 Vill 0 cactgaacgtccacattaaagcc cacctgagaccaagaactcctga 7 11 8 1.1.2.3.8.11 BCBC-5A-0 14095089 P001021 Blank P001021 Buffer Control Negative Blank 7 11 9 1.1.2.3.9.11 BCBC-5A-0 14095108 P205956 Tyr ProximalPromoter P205956 ProximalPromoter Unique Tile chr7:87369016-87369949 (-) NM_011661 - 106 87369122 22173 Tyr Tyr|albino|c|skc35 tyrosinase MGI:98880 Mm.238127 7 7 D3|7 44.0 cM TYR 7299 2 ttcatggagcagtgctattcaaa tgccaacaagttcttagaggagg 7 11 10 1.1.2.3.10.11 BCBC-5A-0 14095127 P201948 2210010L05Rik ProximalPromoter P201948 ProximalPromoter Unique Tile chr1:52672225-52673322 (-) NM_178081;NM_133829; - 362 52671863 98682 2210010L05Rik 9630025I22Rik|AI836200|AW212394 RIKEN cDNA 2210010L05 gene MGI:1922925 Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051; Mm.269793; Mm.398051 1 1 C1.1 FLJ20160 54842 0 ttaaaagcattatggttgtgggg ctgtctggttctaggcacaacct 7 11 11 1.1.2.3.11.11 BCBC-5A-0 14095146 P204253 Socs3 ProximalPromoter P204253 ProximalPromoter Unique Tile chr11:117785244-117786146 (-) NM_007707 - 8 117785252 12702 Socs3 CIS3|Cish3|EF-10|SOCS-3|SSI-3 suppressor of cytokine signaling 3 MGI:1201791 Mm.3468 11 11 E2 SOCS3 9021 NM_133757 + 16800 117802946 74451 Pgs1 1 gggatgagggtttctttcctcta gcaggcgagtgtagagtcagagt 7 11 12 1.1.2.3.12.11 BCBC-5A-0 14095165 P204620 Anpep ProximalPromoter P204620 ProximalPromoter Unique Tile chr7:79715868-79716837 (-) NM_008486 - 3 79715865 16790 Anpep Apn|Cd13|Lap-1|Lap1|p150 alanyl (membrane) aminopeptidase MGI:96749 Mm.4487 7 7 D2 ANPEP 290 NM_008589 + 31620 79684248 17293 Mesp2 0 cgcgtgatgagtagttttaaggg tgggtcggacaaatattaaccag 7 11 13 1.1.2.3.13.11 BCBC-5A-0 14095184 P205074 Tpd52 ProximalPromoter P205074 ProximalPromoter Unique Tile chr3:8987788-8988757 (-) NM_001025264;NM_009412;NM_001025261;NM_001025262;NM_001025263; - 200 8987588 21985 Tpd52 AI043038|mD52 tumor protein D52 MGI:107749 Mm.371590 3 3 A1-A2 TPD52 7163 0 aaatagtttctttgaggcccagc tcttcaaccccaagtttgtgact 7 11 14 1.1.2.3.14.11 BCBC-5A-0 14095203 P206716 Pitpnb ProximalPromoter P206716 ProximalPromoter Unique Tile chr5:111570085-111571150 (+) NM_019640 + 41 111571109 56305 Pitpnb AI256223|AU040890 phosphatidylinositol transfer protein, beta MGI:1927542 Mm.200516 5 - PITPNB 23760 NM_024477 + 41574 111528511 209683 Ttc28 2 ttattcctgcagctatccagctc aacgacccactcacaattcctta 7 11 15 1.1.2.3.15.11 BCBC-5A-0 14095222 P200858 BC027344 ProximalPromoter P200858 ProximalPromoter Unique Tile chr7:29567551-29568540 (+) NM_173738 - 5143 29562408 233057 BC027344 - cDNA sequence BC027344 MGI:2446235 Mm.296864 7 7 B1 NM_011754;NM_001037707; - 40708 29609248 22689 Zfp27 0 gagctaccactgctgattcctgt caatcgcaatatttgtgaggtga 7 11 16 1.1.2.3.16.11 BCBC-5A-0 14095241 P210253 Tmem10 ProximalPromoter P210253 ProximalPromoter Unique Tile chr19:41130292-41131470 (-) NM_153520 - 91 41130383 226115 Tmem10 Tmp10 transmembrane protein 10 MGI:2657025 Mm.54119 19 19 C3 TMEM10 93377 NM_009345 + 47594 41082698 21673 Dntt 2 gagctagagaaggacccaaggag ggtccacagtgagagaaaggcta 7 11 17 1.1.2.3.17.11 BCBC-5A-0 14095260 P207131 Rfrp ProximalPromoter P207131 ProximalPromoter Unique Tile chr6:50584157-50585100 (-) NM_021892 - 130 50584027 60531 Rfrp NPVF RFamide-related peptide MGI:1926488 Mm.157158 6 6 B3 C7orf9 64111 0 gttggcgagagtgcagaataact gagacagcaatgtttgtgtttgc 7 11 18 1.1.2.3.18.11 BCBC-5A-0 14095279 P001572 Blank P001572 Buffer Control Negative Blank 7 11 19 1.1.2.3.19.11 BCBC-5A-0 14094938 P100744 Dad1 ProximalPromoter P100744 ProximalPromoter Unique Tile chr14:53212196-53213267 (-) NM_010015 - 309 53211887 13135 Dad1 AI323713 defender against cell death 1 MGI:101912 Mm.319038 14 14 C2|14 24.0 cM DAD1 1603 NM_134076 + 4034 53217301 105501 Abhd4 0 gctgagacagggagaagggtt agttccggctctctttgatcc 7 12 1 1.1.2.3.1.12 BCBC-5A-0 14094957 P101494 ProximalPromoter P101494 ProximalPromoter Unique Tile chr19:14516377-14517425 (-) 0 gtctgtggcagctgaggtctt ggggtggagcatcaaatacaa 7 12 2 1.1.2.3.2.12 BCBC-5A-0 14094976 P102627 Tgif ProximalPromoter P102627 ProximalPromoter Unique Tile chr17:70756061-70757032 (-) NM_009372 - 6 70756055 21815 Tgif AA959811|AI462167 TG interacting factor MGI:1194497 Mm.101034 17 17 E1.3 TGIF 7050 2 ttcttcgttcaactctttggagc cagagtgagagagcagagggaag 7 12 3 1.1.2.3.3.12 BCBC-5A-0 14094995 P103377 Igfbpl1 ProximalPromoter P103377 ProximalPromoter Unique Tile chr4:45848155-45849136 (-) NM_018741 - 240 45847915 75426 Igfbpl1 2810011G06Rik|2810453O06Rik|IGFBPL insulin-like growth factor binding protein-like 1 MGI:1933198 Mm.3919 4 4 B2 IGFBPL1 347252 NM_028788 + 20923 45870059 74152 1300002K09Rik 0 cactcactgcccatctttcttct atgactctcagtcttcccaccag 7 12 4 1.1.2.3.4.12 BCBC-5A-0 14095014 P000655 Blank P000655 Buffer Control Negative Blank 7 12 5 1.1.2.3.5.12 BCBC-5A-0 14095033 P104763 Psmb1 DistalPromoter P104763 DistalPromoter Unique Tile chr17:15204483-15206297 (-) NM_011185 - 1243 15203240 19170 Psmb1 AA409053|C81484|Lmpc5 proteasome (prosome, macropain) subunit, beta type 1 MGI:104884 Mm.32912 17 17 A2|17 8.25 cM PSMB1 5689 NM_013684 + 389 15204872 21374 Tbp 0 gggagtccaatgctctcttttgt tgacattttccttagccacctca 7 12 6 1.1.2.3.6.12 BCBC-5A-0 14095052 P107372 Khdrbs1 DistalPromoter P107372 DistalPromoter Unique Tile chr4:129246123-129248217 (-) NM_011317 - 1537 129244586 20218 Khdrbs1 Sam68|p62 KH domain containing, RNA binding, signal transduction associated 1 MGI:893579 Mm.8256 4 4 D2.2 KHDRBS1 10657 NM_199305 - 46981 129199142 230770 Tmem39b 0 ttcctgggcagataactgatgaa tgttttgttgccaccttctgttt 7 12 7 1.1.2.3.7.12 BCBC-5A-0 14095071 P106236 Rpl15 DistalPromoter P106236 DistalPromoter Unique Tile chr14:17065107-17066859 (-) NM_025586 - 976 17064131 66480 Rpl15 2510008H07Rik|MGC107261 ribosomal protein L15 Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909; Mm.2050; Mm.387909 9 9 A3 NM_023526 + 753 17064354 69721 Nkiras1 0 aaggatgggtctctgtcctgaag attgagcggtacagtgtctcagc 7 12 8 1.1.2.3.8.12 BCBC-5A-0 14095090 P001117 Blank P001117 Buffer Control Negative Blank 7 12 9 1.1.2.3.9.12 BCBC-5A-0 14095109 P205981 Baz1b ProximalPromoter P205981 ProximalPromoter Unique Tile chr5:135470620-135471627 (+) NM_011714 + 368 135471995 22385 Baz1b C87820|WSTF|Wbscr9 bromodomain adjacent to zinc finger domain, 1B MGI:1353499 Mm.40331 5 5 G2 BAZ1B 9031 NM_009745 + 17502 135453118 12054 Bcl7b 0 cagggttgcaagaatctactgct aaaagcggaagactcaaagaggt 7 12 10 1.1.2.3.10.12 BCBC-5A-0 14095128 P201972 Lrrc48 ProximalPromoter P201972 ProximalPromoter Unique Tile chr11:60168630-60169668 (+) NM_029044 + 94 60169574 74665 Lrrc48 4930449E07Rik leucine rich repeat containing 48 MGI:1921915 Mm.133570 11 11 B2 LRRC48 83450 NM_153080;NM_001039092;NM_001039093; - 470 60169100 216810 Tom1l2 0 tacgcaagggtaagcagactagc tgcaacctctaatcttctggagc 7 12 11 1.1.2.3.11.12 BCBC-5A-0 14095147 P204187 Calcr ProximalPromoter P204187 ProximalPromoter Unique Tile chr6:3713466-3714456 (-) NM_007588 - 1136 3714602 12311 Calcr Clr calcitonin receptor MGI:101950 Mm.4642 6 6 A1|6 3.8 cM CALCR 799 2 ggaattgtcctcaacaccaagtc ccaatttccagacctttaagcct 7 12 12 1.1.2.3.12.12 BCBC-5A-0 14095166 P204644 Alad ProximalPromoter P204644 ProximalPromoter Unique Tile chr4:62006569-62007655 (-) NM_008525 - 145 62006424 17025 Alad Lv aminolevulinate, delta-, dehydratase MGI:96853 Mm.6988 4 4 B3|4 30.6 cM ALAD 210 NM_021498 - 3720 62011375 59001 Pole3 0 cgcctcactaaaacacacacaag cgaactcatcccagagttcactt 7 12 13 1.1.2.3.13.12 BCBC-5A-0 14095185 P205098 Hectd3 ProximalPromoter P205098 ProximalPromoter Unique Tile chr4:116492119-116493104 (-) NM_175244 + 175 116493279 76608 Hectd3 1700064K09Rik|AI467540|AW743312 HECT domain containing 3 MGI:1923858 Mm.251420 4 4 D1 HECTD3 79654 NM_009478 - 188 116492307 22275 Urod 0 tttggagtcctgtctttgtctcc tgactgcaagatttggaatctca 7 12 14 1.1.2.3.14.12 BCBC-5A-0 14095204 P206740 Arid3b ProximalPromoter P206740 ProximalPromoter Unique Tile chr9:57635068-57636146 (-) NM_019689 - 2697 57632371 56380 Arid3b Bdp|Dri2|MGC59291 AT rich interactive domain 3B (Bright like) MGI:1930768 Mm.425588 9 9 C ARID3B 10620 2 ggtgaaggagaacgatcagaaga gtagtgcgagacggaagtgactc 7 12 15 1.1.2.3.15.12 BCBC-5A-0 14095223 P200585 Rfx4 ProximalPromoter P200585 ProximalPromoter Unique Tile chr10:84266786-84267841 (+) NM_027689;NM_001024918; + 105 84267946 71137 Rfx4 4933412G19Rik|NYD-sp10 regulatory factor X, 4 (influences HLA class II expression) MGI:1918387 Mm.79070 10 10 C1 RFX4 5992 0 tgatttctttcccagggtgacta ggtaccttgtggtggaaagacag 7 12 16 1.1.2.3.16.12 BCBC-5A-0 14095242 P210278 ProximalPromoter P210278 ProximalPromoter No Hits Tile 2 tttctcaagctcaagacattccc caattttcacacagacagcgaac 7 12 17 1.1.2.3.17.12 BCBC-5A-0 14095261 P207155 Eral1 ProximalPromoter P207155 ProximalPromoter Unique Tile chr11:77896430-77897476 (-) NM_022313 - 110 77896540 57837 Eral1 2610524P08Rik|9130407C09Rik|AU019798|Era|MERA-S|MERA-W Era (G-protein)-like 1 (E. coli) MGI:1889295 Mm.21096 11 11 B5 ERAL1 26284 NM_145430 + 34344 77931820 216971 BC017647 0 aaaaggtgcagacttcacaaagc ctcgcctggttacctagaagaca 7 12 18 1.1.2.3.18.12 BCBC-5A-0 14095280 P001668 Blank P001668 Buffer Control Negative Blank 7 12 19 1.1.2.3.19.12 BCBC-5A-0 14094939 P100678 Bet1 ProximalPromoter P100678 ProximalPromoter Unique Tile chr6:4036747-4037830 (-) NM_009748 - 180 4036927 12068 Bet1 AW555236|Bet-1 blocked early in transport 1 homolog (S. cerevisiae) MGI:1343104 Mm.286457 6 6 A1 BET1 10282 0 gaagcaaagaaggcggaactt ccaaacttcgaacctcagcac 7 13 1 1.1.2.3.1.13 BCBC-5A-0 14094958 P101518 Ptges3 ProximalPromoter P101518 ProximalPromoter Unique Tile chr10:127460614-127461658 (+) NM_019766 + 272 127461930 56351 Ptges3 5730442A20Rik|Ptges|Tebp|cPGES|sid3177 prostaglandin E synthase 3 (cytosolic) MGI:1929282 Mm.305816 10 10 D3 PTGES3 10728 NM_013608 + 21995 127438619 17938 Naca 2 cttctacctgccaacccactg gcgtatacagcagaccccaag 7 13 2 1.1.2.3.2.13 BCBC-5A-0 14094977 P102651 Vamp3 ProximalPromoter P102651 ProximalPromoter Unique Tile chr4:149902151-149903173 (-) NM_009498 - 398 149901753 22319 Vamp3 D130027G05Rik|VAMP-3|ceb vesicle-associated membrane protein 3 MGI:1321389 Mm.273930 4 4 E1 VAMP3 9341 NM_011067 - 13762 149888389 18628 Per3 0 ctacctaccttgcctggttcctt acgtgcctaacgttccagaataa 7 13 3 1.1.2.3.3.13 BCBC-5A-0 14094996 P103401 Tmem131 ProximalPromoter P103401 ProximalPromoter Unique Tile chr1:36834286-36835316 (-) NM_018872 - 49447 36883733 56030 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 MGI:1927110 Mm.186943 1 1 B|1 19.0 cM TMEM131 23505 0 cttggtcacttgggactctctgt ttccacctaagcgatcatagagg 7 13 4 1.1.2.3.4.13 BCBC-5A-0 14095015 P106651 Cry1 DistalPromoter P106651 DistalPromoter Unique Tile chr10:84615736-84617580 (-) NM_007771 - 883 84614853 12952 Cry1 AU020726|AU021000|Phll1 cryptochrome 1 (photolyase-like) MGI:1270841 Mm.26237 10 10 C|10 46.0 cM CRY1 1407 0 gcagggattgattgtgtcagttc ggaagtctgggcactttcttgat 7 13 5 1.1.2.3.5.13 BCBC-5A-0 14095034 P104787 Sub1 DistalPromoter P104787 DistalPromoter Unique Tile chr15:11942313-11944437 (-) NM_011294 - 1583 11940730 20024 Sub1 AI842364|P15|P9|Pc4|Rpo2tc1 SUB1 homolog (S. cerevisia MGI:104811 Mm.41746 15 15 A2 SUB1 10923 0 ctaccaccctgactttgccttct gaataaaccctttcctccccaac 7 13 6 1.1.2.3.6.13 BCBC-5A-0 14095053 P107393 Nudc DistalPromoter P107393 DistalPromoter Unique Tile chr4:132819393-132821541 (-) NM_010948 - 1355 132818038 18221 Nudc SIG-92|Silg92 nuclear distribution gene C homolog (Aspergillus) MGI:106014 Mm.69 4 4 D3 NUDC 10726 NM_011850 + 3924 132825465 23957 Nr0b2 0 aacagtggtggcagacaccttta aggacagccagggctatacagag 7 13 7 1.1.2.3.7.13 BCBC-5A-0 14095072 P106258 2610040C18Rik DistalPromoter P106258 DistalPromoter Unique Tile chr4:148011351-148013406 (-) NM_027263 - 30001 147981350 69928 2610040C18Rik 2810407L01Rik RIKEN cDNA 2610040C18 gene MGI:1917178 Mm.260893 4 4 E2 NM_007745 - 40810 147970541 12854 Cort 0 aactccagcaccttctggttttc tccattcagactcaggtgttggt 7 13 8 1.1.2.3.8.13 BCBC-5A-0 14095091 P000841 Blank P000841 Buffer Control Negative Blank 7 13 9 1.1.2.3.9.13 BCBC-5A-0 14095110 P206006 Arih2 ProximalPromoter P206006 ProximalPromoter Unique Tile chr9:108511221-108512263 (-) NM_011790 - 4436 108506785 23807 Arih2 AI843547|ARI2|TRIAD1|UIP48 ariadne homolog 2 (Drosophila) MGI:1344361 Mm.290447 9 9 F2 ARIH2 10425 NM_020520 + 7238 108519501 57279 Slc25a20 0 cagtcagttgctgttttgtttgg atccagataaggatctccaagcc 7 13 10 1.1.2.3.10.13 BCBC-5A-0 14095129 P201996 Sh3tc2 ProximalPromoter P201996 ProximalPromoter Unique Tile chr18:62077654-62078582 (+) NM_172628 + 139 62078443 225608 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 MGI:2444417 Mm.262320 18 18 E1 NM_198649 - 40462 62037192 319713 Ablim3 0 ctccctcctgtaaaccatctcct agcactcttgcctgagtcctaga 7 13 11 1.1.2.3.11.13 BCBC-5A-0 14095148 P204211 Cbx3 ProximalPromoter P204211 ProximalPromoter Unique Tile chr6:51399297-51400339 (+) NM_007624 + 44 51400295 12417 Cbx3 HP1g|M32|MGC118084 chromobox homolog 3 (Drosophila HP1 gamma) MGI:108515 Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845; Mm.280968; Mm.371551; Mm.421364; Mm.422845 6 6 B-C|6 26.0 cM CBX3 11335 NM_016806;NM_182650; - 180 51399477 53379 Hnrpa2b1 2 gagcgagatgagaaagacctcc aaagcaaaggcacgaacttcac 7 13 12 1.1.2.3.12.13 BCBC-5A-0 14095167 P204954 St6gal1 ProximalPromoter P204954 ProximalPromoter Unique Tile chr16:23204885-23205815 (+) NM_145933 + 30597 23236412 20440 St6gal1 AW742324|Cd75|MGC116663|ST6Gal|ST6Gal I|Siat1|St6Gal-I beta galactoside alpha 2,6 sialyltransferase 1 MGI:108470 Mm.149029 16 16 B1|16 15.5 cM ST6GAL1 6480 0 tgctctcttctgattgacgtctg tggagtaagggattagccaatga 7 13 13 1.1.2.3.13.13 BCBC-5A-0 14095186 P205125 Zscan2 ProximalPromoter P205125 ProximalPromoter Unique Tile chr7:80733473-80734385 (+) NM_009553 + 1235 80735620 22691 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 MGI:99176 Mm.358645 7 7 D3|7 42.0 cM ZSCAN2 54993 NM_026523 - 44125 80778510 68039 Nmb 0 atctgttatcctctccctgtccc gctccactattggtgaaaactgc 7 13 14 1.1.2.3.14.13 BCBC-5A-0 14095205 P206765 Ncoa4 ProximalPromoter P206765 ProximalPromoter Unique Tile chr14:30993867-30994911 (+) NM_019744;NM_001033988; + 111 30994800 27057 Ncoa4 4432406M01Rik|AI227008|MGC103382|Rfg nuclear receptor coactivator 4 MGI:1350932 Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717; Mm.275762; Mm.371598; Mm.390717 14 14 B NCOA4 8031 NM_020597 + 22804 30971063 17695 Msmb 1 tcctgactgttgagattacgggt tctaggagcggctaatgaaattg 7 13 15 1.1.2.3.15.13 BCBC-5A-0 14095224 P200609 Mdm4 ProximalPromoter P200609 ProximalPromoter Unique Tile chr1:134853157-134854110 (-) NM_008575 - 255 134852902 17248 Mdm4 4933417N07Rik|AA414968|AL023055|AU018793|AU021806|C85810|Mdmx transformed mouse 3T3 cell double minute 4 MGI:107934 Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531; Mm.18706; Mm.426531 1 1 G-G|1 70.0 cM MDM4 4194 0 aaggatcaggaagggttagcttg gagtgctgagatttaaggcttgc 7 13 16 1.1.2.3.16.13 BCBC-5A-0 14095243 P210211 Lars2 ProximalPromoter P210211 ProximalPromoter Unique Tile chr9:123214573-123215478 (+) NM_153168 + 159 123215637 102436 Lars2 AI035546|Kiaa0028|LEURS leucyl-tRNA synthetase, mitochondrial MGI:2142973 Mm.276076 9 9 F|9 70.6 cM LARS2 23395 0 cagtgcagtggaaacctagtgtg caaattctgcttaccggattgtc 7 13 17 1.1.2.3.17.13 BCBC-5A-0 14095262 P207179 Ddr2 ProximalPromoter P207179 ProximalPromoter Unique Tile chr1:171947562-171948527 (-) NM_022563 - 328 171947234 18214 Ddr2 AW495251|Ntrkr3|tyro10 discoidin domain receptor family, member 2 MGI:1345277 Mm.229249; Mm.4999; Mm.229249; Mm.4999; Mm.229249; Mm.4999; Mm.229249; Mm.4999; Mm.229249; Mm.4999; Mm.229249; Mm.4999; Mm.229249; Mm.4999; Mm.229249; Mm.4999; Mm.229249; Mm.4999 1 1 H1-H5|1 90.0 cM DDR2 4921 0 tgaggaggctagctctcaaaaga agaaggcaagtcaccaatcagag 7 13 18 1.1.2.3.18.13 BCBC-5A-0 14095281 P001764 Blank P001764 Buffer Control Negative Blank 7 13 19 1.1.2.3.19.13 BCBC-5A-0 14094940 P100702 Cckar ProximalPromoter P100702 ProximalPromoter Unique Tile chr5:53996502-53997556 (-) NM_009827 - 152 53996350 12425 Cckar AW106902 cholecystokinin A receptor MGI:99478 Mm.3521 5 5 C1|5 34.0 cM CCKAR 886 0 cttcccccgaacctttatcag gcacttttcaagcattccagg 7 14 1 1.1.2.3.1.14 BCBC-5A-0 14094959 P101824 Mef2c ProximalPromoter P101824 ProximalPromoter Unique Tile chr13:83980384-83981397 (+) NM_025282 + 134 83981531 17260 Mef2c 5430401D19Rik|9930028G15Rik|AV011172 myocyte enhancer factor 2C MGI:99458 Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864; Mm.24001; Mm.392364; Mm.398864 13 13 C3|13 45.0 cM MEF2C 4208 0 ttccctggatactgggtgatg tgctggcaaaagaacacagaa 7 14 2 1.1.2.3.2.14 BCBC-5A-0 14094978 P102675 Adam15 ProximalPromoter P102675 ProximalPromoter Unique Tile chr3:89436157-89437138 (-) NM_001037722;NM_009614; - 220 89435937 11490 Adam15 MDC15|metargidin a disintegrin and metallopeptidase domain 15 (metargidin) MGI:1333882 Mm.274049 3 3 F1|3 44.4 cM ADAM15 8751 NM_007910 - 12202 89423955 13639 Efna4 0 tttttcgagacagggtttctctg actttattaagcaagaaggcggg 7 14 3 1.1.2.3.3.14 BCBC-5A-0 14094997 P103425 Refbp2 ProximalPromoter P103425 ProximalPromoter Unique Tile chr1:173339036-173340126 (+) NM_019484 + 26 173340152 56009 Refbp2 C130042O11Rik|MGC117570|REF2 RNA and export factor binding protein 2 MGI:1913144 Mm.389208 1 1 H3 NM_010584 - 31842 173371968 16429 Itlna 0 aaaggtcttgggtgggagagtag gagacatctgggacaaattcgag 7 14 4 1.1.2.3.4.14 BCBC-5A-0 14095016 P106672 Dlgh1 DistalPromoter P106672 DistalPromoter Unique Tile chr16:31581277-31583396 (+) NM_007862 + 207 31583189 13383 Dlgh1 B130052P05Rik|KIAA4187|SAP97|mKIAA4187 discs, large homolog 1 (Drosophila) MGI:107231 Mm.382 16 16 B2|16 21.2 cM DLG1 1739 0 ggattaagatgccattgaggacc ctggggacaaaggagttgacac 7 14 5 1.1.2.3.5.14 BCBC-5A-0 14095035 P104721 Ndst2 DistalPromoter P104721 DistalPromoter Unique Tile chr14:19519857-19521850 (-) NM_010811 - 978 19518879 17423 Ndst2 MGC124373|MGC124374|Mndns|NDST-2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 MGI:97040 Mm.4084 14 14 B NDST2 8509 NM_025366 + 28237 19491620 66121 Chchd1 0 gaaaagtattgttggggctggag tgggaagctttcctctccaatac 7 14 6 1.1.2.3.6.14 BCBC-5A-0 14095054 P107415 Pcsk1n DistalPromoter P107415 DistalPromoter Unique Tile chrX:7073447-7075489 (+) NM_013892 + 1291 7076780 30052 Pcsk1n AI848336|MGC19107|Pan3|SAAS|proSAAS proprotein convertase subtilisin/kexin type 1 inhibitor MGI:1353431 Mm.4881 X X A1.1 PCSK1N 27344 NM_181548 - 10077 7085566 353283 Eras 0 gtatcatctgaggcacaaccagg cagaggcaggagggtcataagtt 7 14 7 1.1.2.3.7.14 BCBC-5A-0 14095073 P106279 Rpl11 DistalPromoter P106279 DistalPromoter Unique Tile chr4:135326001-135328126 (-) NM_025919 - 554 135325447 67025 Rpl11 2010203J19Rik ribosomal protein L11 MGI:1914275 Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622; Mm.276856; Mm.371622 4 4 D3 RPL11 6135 NM_013736 - 32276 135293725 27224 Tceb3 2 tcagatccctccatatccactca agttccaggacagccaaggttag 7 14 8 1.1.2.3.8.14 BCBC-5A-0 14095092 P000937 Blank P000937 Buffer Control Negative Blank 7 14 9 1.1.2.3.9.14 BCBC-5A-0 14095111 P203108 D5Ertd577e ProximalPromoter P203108 ProximalPromoter Unique Tile chr5:95695964-95696956 (+) NM_177187 + 151 95697107 320549 D5Ertd577e E330023J07Rik|MGC107406 DNA segment, Chr 5, ERATO Doi 577, expressed MGI:1261918 Mm.348793 5 5 E3|5 52.0 cM 0 aagaacacagatgccccttaaca aaaaacctgagcctcctaattgc 7 14 10 1.1.2.3.10.14 BCBC-5A-0 14095130 P202021 Ubxd5 ProximalPromoter P202021 ProximalPromoter Unique Tile chr4:133373745-133374647 (+) NM_026257 + 31 133374678 67586 Ubxd5 4930506L07Rik|D4Bwg1540e|Soc|Soci UBX domain containing 5 MGI:1914836 Mm.282029 4 4 D3|4 65.7 cM UBXD5 91544 NM_013706 - 6607 133367138 23833 Cd52 0 ttcgaattcagagatcctcttgc ttctcattggctaattccgagag 7 14 11 1.1.2.3.11.14 BCBC-5A-0 14095149 P204235 Cdh8 ProximalPromoter P204235 ProximalPromoter Unique Tile chr8:102305486-102306538 (-) NM_007667;NM_001039154; - 19 102305505 12564 Cdh8 AI851472 cadherin 8 MGI:107434 Mm.220765 8 8 D1|8 46.5 cM CDH8 1006 NM_175479 + 296 102305782 234624 A330008L17Rik 1 aaagagacctgggtctatgggtc ggtagggagattccaaatccatc 7 14 12 1.1.2.3.12.14 BCBC-5A-0 14095168 P204978 Sstr1 ProximalPromoter P204978 ProximalPromoter Unique Tile chr12:59128791-59129890 (+) NM_009216 + 75 59129815 20605 Sstr1 Smstr-1|Smstr1|sst1 somatostatin receptor 1 MGI:98327 Mm.278336 12 12 C1|12 23.0 cM SSTR1 6751 0 gatgtgagagggagactgaggaa ctttcctgcttgccagttcttta 7 14 13 1.1.2.3.13.14 BCBC-5A-0 14095187 P205056 Tjp1 ProximalPromoter P205056 ProximalPromoter Unique Tile chr7:65249938-65250851 (-) NM_009386 - 251 65250189 21872 Tjp1 ZO-1|ZO1 tight junction protein 1 MGI:98759 Mm.4342 7 7 C|7 28.5 cM TJP1 7082 1 cgtgtccttacatccttttctgg gggattcaagtgggacaaaagtc 7 14 14 1.1.2.3.14.14 BCBC-5A-0 14095206 P206789 Pldn ProximalPromoter P206789 ProximalPromoter Unique Tile chr2:122429162-122430082 (+) NM_019788 + 108 122429974 18457 Pldn Stx13bp1|pa pallidin MGI:1927580 Mm.268921; Mm.405705; Mm.268921; Mm.405705; Mm.268921; Mm.405705; Mm.268921; Mm.405705; Mm.268921; Mm.405705; Mm.268921; Mm.405705; Mm.268921; Mm.405705; Mm.268921; Mm.405705; Mm.268921; Mm.405705; Mm.268921; Mm.405705; Mm.268921; Mm.405705; Mm.268921; Mm.405705 2 2 E5|2 67.6 cM PLDN 26258 NM_021507 + 26779 122456861 59010 Sqrdl 0 tgttaccttgggtccttggagta gtggctcaggaacactcatatcc 7 14 15 1.1.2.3.15.14 BCBC-5A-0 14095225 P200635 Dnm1l ProximalPromoter P200635 ProximalPromoter Unique Tile chr16:16272396-16273324 (-) NM_152816;NM_001025947; - 62 16272458 74006 Dnm1l 6330417M19Rik|AI450666|Drp1|MGC90593 dynamin 1-like MGI:1921256 Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868; Mm.218820; Mm.397868 16 16 A2 DNM1L 10059 1 tctgccttcatttctgcattgta gttgaagacgtcctgcagcttat 7 14 16 1.1.2.3.16.14 BCBC-5A-0 14095244 P210235 A330102K23Rik ProximalPromoter P210235 ProximalPromoter Unique Tile chr2:65645616-65646565 (+) NM_153409 + 115 65646680 77771 A330102K23Rik taip-2 RIKEN cDNA A330102K23 gene MGI:1925021 Mm.102025 2 2 C1.3 TAIP-2 80034 0 agggtctgttgttgttcattcgt cacctcgagcttttagaggacaa 7 14 17 1.1.2.3.17.14 BCBC-5A-0 14095263 P209330 Asl ProximalPromoter P209330 ProximalPromoter Unique Tile chr5:130309088-130310040 (-) NM_133768 - 40 130309048 109900 Asl 2510006M18Rik argininosuccinate lyase MGI:88084 Mm.23869 5 5 G1.3|5 74.0 cM ASL 435 NM_007761 + 3968 130314008 12909 Crcp 0 aggcagggcctctcttatatttg agaggtgggtgtgactcatcaat 7 14 18 1.1.2.3.18.14 BCBC-5A-0 14095282 P001860 Blank P001860 Buffer Control Negative Blank 7 14 19 1.1.2.3.19.14 BCBC-5A-0 14094941 P100726 Cldn3 ProximalPromoter P100726 ProximalPromoter Unique Tile chr5:135269768-135270865 (+) NM_009902 + 25 135270840 12739 Cldn3 AI182374|Cpetr2 claudin 3 MGI:1329044 Mm.158662 5 5 G2|5 75.0 cM CLDN3 1365 NM_145215 + 23060 135293925 68758 Abhd11 0 catctggctttgaattctccg gctttggagactggcttctga 7 15 1 1.1.2.3.1.15 BCBC-5A-0 14094960 P101848 Josd2 ProximalPromoter P101848 ProximalPromoter Unique Tile chr7:44335179-44336151 (+) NM_025368 + 41 44336192 66124 Josd2 1110007C05Rik Josephin domain containing 2 MGI:1913374 Mm.358691 7 7 B2 JOSD2 126119 NM_026690 + 1669 44333510 68352 0610012D14Rik 0 tacactccgggtggactgact aggcgaaagggactacagctc 7 15 2 1.1.2.3.2.15 BCBC-5A-0 14094979 P102609 Tcf1 ProximalPromoter P102609 ProximalPromoter Unique Tile chr5:115231975-115232936 (-) NM_009327 - 62 115232037 21405 Tcf1 AI323641|HNF1|HNF1-alpha|HNF1[a]|Hnf-1|Hnf1alpha|Tcf-1 transcription factor 1 MGI:98504 Mm.332607 5 5 F|5 65.0 cM TCF1 6927 NM_028211 + 28775 115203200 72357 2210016L21Rik 0 gctgtggtacgggtctgtaattc atcccactagtcaagctctgtgg 7 15 3 1.1.2.3.3.15 BCBC-5A-0 14094998 P103449 Rpl21 ProximalPromoter P103449 ProximalPromoter Unique Tile chr5:147143137-147144066 (+) NM_019647 + 463 147144529 19933 Rpl21 8430440E03Rik|L21|MGC107026|MGC107587|MGC107588|MGC107690|MGC117917 ribosomal protein L21 MGI:1278340 Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243; Mm.316592; Mm.371575; Mm.389243 5 5 G3 RPL21 6144 NM_026864 + 10527 147154593 68895 Rasl11a 0 gcctggaaactcaggagacacta atcgtgtattcccacaaaccaac 7 15 4 1.1.2.3.4.15 BCBC-5A-0 14095017 P106693 F10 DistalPromoter P106693 DistalPromoter Unique Tile chr8:13035033-13036841 (+) NM_007972 + 443 13037284 14058 F10 Cf10|fX coagulation factor X MGI:103107 Mm.262589 8 8 A1.1|8 7.0 cM F10 2159 NM_010172 + 9007 13026026 14068 F7 0 acccccaaaatcacagagaacat actccctaactttggcctgtgag 7 15 5 1.1.2.3.5.15 BCBC-5A-0 14095036 P104745 Pdcd6ip DistalPromoter P104745 DistalPromoter Unique Tile chr9:113558272-113560366 (-) NM_011052 - 1373 113556899 18571 Pdcd6ip AI480591|AIP1|AW544830|Alix|C76364|Eig2|mKIAA1375 programmed cell death 6 interacting protein MGI:1333753 Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728; Mm.29816; Mm.392728 9 9 F2 PDCD6IP 10015 0 ctccctgccaaactacctgatct tcaccactcttgatggagcaaat 7 15 6 1.1.2.3.6.15 BCBC-5A-0 14095055 P107515 Tcfap2a DistalPromoter P107515 DistalPromoter Unique Tile chr13:40746314-40748498 (-) NM_011547 - 420 40745894 21418 Tcfap2a AP-2|Ap2|Ap2tf transcription factor AP-2, alpha MGI:104671 Mm.85544 13 13 A5-B1|13 25.0 cM TFAP2A 7020 1 ctctcaatcggcttcctagggta tttctttcttctttccttccccc 7 15 7 1.1.2.3.7.15 BCBC-5A-0 14095074 P106301 Nanp DistalPromoter P106301 DistalPromoter Unique Tile chr2:150731600-150733708 (-) NM_026086 - 780 150730820 67311 Nanp 1600031M04Rik|Hdhd4|MGC103377 N-acetylneuraminic acid phosphatase MGI:1914561 Mm.120911 2 2 H1 NANP 140838 NM_207204 - 30827 150700773 78177 4930519N13Rik 0 ctgactgtgctgggactgaagat acaaggtttgccttctgttggtt 7 15 8 1.1.2.3.8.15 BCBC-5A-0 14095093 P001033 Blank P001033 Buffer Control Negative Blank 7 15 9 1.1.2.3.9.15 BCBC-5A-0 14095112 P203132 Zmynd19 ProximalPromoter P203132 ProximalPromoter Unique Tile chr2:24770517-24771515 (+) NM_026021 + 295 24771810 67187 Zmynd19 2700064H14Rik|AA536891|AU014915|mizip zinc finger, MYND domain containing 19 MGI:1914437 Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712; Mm.296106; Mm.394712 2 2 A3 ZMYND19 116225 NM_026044 + 12916 24784431 67228 Wdr85 2 catacatgcaggccaaacactaa gtcgcagcttcttcctgagacta 7 15 10 1.1.2.3.10.15 BCBC-5A-0 14095131 P201954 Ubxd3 ProximalPromoter P201954 ProximalPromoter Unique Tile chr4:138009169-138010256 (-) NM_178671 - 74 138009243 212190 Ubxd3 5730509E04Rik|A830047D02 UBX domain containing 3 MGI:2443123 Mm.292226 4 4 D3 UBXD3 127733 NM_008868 + 11347 137997822 18781 Pla2g2c 0 ctgaagtttctcaggagagcagg aaggcactgtgcttacctttcag 7 15 11 1.1.2.3.11.15 BCBC-5A-0 14095150 P204260 Cmah ProximalPromoter P204260 ProximalPromoter Unique Tile chr13:24421329-24422323 (+) NM_007717 + 263 24422586 12763 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase MGI:103227 Mm.8396 13 13 A3.2 CMAH 8418 1 aatctcgtgtgtgtgtgtgtgtg ctctctctttgtctgatggggaa 7 15 12 1.1.2.3.12.15 BCBC-5A-0 14095169 P205002 Spn ProximalPromoter P205002 ProximalPromoter Unique Tile chr7:126928798-126929701 (-) NM_009259;NM_001037810; - 167 126928965 20737 Spn A630014B01Rik|Cd43|Galgp|Ly-48|Ly48 sialophorin MGI:98384 Mm.283714 7 7 F3-F4|7 62.0 cM SPN 6693 NM_133686 - 15621 126913177 67375 Qprt 0 ccacatacctctgcttcctgagt taccccctcaccctattcatctt 7 15 13 1.1.2.3.13.15 BCBC-5A-0 14095188 P205080 Tnfsf10 ProximalPromoter P205080 ProximalPromoter Unique Tile chr3:27507120-27508139 (+) NM_009425 + 10 27508149 22035 Tnfsf10 A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Trail tumor necrosis factor (ligand) superfamily, member 10 MGI:107414 Mm.1062 3 3 A3 TNFSF10 8743 0 gaggcctcagagtcacaaacatt gtgcccatgcagtttctttttac 7 15 14 1.1.2.3.14.15 BCBC-5A-0 14095207 P206219 Ninj1 ProximalPromoter P206219 ProximalPromoter Unique Tile chr13:49198566-49199534 (+) NM_013610 + 51 49199483 18081 Ninj1 AU024536 ninjurin 1 MGI:1196617 Mm.18503 13 13 A5 NINJ1 4814 NM_026738 - 28429 49227963 68480 1110007C09Rik 2 cacagcaactggcttttactcct ccgttgagctcatactcctcagt 7 15 15 1.1.2.3.15.15 BCBC-5A-0 14095226 P200659 Scamp4 ProximalPromoter P200659 ProximalPromoter Unique Tile chr10:80004783-80005792 (+) NM_019575 + 218 80006010 56214 Scamp4 2410022D05Rik|A430024H01Rik|AI448940|AU022392|Sc4 secretory carrier membrane protein 4 MGI:1928947 Mm.273170 10 10 C1 SCAMP4 113178 NM_145421 - 11350 79993433 216169 D10Bwg1364e 1 agggtttctctgtatagccctgg tgaggcagaaggagactctatgg 7 15 16 1.1.2.3.16.15 BCBC-5A-0 14095245 P210259 B830045N13Rik ProximalPromoter P210259 ProximalPromoter Unique Tile chr1:148259101-148260024 (+) NM_153539 + 85 148259939 215378 B830045N13Rik MGC107461|MGC40674 RIKEN cDNA B830045N13 gene MGI:2443035 Mm.337647 1 1 F-G1|1 80.0 cM FAM5C 339479 0 aaatgtaattgcctccgtcttca tctctcctgtcaatttccctcac 7 15 17 1.1.2.3.17.15 BCBC-5A-0 14095264 P209354 Lbr ProximalPromoter P209354 ProximalPromoter Unique Tile chr1:183679104-183680149 (-) NM_133815 - 68 183679036 98386 Lbr AI505894|ic lamin B receptor MGI:2138281 Mm.4538 1 1 H5|1 97.3 cM LBR 3930 NM_001007587 - 9715 183689864 433384 LOC433384 1 tttatcatctgagctggctctcc gtccctcgaccttttgaatcatc 7 15 18 1.1.2.3.18.15 BCBC-5A-0 14095283 P001584 Blank P001584 Buffer Control Negative Blank 7 15 19 1.1.2.3.19.15 BCBC-5A-0 14094942 P100750 ProximalPromoter P100750 ProximalPromoter No Hits Tile 0 agtcggtcacagaaatcgctc taagagacaggcaaccggaaa 7 16 1 1.1.2.3.1.16 BCBC-5A-0 14094961 P101872 1810009K13Rik ProximalPromoter P101872 ProximalPromoter Unique Tile chr16:20523832-20524772 (+) NM_025462 + 371 20525143 66275 1810009K13Rik MGC144385|MGC144386 RIKEN cDNA 1810009K13 gene MGI:1913525 Mm.306234 16 16 B1 MGC2408 84291 NM_145939 - 455 20524287 208624 Alg3 0 agcagcagcaacagcacatta aggagctttcccctctacgtg 7 16 2 1.1.2.3.2.16 BCBC-5A-0 14094980 P102633 Tpm2 ProximalPromoter P102633 ProximalPromoter Unique Tile chr4:43544790-43545856 (-) NM_009416 - 238 43544552 22004 Tpm2 Tpm-2|Trop-2 tropomyosin 2, beta MGI:98810 Mm.646 4 4 B1 TPM2 7169 NM_139305 + 16684 43528106 230099 Car9 0 accgtgggtccagttagtagaca gctgtaaaaaccttggtcagcag 7 16 3 1.1.2.3.3.16 BCBC-5A-0 14094999 P103755 Tmem54 ProximalPromoter P103755 ProximalPromoter Unique Tile chr4:128606525-128607488 (+) NM_025452 + 416 128607904 66260 Tmem54 1810017F10Rik|AI507302 transmembrane protein 54 MGI:1913510 Mm.25295 4 4 D2.2 TMEM54 113452 NM_010471 - 13574 128621062 15444 Hpca 0 cacacaggaggtgtcactacagg ctggtctcagtcaggtcttccat 7 16 4 1.1.2.3.4.16 BCBC-5A-0 14095018 P106715 Fzd8 DistalPromoter P106715 DistalPromoter Unique Tile chr18:9209895-9211876 (+) NM_008058 + 1041 9212917 14370 Fzd8 Fz8|mFZ8 frizzled homolog 8 (Drosophila) MGI:108460 Mm.184289 18 18 A1|18 2.0 cM FZD8 8325 0 agcttttggaaagttggatcgtc cctgggctctaggtcagtgtttt 7 16 5 1.1.2.3.5.16 BCBC-5A-0 14095037 P104769 Ptpn11 DistalPromoter P104769 DistalPromoter Unique Tile chr5:121453144-121454986 (-) NM_011202 - 1152 121451992 19247 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 MGI:99511 Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681; Mm.400440; Mm.8681 5 5 F PTPN11 5781 NM_011290 + 10161 121465147 19988 Rpl6 0 tcaggagtctgatgaaggtggag ccgggattagcaatcctaacaag 7 16 6 1.1.2.3.6.16 BCBC-5A-0 14095056 P107537 Ube1c DistalPromoter P107537 DistalPromoter Unique Tile chr6:97172236-97174308 (-) NM_011666 - 1225 97171011 22200 Ube1c AI256736|AI848246|AW546539|UBA3 ubiquitin-activating enzyme E1C MGI:1341217 Mm.277626 6 6 D3 UBE1C 9039 NM_022992 + 1958 97176266 65106 Arl6ip5 0 aaacacctgctgctgttgatctc aggtggtttgtggacacactgtt 7 16 7 1.1.2.3.7.16 BCBC-5A-0 14095075 P106244 Ndufb3 DistalPromoter P106244 DistalPromoter Unique Tile chr1:58527941-58529928 (+) NM_025597 + 1216 58531144 66495 Ndufb3 2700033I16Rik|AI415450 NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 MGI:1913745 Mm.2033 1 1 C1.3 NDUFB3 4709 NM_172513 - 859 58530787 213056 BC049806 1 atgcccatctggcatatatgttg taaattggtagacaactcgcccc 7 16 8 1.1.2.3.8.16 BCBC-5A-0 14095094 P001129 Blank P001129 Buffer Control Negative Blank 7 16 9 1.1.2.3.9.16 BCBC-5A-0 14095113 P203156 6720467C03Rik ProximalPromoter P203156 ProximalPromoter Unique Tile chr4:12099368-12100267 (-) NM_026558 - 224 12099144 68099 6720467C03Rik - RIKEN cDNA 6720467C03 gene MGI:1915349 Mm.25340 4 4 A2 FAM92A1 137392 NM_028226 + 31905 12067463 72397 Rbm12b 0 tttgctcagcaccatagcattta tctttggctgacatatcccaagt 7 16 10 1.1.2.3.10.16 BCBC-5A-0 14095132 P201978 ProximalPromoter P201978 ProximalPromoter Unique Tile chr14:120382715-120383647 (+) 0 taatgagttccagagcccaatgt gctacagtctgttccttgcgttt 7 16 11 1.1.2.3.11.16 BCBC-5A-0 14095151 P202626 Nlk ProximalPromoter P202626 ProximalPromoter Unique Tile chr11:78512845-78513939 (-) NM_008702 - 140 78512705 18099 Nlk AI194375 nemo like kinase MGI:1201387 Mm.9001 11 11 B5 NLK 51701 2 agaggagagaggcgaaagaaaaa gcacacgaaaaggatctggtaac 7 16 12 1.1.2.3.12.16 BCBC-5A-0 14095170 P205026 Tac1 ProximalPromoter P205026 ProximalPromoter End Repeat Tile chr6:7504038-7504975 (+) NM_009311 + 95 7505070 21333 Tac1 4930528L02Rik|MGC151458|NK-1|NK1|Nkna|PPT-A|SP tachykinin 1 MGI:98474 Mm.1440; Mm.410823; Mm.1440; Mm.410823; Mm.1440; Mm.410823; Mm.1440; Mm.410823; Mm.1440; Mm.410823; Mm.1440; Mm.410823 6 6 A1|6 5.0 cM TAC1 6863 1 cacacacacacacacacacacac ctcaatatttaattagccgcccc 7 16 13 1.1.2.3.13.16 BCBC-5A-0 14095189 P205105 Nrsn1 ProximalPromoter P205105 ProximalPromoter Unique Tile chr13:25261436-25262507 (-) NM_009513 - 14097 25275533 22360 Nrsn1 Neurensin-1|Neuro-p24|Vmp neurensin 1 MGI:894662 Mm.4766 13 13 A3.1 NRSN1 140767 0 ctagagtttccgctgtttccaga caaacccccacagttttctactg 7 16 14 1.1.2.3.14.16 BCBC-5A-0 14095208 P206244 Sema6b ProximalPromoter P206244 ProximalPromoter Duplication Tile chr17:55733883-55734979 (-) NM_013662 - 7725 55726158 20359 Sema6b MGC143995|MGC143996|Sema|Seman|VIb|semaZ sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B MGI:1202889 Mm.8029 17 17 D SEMA6B 10501 NM_029796 - 18644 55715239 76905 Lrg1 0 ctatcaggtcagctcctagaccg ggcactccatagatgttttctgg 7 16 15 1.1.2.3.15.16 BCBC-5A-0 14095227 P200591 H2afy3 ProximalPromoter P200591 ProximalPromoter Unique Tile chr15:62048961-62049933 (-) NM_026230 - 108 62049069 67552 H2afy3 4933432H23Rik H2A histone family, member Y3 MGI:1914802 Mm.4608 15 15 D1 2 cctaggcctggatctccatctat agcttggacattttcttcttccc 7 16 16 1.1.2.3.16.16 BCBC-5A-0 14095246 P210284 Spfh2 ProximalPromoter P210284 ProximalPromoter Unique Tile chr8:28488545-28489511 (+) NM_153592 + 258 28489769 244373 Spfh2 BC036333|C87251|MGC27952 SPFH domain family, member 2 MGI:2387215 Mm.277699 8 8 A2 SPFH2 11160 NM_001039077;NM_001039078;NM_054057; + 18959 28508470 114863 Prosc 0 gggtcccttagacaagctgtttt accaaggctctggtatcaccttc 7 16 17 1.1.2.3.17.16 BCBC-5A-0 14095265 P209378 Stx12 ProximalPromoter P209378 ProximalPromoter Unique Tile chr4:132156358-132157374 (-) NM_133887 - 152 132156510 100226 Stx12 AI850350|AU041521|Stx13 syntaxin 12 MGI:1931027 Mm.28237 4 4 D2.3|4 60.0 cM STX12 23673 NM_145553 - 37213 132194587 230789 BC008163 0 tcatctgttacaggaggagaggc tgtctggatgatgctgttgaagt 7 16 18 1.1.2.3.18.16 BCBC-5A-0 14095284 P001680 Blank P001680 Buffer Control Negative Blank 7 16 19 1.1.2.3.19.16 BCBC-5A-0 14094943 P101056 Try4 ProximalPromoter P101056 ProximalPromoter Unique Tile chr6:41230484-41231525 (+) NM_011646 + 350 41231875 22074 Try4 0910001B19Rik|Tc trypsin 4 MGI:102757 Mm.383263 6 6 B1 NM_001003405 - 12790 41244315 435889 1810049H19Rik 0 gttatggcggggatgagtaca ctgtggcagatatgcaggacc 7 17 1 1.1.2.3.1.17 BCBC-5A-0 14094962 P101896 2410022L05Rik ProximalPromoter P101896 ProximalPromoter Unique Tile chr8:13890689-13891501 (-) NM_025556 - 442 13890247 66423 2410022L05Rik 1700029I03Rik|AA409325|AI256813|C85432|MGC11316 RIKEN cDNA 2410022L05 gene MGI:1913673 Mm.29063 8 8 A1.1 C17orf79 55352 NM_025785 + 16281 13907782 66822 Fbxo25 0 atcatgcagtgggaagcaagt gtcaatctgcaaggaaccagg 7 17 2 1.1.2.3.2.17 BCBC-5A-0 14094981 P102657 Vil2 ProximalPromoter P102657 ProximalPromoter Unique Tile chr17:6632274-6633335 (-) NM_009510 - 116 6632390 22350 Vil2 AW146364|MGC107499|R75297|p81 villin 2 MGI:98931 Mm.277812 17 17 A1 VIL2 7430 0 cgggggaggacttttagagttag aacagggacaacttactggcttg 7 17 3 1.1.2.3.3.17 BCBC-5A-0 14095000 P103779 Tcf19 ProximalPromoter P103779 ProximalPromoter Unique Tile chr17:35125226-35126136 (-) NM_025674 - 419 35124807 106795 Tcf19 5730403J10Rik|AW495861 transcription factor 19 MGI:103180 Mm.11434 17 17 B1 TCF19 6941 NM_146248 + 2 35125228 240084 Cchcr1 0 tacttccctaaggcacacggtaa cgtctagactgggtgctaggtgt 7 17 4 1.1.2.3.4.17 BCBC-5A-0 14095019 P106659 Cyp19a1 DistalPromoter P106659 DistalPromoter Unique Tile chr9:53992514-53994533 (-) NM_007810 - 941 53991573 13075 Cyp19a1 Ar|ArKO|Cyp19|Int-5|Int5|MGC124251|MGC124252 cytochrome P450, family 19, subfamily a, polypeptide 1 MGI:88587 Mm.5199 9 9 A5.3|9 31.0 cM CYP19A1 1588 0 cagaggctttaactggggtgtct gaaaggaaaaatgatggagtggg 7 17 5 1.1.2.3.5.17 BCBC-5A-0 14095038 P104793 Dhrs3 DistalPromoter P104793 DistalPromoter Unique Tile chr4:144156581-144158775 (+) NM_011303 + 738 144159513 20148 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 MGI:1315215 Mm.14063 4 4 E1 DHRS3 9249 0 ccagtaccaagagagaaagggga ccaggtaggaccaggaggttatg 7 17 6 1.1.2.3.6.17 BCBC-5A-0 14095057 P107559 Ash2l DistalPromoter P107559 DistalPromoter Unique Tile chr8:27307525-27309637 (-) NM_011791 - 1211 27306314 23808 Ash2l - ash2 (absent, small, or homeotic)-like (Drosophila) MGI:1344416 Mm.27706 8 8 A3 ASH2L 9070 NM_008432 + 5563 27315200 16532 Kcnu1 0 ttagaggtcatagggccagaagc caagcagacagggagaacttcaa 7 17 7 1.1.2.3.7.17 BCBC-5A-0 14095076 P106265 Eif4e3 DistalPromoter P106265 DistalPromoter Unique Tile chr6:99633673-99635567 (-) NM_025829 - 1439 99632234 66892 Eif4e3 1300018P11Rik|AI451927|eIF4E-3 eukaryotic translation initiation factor 4E member 3 MGI:1914142 Mm.32889 6 6 D3 EIF4E3 317649 NM_008158 + 22574 99658141 14761 Gpr27 0 gaaagttgggctgatgggattac atggtctcaccttctcccaagac 7 17 8 1.1.2.3.8.17 BCBC-5A-0 14095095 P203011 Glt25d2 ProximalPromoter P203011 ProximalPromoter Unique Tile chr1:154161021-154161928 (+) NM_177756 + 210 154162138 269132 Glt25d2 AI427652|D730024P12 glycosyltransferase 25 domain containing 2 MGI:2138232 Mm.23782 1 1 G3 GLT25D2 23127 NM_025677 - 12121 154148900 66637 5730449L18Rik 0 ttccaacagttatggagaaggga ttcttcacagtgacgcgatgtat 7 17 9 1.1.2.3.9.17 BCBC-5A-0 14095114 P203180 Il18r1 ProximalPromoter P203180 ProximalPromoter Unique Tile chr1:40409283-40410214 (+) NM_008365 + 7 40410221 16182 Il18r1 Il18ralpha|Il1rrp interleukin 18 receptor 1 MGI:105383 Mm.253664 1 1 B IL18R1 8809 NM_001025602;NM_010743; + 24030 40385253 17082 Il1rl1 1 ggtggatctctgtgagtttgagg aacctgcagcctgtctactcaac 7 17 10 1.1.2.3.10.17 BCBC-5A-0 14095133 P202002 Amacr ProximalPromoter P202002 ProximalPromoter Unique Tile chr15:10925489-10926408 (+) NM_008537 + 72 10926480 17117 Amacr Macr1 alpha-methylacyl-CoA racemase MGI:1098273 Mm.2787 15 15 B1 AMACR 23600 NM_053077 + 19037 10945445 22293 Slc45a2 0 tcagccatacctttccatgagat cctagcattggatcagttggttt 7 17 11 1.1.2.3.11.17 BCBC-5A-0 14095152 P202650 Nupl2 ProximalPromoter P202650 ProximalPromoter Unique Tile chr5:23674047-23675001 (+) NM_153092 + 26 23675027 231042 Nupl2 AV116043|CG1|NLP-1|Nlp1 nucleoporin like 2 MGI:2387631 Mm.45513 5 5 A3 NUPL2 11097 0 ttcacagacatgctcaaaggtgt agccaatgggatttaagaagagc 7 17 12 1.1.2.3.12.17 BCBC-5A-0 14095171 P204960 Ptk6 ProximalPromoter P204960 ProximalPromoter Unique Tile chr2:181132189-181133168 (-) NM_009184 - 7 181132196 20459 Ptk6 BRK|Sik|Tksk|tks PTK6 protein tyrosine kinase 6 MGI:99683 Mm.4497 2 2 H4|2 110.0 cM PTK6 5753 NM_011481 - 9410 181142578 20811 Srms 0 acaggatcagccagaatgagaag tacatggaatacccccatgagac 7 17 13 1.1.2.3.13.17 BCBC-5A-0 14095190 P205131 Zfp92 ProximalPromoter P205131 ProximalPromoter Unique Tile chrX:69663025-69664014 (+) NM_009566 + 192 69663822 22754 Zfp92 - zinc finger protein 92 MGI:108094 Mm.5060 X X A7.3|X 29.24 cM ZFP92 29977 NM_011907 - 24014 69688028 24102 Trex2 0 caaggccaccttaagacagaaga cctacatcaggcaaaaccagaag 7 17 14 1.1.2.3.14.17 BCBC-5A-0 14095209 P206268 Krtap14 ProximalPromoter P206268 ProximalPromoter Unique Tile chr16:88714943-88716033 (-) NM_013707 - 34 88714977 23927 Krtap14 AA589630|MGC129168|MGC129169|Pmg1|mKAP13 keratin associated protein 14 MGI:1346079 Mm.3502 16 16 C3.3 NM_013713 + 1834 88717867 26560 Krtap15 0 aaatatgacccttgctttggaca ggacatgttgagaggagctagga 7 17 15 1.1.2.3.15.17 BCBC-5A-0 14095228 P200615 Rad51l3 ProximalPromoter P200615 ProximalPromoter End Repeat Tile chr11:82707052-82708117 (-) NM_011235 - 268 82706784 19364 Rad51l3 DKFZp586D0122|R51H3|Rad5113|Rad51d|Trad-d2|Trad-d3|Trad-d4|Trad-d6|Trad-d7 RAD51-like 3 (S. cerevisiae) MGI:1261809 Mm.9286 11 11 C|11 48.5 cM RAD51L3 5892 NM_145431 - 16440 82724557 217011 Nle1 1 tctctaggtcacgtttgtggtca acacacacacacacacacacaca 7 17 16 1.1.2.3.16.17 BCBC-5A-0 14095247 P210107 BC024814 ProximalPromoter P210107 ProximalPromoter Unique Tile chr16:8385306-8386308 (+) NM_146247 + 175 8386133 239706 BC024814 MGC38788 cDNA sequence BC024814 MGI:2384301 Mm.214953 16 16 A1 C16orf68 79091 NM_172961 + 42501 8428809 268860 Abat 0 tccaatttgaatcctcaccactt tcccatacagaaagggaaactga 7 17 17 1.1.2.3.17.17 BCBC-5A-0 14095266 P209402 Ptov1 ProximalPromoter P209402 ProximalPromoter Unique Tile chr7:44737870-44738945 (-) NM_133949 - 40 44737830 84113 Ptov1 1110030G05Rik|AU041779 prostate tumor over expressed gene 1 MGI:1933946 Mm.42855 7 7 B2 PTOV1 53635 NM_021549 + 12425 44725445 59047 Pnkp 1 ttaagtcagttgcccaatcaggt acaaacagggatggaggactgta 7 17 18 1.1.2.3.18.17 BCBC-5A-0 14095285 P001680 Blank P001680 Buffer Control Negative Blank 7 17 19 1.1.2.3.19.17 BCBC-5A-0 14094944 P101080 Ybx1 ProximalPromoter P101080 ProximalPromoter Unique Tile chr4:118792823-118793743 (-) NM_011732 - 401 118792422 22608 Ybx1 1700102N10Rik|C79409|EF1A|MGC118070|MSY1|Nsep1|YB-1|dbpB|mYB-1a Y box protein 1 MGI:99146 Mm.258204 4 4 D1 YBX1 4904 NM_028677 - 24666 118818409 66101 Ppih 0 caagtgctggaattaaaggcg tcaggcttttggtgatccagt 7 18 1 1.1.2.3.1.18 BCBC-5A-0 14094963 P101830 Synj2bp ProximalPromoter P101830 ProximalPromoter Unique Tile chr12:82451854-82452808 (-) NM_025292 - 99 82451755 24071 Synj2bp ARIP2|ARIP2a|ActRIP4|OMP25 synaptojanin 2 binding protein MGI:1344347 Mm.279603 12 - SYNJ2BP 55333 NM_020330 - 34514 82487322 56622 Adam21 2 atggtcaccttcctggtcctt gaggagccatgagcaaagaga 7 18 2 1.1.2.3.2.18 BCBC-5A-0 14094982 P102681 Akap1 ProximalPromoter P102681 ProximalPromoter Unique Tile chr11:88667730-88668760 (-) NM_009648;NM_001042541; - 137 88667593 11640 Akap1 AKAP121|AKAP84|Akap|C76494|C81186|S-AKAP84 A kinase (PRKA) anchor protein 1 MGI:104729 Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054; Mm.2969; Mm.427054 11 11 C AKAP1 8165 0 ccttctgtggtgaggtgagaact gactggcagacaagacagacaga 7 18 3 1.1.2.3.3.18 BCBC-5A-0 14095001 P103803 1700022L09Rik ProximalPromoter P103803 ProximalPromoter Unique Tile chr2:156698759-156699820 (-) NM_025853 - 243 156698516 66934 1700022L09Rik AW552447 RIKEN cDNA 1700022L09 gene MGI:1914184 Mm.25410 2 2 H1 C20orf172 79980 NM_013865 - 15288 156683471 29812 Ndrg3 0 agtgatctcagtgtgtcccaaca atggcttcccctctatctctttg 7 18 4 1.1.2.3.4.18 BCBC-5A-0 14095020 P106680 Arid3a DistalPromoter P106680 DistalPromoter Unique Tile chr10:79330702-79332541 (+) NM_007880 + 2274 79330267 13496 Arid3a Bright|Dri1 AT rich interactive domain 3A (Bright like) MGI:1328360 Mm.301282 10 10 C1 ARID3A 1820 NM_053244 + 9046 79321656 114229 Kiss1r 2 tagcgatctctcctaaaggtggc atgagtggcctcaacactcagtc 7 18 5 1.1.2.3.5.18 BCBC-5A-0 14095039 P107169 F2 DistalPromoter P107169 DistalPromoter Unique Tile chr2:91438776-91440611 (-) NM_010168 - 1523 91437253 14061 F2 Cf-2|Cf2|FII coagulation factor II MGI:88380 Mm.89048 2 2 E1|2 47.5 cM F2 2147 NM_001033451 - 10019 91450630 381410 Zfp408 2 catgacctgagcatttgccttac attaaaggcatgtgccatcattg 7 18 6 1.1.2.3.6.18 BCBC-5A-0 14095058 P105782 Aldh1a7 DistalPromoter P105782 DistalPromoter Unique Tile chr19:20795948-20797905 (-) NM_011921 - 1295 20794653 26358 Aldh1a7 AI987940|Ahd2-like|Aldh-pb|Aldh1a4|Aldhpb aldehyde dehydrogenase family 1, subfamily A7 MGI:1347050 Mm.14609 19 19 B|19 20.0 cM 2 ggcagactaggccatcttttgat tccagccctaccttggtattcat 7 18 7 1.1.2.3.7.18 BCBC-5A-0 14095077 P106287 Gatm DistalPromoter P106287 DistalPromoter Unique Tile chr2:122303983-122306146 (-) NM_025961 - 1283 122302700 67092 Gatm 1810003P21Rik|AI314789|AT glycine amidinotransferase (L-arginine:glycine amidinotransferase) MGI:1914342 Mm.29975 2 2 E5|2 69.0 cM GATM 2628 NM_001004174 + 23181 122329327 433470 AA467197 0 gaagaaaagggaaagggaggaaa agccagcatagtggttcagtcaa 7 18 8 1.1.2.3.8.18 BCBC-5A-0 14095096 P203035 Kera ProximalPromoter P203035 ProximalPromoter Unique Tile chr10:97035724-97036798 (+) NM_008438 + 98 97036896 16545 Kera CNA2|SLRR2B keratocan MGI:1202398 Mm.6228 10 10 C3|10 61.0 cM KERA 11081 NM_007884 + 36957 97073755 13516 Dspg3 1 agccattaccacgtgtgtctttt gaattgacccaatctttgctgtc 7 18 9 1.1.2.3.9.18 BCBC-5A-0 14095115 P203114 Zfp207 ProximalPromoter P203114 ProximalPromoter Unique Tile chr11:80198186-80199244 (+) NM_011751 + 288 80199532 22680 Zfp207 8430401D15Rik|Zep zinc finger protein 207 MGI:1340045 Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332; Mm.102253; Mm.401332 11 11 B5 ZNF207 7756 NM_027472 - 3992 80194194 70591 5730455P16Rik 1 gctcttaacagctgagccatctc gacatggtcaatttgggttttgt 7 18 10 1.1.2.3.10.18 BCBC-5A-0 14095134 P202027 Mpp1 ProximalPromoter P202027 ProximalPromoter Unique Tile chrX:71383629-71384694 (-) NM_008621 - 40 71383669 17524 Mpp1 55kDa|C130070C03Rik membrane protein, palmitoylated MGI:105941 Mm.391267 X X A7.3|X 30.48 cM MPP1 4354 NM_001033786 - 31777 71416471 434800 4930428E23Rik 0 ttcatcctttccagttccactgt cagagacgagctagactaaggcg 7 18 11 1.1.2.3.11.18 BCBC-5A-0 14095153 P202674 9230107O10Rik ProximalPromoter P202674 ProximalPromoter Unique Tile chr2:152167309-152168394 (+) NM_176950 + 109 152168503 319579 9230107O10Rik Defb20 RIKEN cDNA 9230107O10 gene MGI:2442320 Mm.190454 2 2 G3 NM_001037933 - 11276 152156033 629114 Defb23 0 gtcctgagttcaattcccacaac acgtttcccacctactccatttt 7 18 12 1.1.2.3.12.18 BCBC-5A-0 14095172 P204984 Snta1 ProximalPromoter P204984 ProximalPromoter Unique Tile chr2:154099751-154100721 (-) NM_009228 - 229 154099522 20648 Snta1 AW228934|Snt1 syntrophin, acidic 1 MGI:101772 Mm.1541 2 2 H1|2 84.0 cM SNTA1 6640 NM_172860 + 27237 154127958 12396 Cbfa2t2h 0 cagttatgcagggtttacccaag caacacaaggatccagttctgtg 7 18 13 1.1.2.3.13.18 BCBC-5A-0 14095191 P202915 Cbara1 ProximalPromoter P202915 ProximalPromoter Unique Tile chr10:59096634-59097653 (+) NM_144822 + 315 59097968 216001 Cbara1 C730016L05Rik|CALC|MGC29229|MGC36365|MGC36503|MGC36634 calcium binding atopy-related autoantigen 1 MGI:2384909 Mm.27199 10 10 B4 CBARA1 10367 2 gtgtgtgagtatgtgtgtggggt ctgtcaaagtccacctctcctgt 7 18 14 1.1.2.3.14.18 BCBC-5A-0 14095210 P206292 Tjp3 ProximalPromoter P206292 ProximalPromoter Unique Tile chr10:80694517-80695483 (-) NM_013769 - 154 80694363 27375 Tjp3 ZO-3 tight junction protein 3 MGI:1351650 Mm.27984 10 10 C1 TJP3 27134 NM_008844 + 625 80696108 18717 Pip5k1c 2 ccagcctagtctacgagatccaa acaccacagagtaggtgctcaca 7 18 15 1.1.2.3.15.18 BCBC-5A-0 14095229 P200641 Grap ProximalPromoter P200641 ProximalPromoter Unique Tile chr11:61468515-61469483 (+) NM_027817 + 32 61469515 71520 Grap 8430435N19Rik|BB233594 GRB2-related adaptor protein MGI:1918770 Mm.202760 11 11 B2 GRAP 10750 NM_178618 + 31172 61500655 69640 2310040C09Rik 0 tgtcacagccttcccttaacaat ggagaggaccacttcctttgttt 7 18 16 1.1.2.3.16.18 BCBC-5A-0 14095248 P210132 Slco4a1 ProximalPromoter P210132 ProximalPromoter Unique Tile chr2:180384563-180385546 (+) NM_148933 + 4839 180390385 108115 Slco4a1 MGC28799|MGC28824|OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 MGI:1351866 Mm.133687 2 2 H4 SLCO4A1 28231 NM_018766 + 43837 180429383 18216 Ntsr1 2 tggagagttggggaaggttattt agagcgggacttagctagtgctt 7 18 17 1.1.2.3.17.18 BCBC-5A-0 14095267 P209336 Gpr110 ProximalPromoter P209336 ProximalPromoter Unique Tile chr17:42734469-42735504 (+) NM_133776 + 94 42735598 77596 Gpr110 5031409J19Rik|KPG_009 G protein-coupled receptor 110 MGI:1924846 Mm.159950 17 17 B3 GPR110 266977 0 atggtttgtgtggtattgggaac agcttgtaaaacaggcagtccag 7 18 18 1.1.2.3.18.18 BCBC-5A-0 14095286 P001776 Cy3 Anchor P001776 Anchor Control Positive Cy3 Anchor 7 18 19 1.1.2.3.19.18 BCBC-5A-0 14094945 P101104 Mapk7 ProximalPromoter P101104 ProximalPromoter Unique Tile chr11:61310741-61311791 (-) NM_011841 - 338 61310403 23939 Mapk7 BMK1|ERK5|Erk5-T|PRKM7 mitogen activated protein kinase 7 MGI:1346347 Mm.38172 11 11 B2 MAPK7 5598 NM_029568 + 9095 61301646 76293 Mfap4 1 tgctgggaacagaggaacatt ttctgagcctactcgctccac 7 19 1 1.1.2.3.1.19 BCBC-5A-0 14094964 P101854 Ufc1 ProximalPromoter P101854 ProximalPromoter Unique Tile chr1:173132198-173133102 (-) NM_025388 - 541 173131657 66155 Ufc1 1110021H02Rik|AA062310|ESTM29 ubiquitin-fold modifier conjugating enzyme 1 MGI:1913405 Mm.2815 1 1 H3|1 93.0 cM UFC1 51506 NM_013919 - 7594 173124604 30941 Usp21 1 atggggatccaactccatttc actcacagatctgcctgcctc 7 19 2 1.1.2.3.2.19 BCBC-5A-0 14094983 P102987 Pex11a ProximalPromoter P102987 ProximalPromoter Unique Tile chr7:79616900-79617869 (-) NM_011068 - 362 79616538 18631 Pex11a PEX11alpha peroxisomal biogenesis factor 11a MGI:1338788 Mm.20615 7 7 D2 PEX11A 8800 NM_001037927 + 225 79616675 626359 LOC626359 2 aatagagaaaagtaggcgacccg taagtcagttcctggggtgtgtt 7 19 3 1.1.2.3.3.19 BCBC-5A-0 14095002 P103827 Tspan31 ProximalPromoter P103827 ProximalPromoter Unique Tile chr10:126473417-126474418 (-) NM_025982 - 207 126473210 67125 Tspan31 2700085A14Rik|AW742554|Sas tetraspanin 31 MGI:1914375 Mm.35650 10 10 D3 TSPAN31 6302 NM_009870 + 6854 126466563 12567 Cdk4 0 cttcattcctaccacagctgctt agaagaggaaggcgaaagaaaga 7 19 4 1.1.2.3.4.19 BCBC-5A-0 14095021 P106702 Fas DistalPromoter P106702 DistalPromoter Unique Tile chr19:34353321-34355448 (+) NM_007987 + 1214 34356662 14102 Fas AI196731|APO-1|APT1|CD95|TNFR6|Tnfrsf6|lpr Fas (TNF receptor superfamily member) MGI:95484 Mm.1626; Mm.392903; Mm.1626; Mm.392903; Mm.1626; Mm.392903; Mm.1626; Mm.392903; Mm.1626; Mm.392903; Mm.1626; Mm.392903; Mm.1626; Mm.392903; Mm.1626; Mm.392903; Mm.1626; Mm.392903; Mm.1626; Mm.392903; Mm.1626; Mm.392903 19 19 C1|19 23.0 cM FAS 355 NM_007392 - 31988 34321333 11475 Acta2 0 gtggaggtcagaagacacccttt atgccaacatctttggtactgga 7 19 5 1.1.2.3.5.19 BCBC-5A-0 14095040 P107191 Gabra1 DistalPromoter P107191 DistalPromoter Unique Tile chr11:42027043-42028978 (-) NM_010250 - 690 42026353 14394 Gabra1 Gabra-1 gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1 MGI:95613 Mm.338713 11 11 A5|11 19.0 cM GABRA1 2554 0 agccctcctgctgaaaactattg ctttaaaaccacatggggaggag 7 19 6 1.1.2.3.6.19 BCBC-5A-0 14095059 P107523 Tgfb1 DistalPromoter P107523 DistalPromoter Unique Tile chr7:25392425-25394560 (+) NM_011577 + 1201 25395761 21803 Tgfb1 TGF-beta1|Tgfb|Tgfb-1 transforming growth factor, beta 1 MGI:98725 Mm.248380 7 7 A3|7 6.5 cM TGFB1 7040 NM_172148 + 2508 25389917 232987 BC028440 0 gaggaggctgcatagggtaaaga tccacattaccctcttgctcaaa 7 19 7 1.1.2.3.7.19 BCBC-5A-0 14095078 P106309 Dhdds DistalPromoter P106309 DistalPromoter Unique Tile chr4:133274331-133276281 (-) NM_026144 - 1391 133272940 67422 Dhdds 3222401G21Rik|DS|HDS|W91638 dehydrodolichyl diphosphate synthase MGI:1914672 Mm.100290 4 4 D3 DHDDS 79947 NM_145833 - 14568 133290849 83557 Lin28 0 ctgggaccatggcttatccttac tcatcatccattgtcttgcctct 7 19 8 1.1.2.3.8.19 BCBC-5A-0 14095097 P203059 Jam4 ProximalPromoter P203059 ProximalPromoter Unique Tile chr16:96465490-96466536 (+) NM_028078 + 167 96466703 72058 Jam4 2010003D20Rik|Igsf5|JCAM junction adhesion molecule 4 MGI:1919308 Mm.119714 16 16 C4 LOC150084 150084 1 ctctgagagagagggtctcatgg tacccagtccaaacacaggaagt 7 19 9 1.1.2.3.9.19 BCBC-5A-0 14095116 P203138 Bcl11b ProximalPromoter P203138 ProximalPromoter Unique Tile chr12:108451377-108452360 (-) NM_021399 - 349 108451028 58208 Bcl11b B630002E05Rik|Ctip2|Rit1 B-cell leukemia/lymphoma 11B MGI:1929913 Mm.254329 12 12 F1|12 52.0 cM BCL11B 64919 NM_176964 - 31945 108419432 319630 A130014H13Rik 0 ttttatctgtcgcctcagtctcc acttttctttcggggtctggtag 7 19 10 1.1.2.3.10.19 BCBC-5A-0 14095135 P203986 Coq3 ProximalPromoter P203986 ProximalPromoter Unique Tile chr4:21969401-21970334 (+) NM_172687 + 173 21970507 230027 Coq3 4732433J24|C77934 coenzyme Q3 homolog, methyltransferase (yeast) MGI:101813 Mm.5662 4 4 A3|4 16.6 cM COQ3 51805 0 tcaatccagcaaaaacatgacac aaaggccacgaagacctacctac 7 19 11 1.1.2.3.11.19 BCBC-5A-0 14095154 P202698 Selm ProximalPromoter P202698 ProximalPromoter Unique Tile chr11:3413797-3414747 (+) NM_053267 + 43 3414704 114679 Selm 1500040L08Rik|A230103K18|Sepm selenoprotein M MGI:2149786 Mm.34046 11 - SELM 140606 NM_172439 - 8973 3404824 170835 Pib5pa 0 actggttaaatccagggtgacaa ctctggtcctccagacttcatgt 7 19 12 1.1.2.3.12.19 BCBC-5A-0 14095173 P205008 ProximalPromoter P205008 ProximalPromoter Duplication Tile chr13:65544777-65545711 (-) 0 actatgtcagagcacagggaagc atctgggaggcacgtaataaaca 7 19 13 1.1.2.3.13.19 BCBC-5A-0 14095192 P202939 Zfp180 ProximalPromoter P202939 ProximalPromoter Unique Tile chr7:23789452-23790522 (+) NM_172483 + 161 23790683 210135 Zfp180 2310040I01Rik|AI852378|D130011P11|HHZ168 zinc finger protein 180 MGI:1923701 Mm.32254 7 7 A3 ZNF180 7733 NM_203489 + 25919 23763533 209824 V1rd15 0 ctagactgaacggagccatgagt atgggaaagtcctcttgtaagcc 7 19 14 1.1.2.3.14.19 BCBC-5A-0 14095211 P206225 Pafah1b1 ProximalPromoter P206225 ProximalPromoter Unique Tile chr11:74540788-74541756 (-) NM_013625 - 77 74540865 18472 Pafah1b1 LIS-1|Lis1|MGC25297|MMS10-U|Mdsh|Ms10u|Pafaha platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit Mm.56337 11 11 B3|11 44.0 cM NM_026197 + 45301 74587057 67493 Mett10d 0 ctccgtctcctcagtgttagcat ccttttgctctaaactgcctgac 7 19 15 1.1.2.3.15.19 BCBC-5A-0 14095230 P200665 Pus3 ProximalPromoter P200665 ProximalPromoter Unique Tile chr9:35307831-35308912 (+) NM_023292 + 224 35309136 67049 Pus3 2610020J05Rik pseudouridine synthase 3 MGI:1914299 Mm.425574 9 9 A5.3 PUS3 83480 NM_013932 - 254 35308085 30959 Ddx25 0 ttctgggagtctccttttctgtg agatcctgtcccaacatcgttta 7 19 16 1.1.2.3.16.19 BCBC-5A-0 14095249 P210157 Usp45 ProximalPromoter P210157 ProximalPromoter Unique Tile chr4:21866319-21867253 (+) NM_152825 + 121 21867132 77593 Usp45 3110003C05Rik|4930550B20Rik|AI843191|Gcap7 ubiquitin specific petidase 45 MGI:101850 Mm.154306 4 4 A3 USP45 85015 NM_016746 + 47759 21818560 51813 Ccnc 1 ggaaacaacaaaccacaacaaca ggaaacctctctttctaggctgg 7 19 17 1.1.2.3.17.19 BCBC-5A-0 14095268 P209360 Rpl7 ProximalPromoter P209360 ProximalPromoter Unique Tile chr1:16089603-16090604 (+) NM_011291 - 2 16089601 19989 Rpl7 MGC102113|Rpl7a|Surf-3 ribosomal protein L7 MGI:98073 Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450; Mm.282053; Mm.319659; Mm.379004; Mm.397450 1 1 A3 RPL7 6129 NM_133832 + 491 16091095 98711 Rdh10 1 ggaaaagaagagagaaaggtggc acactccgcgctatataacccac 7 19 18 1.1.2.3.18.19 BCBC-5A-0 14095287 P001872 Cy3 Anchor P001872 Anchor Control Positive Cy3 Anchor 7 19 19 1.1.2.3.19.19 BCBC-5A-0 14095288 P100096 Cd82 ProximalPromoter P100096 ProximalPromoter Unique Tile chr2:93263691-93264672 (-) NM_007656 - 358 93263333 12521 Cd82 AA682076|AL023070|C33|Kai1|Tspan27 CD82 antigen MGI:104651 Mm.4261 2 2 E1|2 49.6 cM CD82 3732 0 agttgtttctgggtgcctcaa gtcctctgaagccctcctgtt 8 1 1 1.1.2.4.1.1 BCBC-5A-0 14095307 P100936 Prkce ProximalPromoter P100936 ProximalPromoter Unique Tile chr17:86075517-86076379 (+) NM_011104 + 536 86076915 18754 Prkce 5830406C15Rik|PKC[e]|Pkce|R75156 protein kinase C, epsilon MGI:97599 Mm.24614; Mm.391973; Mm.24614; Mm.391973; Mm.24614; Mm.391973; Mm.24614; Mm.391973; Mm.24614; Mm.391973; Mm.24614; Mm.391973; Mm.24614; Mm.391973; Mm.24614; Mm.391973 17 17 E4 PRKCE 5581 NM_030133 - 46469 86029048 78586 Srbd1 1 gtcttcttggacattgcgacc gagggatgtgcagtctatccg 8 1 2 1.1.2.4.2.1 BCBC-5A-0 14095326 P101686 Eed ProximalPromoter P101686 ProximalPromoter Unique Tile chr7:89856071-89857033 (-) NM_021876 - 73 89856144 13626 Eed l(7)5Rn|l7Rn5|lusk embryonic ectoderm development MGI:95286 Mm.380914 7 7 D3|7 47.0 cM EED 8726 NM_026304 - 39694 89816377 67669 0610007P06Rik 0 gggtctataacgaagcccagg ctagagacgaggcggaactca 8 1 3 1.1.2.4.3.1 BCBC-5A-0 14095345 P102819 Brd2 ProximalPromoter P102819 ProximalPromoter Unique Tile chr17:33729974-33731053 (-) NM_001025387;NM_010238; - 863 33730837 14312 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg1|KIAA4005|NAT|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 MGI:99495 Mm.3444 17 17 D|17 18.53 cM BRD2 6046 NM_010386 + 15028 33746081 14998 H2-DMa 1 tttgccatctgaccttgagaact aaggatgacgtcacaaactccag 8 1 4 1.1.2.4.4.1 BCBC-5A-0 14095364 P103569 Drg2 ProximalPromoter P103569 ProximalPromoter Unique Tile chr11:60269547-60270604 (+) NM_021354 + 207 60270811 13495 Drg2 AI255295|AI461605 developmentally regulated GTP binding protein 2 MGI:1342307 Mm.41803 11 11 B2|11 33.85 cM DRG2 1819 NM_010862;NM_182698; + 14929 60285533 17910 Myo15 0 tggaaatgttatggggctagaga gggggaatctcttttctctttga 8 1 5 1.1.2.4.5.1 BCBC-5A-0 14095383 P106637 Chkb DistalPromoter P106637 DistalPromoter Unique Tile chr15:89258874-89260854 (-) NM_007692 - 1208 89257666 12651 Chkb CK/EK|CK/EK-beta|Chetk|Chkl choline kinase beta MGI:1328313 Mm.227738 15 15 E3 CHKB 1120 NM_176900 + 1585 89257289 319362 C730034F03Rik 0 ctgctctgccaacacatacacac tcagagagcagccttaagagcaa 8 1 6 1.1.2.4.6.1 BCBC-5A-0 14095402 P107126 Col10a1 DistalPromoter P107126 DistalPromoter Unique Tile chr10:34077004-34078866 (+) NM_009925 + 384 34079250 12813 Col10a1 Col10a-1 procollagen, type X, alpha 1 MGI:88445 Mm.212657 10 10 22.0 cM COL10A1 1300 NM_176968 - 29041 34107907 319638 Nt5dc1 0 atcccataaacaaccaccaaacc ggaaagctcttagaagctggtgc 8 1 7 1.1.2.4.7.1 BCBC-5A-0 14095421 P105225 Sfrs4 DistalPromoter P105225 DistalPromoter Unique Tile chr4:131166967-131168936 (+) NM_020587 + 870 131169806 57317 Sfrs4 5730499P16Rik|AW550192|MNCb-2616 splicing factor, arginine/serine-rich 4 (SRp75) MGI:1890577 Mm.2478 4 4 D2.3 SFRS4 6429 0 tgtggctagctcaaagtagtggc ttgtgcaggaatagaaaccctga 8 1 8 1.1.2.4.8.1 BCBC-5A-0 14095440 P106409 Col2a1 DistalPromoter P106409 DistalPromoter Unique Tile chr15:97833653-97835841 (-) NM_031163 - 962 97832691 12824 Col2a1 Col2a|Col2a-1|Del1|Dmm|MGC90638 procollagen, type II, alpha 1 MGI:88452 Mm.2423 15 15 F1|15 54.5 cM COL2A1 1280 NM_201359 + 41341 97792312 380967 Tmem106c 0 taatctttctgccccctcttctg gtttcctagttattcccccaccc 8 1 9 1.1.2.4.9.1 BCBC-5A-0 14095459 P201823 Arfrp1 ProximalPromoter P201823 ProximalPromoter Unique Tile chr2:181294998-181296030 (-) NM_029702 - 230 181294768 76688 Arfrp1 1500006I01Rik|AI480700|MGC6837 ADP-ribosylation factor related protein 1 MGI:1923938 Mm.87720 2 2 H4 ARFRP1 10139 NM_144894 + 76 181294922 229007 Zgpat 0 ccacctgtaatcctagcatttgg cgttgccctgagttgttcttact 8 1 10 1.1.2.4.10.1 BCBC-5A-0 14095478 P202197 Zfp526 ProximalPromoter P202197 ProximalPromoter Unique Tile chr7:24929281-24930346 (+) NM_175436 + 136 24930210 210172 Zfp526 D030024H03Rik|MGC106217 zinc finger protein 526 MGI:2445181 Mm.129371 7 7 A3 ZNF526 116115 NM_207677 - 642 24928639 67379 Dedd2 2 cttctgagccctcttgagtcttg cttccctcttcctccactctctc 8 1 11 1.1.2.4.11.1 BCBC-5A-0 14095497 P205660 Ncam1 ProximalPromoter P205660 ProximalPromoter Unique Tile chr9:49551411-49552380 (-) NM_010875 - 291 49551120 17967 Ncam1 CD56|E-NCAM|NCAM-1|NCAM-120|NCAM-140|NCAM-180|Ncam neural cell adhesion molecule 1 MGI:97281 Mm.4974 9 9 A5.3|9 28.0 cM NCAM1 4684 0 ctagcagaaggtgggttttctga ctgggatttcttttcaccctttt 8 1 12 1.1.2.4.12.1 BCBC-5A-0 14095516 P201366 B230380D07Rik ProximalPromoter P201366 ProximalPromoter Unique Tile chr9:70456550-70457589 (-) NM_172772 - 228 70456322 235461 B230380D07Rik KIAA1164|mKIAA1164 RIKEN cDNA B230380D07 gene MGI:2443086 Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780; Mm.170855; Mm.392780 9 9 D NM_007399 + 20753 70478342 11487 Adam10 0 agagagtgccgagaaagagatca gcgccactaggaaaataatcttg 8 1 13 1.1.2.4.13.1 BCBC-5A-0 14095535 P204741 Nrg3 ProximalPromoter P204741 ProximalPromoter Unique Tile chr14:38385051-38386084 (-) NM_008734 - 84 38384967 18183 Nrg3 ska neuregulin 3 MGI:1097165 Mm.387480 14 14 B NRG3 10718 1 gatcacagaaaggtcgtctgctt ctgatgctgatgctgatgctg 8 1 14 1.1.2.4.14.1 BCBC-5A-0 14095554 P202578 Nap1l2 ProximalPromoter P202578 ProximalPromoter Unique Tile chrX:99389128-99390161 (-) NM_008671 - 44 99389084 17954 Nap1l2 Bpx nucleosome assembly protein 1-like 2 MGI:106654 Mm.1441 X X D|X 42.5 cM NAP1L2 4674 0 cccagaactgctatatgtggagg atctggcagagatgaaccaagag 8 1 15 1.1.2.4.15.1 BCBC-5A-0 14095573 P206640 Elovl1 ProximalPromoter P206640 ProximalPromoter Unique Tile chr4:117925242-117926167 (+) NM_019422;NM_001039176;NM_001039175; + 114 117926053 54325 Elovl1 AA407424|BB151133|Ssc1 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 MGI:1858959 Mm.282096 4 4 D2.1 ELOVL1 64834 NM_023223 - 9014 117935181 107995 Cdc20 1 gttagtgtggggagcagagctta catggaaggtacacactcaccag 8 1 16 1.1.2.4.16.1 BCBC-5A-0 14095592 P200294 Ppp1r7 ProximalPromoter P200294 ProximalPromoter Unique Tile chr1:95173081-95174067 (+) NM_023200 + 17 95174050 66385 Ppp1r7 2310014J01Rik|SDS22 protein phosphatase 1, regulatory (inhibitor) subunit 7 MGI:1913635 Mm.88704 1 1 D PPP1R7 5510 NM_080850 - 5101 95167980 269224 Pask 0 cgacaatgcgtaactaacactcg atattggctgctctttccctttc 8 1 17 1.1.2.4.17.1 BCBC-5A-0 14095611 P209597 Galnt2 ProximalPromoter P209597 ProximalPromoter Unique Tile chr8:127116785-127117689 (+) NM_139272 + 151 127117538 108148 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 MGI:894694 Mm.33808 8 8 E2 GALNT2 2590 1 agtcacaaggtcatggacaaggt agtacatgtagtaggcgatgccc 8 1 18 1.1.2.4.18.1 BCBC-5A-0 14095630 P207734 Ssr1 ProximalPromoter P207734 ProximalPromoter Unique Tile chr13:38001606-38002412 (-) NM_025965 - 15 38001591 107513 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha MGI:105082 Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670; Mm.138725; Mm.409778; Mm.426670 13 13 A3.3 SSR1 6745 NM_027724 - 37532 38039944 71213 Cage1 0 cactacatcccgagtgtttcaca gtaatggcgttactcttcatccg 8 1 19 1.1.2.4.19.1 BCBC-5A-0 14095289 P100120 Comt ProximalPromoter P100120 ProximalPromoter Unique Tile chr16:18340726-18341807 (-) NM_007744 - 651 18340075 12846 Comt D16Wsu103e|D330014B15Rik catechol-O-methyltransferase MGI:88470 Mm.100940 16 16 A3|16 11.2 cM COMT 1312 NM_013711 + 726 18340000 26462 Txnrd2 0 aagggccctagacttgtgagc ctgcctagtgtttggggagtg 8 2 1 1.1.2.4.1.2 BCBC-5A-0 14095308 P100870 Phyh ProximalPromoter P100870 ProximalPromoter Unique Tile chr2:4834905-4835840 (+) NM_010726 + 450 4836290 16922 Phyh AI256161|AI265699|Lnap1|PAHX phytanoyl-CoA hydroxylase MGI:891978 Mm.27066 2 2 A1 PHYH 5264 NM_175400 + 36030 4798875 109079 Sephs1 1 caattctgcttgaggtgaccc ggtgtggtgtgtgtgtgtgtg 8 2 2 1.1.2.4.2.2 BCBC-5A-0 14095327 P101710 Fgf23 ProximalPromoter P101710 ProximalPromoter Unique Tile chr6:127037123-127038120 (+) NM_022657 + 400 127038520 64654 Fgf23 - fibroblast growth factor 23 MGI:1891427 Mm.347933 6 6 F3 FGF23 8074 NM_177003 - 37035 127075155 319801 9630033F20Rik 0 ttgaggccagttagggctaca cagctgccaagtgtgttcttg 8 2 3 1.1.2.4.3.2 BCBC-5A-0 14095346 P102843 Aes ProximalPromoter P102843 ProximalPromoter Unique Tile chr10:80961352-80962289 (+) NM_010347 + 399 80962688 14797 Aes AL024115|Grg|Grg5 amino-terminal enhancer of split MGI:95806 Mm.180013 10 10 C1|10 43.0 cM AES 166 NM_010301 - 13177 80948175 14672 Gna11 2 aattgtaggaatcctcctgcctc aatctaatgactggggtgcagag 8 2 4 1.1.2.4.4.2 BCBC-5A-0 14095365 P103593 Nup160 ProximalPromoter P103593 ProximalPromoter Unique Tile chr2:90476800-90477889 (+) NM_021512 + 164 90478053 59015 Nup160 160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|KIAA0197|mKIAA0197 nucleoporin 160 MGI:1926227 Mm.24532 2 2 E1 NUP160 23279 0 cattataacccagtgcccaacat aaataagactccctcccatgctc 8 2 5 1.1.2.4.5.2 BCBC-5A-0 14095384 P106737 Gstm2 DistalPromoter P106737 DistalPromoter Unique Tile chr3:108115209-108117384 (-) NM_008183 - 716 108114493 14863 Gstm2 Gstb-2|Gstb2 glutathione S-transferase, mu 2 MGI:95861 Mm.37199; Mm.391065; Mm.37199; Mm.391065; Mm.37199; Mm.391065; Mm.37199; Mm.391065; Mm.37199; Mm.391065; Mm.37199; Mm.391065; Mm.37199; Mm.391065 3 3 F2.3 GSTM2 2946 NM_010359 - 17995 108097214 14864 Gstm3 0 ctccagcttgtttcttcagtcca gctaccacgtgatccagcaatac 8 2 6 1.1.2.4.6.2 BCBC-5A-0 14095403 P107148 Cyp2c39 DistalPromoter P107148 DistalPromoter Unique Tile chr19:39560961-39563140 (+) NM_010003 + 1041 39564181 13098 Cyp2c39 - cytochrome P450, family 2, subfamily c, polypeptide 39 MGI:1306818 Mm.42101 19 19 C3 NM_010002 - 44575 39516386 13097 Cyp2c38 0 cagtctatacatttggcccagga ttcttgaccttgaaccatgcact 8 2 7 1.1.2.4.7.2 BCBC-5A-0 14095422 P105249 Ghrl DistalPromoter P105249 DistalPromoter Unique Tile chr6:113686616-113688654 (-) NM_021488 - 959 113685657 58991 Ghrl 2210006E23Rik|MTLRP|MTLRPAP|m46 ghrelin MGI:1930008 Mm.379095 6 6 E3|6 49.7 cM GHRL 51738 NM_024206 - 17804 113706458 110379 Sec13l1 0 ctgtggcgattacaaggattcag tcctgaagcagttttctgacctg 8 2 8 1.1.2.4.8.2 BCBC-5A-0 14095441 P106431 Aldh1a3 DistalPromoter P106431 DistalPromoter Unique Tile chr7:66307339-66309167 (-) NM_053080 - 938 66306401 56847 Aldh1a3 ALDH6|RALDH3|V1 aldehyde dehydrogenase family 1, subfamily A3 MGI:1861722 Mm.140988 7 7 C ALDH1A3 220 NM_146191 - 40048 66267291 233328 Lrrk1 0 tgagcagaaaactgaagtctggg tttaggaaacgcttctttcagcc 8 2 9 1.1.2.4.9.2 BCBC-5A-0 14095460 P201755 5730410E15Rik ProximalPromoter P201755 ProximalPromoter Unique Tile chr15:44618354-44619280 (-) NM_176998;NM_001032727;NM_178765; - 217 44618137 319613 5730410E15Rik A830027B17Rik|Golsyn|KIAA1472|mKIAA1472 RIKEN cDNA 5730410E15 gene MGI:2442392 Mm.207715 15 15 B3.2 NM_183176 + 36001 44582353 239410 A930017M01Rik 0 tgggatgtagaaagaggaaacca caaaaggagacaacattcccaac 8 2 10 1.1.2.4.10.2 BCBC-5A-0 14095479 P202222 Mmp28 ProximalPromoter P202222 ProximalPromoter Unique Tile chr11:83279339-83280429 (-) NM_172797;NM_080453; - 183 83279156 118453 Mmp28 D130023P12 matrix metallopeptidase 28 (epilysin) MGI:2153062 Mm.264648 11 11 C MMP28 79148 NM_027427 + 8873 83289302 70439 Taf15 0 ccactgcatagttaagcaaaccc actctgtgcttggttccagtttc 8 2 11 1.1.2.4.11.2 BCBC-5A-0 14095498 P205684 Npy1r ProximalPromoter P205684 ProximalPromoter Unique Tile chr8:69625499-69626440 (+) NM_010934 + 30 69626410 18166 Npy1r Npyr|Y1-R neuropeptide Y receptor Y1 MGI:104963 Mm.391585; Mm.5112; Mm.391585; Mm.5112; Mm.391585; Mm.5112; Mm.391585; Mm.5112; Mm.391585; Mm.5112; Mm.391585; Mm.5112 8 8 B3-C2|8 33.0 cM NPY1R 4886 NM_016708 - 8416 69617083 18168 Npy5r 0 ttctgtgtgtatgcacctgtgtg ggtatttctcctgctcaaaccct 8 2 12 1.1.2.4.12.2 BCBC-5A-0 14095517 P201390 Itm2c ProximalPromoter P201390 ProximalPromoter Unique Tile chr1:87724471-87725471 (+) NM_022417 + 264 87725735 64294 Itm2c 3110038L02Rik|AU041202|BRI3|E25|E25C|ITM3|R75508 integral membrane protein 2C MGI:1927594 Mm.29870 1 1 C5 ITM2C 81618 0 tacctggactggcaatatggact ccctcctcctcgatatctttgat 8 2 13 1.1.2.4.13.2 BCBC-5A-0 14095536 P205537 Itgb5 ProximalPromoter P205537 ProximalPromoter Unique Tile chr16:33748212-33749201 (+) NM_010580 + 246 33749447 16419 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 MGI:96614 Mm.6424 16 16 B3 ITGB5 3693 NM_010739 + 34099 33714113 17063 Muc13 2 tctctgtgtagccctagctgtcc ttaggcctgcagagattacttgg 8 2 14 1.1.2.4.14.2 BCBC-5A-0 14095555 P202602 Tmem51 ProximalPromoter P202602 ProximalPromoter Unique Tile chr4:141356630-141357624 (-) NM_145402 - 250 141356380 214359 Tmem51 BC003277|FLJ10199 transmembrane protein 51 MGI:2384874 Mm.27587 4 4 E1 TMEM51 55092 0 gacagacctgcccagctagatta aaggaggaaggaagggaagtttt 8 2 15 1.1.2.4.15.2 BCBC-5A-0 14095574 P206666 Acsl4 ProximalPromoter P206666 ProximalPromoter Unique Tile chrX:137636719-137637691 (-) NM_019477;NM_001033600;NM_207625; - 20 137636699 50790 Acsl4 9430020A05Rik|ACS4|AU018108|Facl4|Lacs4 acyl-CoA synthetase long-chain family member 4 MGI:1354713 Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337; Mm.143689; Mm.391337 X X F2 ACSL4 2182 2 cggtcatggaactggaagaatag cttaagaggaaggaagctcctgg 8 2 16 1.1.2.4.16.2 BCBC-5A-0 14095593 P200319 Bpil1 ProximalPromoter P200319 ProximalPromoter Unique Tile chr2:153565173-153566251 (+) NM_025631 + 262 153566513 66557 Bpil1 2310034L21Rik|2310069A01Rik|AV089125|LPLUNC2|MGC144836|MGC144837|RYSR bactericidal/permeability-increasing protein-like 1 MGI:1913807 Mm.46448 2 2 H1 BPIL1 80341 NM_029599 - 2648 153562525 76407 Spag4l 1 gtgcatatgtaatggcgaatcct agctctctcaccataccatccag 8 2 17 1.1.2.4.17.2 BCBC-5A-0 14095612 P209530 Tomm70a ProximalPromoter P209530 ProximalPromoter Unique Tile chr16:57041851-57042898 (+) NM_138599 + 173 57043071 28185 Tomm70a 2610044B22Rik|28185|D16Ium22|D16Ium22e|D16Wsu109e|mKIAA0719 translocase of outer mitochondrial membrane 70 homolog A (yeast) MGI:106295 Mm.213292 16 16 C1.1|16 36.9 cM TOMM70A 9868 NM_183281 - 45554 56996297 69457 2310005G13Rik 2 aatgaccatctatgggtgtttgg cagacctcttctccaggacagaa 8 2 18 1.1.2.4.18.2 BCBC-5A-0 14095631 P207758 Cmtm6 ProximalPromoter P207758 ProximalPromoter Unique Tile chr9:114578713-114579721 (+) NM_026036 + 179 114579900 67213 Cmtm6 2810051A14Rik|AA536733|Cklfsf6 CKLF-like MARVEL transmembrane domain containing 6 MGI:2447165 Mm.28858 9 9 F3 CMTM6 54918 NM_146229 + 41185 114537528 235661 Dync1li1 0 acacactgccctaaaacagggta tcctgctctctggttaactctcg 8 2 19 1.1.2.4.19.2 BCBC-5A-0 14095290 P100144 Ddost ProximalPromoter P100144 ProximalPromoter Unique Tile chr4:137575183-137576208 (+) NM_007838 + 605 137576813 13200 Ddost - dolichyl-di-phosphooligosaccharide-protein glycotransferase MGI:1194508 Mm.396444; Mm.7236; Mm.396444; Mm.7236; Mm.396444; Mm.7236; Mm.396444; Mm.7236; Mm.396444; Mm.7236; Mm.396444; Mm.7236; Mm.396444; Mm.7236; Mm.396444; Mm.7236; Mm.396444; Mm.7236; Mm.396444; Mm.7236; Mm.396444; Mm.7236; Mm.396444; Mm.7236 4 4 D3 DDOST 1650 NM_026880 - 22132 137598340 68943 Pink1 0 cagactaccaaaggccactgc ggtgatcccctgaacaatcaa 8 3 1 1.1.2.4.1.3 BCBC-5A-0 14095309 P100894 Msl31 ProximalPromoter P100894 ProximalPromoter Unique Tile chrX:164015966-164016865 (-) NM_010832 - 1978 164017944 17692 Msl31 AU018931|Msl3l1 male-specific lethal-3 homolog 1 (Drosophila) MGI:1341851 Mm.24248; Mm.400572; Mm.24248; Mm.400572; Mm.24248; Mm.400572; Mm.24248; Mm.400572; Mm.24248; Mm.400572; Mm.24248; Mm.400572; Mm.24248; Mm.400572; Mm.24248; Mm.400572; Mm.24248; Mm.400572; Mm.24248; Mm.400572; Mm.24248; Mm.400572 X X F5 MSL3L1 10943 0 tattaaggggaggggaagggt acatgttcttcagctgcccat 8 3 2 1.1.2.4.2.3 BCBC-5A-0 14095328 P102016 Pnpla8 ProximalPromoter P102016 ProximalPromoter Unique Tile chr12:45151563-45152496 (+) NM_026164 + 13025 45139471 67452 Pnpla8 1200006O19Rik|AI467579|Ipla2(gamma) patatin-like phospholipase domain containing 8 MGI:1914702 Mm.54126 12 12 B3 PNPLA8 50640 NM_176930 + 46777 45199273 319504 C130076O07Rik 0 ttgttcagtgggtctcaccct aagcgttcactgcagatgtca 8 3 3 1.1.2.4.3.3 BCBC-5A-0 14095347 P102867 Hoxa6 ProximalPromoter P102867 ProximalPromoter Unique Tile chr6:52138219-52139235 (-) NM_010454 - 12 52138207 15403 Hoxa6 Hox-1.2 homeo box A6 MGI:96178 Mm.222030 6 6 B3|6 26.3 cM HOXA6 3203 NM_010453 - 4049 52134170 15402 Hoxa5 1 tgtatccggttgtttttccgtag tctgcaggactgtgatttgttgt 8 3 4 1.1.2.4.4.3 BCBC-5A-0 14095366 P103617 Sav1 ProximalPromoter P103617 ProximalPromoter Unique Tile chr12:70906036-70907047 (-) NM_022028 - 429 70905607 64010 Sav1 1700040G09Rik|Sav|WW45|Wwp3|Wwp4 salvador homolog 1 (Drosophila) MGI:1927144 Mm.390480 12 12 C3 SAV1 60485 0 tctcacacagcatccaaagtgat tcttctggtgacagcgtgactac 8 3 5 1.1.2.4.5.3 BCBC-5A-0 14095385 P106759 Tfb2m DistalPromoter P106759 DistalPromoter Unique Tile chr1:181383900-181385972 (-) NM_008249 - 961 181382939 15278 Tfb2m Hkp1 transcription factor B2, mitochondrial MGI:107937 Mm.293529; Mm.390474; Mm.293529; Mm.390474; Mm.293529; Mm.390474; Mm.293529; Mm.390474; Mm.293529; Mm.390474; Mm.293529; Mm.390474; Mm.293529; Mm.390474; Mm.293529; Mm.390474; Mm.293529; Mm.390474; Mm.293529; Mm.390474 1 1 H3|1 97.6 cM TFB2M 64216 NM_146105 + 697 181383203 226744 9630058J23Rik 0 atgagggaggcactggctataag tgggaattttggcagtgttagaa 8 3 6 1.1.2.4.6.3 BCBC-5A-0 14095404 P107091 Bcl2 DistalPromoter P107091 DistalPromoter Unique Tile chr1:108541299-108543175 (-) NM_009741;NM_177410; - 192 108541491 12043 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B-cell leukemia/lymphoma 2 MGI:88138 Mm.257460 1 1 E2.1|1 59.8 cM BCL2 596 NM_027534 - 44023 108587198 70750 Fvt1 0 aggtatcactccctgaggtccag ggcaatttacacttgcacacaca 8 3 7 1.1.2.4.7.3 BCBC-5A-0 14095423 P105273 Eed DistalPromoter P105273 DistalPromoter Unique Tile chr7:89856985-89858787 (-) NM_021876 - 823 89856162 13626 Eed l(7)5Rn|l7Rn5|lusk embryonic ectoderm development MGI:95286 Mm.380914 7 7 D3|7 47.0 cM EED 8726 NM_026304 - 40608 89816377 67669 0610007P06Rik 0 gccatatggtactgagaaagggg ttggtctacacgaggagttccag 8 3 8 1.1.2.4.8.3 BCBC-5A-0 14095442 P105651 Scn4a DistalPromoter P105651 DistalPromoter Unique Tile chr11:106166722-106168809 (-) NM_133199 - 1242 106165480 110880 Scn4a Nav1.4|mH2 sodium channel, voltage-gated, type IV, alpha MGI:98250 Mm.218743 11 11 E1|11 64.0 cM SCN4A 6329 NM_010494 - 29854 106198663 15896 Icam2 1 ccatgtggttactgggaattgaa gtaaagggggatgggataacctc 8 3 9 1.1.2.4.9.3 BCBC-5A-0 14095461 P201780 A830093I24Rik ProximalPromoter P201780 ProximalPromoter Unique Tile chr12:4786343-4787261 (-) NM_175431 - 90 4786253 207921 A830093I24Rik - RIKEN cDNA A830093I24 gene MGI:2442121 Mm.184898 12 12 A1.1 NM_028376 + 28 4786315 382562 Pfn4 0 tcttttcctggagtttgatgagg cgtctcctcttgtagcccctact 8 3 10 1.1.2.4.10.3 BCBC-5A-0 14095480 P206123 Islr ProximalPromoter P206123 ProximalPromoter Unique Tile chr9:57956853-57957814 (-) NM_012043 - 426 57957279 26968 Islr AW553146 immunoglobulin superfamily containing leucine-rich repeat MGI:1349645 Mm.186499 9 9 B ISLR 3671 NM_009291 + 29368 57927485 20897 Stra6 0 tacaaaccaccatcacacagtcc tgtggcctgttctgttcaaacta 8 3 11 1.1.2.4.11.3 BCBC-5A-0 14095499 P205708 Padi1 ProximalPromoter P205708 ProximalPromoter Unique Tile chr4:140118119-140119096 (-) NM_011059 - 265 140117854 18599 Padi1 AV236283|Pdi1 peptidyl arginine deiminase, type I MGI:1338893 Mm.20854 4 4 E1|4 71.0 cM PADI1 29943 NM_011060 - 35395 140082724 18601 Padi3 1 cgtgcttgtgtctgtctgtctct cctctctgagggctcacactaag 8 3 12 1.1.2.4.12.3 BCBC-5A-0 14095518 P201414 B430306N03Rik ProximalPromoter P201414 ProximalPromoter Duplication Tile chr17:47780542-47781493 (+) NM_177083 + 235 47781728 320148 B430306N03Rik - RIKEN cDNA B430306N03 gene MGI:2443478 Mm.123455 17 17 C NM_001033405 + 15036 47765506 328833 Treml2 0 tttccatttaaaggttccccact ggaaaggagatgggcatttattc 8 3 13 1.1.2.4.13.3 BCBC-5A-0 14095537 P205561 Klrd1 ProximalPromoter P205561 ProximalPromoter Unique Tile chr6:129556681-129557697 (+) NM_010654 + 1483 129559180 16643 Klrd1 CD94 killer cell lectin-like receptor, subfamily D, member 1 MGI:1196275 Mm.391515 6 6 F3|6 62.52 cM KLRD1 3824 NM_153590 + 13084 129543597 243655 Klre1 0 aagtgtgtgttggggagagagag aacacagaaagcatcaaagcaca 8 3 14 1.1.2.4.14.3 BCBC-5A-0 14095556 P202535 Arhgap12 ProximalPromoter P202535 ProximalPromoter End Repeat Tile chr18:6136105-6137141 (-) NM_029277;NM_001039692; - 9 6136096 75415 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 MGI:1922665 Mm.239675 18 18 A1 ARHGAP12 94134 0 ttctaaagccgctagacatttcg gggtagtaaccacgtgataagcg 8 3 15 1.1.2.4.15.3 BCBC-5A-0 14095575 P206691 Pfpl ProximalPromoter P206691 ProximalPromoter Unique Tile chr19:12493938-12495017 (+) NM_019540 + 36 12494981 56093 Pfpl Epcs5|Epcs50 pore forming protein-like MGI:1860266 Mm.285849 19 19 A NM_146683 + 4583 12489355 258678 Olfr1441 0 gcccactgggttcttcttttagt cagtctccagtgccagattcttt 8 3 16 1.1.2.4.16.3 BCBC-5A-0 14095594 P200343 ProximalPromoter P200343 ProximalPromoter No Hits Tile 0 catctatctgggtgcaggtatcc ggagacggacatttcattctagc 8 3 17 1.1.2.4.17.3 BCBC-5A-0 14095613 P209554 Shkbp1 ProximalPromoter P209554 ProximalPromoter Unique Tile chr7:27064943-27065980 (-) NM_138676 - 175 27064768 192192 Shkbp1 B930062H15Rik|Sb1 Sh3kbp1 binding protein 1 MGI:2385803 Mm.21297 7 7 A3 SHKBP1 92799 NM_175641 - 18491 27046452 108075 Ltbp4 0 aaagacaacttctcatccgcaag cccccttttctaggttcccttat 8 3 18 1.1.2.4.18.3 BCBC-5A-0 14095632 P208357 2310010M24Rik ProximalPromoter P208357 ProximalPromoter Unique Tile chr2:49608500-49609541 (+) NM_027990 + 155 49609696 71897 2310010M24Rik AW049525 RIKEN cDNA 2310010M24 gene MGI:1919147 Mm.41381 2 2 C1.1 LOC130576 130576 0 tcttttagagtctgtggcttggg tgaacgcgagtaggtcgtttaat 8 3 19 1.1.2.4.19.3 BCBC-5A-0 14095291 P100168 Ell ProximalPromoter P100168 ProximalPromoter Unique Tile chr8:73467563-73468465 (+) NM_007924 + 225 73468690 13716 Ell Ell1|Men elongation factor RNA polymerase II MGI:109377 Mm.271973 8 - ELL 8178 NM_010223 + 9048 73458515 14232 Fkbp8 0 cagcggcaactcctgaataac ccggagactgtgagtcttgct 8 4 1 1.1.2.4.1.4 BCBC-5A-0 14095310 P100918 Sqstm1 ProximalPromoter P100918 ProximalPromoter Unique Tile chr11:50054384-50055444 (-) NM_011018 - 171 50054213 18412 Sqstm1 A170|OSF-6|Osi|STAP|p62 sequestosome 1 MGI:107931 Mm.40828 11 11 B1.2 SQSTM1 8878 NM_145926 + 13611 50069055 103534 Mgat4b 0 atccctatgcaccaaattccc tctttcccaccgaatacatgg 8 4 2 1.1.2.4.2.4 BCBC-5A-0 14095329 P102040 4930570C03Rik ProximalPromoter P102040 ProximalPromoter Unique Tile chr15:97610779-97611782 (+) NM_026353 + 616 97612398 67739 4930570C03Rik - RIKEN cDNA 4930570C03 gene MGI:1914989 Mm.28955 15 15 F2 NM_144850 - 15079 97595700 223864 Rapgef3 0 gcttttgctttgaccttccct gaggcagagggaagcagattt 8 4 3 1.1.2.4.3.4 BCBC-5A-0 14095348 P102801 F2rl2 ProximalPromoter P102801 ProximalPromoter Unique Tile chr13:96796250-96797178 (+) NM_010170 + 477 96797655 14064 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 MGI:1298208 Mm.38878 13 13 D1|13 47.02 cM F2RL2 2151 0 cctagaagccctgggtttagtgt aggcctacatgcaatgtcttcat 8 4 4 1.1.2.4.4.4 BCBC-5A-0 14095367 P103641 Apoc3 ProximalPromoter P103641 ProximalPromoter Unique Tile chr9:45986212-45987210 (-) NM_023114 - 64 45986276 11814 Apoc3 Apoc apolipoprotein C-III MGI:88055 Mm.390161 9 9 A5.2|9 27.0 cM APOC3 345 NM_007468 + 4628 45991838 11808 Apoa4 1 acaagagtgagttccaggacagc tttgtttcttcccttccttcctc 8 4 5 1.1.2.4.5.4 BCBC-5A-0 14095386 P106780 Hsd17b2 DistalPromoter P106780 DistalPromoter Unique Tile chr8:120584861-120586766 (+) NM_008290 + 1177 120587943 15486 Hsd17b2 AI194967 hydroxysteroid (17-beta) dehydrogenase 2 MGI:1096386 Mm.276466 8 8 E1 HSD17B2 3294 NM_028725 - 25248 120559613 74032 4632417N05Rik 0 gagaggaggtgagcctctgaatc tagaaaattcaggctgggagagg 8 4 6 1.1.2.4.6.4 BCBC-5A-0 14095405 P105717 Entpd1 DistalPromoter P105717 DistalPromoter Unique Tile chr19:40710154-40712120 (+) NM_009848 + 984 40713104 12495 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 MGI:102805 Mm.2824 19 19 C3|19 35.5 cM ENTPD1 953 NM_026260 - 44628 40665526 67590 4930521E07Rik 2 tttctgtaggccccaaatgctat tcctgtttaccacctcacttcca 8 4 7 1.1.2.4.7.4 BCBC-5A-0 14095424 P105803 Tpsg1 DistalPromoter P105803 DistalPromoter Unique Tile chr17:25095621-25097498 (+) NM_012034 + 685 25098183 26945 Tpsg1 Prss31|TMT tryptase gamma 1 MGI:1349391 Mm.180108 17 17 A3.3|17 10.38 cM TPSG1 25823 NM_010781 + 1472 25094149 17229 Mcpt6 0 tgcctcccaccacataatagttg ctggcctcccttaggtagctgta 8 4 8 1.1.2.4.8.4 BCBC-5A-0 14095443 P106473 Kcne2 DistalPromoter P106473 DistalPromoter Unique Tile chr16:92177727-92180204 (+) NM_134110 + 1043 92181247 246133 Kcne2 2200002I16Rik|AW048273|MiRP1 potassium voltage-gated channel, Isk-related subfamily, gene 2 MGI:1891123 Mm.156736 16 16 C4 KCNE2 9992 NM_138743 + 9973 92190177 68936 1190017O12Rik 2 tctgacttcaatggctgtcttcc cttccctggacctctttttgcta 8 4 9 1.1.2.4.9.4 BCBC-5A-0 14095462 P201805 Tsr2 ProximalPromoter P201805 ProximalPromoter Unique Tile chrX:146437082-146438064 (-) NM_175146 - 152 146437234 69499 Tsr2 2310007F12Rik TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) MGI:1916749 Mm.8142 X X F3 TSR2 90121 NM_008001 + 49134 146387948 14163 Fgd1 0 taagcagaaatttcctcatccca cgcctggtcaacttctattttgt 8 4 10 1.1.2.4.10.4 BCBC-5A-0 14095481 P206147 Anxa4 ProximalPromoter P206147 ProximalPromoter Unique Tile chr6:86759031-86760012 (-) NM_013471 - 135 86759166 11746 Anxa4 AI265406|AIV|AW106930|Anx4|Xanx-4 annexin A4 MGI:88030 Mm.259702 6 6 D1|6 38.0 cM ANXA4 307 0 tctagatcagccttcctcctcct tgaagtctagatctccaggtccg 8 4 11 1.1.2.4.11.4 BCBC-5A-0 14095500 P205641 Msc ProximalPromoter P205641 ProximalPromoter Unique Tile chr1:14741011-14741950 (-) NM_010827 - 72 14741083 17681 Msc MyoR musculin MGI:1333884 Mm.5820 1 1 A3|1 5.0 cM MSC 9242 1 ttaatcacgcggaggaaatctta agtctcgctttctctggcttctt 8 4 12 1.1.2.4.12.4 BCBC-5A-0 14095519 P201438 Lipl2 ProximalPromoter P201438 ProximalPromoter Unique Tile chr19:34073163-34074223 (+) NM_172837 + 63 34074286 240633 Lipl2 9930115F20|BC055815|MGC67675 lipase-like, ab-hydrolase domain containing 2 MGI:2679259 Mm.58924 19 19 C1 NM_026334 + 45919 34027244 67717 Lipf 0 gaagaaaacaaccctggtcctct ttatggcttcagctatgacggat 8 4 13 1.1.2.4.13.4 BCBC-5A-0 14095538 P205586 Lmo4 ProximalPromoter P205586 ProximalPromoter Unique Tile chr3:144139971-144141022 (-) NM_010723 - 297 144139674 16911 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 MGI:109360 Mm.29187 3 3 H2|3 73.1 cM LMO4 8543 0 caatgctaatgggttttagagcg aagtgagggtgcaattcacaagt 8 4 14 1.1.2.4.14.4 BCBC-5A-0 14095557 P202559 1700108M19Rik ProximalPromoter P202559 ProximalPromoter Unique Tile chr12:36728684-36729747 (-) NM_027699 - 216 36728468 71156 1700108M19Rik 4933421E18Rik|MGC130241|MGC130242 RIKEN cDNA 1700108M19 gene MGI:1920830 Mm.250837 12 12 A3 2 acactcttcaaaggcaagtctgg acctgaaaggaggaaacctcaac 8 4 15 1.1.2.4.15.4 BCBC-5A-0 14095576 P201166 LOC331392 ProximalPromoter P201166 ProximalPromoter Unique Tile chrX:20516852-20517769 (+) NM_198633 + 54 20517823 331392 LOC331392 - similar to Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein) (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Mm.23126 X X A2 0 caaattgtttgggagaggtcttg tggcctcaacgtagttttgattt 8 4 16 1.1.2.4.16.4 BCBC-5A-0 14095595 P200367 Trub1 ProximalPromoter P200367 ProximalPromoter Unique Tile chr19:57505231-57506145 (+) NM_028115;NM_029839; + 32 57506177 72133 Trub1 2610009I02Rik|9030425C13Rik|AI448235|BB118943|C76870|MGC107612 TruB pseudouridine (psi) synthase homolog 1 (E. coli) MGI:1919383 Mm.258404 19 19 D2 TRUB1 142940 0 aatgtggggaaacaaagaagaca aaggccttctgggaattgtagtc 8 4 17 1.1.2.4.17.4 BCBC-5A-0 14095614 P209579 Spats2 ProximalPromoter P209579 ProximalPromoter Unique Tile chr15:98953800-98954855 (+) NM_139140 + 23 98954878 72572 Spats2 2700012F11Rik|59kDa|Scr59|p59 spermatogenesis associated, serine-rich 2 MGI:1919822 Mm.276650 15 15 F1 SPATS2 65244 NM_176835 + 26283 98927517 72778 2810451A06Rik 2 cctgatcagaaccggtaagacac ggtctgggatgaggaaagaagag 8 4 18 1.1.2.4.18.4 BCBC-5A-0 14095633 P208381 1600014E20Rik ProximalPromoter P208381 ProximalPromoter Unique Tile chr2:131551292-131552198 (-) NM_028045 - 104 131551188 71995 1600014E20Rik AA389086|AI426069|AI448024|D19349|MGC117611 RIKEN cDNA 1600014E20 gene MGI:1919245 Mm.22; Mm.23812; Mm.22; Mm.23812; Mm.22; Mm.23812; Mm.22; Mm.23812; Mm.22; Mm.23812; Mm.22; Mm.23812; Mm.22; Mm.23812 2 2 F1 NM_011170 + 49199 131601397 19122 Prnp 0 tgctgtacttagggcaccttctc cttttattaccgatgccttgcag 8 4 19 1.1.2.4.19.4 BCBC-5A-0 14095292 P100102 Cdx2 ProximalPromoter P100102 ProximalPromoter Unique Tile chr5:147618073-147619038 (-) NM_007673 - 475 147617598 12591 Cdx2 Cdx-2 caudal type homeo box 2 MGI:88361 Mm.20358 5 5 G2-G3|5 82.0 cM CDX2 1045 NM_001039678 - 13651 147632689 231903 Urad 2 aagctgcctttgcagacagac gtagagctgcggtgaaggcta 8 5 1 1.1.2.4.1.5 BCBC-5A-0 14095311 P100942 Pole ProximalPromoter P100942 ProximalPromoter Unique Tile chr5:110525237-110526224 (+) NM_011132 + 461 110526685 18973 Pole - polymerase (DNA directed), epsilon MGI:1196391 Mm.35061 5 5 E3-E5|5 56.0 cM POLE 5426 NM_008993 - 83 110526307 19301 Pxmp2 0 tctccctggtcattttctcca cctaaagctctacccggtgct 8 5 2 1.1.2.4.2.5 BCBC-5A-0 14095330 P102064 2310039E09Rik ProximalPromoter P102064 ProximalPromoter Unique Tile chr4:48683778-48684806 (+) NM_026509 + 150 48684656 68016 2310039E09Rik MGC107637 RIKEN cDNA 2310039E09 gene MGI:1915266 Mm.133444 4 4 B2 LOC347273 347273 0 tgggaattaacggtggaacag cgtcttggtcttcatcttccg 8 5 3 1.1.2.4.3.5 BCBC-5A-0 14095349 P102825 Son ProximalPromoter P102825 ProximalPromoter Unique Tile chr16:91536166-91536867 (-) NM_178880;NM_019973; + 129 91536738 20658 Son 2900011L12Rik|AA409051|C81487|mKIAA1019 Son cell proliferation protein MGI:98353 Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401; Mm.396997; Mm.46401 16 16 C3.3|16 64.0 cM SON 6651 NM_010256 - 335 91535831 14450 Gart 0 cagaaaagtctgggaagcgttta tccagcctttgctaaaaactacg 8 5 4 1.1.2.4.4.5 BCBC-5A-0 14095368 P103947 4931420C21Rik ProximalPromoter P103947 ProximalPromoter Unique Tile chr8:70619480-70620490 (-) NM_177698;NM_030263; - 346 70619134 234353 4931420C21Rik AI661273|BC003498|D430018P08|EFA6D|MGC6957 RIKEN cDNA 4931420C21 gene MGI:1918215 Mm.32525 8 8 B3.3 0 agggcttctgcaagaatatttcc gttctctccattcaccagtgctt 8 5 5 1.1.2.4.5.5 BCBC-5A-0 14095387 P106802 Kcna3 DistalPromoter P106802 DistalPromoter Unique Tile chr3:107160987-107163020 (+) NM_008418 + 1458 107164478 16491 Kcna3 Kca1-3|Kv1.3|Mk-3 potassium voltage-gated channel, shaker-related subfamily, member 3 MGI:96660 Mm.30640 3 3 F2.3|3 52.3 cM KCNA3 3738 NM_173787 + 4539 107167559 229694 AI504432 0 ttaaaatcaggcagtagcggtga cgtcatgtttttcttaccccctc 8 5 6 1.1.2.4.6.5 BCBC-5A-0 14095406 P107134 Cpt2 DistalPromoter P107134 DistalPromoter Unique Tile chr4:107422893-107424842 (-) NM_009949 - 1427 107421466 12896 Cpt2 AI323697|CPTII carnitine palmitoyltransferase 2 MGI:109176 Mm.307620 4 4 C7|4 54.4 cM CPT2 1376 NM_028754 + 35058 107387835 74098 0610037L13Rik 0 atggagaatcccagaaaggcata attcaaagctagtgggaaccagg 8 5 7 1.1.2.4.7.5 BCBC-5A-0 14095425 P105825 Foxc2 DistalPromoter P105825 DistalPromoter Unique Tile chr8:123999039-124001110 (+) NM_013519 + 1449 124002559 14234 Foxc2 Fkh14|Hfhbf3|MFH-1|Mfh1 forkhead box C2 MGI:1347481 Mm.14092 8 8 E1|8 65.5 cM FOXC2 2303 NM_172761 - 4683 123994356 234814 Mthfsd 1 gaacgggctagggagctgtagta tcagcatctttgggatcctgtaa 8 5 8 1.1.2.4.8.5 BCBC-5A-0 14095444 P106417 Slc2a2 DistalPromoter P106417 DistalPromoter Unique Tile chr3:28886047-28888005 (+) NM_031197 + 1044 28889049 20526 Slc2a2 AI266973|Glut-2|Glut2 solute carrier family 2 (facilitated glucose transporter), member 2 MGI:1095438 Mm.18443 3 3 A3|3 14.4 cM SLC2A2 6514 0 gaaagaggcctcagagtcagacc gaacatgaaggtcggaaggaaac 8 5 9 1.1.2.4.9.5 BCBC-5A-0 14095463 P201829 Vps18 ProximalPromoter P201829 ProximalPromoter Unique Tile chr2:118978879-118979962 (+) NM_172269 + 235 118980197 228545 Vps18 9930024E13Rik|MGC36479 vacuolar protein sorting 18 (yeast) MGI:2443626 Mm.294761 2 2 E5 VPS18 57617 NM_145530 - 16217 118962662 228543 Rhov 0 ctgagccatgagagagttcgttt agctcagacttcactccctcaga 8 5 10 1.1.2.4.10.5 BCBC-5A-0 14095482 P206171 Ms4a2 ProximalPromoter P206171 ProximalPromoter Unique Tile chr19:11690992-11691891 (-) NM_013516 - 304 11690688 14126 Ms4a2 Fce1b|Fcer1b|Ms4a1 membrane-spanning 4-domains, subfamily A, member 2 MGI:95495 Mm.329735 19 19 A|19 8.0 cM MS4A2 2206 NM_133246 - 15921 11707812 170813 Ms4a3 0 tctgctccatgttgtgatcagtt agagcagaagaaaaagcaagggt 8 5 11 1.1.2.4.11.5 BCBC-5A-0 14095501 P205666 Nedd4 ProximalPromoter P205666 ProximalPromoter Unique Tile chr9:72459992-72461076 (+) NM_010890 + 163 72460913 17999 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|Nedd4-1|Nedd4a|mKIAA0093 neural precursor cell expressed, developmentally down-regulted gene 4 MGI:97297 Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067; Mm.279923; Mm.401629; Mm.405067 9 9 D|9 40.0 cM NEDD4 4734 NM_001039251 + 29040 72490116 639396 LOC639396 1 ccaattgctcacacctatcaaca agaccgagagagaaggagagagg 8 5 12 1.1.2.4.12.5 BCBC-5A-0 14095520 P203694 Vapb ProximalPromoter P203694 ProximalPromoter Unique Tile chr2:173379295-173380310 (+) NM_019806 + 199 173380509 56491 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C MGI:1928744 Mm.260456 2 2 H3|2 103.0 cM VAPB 9217 0 atggagcagtgggtgactatgat agtgagactgttcagtaagcgcc 8 5 13 1.1.2.4.13.5 BCBC-5A-0 14095539 P205611 Matn1 ProximalPromoter P205611 ProximalPromoter Unique Tile chr4:130215537-130216592 (+) NM_010769 + 93 130216499 17180 Matn1 CMP|Crtm|Mat1|matrilin-1 matrilin 1, cartilage matrix protein 1 MGI:106591 Mm.271796 4 4 D2.3|4 61.0 cM MATN1 4146 NM_010686 + 8329 130207208 16792 Laptm5 0 gtatgtggggtgtgaaggatgat gacaagactgaggctatcaggga 8 5 14 1.1.2.4.14.5 BCBC-5A-0 14095558 P202584 Ankmy2 ProximalPromoter P202584 ProximalPromoter Unique Tile chr12:36666322-36667312 (+) NM_146033;NM_178910; + 111 36667423 217473 Ankmy2 AI035571|MGC18754|ZMYND20 ankyrin repeat and MYND domain containing 2 MGI:2144755 Mm.130422 12 12 A3 ANKMY2 57037 NM_025840 - 297 36667015 66912 Bzw2 0 gcctaccctccctagttccataa catttggaaggggattcaataca 8 5 15 1.1.2.4.15.5 BCBC-5A-0 14095577 P201191 5730590G19Rik ProximalPromoter P201191 ProximalPromoter Unique Tile chr7:79567051-79567986 (+) NM_029835 + 34278 79533708 77011 5730590G19Rik BC028450|Lrrk1 RIKEN cDNA 5730590G19 gene MGI:1924261 Mm.28132 7 7 D2 NM_175640 - 37698 79605684 103968 Plin 0 gggagagggaacaggtcactatt attctctgtggggttctaggagg 8 5 16 1.1.2.4.16.5 BCBC-5A-0 14095596 P200300 Yipf4 ProximalPromoter P200300 ProximalPromoter Unique Tile chr17:74393163-74394250 (+) NM_026417 + 245 74394495 67864 Yipf4 2310034L04Rik Yip1 domain family, member 4 MGI:1915114 Mm.41891 17 17 E3 YIPF4 84272 NM_001033367 - 29073 74364090 268973 Card12 2 ggtatggcacatgtacacaggaa agcttagtcgtttgatggctcac 8 5 17 1.1.2.4.17.5 BCBC-5A-0 14095615 P209603 Dennd4b ProximalPromoter P209603 ProximalPromoter Unique Tile chr3:90378006-90378951 (+) NM_201407 + 25564 90353387 229541 Dennd4b BC026996|mKIAA0476 DENN/MADD domain containing 4B MGI:2446201 Mm.30571 3 3 F1 DENND4B 9909 NM_028881 + 37739 90340267 74343 Crtc2 0 agttgctgtctacctttggcaag ctggagaagtagtgattggcgtt 8 5 18 1.1.2.4.18.5 BCBC-5A-0 14095634 P208405 2610507L03Rik ProximalPromoter P208405 ProximalPromoter Unique Tile chr7:35104917-35105980 (+) NM_028120 + 128 35105852 72140 2610507L03Rik - RIKEN cDNA 2610507L03 gene MGI:1919390 Mm.133263 7 7 B2 NM_178643 - 453 35105370 101831 C230052I12Rik 0 ctctctcttttaacgtgctggga ctggaactactcacgaactggct 8 5 19 1.1.2.4.19.5 BCBC-5A-0 14095293 P100126 Dmbt1 ProximalPromoter P100126 ProximalPromoter Unique Tile chr7:130822083-130823118 (+) NM_007769 + 105 130823223 12945 Dmbt1 CRP|CRP-[a]|CRP-[b]|Crpd|DBMT1|MUCLIN|ebnerin|gp300|hensin deleted in malignant brain tumors 1 MGI:106210 Mm.4138 7 7 F4 DMBT1 1755 0 tgatggtgcaatcctgtgaag acggaagtggggaactttgtt 8 6 1 1.1.2.4.1.6 BCBC-5A-0 14095312 P101248 Gcat ProximalPromoter P101248 ProximalPromoter Unique Tile chr15:78856839-78857803 (+) NM_013847 + 325 78858128 26912 Gcat AI526977|Kbl glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase) MGI:1349389 Mm.237085 15 15 E1|15 46.6 cM GCAT 23464 NM_008197 + 1108 78855731 14958 H1f0 0 tgtgtttcagtcggtggtttg atcgctcctctctcctccagt 8 6 2 1.1.2.4.2.6 BCBC-5A-0 14095331 P102088 Gabarapl2 ProximalPromoter P102088 ProximalPromoter Unique Tile chr8:114826339-114827337 (+) NM_026693 + 53 114827390 93739 Gabarapl2 0610012F20Rik|2900019O08Rik|AI173605|GATE-16|Gef2|MGC102013 gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2 MGI:1890602 Mm.273768; Mm.371666; Mm.273768; Mm.371666; Mm.273768; Mm.371666; Mm.273768; Mm.371666; Mm.273768; Mm.371666; Mm.273768; Mm.371666; Mm.273768; Mm.371666; Mm.273768; Mm.371666; Mm.273768; Mm.371666; Mm.273768; Mm.371666; Mm.273768; Mm.371666; Mm.273768; Mm.371666 8 8 E1 GABARAPL2 11345 NM_001033321 - 5875 114820464 234740 4932417I16Rik 0 ctccatcacttgggtcctcag gggcctggtaagagcttcagt 8 6 3 1.1.2.4.3.6 BCBC-5A-0 14095350 P102849 Hdac6 ProximalPromoter P102849 ProximalPromoter Unique Tile chrX:7104454-7105430 (-) NM_010413 - 242 7104696 15185 Hdac6 Hdac5|Sfc6|mHDA2 histone deacetylase 6 MGI:1333752 Mm.29854 X X A1.1|X 2.0 cM HDAC6 10013 NM_181548 - 18888 7085566 353283 Eras 0 tgccaccagccaaagtctattat caggctcaatcaggctcttctta 8 6 4 1.1.2.4.4.6 BCBC-5A-0 14095369 P103971 Dbr1 ProximalPromoter P103971 ProximalPromoter Unique Tile chr9:99384097-99385052 (+) NM_031403 + 98 99385150 83703 Dbr1 AW018415 debranching enzyme homolog 1 (S. cerevisiae) MGI:1931520 Mm.31324 9 9 F1 DBR1 51163 NM_028768 - 5846 99378251 74125 Armc8 0 tgcagagggaagcagaaattaag gagaccctgtctgtcttcgtgat 8 6 5 1.1.2.4.5.6 BCBC-5A-0 14095388 P106745 Cyp4f18 DistalPromoter P106745 DistalPromoter Unique Tile chr8:74961175-74963117 (+) NM_024444 - 22569 74938606 72054 Cyp4f18 1810054N16Rik|Cypf18 cytochrome P450, family 4, subfamily f, polypeptide 18 MGI:1919304 Mm.160020 8 8 C1 CYP4F3 4051 NM_146539;NM_207555; + 23553 74986670 258532; 404315 Olfr373; Olfr372 0 aattttcataatggcatggtccc atatgccatggctggttgatatg 8 6 6 1.1.2.4.6.6 BCBC-5A-0 14095407 P107156 Ddx3x DistalPromoter P107156 DistalPromoter Unique Tile chrX:12435040-12437123 (+) NM_010028 + 873 12437996 13205 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked MGI:103064 Mm.289662 X X A1.1|X 42.0 cM DDX3X 1654 2 ttgccgtggtcatagtgtttctt ttattgtaggcccctgtgtcctt 8 6 7 1.1.2.4.7.6 BCBC-5A-0 14095426 P105847 Pklr DistalPromoter P105847 DistalPromoter Unique Tile chr3:89219110-89221096 (+) NM_013631 + 972 89222068 18770 Pklr Pk-1|Pk1 pyruvate kinase liver and red blood cell MGI:97604 Mm.383180 3 3 F1|3 44.0 cM PKLR 5313 NM_008227 - 24932 89246028 15168 Hcn3 0 tctaagtgtggacaccctggaaa ccctagactggggattctcttga 8 6 8 1.1.2.4.8.6 BCBC-5A-0 14095445 P106439 Aipl1 DistalPromoter P106439 DistalPromoter Unique Tile chr11:71854728-71856487 (-) NM_053245 - 1024 71853704 114230 Aipl1 A930007I01Rik|MGC25485 aryl hydrocarbon receptor-interacting protein-like 1 MGI:2148800 Mm.95707 11 11 B4 AIPL1 23746 NM_144526 + 2209 71858696 109212 6720460F02Rik 0 gtgcttctcaacctgcttgtgtt gtagaaagctctccctgagtgcc 8 6 9 1.1.2.4.9.6 BCBC-5A-0 14095464 P203304 Tcirg1 ProximalPromoter P203304 ProximalPromoter Unique Tile chr19:3905162-3906260 (-) NM_016921 - 68 3905230 27060 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 MGI:1350931 Mm.271689 19 19 A|19 6.0 cM TCIRG1 10312 NM_144870 - 6457 3912717 225887 Ndufs8 2 tggtggtagcacaagcctttaat gttttcagcactggatcacctct 8 6 10 1.1.2.4.10.6 BCBC-5A-0 14095483 P206195 Itga3 ProximalPromoter P206195 ProximalPromoter Unique Tile chr11:94897066-94898151 (-) NM_013565 - 4262 94892804 16400 Itga3 AA407068|CD49C integrin alpha 3 MGI:96602 Mm.57035 11 11 D|11 56.0 cM ITGA3 3675 NM_010055 + 38073 94936224 13393 Dlx3 2 tgccataggcagtagaaggagac atacacatgacttgggagggaga 8 6 11 1.1.2.4.11.6 BCBC-5A-0 14095502 P205690 Gpr143 ProximalPromoter P205690 ProximalPromoter Unique Tile chrX:148121678-148122720 (+) NM_010951 + 19 148122701 18241 Gpr143 Oa1 G protein-coupled receptor 143 MGI:107193 Mm.5157 X X F2-F3|X 65.0 cM GPR143 4935 0 tttgtggccctattagtcaagga cacagctttcagcttttcctgat 8 6 12 1.1.2.4.12.6 BCBC-5A-0 14095521 P203718 Baiap2l2 ProximalPromoter P203718 ProximalPromoter Unique Tile chr15:79112888-79113829 (-) NM_177580 - 186 79112702 207495 Baiap2l2 BC048937|MGC56984 BAI1-associated protein 2-like 2 MGI:2652819 Mm.309647 15 15 E1 BAIAP2L2 80115 NM_020516 - 30885 79082003 57274 Slc16a8 0 tgaaggacaactgactccatcaa gacctgcccctcaattatttacc 8 6 13 1.1.2.4.13.6 BCBC-5A-0 14095540 P205543 Kap ProximalPromoter P205543 ProximalPromoter Unique Tile chr6:133819489-133820479 (-) NM_010594 - 126 133819363 16483 Kap AW146435|FKSG22 kidney androgen regulated protein MGI:96653 Mm.13052 6 6 G1|6 63.7 cM 0 cttgagaggcagatggacttgat ttaaagaatgcacccagaaggaa 8 6 14 1.1.2.4.14.6 BCBC-5A-0 14095559 P202608 Nt5dc1 ProximalPromoter P202608 ProximalPromoter Unique Tile chr10:34108178-34109172 (-) NM_176968 - 234 34107944 319638 Nt5dc1 6030401B09Rik|AW987726|MGC107414|Nt5c2l1 5'-nucleotidase domain containing 1 MGI:2442446 Mm.73467 10 10 B1 NT5DC1 221294 NM_009925 + 28928 34079250 12813 Col10a1 1 tgtgagcatccacttctgtgttt tgcttccagctagtacagtgcag 8 6 15 1.1.2.4.15.6 BCBC-5A-0 14095578 P201216 Apex2 ProximalPromoter P201216 ProximalPromoter Unique Tile chrX:145929091-145930157 (-) NM_029943 - 226 145928865 77622 Apex2 C430040P13Rik|ape2 apurinic/apyrimidinic endonuclease 2 MGI:1924872 Mm.34884 X X F2 APEX2 27301 NM_008824 + 479 145930636 18639 Pfkfb1 2 ctgtgaaattctgagggtgtgtg catagcaagacccagaccaaaac 8 6 16 1.1.2.4.16.6 BCBC-5A-0 14095597 P200325 Crsp9 ProximalPromoter P200325 ProximalPromoter Unique Tile chr11:46279143-46280224 (+) NM_025426 + 172 46280396 66213 Crsp9 1110063B05Rik|Crsp33 cofactor required for Sp1 transcriptional activation, subunit 9 MGI:1913463 Mm.24159 11 11 B1.2 CRSP9 9443 NM_134250 + 18133 46298357 171285 Havcr2 0 ggattccaacatggactgaagac gtttcttggtcaggtcaggagaa 8 6 17 1.1.2.4.17.6 BCBC-5A-0 14095616 P208550 P2ry13 ProximalPromoter P208550 ProximalPromoter Unique Tile chr3:59298843-59299855 (-) NM_028808 - 32 59298811 74191 P2ry13 2010001L06Rik|GPCR1|GPR94|Gpr86|P2Y13|SP174 purinergic receptor P2Y, G-protein coupled 13 MGI:1921441 Mm.90067 3 3 D P2RY13 53829 NM_027571 - 15573 59315428 70839 P2ry12 0 ctttctgcacactccctgagatt actgcttttccttcctcatttcc 8 6 18 1.1.2.4.18.6 BCBC-5A-0 14095635 P208429 Setd3 ProximalPromoter P208429 ProximalPromoter Unique Tile chr12:108627277-108628191 (-) NM_028262 - 207 108627070 52690 Setd3 2610305M23Rik|D12Ertd771e SET domain containing 3 MGI:1289184 Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198; Mm.159185; Mm.354198 12 12 F1|12 53.0 cM SETD3 84193 NM_009832 + 372 108627649 12454 Ccnk 0 caaacaagcactcaggagaggat atccgaagactcgattggttaga 8 6 19 1.1.2.4.19.6 BCBC-5A-0 14095294 P100150 Dhcr7 ProximalPromoter P100150 ProximalPromoter Unique Tile chr7:143638083-143639000 (+) NM_007856 + 640 143639640 13360 Dhcr7 AA409147 7-dehydrocholesterol reductase MGI:1298378 Mm.249342 7 7 F5 DHCR7 1717 NM_030221 - 5852 143632231 78914 Nadsyn1 0 catgggtgttttgttcccact tgcagccacaatgaatcaaac 8 7 1 1.1.2.4.1.7 BCBC-5A-0 14095313 P101272 Actr1a ProximalPromoter P101272 ProximalPromoter Unique Tile chr19:46448654-46449605 (+) NM_016860 - 383 46449037 54130 Actr1a Arp1|alpha-Arp1 ARP1 actin-related protein 1 homolog A (yeast) MGI:1858964 Mm.3118 19 19 C3 ACTR1A 10121 NM_015752;NM_001025391; + 623 46450228 24069 Sufu 0 gtcgggctctaagagaacggt ttttcgggacagggtttttct 8 7 2 1.1.2.4.2.7 BCBC-5A-0 14095332 P102022 1200011I18Rik ProximalPromoter P102022 ProximalPromoter Unique Tile chr14:74845607-74846665 (-) NM_026177 - 637 74844970 67467 1200011I18Rik - RIKEN cDNA 1200011I18 gene MGI:1914717 Mm.260767 14 14 D2 KIAA1704 55425 NM_013745 + 533 74845074 27275 Nufip1 0 aatccctgtgaacgggttctt cactaggtttcctgccacctg 8 7 3 1.1.2.4.3.7 BCBC-5A-0 14095351 P102873 Hoxb8 ProximalPromoter P102873 ProximalPromoter Unique Tile chr11:96096571-96097546 (+) NM_010461 + 448 96097994 15416 Hoxb8 Hox-2.4 homeo box B8 MGI:96189 Mm.4822 11 11 D|11 56.01 cM HOXB8 3218 NM_010460 + 5189 96102735 15415 Hoxb7 0 tacttcagaaggccgagtgaaac tttctgtggaaagggagtctgag 8 7 4 1.1.2.4.4.7 BCBC-5A-0 14095370 P103995 Pip5k2c ProximalPromoter P103995 ProximalPromoter Unique Tile chr10:126614832-126615721 (-) NM_054097 - 339 126614493 117150 Pip5k2c - phosphatidylinositol-4-phosphate 5-kinase, type II, gamma MGI:2152214 Mm.22682 10 10 D3 PIP5K2C 79837 NM_030714 - 16174 126598658 80904 Dtx3 1 tttgcttcaaccagaggagaatc tttgggtattacggaagtgagga 8 7 5 1.1.2.4.5.7 BCBC-5A-0 14095389 P106766 Hn1 DistalPromoter P106766 DistalPromoter Unique Tile chr11:115331504-115333358 (-) NM_008258 - 1044 115330460 15374 Hn1 - hematological and neurological expressed sequence 1 MGI:1096361 Mm.1775 11 11 E2|11 70.0 cM HN1 51155 NM_133354 - 18874 115352232 170930 Sumo2 1 gctttcacctaaggctttgccta cacaacgtaaatcttttgccagg 8 7 6 1.1.2.4.6.7 BCBC-5A-0 14095408 P107256 Irs1 DistalPromoter P107256 DistalPromoter Unique Tile chr1:82170641-82172680 (-) NM_010570 - 201 82170440 16367 Irs1 G972R|IRS-1 insulin receptor substrate 1 MGI:99454 Mm.395683; Mm.4952; Mm.395683; Mm.4952; Mm.395683; Mm.4952; Mm.395683; Mm.4952; Mm.395683; Mm.4952; Mm.395683; Mm.4952; Mm.395683; Mm.4952; Mm.395683; Mm.4952; Mm.395683; Mm.4952; Mm.395683; Mm.4952 1 1 C5|1 57.0 cM IRS1 3667 NM_029777 + 46662 82219342 76867 Rhbdd1 1 tgttcttggttggtgacagaggt ctctccctgctcgctctacattc 8 7 7 1.1.2.4.7.7 BCBC-5A-0 14095427 P105868 Hsd17b9 DistalPromoter P105868 DistalPromoter Unique Tile chr10:127401937-127403689 (-) NM_013786 - 8520 127410457 27400 Hsd17b9 17betaHSD9|Rdh8 hydroxysteroid (17-beta) dehydrogenase 9 MGI:1351670 Mm.26719 10 10 D3 HSD17B6 8630 NM_008921 + 14435 127418124 19075 Prim1 0 aatctgagggagaaactgttggc cacggcttctcaggctaactaca 8 7 8 1.1.2.4.8.7 BCBC-5A-0 14095446 P106461 Cyp2a12 DistalPromoter P106461 DistalPromoter Unique Tile chr7:26734744-26736706 (+) NM_133657 + 1143 26737849 13085 Cyp2a12 - cytochrome P450, family 2, subfamily a, polypeptide 12 MGI:105055 Mm.20770 7 7 A3 2 tgtgtcctggattttctggatgt tggtgtcacacacctttaatccc 8 7 9 1.1.2.4.9.7 BCBC-5A-0 14095465 P203328 Mst1 ProximalPromoter P203328 ProximalPromoter Unique Tile chr9:107937605-107938531 (+) NM_008243 + 20 107938551 15235 Mst1 D3F15S2h|D9H3F15S2|DNF15S2h|Hgfl macrophage stimulating 1 (hepatocyte growth factor-like) MGI:96080 Mm.8369 9 9 F2|9 60.0 cM MST1 4485 NM_032543 - 203 107937402 84585 Rnf123 0 gggactatgttctaatcggtccc aaatggtgaaatctgtcccttca 8 7 10 1.1.2.4.10.7 BCBC-5A-0 14095484 P206129 Rpl8 ProximalPromoter P206129 ProximalPromoter Unique Tile chr15:76730148-76731237 (+) NM_012053 + 116 76731353 26961 Rpl8 - ribosomal protein L8 MGI:1350927 Mm.30066 15 15 E1 RPL8 6132 NM_025536 + 2918 76727230 66398 Commd5 0 tctgggctgactcaactccttac cctgtgtgtctaccaaattgctg 8 7 11 1.1.2.4.11.7 BCBC-5A-0 14095503 P205714 Pfn1 ProximalPromoter P205714 ProximalPromoter Unique Tile chr11:70471071-70472010 (-) NM_011072 - 241 70470830 18643 Pfn1 Pfn profilin 1 MGI:97549 Mm.2647 11 11 B4|11 42.0 cM PFN1 5216 NM_007933 + 1980 70473990 13808 Eno3 0 aagtacttccactgggagaggct ttcatcctgaataccacttggct 8 7 12 1.1.2.4.12.7 BCBC-5A-0 14095522 P203742 Waspip ProximalPromoter P203742 ProximalPromoter Unique Tile chr2:73330511-73331581 (-) NM_153138 - 262 73330249 215280 Waspip AI115543|D2Ertd120e|WIP Wiskott-Aldrich syndrome protein interacting protein MGI:2178801 Mm.223504 2 2 C3|2 43.0 cM WASPIP 7456 NM_007389 - 49564 73381145 11435 Chrna1 0 agattcccagcatctacgtggta gacctggaagggatacccaac 8 7 13 1.1.2.4.13.7 BCBC-5A-0 14095541 P205567 Krt17 ProximalPromoter P205567 ProximalPromoter End Repeat Tile chr11:100077341-100078388 (-) NM_010663 - 262 100077079 16667 Krt17 K17|Krt1-17 keratin 17 MGI:96691 Mm.14046 11 11 D|11 58.7 cM KRT17 3872 NM_212483 - 7573 100085961 68239 Krt42 1 ggcagtctgaaacaagacctcat gtgtgtgtgtgtgtgtgtgtgtg 8 7 14 1.1.2.4.14.7 BCBC-5A-0 14095560 P206414 Cldn1 ProximalPromoter P206414 ProximalPromoter Unique Tile chr16:26287059-26288061 (-) NM_016674 - 82 26287141 12737 Cldn1 AI596271 claudin 1 MGI:1276109 Mm.289441 16 16 B2 CLDN1 9076 0 ttctcctggaagagaatgtggag atggggtctctgcaaacaagtta 8 7 15 1.1.2.4.15.7 BCBC-5A-0 14095579 P201240 9130230L23Rik ProximalPromoter P201240 ProximalPromoter Unique Tile chr5:66283633-66284574 (-) NM_177679 - 213 66283420 231253 9130230L23Rik - RIKEN cDNA 9130230L23 gene MGI:3041166 Mm.235103 5 5 C3.1 1 aggaacagggaaatgagccttac tcccaagatacacaaaggaggaa 8 7 16 1.1.2.4.16.7 BCBC-5A-0 14095598 P200349 Atg4b ProximalPromoter P200349 ProximalPromoter Unique Tile chr1:95584243-95585192 (+) NM_174874 + 220 95585412 66615 Atg4b 2510009N07Rik|Apg4b|Atg4bl|Autl1 autophagy-related 4B (yeast) MGI:1913865 Mm.29087 1 1 D ATG4B 23192 NM_025920 - 52 95585244 67026 Thap4 2 atcacaggagaggaccaactgag catctttccgtacagacagccac 8 7 17 1.1.2.4.17.7 BCBC-5A-0 14095617 P208574 4933405A16Rik ProximalPromoter P208574 ProximalPromoter Unique Tile chr3:131332473-131333389 (-) NM_028943 - 1610 131334083 74442 4933405A16Rik AI854299 RIKEN cDNA 4933405A16 gene MGI:1921692 Mm.273360 3 3 G3 MGC26963 166929 NM_027816 - 40091 131292382 71519 Cyp2u1 1 cacacacacacacacacgagatt gggtaacctcctaaaattgccac 8 7 18 1.1.2.4.18.7 BCBC-5A-0 14095636 P208363 Itfg1 ProximalPromoter P208363 ProximalPromoter Unique Tile chr8:88731159-88732138 (-) NM_028007 - 145 88731014 71927 Itfg1 2310047C21Rik|AI314457|Cda08|D8Wsu49e integrin alpha FG-GAP repeat containing 1 MGI:106419 Mm.334685 8 8 C4|8 39.0 cM ITFG1 81533 NM_199446 + 53 88731106 102093 Phkb 0 tgtgtttgttccattacaaccct tgaagtaagctggaagctcttgg 8 7 19 1.1.2.4.19.7 BCBC-5A-0 14095295 P100174 Ercc1 ProximalPromoter P100174 ProximalPromoter Unique Tile chr7:18501903-18502983 (+) NM_007948 + 639 18503622 13870 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 MGI:95412 Mm.280913 7 7 A3|7 4.0 cM ERCC1 2067 NM_145822 - 14958 18517941 70333 Cd3eap 0 gttcagggtcttgctttgtgg agtttcaccccgttccaactt 8 8 1 1.1.2.4.1.8 BCBC-5A-0 14095314 P101296 Mpp2 ProximalPromoter P101296 ProximalPromoter Unique Tile chr11:101904444-101905389 (-) NM_016695 - 148 101904592 50997 Mpp2 D11Bwg0652e|Dlg2|Dlgh2|Pals4 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) MGI:1858257 Mm.36242 11 11 D MPP2 4355 NM_008918 - 11996 101917385 19064 Ppy 0 acttggggccaccaatagtct tgataggtcgaaaaggaggca 8 8 2 1.1.2.4.2.8 BCBC-5A-0 14095333 P102046 Snx2 ProximalPromoter P102046 ProximalPromoter Unique Tile chr18:53300559-53301496 (+) NM_026386 + 237 53301733 67804 Snx2 0610030A03Rik sorting nexin 2 MGI:1915054 Mm.252171 18 18 D1 SNX2 6643 2 taccccaggcaagtgctctaa gtccttgcctacatgctgacc 8 8 3 1.1.2.4.3.8 BCBC-5A-0 14095352 P103179 Polk ProximalPromoter P103179 ProximalPromoter Unique Tile chr13:97643190-97644234 (-) NM_012048 - 6 97643184 27015 Polk Dinb1 polymerase (DNA directed), kappa MGI:1349767 Mm.89926 13 13 D1 POLK 51426 NM_023420 + 254 97643444 68018 Col4a3bp 2 atacaagctttccaaggtcctcc agttgcctaggattgcgactaca 8 8 4 1.1.2.4.4.8 BCBC-5A-0 14095371 P104019 Atp6v1c2 ProximalPromoter P104019 ProximalPromoter Unique Tile chr12:17350468-17351538 (-) NM_133699 - 276 17350192 68775 Atp6v1c2 1110038G14Rik ATPase, H+ transporting, lysosomal V1 subunit C2 MGI:1916025 Mm.178798 12 12 A3 ATP6V1C2 245973 NM_001008421 + 22434 17373972 217431 Nol10 0 tagttctggctgtcctggaactc ctccatccgcagaacagaaatac 8 8 5 1.1.2.4.5.8 BCBC-5A-0 14095390 P106788 Htf9c DistalPromoter P106788 DistalPromoter Unique Tile chr16:18158782-18160790 (+) NM_008307 + 1451 18162241 15547 Htf9c - HpaII tiny fragments locus 9c MGI:96270 Mm.271798 16 16 A3|16 10.9 cM HTF9C 27037 NM_011239 - 1475 18162265 19385 Ranbp1 0 tcttcaaggttttgtccctcctc aagagtggacaggaagcaggtct 8 8 6 1.1.2.4.6.8 BCBC-5A-0 14095409 P107277 Klf4 DistalPromoter P107277 DistalPromoter Unique Tile chr4:55554778-55556654 (-) NM_010637 - 1212 55553566 16600 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) MGI:1342287 Mm.4325 4 4 B3|4 19.7 cM KLF4 9314 0 cctagcttttaacccagggcttt aaaccgtgagtgtggtgttcagt 8 8 7 1.1.2.4.7.8 BCBC-5A-0 14095428 P105812 Atp1b2 DistalPromoter P105812 DistalPromoter Unique Tile chr11:69423105-69425259 (-) NM_013415 - 950 69422155 11932 Atp1b2 Amog|Atpb-2 ATPase, Na+/K+ transporting, beta 2 polypeptide MGI:88109 Mm.235204 11 11 B3|11 40.0 cM ATP1B2 482 NM_011367 - 8804 69434063 20415 Shbg 2 atggaggcagattccaaaagaag tcgaaggagaaggagaaggagaa 8 8 8 1.1.2.4.8.8 BCBC-5A-0 14095447 P106482 DistalPromoter P106482 DistalPromoter No Hits Tile 1 ctgttcctggttgagctagggat agagctgcttctcttcggcttac 8 8 9 1.1.2.4.9.8 BCBC-5A-0 14095466 P203352 Pthr1 ProximalPromoter P203352 ProximalPromoter End Repeat Tile chr9:110591857-110592912 (-) NM_011199 - 81 110591938 19228 Pthr1 PPR|PTH1R|Pthr parathyroid hormone receptor 1 MGI:97801 Mm.3542 9 9 F|9 58.0 cM PTHR1 5745 NM_010859 + 15581 110608493 17897 Myl3 1 tgtgtgtgtgtgtgtgtgtgtgt ggaacttcagagaggtgtctcca 8 8 10 1.1.2.4.10.8 BCBC-5A-0 14095485 P206153 Bcl2l10 ProximalPromoter P206153 ProximalPromoter Unique Tile chr9:75132473-75133527 (+) NM_013479 + 152 75133679 12049 Bcl2l10 AA420380|AU023065|Boo|C85687|Diva Bcl2-like 10 MGI:1330841 Mm.25988 9 9 D BCL2L10 10017 NM_138719;NM_010313; + 32323 75100150 14697 Gnb5 0 aactgaaatatagccccagctcc aattggcctacttgtttgggaat 8 8 11 1.1.2.4.11.8 BCBC-5A-0 14095504 P204083 Chrna7 ProximalPromoter P204083 ProximalPromoter Unique Tile chr7:63091757-63092769 (-) NM_007390 - 294 63091463 11441 Chrna7 Acra7|alpha7 cholinergic receptor, nicotinic, alpha polypeptide 7 MGI:99779 Mm.113464; Mm.221693; Mm.113464; Mm.221693; Mm.113464; Mm.221693; Mm.113464; Mm.221693; Mm.113464; Mm.221693; Mm.113464; Mm.221693; Mm.113464; Mm.221693 7 7 C|7 30.0 cM CHRNA7 1139 0 gcttccccttctctgatgttttt ttctccagccagacaaggtagac 8 8 12 1.1.2.4.12.8 BCBC-5A-0 14095523 P203766 Tek ProximalPromoter P203766 ProximalPromoter Unique Tile chr4:94230140-94231096 (+) NM_013690 + 216 94231312 21687 Tek Cd202b|Hyk|Tie2 endothelial-specific receptor tyrosine kinase MGI:98664 Mm.14313 4 4 C5|4 43.6 cM TEK 7010 0 ctcaagatcagccctgaagtgat gcacttgctctcctgtttttgtt 8 8 13 1.1.2.4.13.8 BCBC-5A-0 14095542 P205592 Ly6a ProximalPromoter P205592 ProximalPromoter Unique Tile chr15:74825390-74826383 (-) NM_010738 - 247 74825143 110454 Ly6a Ly-6A.2|Ly-6A/E|Ly-6E.1|Sca-1|Sca1|TAP lymphocyte antigen 6 complex, locus A MGI:107527 Mm.425949 15 15 D3|15 42.7 cM NM_020498 - 14783 74810607 57248 Ly6i 2 ttcctgtaagtgacctcacccat ttgacttgtgcttgccaattaga 8 8 14 1.1.2.4.14.8 BCBC-5A-0 14095561 P206440 ProximalPromoter P206440 ProximalPromoter No Hits Tile 0 accagccagtctccaaaatatga gaaacaaaaggttagtcgcgttg 8 8 15 1.1.2.4.15.8 BCBC-5A-0 14095580 P201173 Apbb2 ProximalPromoter P201173 ProximalPromoter Unique Tile chr5:66897877-66898915 (-) NM_009686 - 71 66897806 11787 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 MGI:108405 Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159; Mm.392114; Mm.406391; Mm.5159 5 5 C3.1 APBB2 323 0 tactgctgggctgtaaacatgaa cagcgagattccacttctccag 8 8 16 1.1.2.4.16.8 BCBC-5A-0 14095599 P200373 6330577E15Rik ProximalPromoter P200373 ProximalPromoter Unique Tile chr19:47784071-47785152 (+) NM_026377 + 76 47785076 67788 6330577E15Rik - RIKEN cDNA 6330577E15 gene MGI:1915038 Mm.181610 19 19 D2 C10orf78 119392 NM_007732 - 38666 47745405 12821 Col17a1 1 cccaagctagttcattttgctgt ccagggagaaagctcagtacctt 8 8 17 1.1.2.4.17.8 BCBC-5A-0 14095618 P208598 Tlk1 ProximalPromoter P208598 ProximalPromoter Unique Tile chr2:70624393-70625313 (-) NM_172664 - 1926 70626319 228012 Tlk1 4930545J15Rik tousled-like kinase 1 MGI:2441683 Mm.136511 2 2 C2 TLK1 9874 0 cagggaagaataaatttgcatcg agctagggctgaccttccttaga 8 8 18 1.1.2.4.18.8 BCBC-5A-0 14095637 P208387 Trmu ProximalPromoter P208387 ProximalPromoter Unique Tile chr15:85705984-85706946 (+) NM_028063 + 146 85707092 72026 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase MGI:1919276 Mm.158211 15 15 E2 TRMU 55687 NM_013882 + 18243 85687741 29870 Gtse1 0 tgtctaagggccaatctaatgga cagataggccagcgatgagtt 8 8 19 1.1.2.4.19.8 BCBC-5A-0 14095296 P100480 Rgl2 ProximalPromoter P100480 ProximalPromoter Unique Tile chr17:33539590-33540599 (+) NM_009059 + 252 33540347 19732 Rgl2 KE1.5|Rab2l|Rgt2|Rlf ral guanine nucleotide dissociation stimulator-like 2 MGI:107483 Mm.43777 17 17 B2 RGL2 5863 NM_001025313;NM_009318; + 9461 33530129 21356 Tapbp 1 tccagctctccattcctacca gagatacgggagtggggaaac 8 9 1 1.1.2.4.1.9 BCBC-5A-0 14095315 P101320 Atp5b ProximalPromoter P101320 ProximalPromoter Unique Tile chr10:127485045-127485959 (+) NM_016774 + 296 127486255 11947 Atp5b - ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit MGI:107801 Mm.238973 10 10 D3 ATP5B 506 NM_019766 + 23008 127462037 56351 Ptges3 0 aggatatgggtgcgttccttt gtgcactaggccgtctttgac 8 9 2 1.1.2.4.2.9 BCBC-5A-0 14095334 P102070 2700060E02Rik ProximalPromoter P102070 ProximalPromoter Unique Tile chr14:18615027-18616062 (-) NM_026528 - 508 18614519 68045 2700060E02Rik - RIKEN cDNA 2700060E02 gene MGI:1915295 Mm.21932 14 14 A3 C14orf166 51637 0 agccagtctgtcctgctcatc aacctgcgtttccttctcctc 8 9 3 1.1.2.4.3.9 BCBC-5A-0 14095353 P103203 Emg1 ProximalPromoter P103203 ProximalPromoter Unique Tile chr6:124678058-124678966 (-) NM_013536 - 312 124677746 14791 Emg1 C2f|Grcc2f EMG1 nucleolar protein homolog (S. cerevisiae) MGI:1315195 Mm.6390 6 6 F2|6 60.22 cM EMG1 10436 NM_007531 + 104 124677954 12034 Phb2 1 cccttttatgctaggcagaaggt ggcccagaacttgaaggacttag 8 9 4 1.1.2.4.4.9 BCBC-5A-0 14095372 P103953 Maged2 ProximalPromoter P103953 ProximalPromoter Unique Tile chrX:146154873-146155851 (-) NM_030700 - 125 146154998 80884 Maged2 Mage-d2|ORF1 melanoma antigen, family D, 2 MGI:1933391 Mm.22575 X X F2 MAGED2 10916 0 tcttgttctcatgaagacaccca tgcccagctataggtttcaggta 8 9 5 1.1.2.4.5.9 BCBC-5A-0 14095391 P106810 Kcnj2 DistalPromoter P106810 DistalPromoter Unique Tile chr11:110878778-110880967 (+) NM_008425 + 1286 110882253 16518 Kcnj2 IRK1|Kcnf1|Kir2.1 potassium inwardly-rectifying channel, subfamily J, member 2 MGI:104744 Mm.4951 11 11 E2|11 68.0 cM KCNJ2 3759 NM_010604 + 38234 110840544 16517 Kcnj16 0 gggagttggactgcagactgtaa ttctgagctgctgagtggatacc 8 9 6 1.1.2.4.6.9 BCBC-5A-0 14095410 P107299 Cited2 DistalPromoter P107299 DistalPromoter Unique Tile chr10:17409171-17411182 (+) NM_010828 + 1479 17412661 17684 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 MGI:1306784 Mm.272321 10 10 A2 CITED2 10370 0 actgtgccaagtatcaggtggaa ttagcgctccgaataaggacttc 8 9 7 1.1.2.4.7.9 BCBC-5A-0 14095429 P105833 Hoxd10 DistalPromoter P105833 DistalPromoter Unique Tile chr2:74489603-74491658 (+) NM_013554 + 1128 74492786 15430 Hoxd10 AI385591|AI874987|Hox-4.5|Hox-5.3 homeo box D10 MGI:96202 Mm.24420 2 2 C3|2 45.0 cM HOXD10 3236 NM_008273 + 6372 74483231 15431 Hoxd11 0 gcacattttctgtcctcccttct acaagtgcaaggtacaaggggtt 8 9 8 1.1.2.4.8.9 BCBC-5A-0 14095448 P000805 Blank P000805 Buffer Control Negative Blank 8 9 9 1.1.2.4.9.9 BCBC-5A-0 14095467 P203376 Hkdc1 ProximalPromoter P203376 ProximalPromoter Unique Tile chr10:61817655-61818555 (-) NM_145419 - 159 61817814 216019 Hkdc1 BC016235|MGC28816 hexokinase domain containing 1 MGI:2384910 Mm.213213 10 10 B4 HKDC1 80201 NM_181423 - 26495 61845050 338359 Supv3l1 0 gaccaggacactgcttagcctta cttcttgatctggtcctccttca 8 9 10 1.1.2.4.10.9 BCBC-5A-0 14095486 P206177 Fut7 ProximalPromoter P206177 ProximalPromoter Unique Tile chr2:25244233-25245135 (+) NM_013524 + 157 25245292 14347 Fut7 AI853193|FTVII|Fuc-TVII|FucT-VII|MGC124225 fucosyltransferase 7 MGI:107692 Mm.1203 2 2 A3 FUT7 2529 NM_007379 + 5547 25250682 11305 Abca2 0 agcaggcactttccttaaaatcc gtataacgtaaggtgggcacgag 8 9 11 1.1.2.4.11.9 BCBC-5A-0 14095505 P204108 Alox12 ProximalPromoter P204108 ProximalPromoter Unique Tile chr11:70071789-70072805 (-) NM_007440 - 253 70071536 11684 Alox12 9930022G08Rik|Alox12p|P-12LO arachidonate 12-lipoxygenase MGI:87998 Mm.12286 11 11 B3|11 40.0 cM ALOX12 239 NM_173742 - 15748 70056041 52898 D11Bwg0434e 1 aggtgtgacctggaaagtctcag gtcttttctgggctgagaggaat 8 9 12 1.1.2.4.12.9 BCBC-5A-0 14095524 P203700 D130007C19Rik ProximalPromoter P203700 ProximalPromoter Unique Tile chr4:123405967-123406977 (+) NM_001002773 - 30 123405937 442805 D130007C19Rik - RIKEN cDNA D130007C19 gene MGI:3045257 4 4 D2.2 NM_019660 + 157 123407134 56309 Mycbp 0 cattcagtttgtggttgaagctg tctttggtgaggaacagaccaat 8 9 13 1.1.2.4.13.9 BCBC-5A-0 14095543 P205617 Mcpt4 ProximalPromoter P205617 ProximalPromoter Inter Repeats Tile chr14:55016633-55017669 (-) NM_010779 - 252 55016381 17227 Mcpt4 MMCP-4|MMCP-4A|MMCP-4B|Mcp-4 mast cell protease 4 MGI:96940 Mm.266575 14 14 C3|14 20.0 cM NM_008571 + 20440 54996193 17225 Mcpt2 0 caatactcagggttggtgaggtc cagggatcatggaactgttcttc 8 9 14 1.1.2.4.14.9 BCBC-5A-0 14095562 P206464 Tnk2 ProximalPromoter P206464 ProximalPromoter Unique Tile chr16:32577907-32578853 (+) NM_016788 + 14052 32592905 51789 Tnk2 ACK1|AW552477|Ack|Cdgip|MGC37479|Pyk1 tyrosine kinase, non-receptor, 2 MGI:1858308 Mm.251115 16 16 B3 TNK2 10188 NM_011638 + 49140 32528767 22042 Tfrc 2 cagcagtctaggctctccagttc cacgtatctcgctatccccatta 8 9 15 1.1.2.4.15.9 BCBC-5A-0 14095581 P201197 Axl ProximalPromoter P201197 ProximalPromoter Unique Tile chr7:25497697-25498762 (-) NM_009465 - 282 25497415 26362 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase MGI:1347244 Mm.4128 7 7 A3-B1|7 6.0 cM AXL 558 NM_028775 - 26528 25525290 74134 Cyp2s1 2 aggcttggagttgatcatcagag cctgaactctcagggtctggtaa 8 9 16 1.1.2.4.16.9 BCBC-5A-0 14095600 P208453 Zfp85-rs1 ProximalPromoter P208453 ProximalPromoter Unique Tile chr13:68277834-68278794 (+) NM_001001130 - 23597 68254237 22746 Zfp85-rs1 KRAB19|Rslcan2|Zfp71 zinc finger protein 85, related sequence 1 MGI:107767 Mm.288396 13 13 B3|13 37.0 cM NM_198322 + 34124 68312918 212569 6820416H06Rik 0 tacgtttcttttcttgtccccaa ggcaagactacatttcccacaac 8 9 17 1.1.2.4.17.9 BCBC-5A-0 14095619 P208622 Boll ProximalPromoter P208622 ProximalPromoter Unique Tile chr1:55307206-55308669 (-) NM_029267 - 808 55308014 75388 Boll 4930554P13Rik|4930597B14Rik bol, boule-like (Drosophila) MGI:1922638 Mm.293080; Mm.414047; Mm.293080; Mm.414047; Mm.293080; Mm.414047; Mm.293080; Mm.414047; Mm.293080; Mm.414047 1 1 C1 BOLL 66037 1 ttgttcttttatgggagagtggg gagaaattttgtcaggcaaaccc 8 9 18 1.1.2.4.18.9 BCBC-5A-0 14095638 P208411 Pgm2 ProximalPromoter P208411 ProximalPromoter Unique Tile chr4:99426070-99427153 (+) NM_028132 + 285 99427438 72157 Pgm2 2610020G18Rik|AA407108|AI098105|Pgm-2|Pgm1 phosphoglucomutase 2 MGI:97565 Mm.217764 4 4 C6|4 45.8 cM PGM1 5236 0 gcaactggagagaggagctgata aaaagacagaaaagccatcctcc 8 9 19 1.1.2.4.19.9 BCBC-5A-0 14095297 P100504 Sap18 ProximalPromoter P100504 ProximalPromoter Unique Tile chr14:56750816-56751861 (+) NM_009119 + 496 56752357 20220 Sap18 C530046K05Rik|D11Ertd539e|EMegR4|Sinbp1 Sin3-associated polypeptide 18 MGI:1277978 Mm.290178; Mm.30173; Mm.344671; Mm.290178; Mm.30173; Mm.344671; Mm.290178; Mm.30173; Mm.344671; Mm.290178; Mm.30173; Mm.344671; Mm.290178; Mm.30173; Mm.344671; Mm.290178; Mm.30173; Mm.344671; Mm.290178; Mm.30173; Mm.344671; Mm.290178; Mm.30173; Mm.344671; Mm.290178; Mm.30173; Mm.344671; Mm.290178; Mm.30173; Mm.344671; Mm.290178; Mm.30173; Mm.344671; Mm.290178; Mm.30173; Mm.344671 14 14 C3|14 28.5 cM SAP18 10284 NM_198605 - 28404 56780265 219114 F630043A04Rik 0 agtaaggcctggcttgtcctc cacgcaaaattcaagagaggc 8 10 1 1.1.2.4.1.10 BCBC-5A-0 14095316 P101254 Clic4 ProximalPromoter P101254 ProximalPromoter Unique Tile chr4:134545273-134546270 (-) NM_013885 - 437 134544836 29876 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) MGI:1352754 Mm.257765 4 4 D3 CLIC4 25932 0 tttagatggccccaacatcac gcctcctcggctacttctgtt 8 10 2 1.1.2.4.2.10 BCBC-5A-0 14095335 P102094 Sgol1 ProximalPromoter P102094 ProximalPromoter Unique Tile chr17:53154409-53155462 (-) NM_028232 - 168 53154241 72415 Sgol1 3300001M08Rik|C81037|MGC113769|Sgo1 shugoshin-like 1 (S. pombe) MGI:1919665 Mm.153202 17 17 C SGOL1 151648 NM_177599;NM_001037718; + 25975 53181437 211496 4932415M13Rik 0 agcaggtggatctgtttgcat gccttcccacagcctagagat 8 10 3 1.1.2.4.3.10 BCBC-5A-0 14095354 P103227 Ptger1 ProximalPromoter P103227 ProximalPromoter Unique Tile chr8:86555379-86556406 (+) NM_013641 + 338 86556744 19216 Ptger1 42kDa|EP1|Ptgerep1 prostaglandin E receptor 1 (subtype EP1) MGI:97793 Mm.213000; Mm.347482; Mm.213000; Mm.347482; Mm.213000; Mm.347482; Mm.213000; Mm.347482; Mm.213000; Mm.347482; Mm.213000; Mm.347482 8 8 C2|8 38.0 cM PTGER1 5731 NM_018771 + 12597 86542782 67903 Gipc1 0 tgttgccctgttaccctagttgt tcatcctaggtgaagagaggtgg 8 10 4 1.1.2.4.4.10 BCBC-5A-0 14095373 P103977 Lztfl1 ProximalPromoter P103977 ProximalPromoter Unique Tile chr9:123566275-123567352 (-) NM_033322 - 20 123566255 93730 Lztfl1 5530402H04Rik|6130400H19Rik|AI414725|AW048545|MGC106871 leucine zipper transcription factor-like 1 MGI:1934860 Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263; Mm.209759; Mm.237064; Mm.378263 9 9 F|9 71.1 cM LZTFL1 54585 NM_139142 - 38732 123527543 102680 Xtrp3s1 0 ccaatggaacagaattgaagacc aggaacggaggttgtttagaagc 8 10 5 1.1.2.4.5.10 BCBC-5A-0 14095392 P106910 Plat DistalPromoter P106910 DistalPromoter Unique Tile chr8:24220287-24222107 (+) NM_008872 + 1184 24223291 18791 Plat AU020998|AW212668|D8Ertd2e|MGC18508|t-PA|tPA plasminogen activator, tissue MGI:97610 Mm.154660 8 8 A2|8 9.0 cM PLAT 5327 NM_010546 - 48179 24172108 16150 Ikbkb 0 aaagagcaaacttcctggtgtcc ctccaaagggctccaagtacaat 8 10 6 1.1.2.4.6.10 BCBC-5A-0 14095411 P107321 Furin DistalPromoter P107321 DistalPromoter Unique Tile chr7:80277784-80279847 (-) NM_011046 - 1509 80276275 18550 Furin Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) MGI:97513 Mm.5241 7 7 D1-E2|7 39.0 cM FURIN 5045 NM_010194 - 16879 80260905 14159 Fes 0 tgatccttggttcaccttgtcat ttaggggaaatagggacagggtt 8 10 7 1.1.2.4.7.10 BCBC-5A-0 14095430 P105855 Tcp11 DistalPromoter P105855 DistalPromoter Unique Tile chr17:27809446-27811933 (-) NM_013687 - 1290 27808156 21463 Tcp11 D17Ken1|MGC107229|Tcp-11 t-complex protein 11 MGI:98544 Mm.29758 17 17 A3-B|17 14.35 cM TCP11 6954 0 tttccataaactggtggtgacct ggttcagttccaatactgcaagg 8 10 8 1.1.2.4.8.10 BCBC-5A-0 14095449 P000901 Blank P000901 Buffer Control Negative Blank 8 10 9 1.1.2.4.9.10 BCBC-5A-0 14095468 P203310 Kctd10 ProximalPromoter P203310 ProximalPromoter Unique Tile chr5:114641698-114642758 (-) NM_026145 - 213 114641485 330171 Kctd10 AW536343|C87062|MGC11654 potassium channel tetramerisation domain containing 10 MGI:2141207 Mm.238285 5 5 F KCTD10 83892 NM_054093 + 69 114641629 117146 Ube3b 1 ttaactaggcctccctttggaag tctcctttccgtctgctaaagaa 8 10 10 1.1.2.4.10.10 BCBC-5A-0 14095487 P206201 ProximalPromoter P206201 ProximalPromoter Unique Tile chr15:7036675-7037724 (+) 0 ctgggaattcatcagaaaagtgg ctatgcaaaacaaaactcctggg 8 10 11 1.1.2.4.11.10 BCBC-5A-0 14095506 P204133 Arntl ProximalPromoter P204133 ProximalPromoter Unique Tile chr7:112997734-112998733 (+) NM_007489 + 27 112998706 11865 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bmal1b' aryl hydrocarbon receptor nuclear translocator-like MGI:1096381 Mm.12177 7 7 F2-F3|7 52.0 cM ARNTL 406 NM_177248 + 32201 113030934 320743 A630005I04Rik 1 ctttcccgctcctttgatacttt gtccctgacctactttctgcctt 8 10 12 1.1.2.4.12.10 BCBC-5A-0 14095525 P203724 Lrsam1 ProximalPromoter P203724 ProximalPromoter Unique Tile chr2:32783190-32784287 (-) NM_199302 - 70 32783260 227738 Lrsam1 MGC56830 leucine rich repeat and sterile alpha motif containing 1 MGI:2684789 Mm.248037 2 2 B LRSAM1 90678 NM_009076 + 544 32783734 269261 Rpl12 1 tatctcagttttcctttgcgtcc tcaaacatagaagtgagcaccga 8 10 13 1.1.2.4.13.10 BCBC-5A-0 14095544 P205343 Dnmt1 ProximalPromoter P205343 ProximalPromoter Unique Tile chr9:20703476-20704569 (-) NM_010066 - 201 20703275 13433 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MTase|Met-1|Met1 DNA methyltransferase (cytosine-5) 1 MGI:94912 Mm.128580 9 9 A3|9 5.0 cM DNMT1 1786 NM_010333 - 22523 20727092 14739 Edg5 0 catttctctgcgatctgcttttt agaggatgactctggtttgcttg 8 10 14 1.1.2.4.14.10 BCBC-5A-0 14095563 P206488 Hif3a ProximalPromoter P206488 ProximalPromoter End Repeat Tile chr7:16221077-16222010 (-) NM_016868 - 5876 16215201 53417 Hif3a Ipas|MOP7 hypoxia inducible factor 3, alpha subunit MGI:1859778 Mm.135110 7 7 A2 HIF3A 64344 NM_007676 + 10551 16232561 26436 Psg16 1 gtgtgtgtgtgtgtgtgtgtgtg gaagacttggaacttcaaggggt 8 10 15 1.1.2.4.15.10 BCBC-5A-0 14095582 P201222 ProximalPromoter P201222 ProximalPromoter No Hits Tile 0 cacaaccaccctatgccatttat tctcatttgaccgaagaagtgct 8 10 16 1.1.2.4.16.10 BCBC-5A-0 14095601 P208477 Thoc3 ProximalPromoter P208477 ProximalPromoter Unique Tile chr13:54478534-54479695 (-) NM_028597 - 93 54478441 73666 Thoc3 2410044K02Rik|AL033344 THO complex 3 MGI:1920916 Mm.292487; Mm.393755; Mm.292487; Mm.393755; Mm.292487; Mm.393755; Mm.292487; Mm.393755; Mm.292487; Mm.393755; Mm.292487; Mm.393755 13 13 B2 THOC3 84321 1 ggatatattcctctggtgtcccc ctctcactcgcggaactacaaat 8 10 17 1.1.2.4.17.10 BCBC-5A-0 14095620 P208556 Ctbs ProximalPromoter P208556 ProximalPromoter Unique Tile chr3:146386670-146387637 (+) NM_028836 + 241 146387878 74245 Ctbs 2210401K11Rik|CTB chitobiase, di-N-acetyl- MGI:1921495 Mm.45396 3 3 H3 CTBS 1486 NM_138744 + 44598 146342072 99167 Ssx2ip 0 acgaagacaagaaagcaaacctg atgtgacaggggtcttccttaca 8 10 18 1.1.2.4.18.10 BCBC-5A-0 14095639 P208435 2700078K21Rik ProximalPromoter P208435 ProximalPromoter Unique Tile chr7:141870543-141871449 (-) NM_028308 - 119 141870424 101513 2700078K21Rik 1110017M21Rik|AI256456|Mmh RIKEN cDNA 2700078K21 gene MGI:1919891 Mm.53259 7 7 F5 HCCA2 81532 NM_008748 - 28211 141899660 18218 Dusp8 0 aggttgttgtgatccttctgctc ctgttctggagtgtcaggacctt 8 10 19 1.1.2.4.19.10 BCBC-5A-0 14095298 P100528 Slc2a4 ProximalPromoter P100528 ProximalPromoter Unique Tile chr11:69764340-69765343 (-) NM_009204 - 4 69764344 20528 Slc2a4 Glut-4|Glut4 solute carrier family 2 (facilitated glucose transporter), member 4 MGI:95758 Mm.10661 11 11 C-E1|11 40.0 cM SLC2A4 6517 NM_016875 + 12171 69752169 53422 Ybx2 0 agagccaccccagaagttagc aaggctctccgggatctagtg 8 11 1 1.1.2.4.1.11 BCBC-5A-0 14095317 P101278 ProximalPromoter P101278 ProximalPromoter No Hits Tile 0 actaagcacagcgtagcctgg gtggatgtctgagttcagggc 8 11 2 1.1.2.4.2.11 BCBC-5A-0 14095336 P102411 Anpep ProximalPromoter P102411 ProximalPromoter Unique Tile chr7:79716171-79717072 (-) NM_008486 - 306 79715865 16790 Anpep Apn|Cd13|Lap-1|Lap1|p150 alanyl (membrane) aminopeptidase MGI:96749 Mm.4487 7 7 D2 ANPEP 290 NM_008589 + 31923 79684248 17293 Mesp2 0 aggcaaaggaccataggtagagg tacctgcaaggagaaatggagag 8 11 3 1.1.2.4.3.11 BCBC-5A-0 14095355 P103251 Peg12 ProximalPromoter P103251 ProximalPromoter Unique Tile chr7:62353908-62354872 (+) NM_013788 - 10448 62343460 27412 Peg12 Frat3 paternally expressed 12 MGI:1351637 Mm.422745; Mm.90135; Mm.422745; Mm.90135 7 7 C|7 28.0 cM 0 cctagggtttctatctccagcgt ccactccctgtgagacacttctt 8 11 4 1.1.2.4.4.11 BCBC-5A-0 14095374 P104001 2900010M23Rik ProximalPromoter P104001 ProximalPromoter Unique Tile chr17:26842247-26843171 (+) NM_026063 - 19233 26861480 67267 2900010M23Rik - RIKEN cDNA 2900010M23 gene MGI:1914517 Mm.272389 17 17 B1 C6orf125 84300 0 tcaccctcttcttgtatccctga gaatattccagacctgctccaga 8 11 5 1.1.2.4.5.11 BCBC-5A-0 14095393 P106932 Ptdss1 DistalPromoter P106932 DistalPromoter Unique Tile chr13:67365976-67368051 (+) NM_008959 + 527 67368578 19210 Ptdss1 AU044268|AW539008|PSS-1|mKIAA0024 phosphatidylserine synthase 1 MGI:1276575 Mm.281464 13 13 B-C1 PTDSS1 9791 NM_025547 - 728 67368779 66410 Mterfd1 0 caaaggaaaaacacacccatcaa agtgcactggcaagtaaaagtgg 8 11 6 1.1.2.4.6.11 BCBC-5A-0 14095412 P107263 Jun DistalPromoter P107263 DistalPromoter Unique Tile chr4:94545038-94547048 (-) NM_010591 - 833 94544205 16476 Jun AP-1|Junc|c-jun Jun oncogene MGI:96646 Mm.275071 4 4 C5-C7|4 44.6 cM JUN 3725 0 gggtgttttcagctgattcctct cggcacaacactttattctctgg 8 11 7 1.1.2.4.7.11 BCBC-5A-0 14095431 P105876 Dbp DistalPromoter P105876 DistalPromoter Unique Tile chr7:45570393-45572342 (+) NM_016974 + 931 45573273 13170 Dbp - D site albumin promoter binding protein MGI:94866 Mm.378235 7 7 B3|7 23.0 cM DBP 1628 NM_009800 + 2346 45568047 12348 Car11 0 atcgttggacttggggaataaga agaggatatggtcttctgggctg 8 11 8 1.1.2.4.8.11 BCBC-5A-0 14095450 P000997 Blank P000997 Buffer Control Negative Blank 8 11 9 1.1.2.4.9.11 BCBC-5A-0 14095469 P203334 Tob2 ProximalPromoter P203334 ProximalPromoter Unique Tile chr15:81679622-81680580 (-) NM_020507 - 222 81679400 57259 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 MGI:1888525 Mm.323595 15 15 E2 TOB2 10766 NM_026737 - 18567 81699147 68479 Phf5a 0 aaattcagccctgagtctcacac gcaatgtcttcatcaagttgtgc 8 11 10 1.1.2.4.10.11 BCBC-5A-0 14095488 P201650 ProximalPromoter P201650 ProximalPromoter Unique Tile chr13:105564855-105565845 (+) 0 agcctgacaacctgagttcaatc cagagacccagacaacaggaact 8 11 11 1.1.2.4.11.11 BCBC-5A-0 14095507 P204157 Bcap29 ProximalPromoter P204157 ProximalPromoter Unique Tile chr12:32220253-32221345 (-) NM_007530 - 409 32219844 12033 Bcap29 AW208404|Bap29 B-cell receptor-associated protein 29 MGI:101917 Mm.242379 12 12 A3|12 17.0 cM BCAP29 55973 NM_028002 - 18664 32240009 71916 Dus4l 1 agggtttctctgtatagccctgg ggaactgctgggtctactccttt 8 11 12 1.1.2.4.12.11 BCBC-5A-0 14095526 P203748 Hsd3b7 ProximalPromoter P203748 ProximalPromoter Unique Tile chr7:127576816-127577843 (+) NM_001040684;NM_133943; + 13913 127591756 101502 Hsd3b7 AI195443|BB098564 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 MGI:2141879 Mm.157103 7 7 F3 HSD3B7 80270 NM_198424 + 15824 127560992 269999 Tmem142c 1 gtagcacctacagggagtggaga tacccagcactagacctcctcac 8 11 13 1.1.2.4.13.11 BCBC-5A-0 14095545 P205367 Emp1 ProximalPromoter P205367 ProximalPromoter Unique Tile chr6:135327809-135328818 (+) NM_010128 + 195 135328623 13730 Emp1 TMP epithelial membrane protein 1 MGI:107941 Mm.182785 6 6 G1|6 65.0 cM EMP1 2012 0 aacctctttagggaggtgaccag ctccagtgtggggacaatcttac 8 11 14 1.1.2.4.14.11 BCBC-5A-0 14095564 P206421 Park2 ProximalPromoter P206421 ProximalPromoter Unique Tile chr17:10682778-10683769 (+) NM_016694 + 11 10683758 50873 Park2 MGC130518|PRKN parkin MGI:1355296 Mm.311110 17 17 5.91 cM PARK2 5071 NM_027032 - 225 10683544 69310 Pacrg 0 agcattcactccagaaggtcttg accagcgtttctgtcaggtttag 8 11 15 1.1.2.4.15.11 BCBC-5A-0 14095583 P201246 Gpr82 ProximalPromoter P201246 ProximalPromoter Unique Tile chrX:12817497-12818425 (+) NM_175669 + 99 12818326 319200 Gpr82 - G protein-coupled receptor 82 MGI:2441734 Mm.383294 X X A1.1 GPR82 27197 NM_011823 + 27748 12789749 23890 Gpr34 0 tctcacttgagtcgtttcttccc ccaagtccacctcatttgcttac 8 11 16 1.1.2.4.16.11 BCBC-5A-0 14095602 P208501 3930401K13Rik ProximalPromoter P208501 ProximalPromoter Unique Tile chr16:4965021-4966111 (-) NM_028720 - 144 4965165 74022 3930401K13Rik 2810419J22Rik|AW545332|Npac RIKEN cDNA 3930401K13 gene Mm.21652 16 16 A1|16 3.4 cM NM_026666 + 367 4965388 170644 Ubn1 1 actacttacgaaggctaacgcgg cgtccggagtgcataataaaact 8 11 17 1.1.2.4.17.11 BCBC-5A-0 14095621 P208580 Snx11 ProximalPromoter P208580 ProximalPromoter Unique Tile chr11:96593596-96594544 (-) NM_028965 - 14 96593610 74479 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 MGI:1921729 Mm.270781 11 11 D SNX11 29916 NM_007622 + 10704 96605248 12412 Cbx1 0 gcttttcgtttgtgttttccaac tatagtccgataccggcttctcc 8 11 18 1.1.2.4.18.11 BCBC-5A-0 14095640 P001548 Blank P001548 Buffer Control Negative Blank 8 11 19 1.1.2.4.19.11 BCBC-5A-0 14095299 P100552 Ss18 ProximalPromoter P100552 ProximalPromoter Unique Tile chr18:14826211-14827147 (-) NM_009280 - 279 14825932 268996 Ss18 D130059H17|Ssxt|Syt synovial sarcoma translocation, Chromosome 18 MGI:107708 Mm.31761 18 18 B1 SS18 6760 0 agcaccttaccagatgagcca agagggaaagaggacagtcgg 8 12 1 1.1.2.4.1.12 BCBC-5A-0 14095318 P101302 Mink1 ProximalPromoter P101302 ProximalPromoter Unique Tile chr11:70377743-70378785 (+) NM_176893;NM_016713; + 307 70379092 50932 Mink1 B55|MINK|Map4k6|Ysk2 misshapen-like kinase 1 (zebrafish) MGI:1355329 Mm.42967 11 11 B4 MINK1 50488 NM_008876 + 21206 70356537 18806 Pld2 0 aaggcagtgggagtcatcaaa agctgccaatcaaaccaccta 8 12 2 1.1.2.4.2.12 BCBC-5A-0 14095337 P102435 Mnat1 ProximalPromoter P102435 ProximalPromoter Unique Tile chr12:74041239-74042148 (+) NM_008612 + 406 74042554 17420 Mnat1 E130115E11Rik|MAT1|P36 menage a trois 1 MGI:106207 Mm.246750 12 12 C3 MNAT1 4331 NM_011382 - 9156 74032083 20474 Six4 0 acaggcagggttacacagagaag taccagcactaggaaggctgaag 8 12 3 1.1.2.4.3.12 BCBC-5A-0 14095356 P103185 Adrb3 ProximalPromoter P103185 ProximalPromoter Unique Tile chr8:28694458-28695411 (-) NM_013462 - 1066 28695524 11556 Adrb3 Adrb-3 adrenergic receptor, beta 3 MGI:87939 Mm.278475 8 8 A2-A4|8 10.0 cM ADRB3 155 NM_029674 - 25975 28668483 76615 Got1l1 1 ctagacagcctcaaatgcatcct atcttccctaattgctggggtaa 8 12 4 1.1.2.4.4.12 BCBC-5A-0 14095375 P104025 Cyp4v3 ProximalPromoter P104025 ProximalPromoter Unique Tile chr8:46831959-46832932 (-) NM_133969 - 54 46832013 102294 Cyp4v3 AU043077|AW111961 cytochrome P450, family 4, subfamily v, polypeptide 3 MGI:2142763 Mm.245297 8 8 B1.1 CYP4V2 285440 NM_008455 - 24676 46807283 16621 Klkb1 0 tttcaactttcttggcactctcc ctctggagctgggaaaatctgta 8 12 5 1.1.2.4.5.12 BCBC-5A-0 14095394 P106953 Rag1ap1 DistalPromoter P106953 DistalPromoter Unique Tile chr3:89357585-89359777 (-) NM_009057 - 1100 89356485 19729 Rag1ap1 Rga recombination activating gene 1 activating protein 1 MGI:107417 Mm.17958 3 3 F1|3 44.3 cM RAG1AP1 55974 NM_026767 + 5020 89352565 68563 Dpm3 0 gaaggagagaatttgctttccca tgcttctgtttagcacagagcct 8 12 6 1.1.2.4.6.12 BCBC-5A-0 14095413 P107285 Lepr DistalPromoter P107285 DistalPromoter Unique Tile chr4:101211951-101214150 (+) NM_146146;NM_010704; + 1220 101215370 16847 Lepr LEPROT|MGC105189|OB-RGRP|Obr|db|diabetes|obese-like|obl leptin receptor MGI:104993 Mm.259282 4 4 C6|4 46.7 cM LEPR 3953 0 tatttgttccccggtgtttcttt caaggaaaagtgcagacctcaaa 8 12 7 1.1.2.4.7.12 BCBC-5A-0 14095432 P105567 D630003M21Rik DistalPromoter P105567 DistalPromoter Unique Tile chr2:157905776-157907784 (-) NM_177657 - 14887 157920663 228846 D630003M21Rik - RIKEN cDNA D630003M21 gene MGI:3606579 Mm.187574 2 2 H1 RP5-1054A22.3 85449 NM_177850 + 41897 157949681 329547 Bpi 0 cactctcagggggctaaagacat tcagagcaacacagctctaaccc 8 12 8 1.1.2.4.8.12 BCBC-5A-0 14095451 P001093 Blank P001093 Buffer Control Negative Blank 8 12 9 1.1.2.4.9.12 BCBC-5A-0 14095470 P203358 Rtkn ProximalPromoter P203358 ProximalPromoter Unique Tile chr6:83101686-83102750 (+) NM_009106;NM_133641; + 4 83102746 20166 Rtkn - rhotekin MGI:107371 Mm.4139 6 6 C3|6 34.81 cM RTKN 6242 NM_023547 - 10953 83090733 70020 Znhit4 0 tccgacttagtttcttcagcgag tgacaaaaccctccactctcttc 8 12 10 1.1.2.4.10.12 BCBC-5A-0 14095489 P201675 Tmem69 ProximalPromoter P201675 ProximalPromoter Unique Tile chr4:116053776-116054716 (-) NM_177670 - 83 116053859 230657 Tmem69 A630048M13Rik|MGC118424 transmembrane protein 69 MGI:3045357 Mm.291484 4 4 D1 TMEM69 51249 NM_029868 + 942 116055658 77110 Gpbp1l1 0 gctttttacacaaggagccaaga agtgtacccttgacaaccctgaa 8 12 11 1.1.2.4.11.12 BCBC-5A-0 14095508 P204089 Adam8 ProximalPromoter P204089 ProximalPromoter Unique Tile chr7:139843944-139844952 (-) NM_007403 - 89 139843855 11501 Adam8 CD156|CD156a|E430039A18Rik|MS2 a disintegrin and met